Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0819190 | GAU18180.1 | 82.143 | 364 | 23 | 2 | 1 | 322 | 1 | 364 | 0.0 | 592 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0819190 | sp|P49572|TRPC_ARATH | 59.509 | 326 | 88 | 4 | 41 | 322 | 49 | 374 | 7.93e-128 | 374 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0819190 | A0A2Z6M013 | 82.143 | 364 | 23 | 2 | 1 | 322 | 1 | 364 | 0.0 | 592 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0783520 | Msa0819190 | 0.837175 | 6.069815e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0819190 | MtrunA17_Chr5g0438151 | 82.967 | 364 | 20 | 2 | 1 | 322 | 1 | 364 | 0.0 | 592 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0819190 | AT5G48220.1 | 61.254 | 351 | 85 | 6 | 14 | 322 | 11 | 352 | 1.82e-143 | 410 |
| Msa0819190 | AT5G48220.3 | 65.064 | 312 | 66 | 3 | 53 | 322 | 27 | 337 | 5.66e-142 | 405 |
| Msa0819190 | AT5G48220.4 | 66.436 | 289 | 55 | 2 | 76 | 322 | 1 | 289 | 1.47e-136 | 390 |
| Msa0819190 | AT5G48220.2 | 66.436 | 289 | 55 | 2 | 76 | 322 | 1 | 289 | 1.47e-136 | 390 |
| Msa0819190 | AT2G04400.1 | 59.509 | 326 | 88 | 4 | 41 | 322 | 49 | 374 | 8.06e-129 | 374 |
Find 93 sgRNAs with CRISPR-Local
Find 455 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAGGGAAGCTTTGAAAATT+TGG | 0.165193 | 5_3:-55319259 | Msa0819190:intron |
| CAAGAAGTGTTGTTGTTAAA+AGG | 0.204047 | 5_3:+55322536 | None:intergenic |
| GTTTAGATGGTTGGGGAATC+TGG | 0.267921 | 5_3:-55318188 | Msa0819190:intron |
| TTCTCCTTATTCTTATACCT+TGG | 0.277135 | 5_3:+55321587 | None:intergenic |
| AGGGAATTCGATCGTGTTCT+TGG | 0.315417 | 5_3:-55318511 | Msa0819190:CDS |
| AGTTGGAGGAATAGTGGTTC+TGG | 0.317340 | 5_3:+55322348 | None:intergenic |
| CTACCCAAGGTATAAGAATA+AGG | 0.335290 | 5_3:-55321591 | Msa0819190:CDS |
| TGAAAATGCACCTCCTGTTC+GGG | 0.336397 | 5_3:-55321314 | Msa0819190:CDS |
| ATGGATATGTTTAGATGGTT+GGG | 0.336646 | 5_3:-55318196 | Msa0819190:intron |
| AAGGACTGCATCTGCACCTT+TGG | 0.337273 | 5_3:+55319054 | None:intergenic |
| AAAGGTCCTACATAATGATT+AGG | 0.338327 | 5_3:+55321547 | None:intergenic |
| TTGAAAATGCACCTCCTGTT+CGG | 0.344054 | 5_3:-55321315 | Msa0819190:CDS |
| TGTTGTTGTTAAAAGGAAAC+AGG | 0.352579 | 5_3:+55322543 | None:intergenic |
| AAGAAAGAAAACCCTTCTTA+TGG | 0.356663 | 5_3:-55321350 | Msa0819190:CDS |
| TTCTGGTTCAAACATTGAAC+TGG | 0.357536 | 5_3:+55322631 | None:intergenic |
| AGGAATAGTGGTTCTGGGAT+TGG | 0.374224 | 5_3:+55322354 | None:intergenic |
| TCTCCTTATTCTTATACCTT+GGG | 0.386336 | 5_3:+55321588 | None:intergenic |
| TATGGATATGTTTAGATGGT+TGG | 0.386602 | 5_3:-55318197 | Msa0819190:intron |
| TATTTCCCTCGTTCTGCAAC+CGG | 0.387527 | 5_3:+55321518 | None:intergenic |
| AATCAAGGATTCCATTGAAA+AGG | 0.396547 | 5_3:+55322417 | None:intergenic |
| GGAATCAACAATCGTAATCT+TGG | 0.405503 | 5_3:-55318466 | Msa0819190:intron |
| GTTGGAGGAATAGTGGTTCT+GGG | 0.405718 | 5_3:+55322349 | None:intergenic |
| AAGGTCCTACATAATGATTA+GGG | 0.406698 | 5_3:+55321548 | None:intergenic |
| TAATGAACGAACTGGATTGC+CGG | 0.409949 | 5_3:-55321266 | Msa0819190:CDS |
| GTAAAACAGCGGCAATTAGA+AGG | 0.423033 | 5_3:+55319035 | None:intergenic |
| TTGGAGTTAATAAGAAATGC+TGG | 0.428736 | 5_3:-55319240 | Msa0819190:CDS |
| GACTTGAGTTGGAGGAATAG+TGG | 0.436368 | 5_3:+55322342 | None:intergenic |
| CGATCGTGTTCTTGGAATAG+AGG | 0.438551 | 5_3:-55318503 | Msa0819190:CDS |
| GTTACCCTTGAGAGAAATCA+AGG | 0.441183 | 5_3:+55322402 | None:intergenic |
| ACCACGAAGAAGCTTCTTGA+AGG | 0.446760 | 5_3:-55318327 | Msa0819190:CDS |
| TCCTTCAAGAAGCTTCTTCG+TGG | 0.451429 | 5_3:+55318326 | None:intergenic |
| GGTTGAAGCTCTCAAAGTTA+AGG | 0.456983 | 5_3:-55321650 | Msa0819190:CDS |
| AGAAAACCCTTCTTATGGTT+AGG | 0.458363 | 5_3:-55321345 | Msa0819190:CDS |
| ATTGTAGCCGAACCTTCATT+AGG | 0.459178 | 5_3:+55321694 | None:intergenic |
| TGAACGACAATCTGTGAAAT+CGG | 0.460025 | 5_3:-55322602 | Msa0819190:five_prime_UTR |
| ATAGAGGGCGTTGAGCTCAT+TGG | 0.461415 | 5_3:-55318487 | Msa0819190:CDS |
| TGAATTCTTTGCACAACAAA+GGG | 0.461733 | 5_3:+55319110 | None:intergenic |
| AATAAGAAATGCTGGAGTAA+AGG | 0.463960 | 5_3:-55319232 | Msa0819190:intron |
| GTTAAGATATGCAAATTACT+TGG | 0.466429 | 5_3:-55318989 | Msa0819190:CDS |
| GATATGCAAATTACTTGGAC+TGG | 0.466507 | 5_3:-55318984 | Msa0819190:CDS |
| CTATAAGTATTGACTTGAGT+TGG | 0.466810 | 5_3:+55322331 | None:intergenic |
| AAGAATTCATTATAGATGCT+TGG | 0.471977 | 5_3:-55319096 | Msa0819190:CDS |
| AGTAGGAATGTTTCATAATG+AGG | 0.474718 | 5_3:-55321620 | Msa0819190:CDS |
| GGCGGAGCCTAATGAAGGTT+CGG | 0.479822 | 5_3:-55321701 | Msa0819190:CDS |
| TTCTGCAACCGGAATTGAAA+AGG | 0.484408 | 5_3:+55321529 | None:intergenic |
| GCCCCAATAAAATCCCGAAC+AGG | 0.484947 | 5_3:+55321301 | None:intergenic |
| GGAATCCTTGATTTCTCTCA+AGG | 0.486941 | 5_3:-55322407 | Msa0819190:CDS |
| AGGGCAGCTAATGAACGAAC+TGG | 0.487175 | 5_3:-55321274 | Msa0819190:CDS |
| AGCTCTCAAAGTTAAGGAAT+GGG | 0.487529 | 5_3:-55321644 | Msa0819190:CDS |
| GATTCCATTGAAAAGGGTAA+TGG | 0.491463 | 5_3:+55322424 | None:intergenic |
| AATGAACGAACTGGATTGCC+GGG | 0.495625 | 5_3:-55321265 | Msa0819190:CDS |
| ATGAATTCTTTGCACAACAA+AGG | 0.499202 | 5_3:+55319109 | None:intergenic |
| AAGCTCTCAAAGTTAAGGAA+TGG | 0.499434 | 5_3:-55321645 | Msa0819190:CDS |
| ATCAAGGATTCCATTGAAAA+GGG | 0.501399 | 5_3:+55322418 | None:intergenic |
| ATAAGGAGAAGACCACCAAC+TGG | 0.508374 | 5_3:-55321574 | Msa0819190:CDS |
| GATTAGGCGGAGCCTAATGA+AGG | 0.513132 | 5_3:-55321706 | Msa0819190:intron |
| TCGGCTACAATAGCCACATC+TGG | 0.513917 | 5_3:-55321682 | Msa0819190:CDS |
| TCTCTCAAGATGCCTCTACT+TGG | 0.515966 | 5_3:+55321214 | None:intergenic |
| TAAGTATTGACTTGAGTTGG+AGG | 0.516113 | 5_3:+55322334 | None:intergenic |
| CTCTACTATGCTCGATCCAA+AGG | 0.519675 | 5_3:-55319070 | Msa0819190:CDS |
| GGGCCTTCCTAACCATAAGA+AGG | 0.519948 | 5_3:+55321338 | None:intergenic |
| ACAACACAACATAACCTCTT+CGG | 0.521063 | 5_3:-55322497 | Msa0819190:five_prime_UTR |
| AAAGTTAAGGAATGGGAAGT+AGG | 0.522034 | 5_3:-55321637 | Msa0819190:CDS |
| AACCCTTCTTATGGTTAGGA+AGG | 0.523675 | 5_3:-55321341 | Msa0819190:CDS |
| ATGTATTTGATGTCAAGATC+AGG | 0.527017 | 5_3:+55319013 | None:intergenic |
| TTGACTTCAGCAATCAATCC+CGG | 0.531405 | 5_3:+55321247 | None:intergenic |
| TGGATATGTTTAGATGGTTG+GGG | 0.532058 | 5_3:-55318195 | Msa0819190:intron |
| ATTGCTTATGTACAAGAAGC+AGG | 0.536943 | 5_3:-55318146 | Msa0819190:CDS |
| TAATGTAGGTGCACGATGAG+AGG | 0.569999 | 5_3:-55318531 | Msa0819190:intron |
| TGTACATAAGCAATGTCTGC+AGG | 0.570301 | 5_3:+55318155 | None:intergenic |
| GGCCTTCCTAACCATAAGAA+GGG | 0.572417 | 5_3:+55321339 | None:intergenic |
| TCAATTCCGGTTGCAGAACG+AGG | 0.575802 | 5_3:-55321524 | Msa0819190:CDS |
| GATCGTGTTCTTGGAATAGA+GGG | 0.577340 | 5_3:-55318502 | Msa0819190:CDS |
| CCAATAAAATCCCGAACAGG+AGG | 0.579688 | 5_3:+55321304 | None:intergenic |
| ATTGATTGCTGAAGTCAAGA+AGG | 0.582300 | 5_3:-55321242 | Msa0819190:CDS |
| AATGTAGGTGCACGATGAGA+GGG | 0.584902 | 5_3:-55318530 | Msa0819190:intron |
| AATGAGGTTGCTGCTACCCA+AGG | 0.588159 | 5_3:-55321604 | Msa0819190:CDS |
| TTGTGTTGTTACATTTACAA+AGG | 0.591028 | 5_3:+55322511 | None:intergenic |
| GTTCAAACATTGAACTGGGT+AGG | 0.591848 | 5_3:+55322636 | None:intergenic |
| CAATTCCGGTTGCAGAACGA+GGG | 0.593820 | 5_3:-55321523 | Msa0819190:CDS |
| TGATCTTGACATCAAATACA+TGG | 0.599333 | 5_3:-55319011 | Msa0819190:CDS |
| TGGACTGGCAGCTCTTGTTG+AGG | 0.600595 | 5_3:-55318969 | Msa0819190:intron |
| TGGGATTGGAAGAGAACGAA+GGG | 0.606231 | 5_3:+55322368 | None:intergenic |
| AACCACAGATTCACCAGATG+TGG | 0.614744 | 5_3:+55321669 | None:intergenic |
| TCTGGTTCAAACATTGAACT+GGG | 0.620435 | 5_3:+55322632 | None:intergenic |
| GAATCCTTGATTTCTCTCAA+GGG | 0.623977 | 5_3:-55322406 | Msa0819190:CDS |
| AAGAAGGCTTCACCAAGTAG+AGG | 0.628444 | 5_3:-55321226 | Msa0819190:CDS |
| AAGCTTCTTGAAGGAGAGCG+AGG | 0.630844 | 5_3:-55318318 | Msa0819190:CDS |
| GGTCCTACATAATGATTAGG+GGG | 0.633768 | 5_3:+55321550 | None:intergenic |
| AGCCACATCTGGTGAATCTG+TGG | 0.650573 | 5_3:-55321671 | Msa0819190:CDS |
| AGGTCCTACATAATGATTAG+GGG | 0.661433 | 5_3:+55321549 | None:intergenic |
| CTGGGATTGGAAGAGAACGA+AGG | 0.670959 | 5_3:+55322367 | None:intergenic |
| GTCAAGATCAGGTAAAACAG+CGG | 0.709047 | 5_3:+55319024 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACATTATATAAAACAAAAA+GGG | + | chr5_3:55316535-55316554 | None:intergenic | 10.0% |
| !! | AAACATTATATAAAACAAAA+AGG | + | chr5_3:55316536-55316555 | None:intergenic | 10.0% |
| !!! | TGTTTTATATAATGTTTTTT+TGG | - | chr5_3:55316539-55316558 | Msa0819190:intron | 10.0% |
| !! | TAACTATAAAAATTTGTATA+AGG | + | chr5_3:55320495-55320514 | None:intergenic | 10.0% |
| !!! | TTTTTTGTTGTATATTTATC+TGG | - | chr5_3:55316219-55316238 | Msa0819190:intron | 15.0% |
| !!! | ATAATGTTTTTGTGATTATT+TGG | - | chr5_3:55316368-55316387 | Msa0819190:intron | 15.0% |
| !!! | TTGATGCATATTATTTTTTT+TGG | - | chr5_3:55316494-55316513 | Msa0819190:intron | 15.0% |
| !!! | TTTTTTTTGGTTTAATTTTG+AGG | - | chr5_3:55316507-55316526 | Msa0819190:intron | 15.0% |
| !!! | ATTTTTTGTATTTAATTGAG+AGG | - | chr5_3:55316668-55316687 | Msa0819190:intron | 15.0% |
| !! | AATATGATCAAAATCAAAAA+GGG | + | chr5_3:55316696-55316715 | None:intergenic | 15.0% |
| !! | AAATATGATCAAAATCAAAA+AGG | + | chr5_3:55316697-55316716 | None:intergenic | 15.0% |
| !!! | TTTGATTTTGATCATATTTT+TGG | - | chr5_3:55316698-55316717 | Msa0819190:intron | 15.0% |
| !!! | TTGATTTTGATCATATTTTT+GGG | - | chr5_3:55316699-55316718 | Msa0819190:intron | 15.0% |
| !! | TTAATGTAAATATGAACTTA+TGG | - | chr5_3:55317798-55317817 | Msa0819190:intron | 15.0% |
| !!! | AAGTTTATTTTGTATAGTTA+CGG | + | chr5_3:55319716-55319735 | None:intergenic | 15.0% |
| !! | TGTCTTAATATTTATACTTA+AGG | - | chr5_3:55320026-55320045 | Msa0819190:intron | 15.0% |
| !! | ACTTTAAACTAATGATTATA+TGG | - | chr5_3:55320228-55320247 | Msa0819190:intron | 15.0% |
| !!! | TATTTTTGTGAACATAATTA+AGG | + | chr5_3:55321810-55321829 | None:intergenic | 15.0% |
| !! | TTAATTATGTTCACAAAAAT+AGG | - | chr5_3:55321809-55321828 | Msa0819190:intron | 15.0% |
| !! | AATATAAAGATATTAGTGAA+AGG | - | chr5_3:55322060-55322079 | Msa0819190:intron | 15.0% |
| !!! | GATTTGTTATTTTGTTTGTA+TGG | + | chr5_3:55315881-55315900 | None:intergenic | 20.0% |
| !! | AACAATAAAGCAATACAAAA+AGG | + | chr5_3:55316201-55316220 | None:intergenic | 20.0% |
| !!! | TTTCTCTCATTTTTCTTTTT+GGG | - | chr5_3:55316243-55316262 | Msa0819190:intron | 20.0% |
| !!! | ATTATTTGGTGTTATGATTA+TGG | - | chr5_3:55316382-55316401 | Msa0819190:intron | 20.0% |
| !!! | ATTATTTGCTGTTTTGATTA+AGG | - | chr5_3:55316562-55316581 | Msa0819190:intron | 20.0% |
| !!! | GATTATTTGATGTTTTGATT+AGG | - | chr5_3:55316721-55316740 | Msa0819190:intron | 20.0% |
| !! | AAAGGAATAGTTAAATAATC+TGG | + | chr5_3:55317577-55317596 | None:intergenic | 20.0% |
| !! | AGTTCATATTTACATTAACT+GGG | + | chr5_3:55317796-55317815 | None:intergenic | 20.0% |
| !! | AAGTTCATATTTACATTAAC+TGG | + | chr5_3:55317797-55317816 | None:intergenic | 20.0% |
| !! | TAAAAAAGAAAAAACAGAAC+AGG | + | chr5_3:55318012-55318031 | None:intergenic | 20.0% |
| !!! | TGTTATTAAGTCGATTATTT+TGG | - | chr5_3:55318042-55318061 | Msa0819190:intron | 20.0% |
| !!! | GTTTGTTTTGTGAAATTTTA+AGG | + | chr5_3:55318188-55318207 | None:intergenic | 20.0% |
| !! | GAAAAAGAAATCTTAAATAG+TGG | + | chr5_3:55318411-55318430 | None:intergenic | 20.0% |
| !!! | TTTTATCATTCATTTCATAC+TGG | - | chr5_3:55318695-55318714 | Msa0819190:intron | 20.0% |
| !! | TACTTGCAAGTATAATAAAT+AGG | + | chr5_3:55319659-55319678 | None:intergenic | 20.0% |
| !!! | TTGGATTTATATCTTTCTTT+TGG | - | chr5_3:55319876-55319895 | Msa0819190:intron | 20.0% |
| !! | GAAATTTAATGCTTTAATGT+AGG | - | chr5_3:55319898-55319917 | Msa0819190:intron | 20.0% |
| !! | ATTATATGGATATGTTTAGA+TGG | - | chr5_3:55320242-55320261 | Msa0819190:intron | 20.0% |
| !! | TTACATAGGAGATTAAATTA+AGG | - | chr5_3:55320765-55320784 | Msa0819190:intron | 20.0% |
| !! | TTAATACAAGCAAATACAAA+AGG | + | chr5_3:55320808-55320827 | None:intergenic | 20.0% |
| !! | TGCATAATATACTACATTAT+GGG | + | chr5_3:55320965-55320984 | None:intergenic | 20.0% |
| !! | ATGCATAATATACTACATTA+TGG | + | chr5_3:55320966-55320985 | None:intergenic | 20.0% |
| !! | TTGTTACATAGTACAAAAAA+CGG | - | chr5_3:55321113-55321132 | Msa0819190:intron | 20.0% |
| !! | TTGCATATATAAAGATAGAA+GGG | + | chr5_3:55321727-55321746 | None:intergenic | 20.0% |
| !! | ATTGCATATATAAAGATAGA+AGG | + | chr5_3:55321728-55321747 | None:intergenic | 20.0% |
| !! | TATATAGCATGAAAAGAATA+AGG | - | chr5_3:55321952-55321971 | Msa0819190:intron | 20.0% |
| !!! | TGTCATTATTTTCTTCAATT+TGG | + | chr5_3:55321993-55322012 | None:intergenic | 20.0% |
| !! | TTCAAATGTGATAATATCAA+TGG | - | chr5_3:55322034-55322053 | Msa0819190:intron | 20.0% |
| !!! | TCTATGACTAGTTTATAATT+GGG | + | chr5_3:55322112-55322131 | None:intergenic | 20.0% |
| !! | AGAATACAAAACAAAAATTG+AGG | + | chr5_3:55322583-55322602 | None:intergenic | 20.0% |
| !! | TTGTGTTGTTACATTTACAA+AGG | + | chr5_3:55315935-55315954 | None:intergenic | 25.0% |
| !!! | CTTTCTCTCATTTTTCTTTT+TGG | - | chr5_3:55316242-55316261 | Msa0819190:intron | 25.0% |
| !!! | TTCTCTCATTTTTCTTTTTG+GGG | - | chr5_3:55316244-55316263 | Msa0819190:intron | 25.0% |
| !! | TGGTTTAGTTGAATTTTGAA+TGG | - | chr5_3:55316270-55316289 | Msa0819190:intron | 25.0% |
| ! | AAAACTAAATTCACTAGATG+TGG | + | chr5_3:55316618-55316637 | None:intergenic | 25.0% |
| !!! | TATTTGATGTTTTGATTAGG+CGG | - | chr5_3:55316724-55316743 | Msa0819190:intron | 25.0% |
| ! | TTTAACCAATGAGATTCAAA+GGG | + | chr5_3:55317548-55317567 | None:intergenic | 25.0% |
| ! | ATTTAACCAATGAGATTCAA+AGG | + | chr5_3:55317549-55317568 | None:intergenic | 25.0% |
| ! | GTTCATATTTACATTAACTG+GGG | + | chr5_3:55317795-55317814 | None:intergenic | 25.0% |
| ! | ATGTAAATATGAACTTATGG+AGG | - | chr5_3:55317801-55317820 | Msa0819190:intron | 25.0% |
| !! | TTATCAGTTGATATCAAGTA+CGG | - | chr5_3:55317900-55317919 | Msa0819190:intron | 25.0% |
| ! | CAAATGAACTTCCAAAAAAT+AGG | + | chr5_3:55317930-55317949 | None:intergenic | 25.0% |
| !!! | AGAAGTATTGCTTCAAAATA+AGG | - | chr5_3:55317985-55318004 | Msa0819190:intron | 25.0% |
| !!! | GAAGTATTGCTTCAAAATAA+GGG | - | chr5_3:55317986-55318005 | Msa0819190:intron | 25.0% |
| ! | GAAGAAATAAAAACTGACAA+TGG | + | chr5_3:55318126-55318145 | None:intergenic | 25.0% |
| !!! | GTTTTTATTTCTTCTCTTCA+CGG | - | chr5_3:55318132-55318151 | Msa0819190:intron | 25.0% |
| !!! | TGAATTGTTGATTCAGTTTT+GGG | - | chr5_3:55318271-55318290 | Msa0819190:intron | 25.0% |
| !!! | TAATATTTTGAGACCAAAAG+AGG | - | chr5_3:55318442-55318461 | Msa0819190:intron | 25.0% |
| !!! | AATATTTTGAGACCAAAAGA+GGG | - | chr5_3:55318443-55318462 | Msa0819190:intron | 25.0% |
| !!! | AACAGATGAGAAGTATTTTA+AGG | - | chr5_3:55319029-55319048 | Msa0819190:CDS | 25.0% |
| ! | GTAGAATCAATCTTATATCA+AGG | + | chr5_3:55319260-55319279 | None:intergenic | 25.0% |
| !! | GGTCTATATAAAGTATTAGA+TGG | + | chr5_3:55319282-55319301 | None:intergenic | 25.0% |
| ! | AAGAATTCATTATAGATGCT+TGG | - | chr5_3:55319347-55319366 | Msa0819190:intron | 25.0% |
| ! | GTTAAGATATGCAAATTACT+TGG | - | chr5_3:55319454-55319473 | Msa0819190:intron | 25.0% |
| ! | AAATCAGTCATAACTATTCA+AGG | + | chr5_3:55319748-55319767 | None:intergenic | 25.0% |
| ! | TTCAACAGATATAAGAAACA+TGG | + | chr5_3:55319854-55319873 | None:intergenic | 25.0% |
| ! | TTCTTATATCTGTTGAATCT+TGG | - | chr5_3:55319857-55319876 | Msa0819190:intron | 25.0% |
| !! | GTCAGATCTTTAAAAACATT+TGG | - | chr5_3:55320528-55320547 | Msa0819190:intron | 25.0% |
| !!! | AATTGTTTCTGATTTGTTGA+CGG | - | chr5_3:55320583-55320602 | Msa0819190:intron | 25.0% |
| ! | TGATTTGAATATACAGAAAG+TGG | + | chr5_3:55321479-55321498 | None:intergenic | 25.0% |
| !!! | AAAGATAGTTCTGAGAAAAT+TGG | + | chr5_3:55321524-55321543 | None:intergenic | 25.0% |
| ! | TAGGAGAAGGAAAAATATAT+AGG | - | chr5_3:55321608-55321627 | Msa0819190:CDS | 25.0% |
| ! | TGCATATATAAAGATAGAAG+GGG | + | chr5_3:55321726-55321745 | None:intergenic | 25.0% |
| !! | AAATGATAATGAGTATGTTG+AGG | + | chr5_3:55321907-55321926 | None:intergenic | 25.0% |
| ! | AAAATAATGACATAATACCG+TGG | - | chr5_3:55322001-55322020 | Msa0819190:intron | 25.0% |
| ! | ATTTGAATGAATAAGTACCA+CGG | + | chr5_3:55322021-55322040 | None:intergenic | 25.0% |
| !!! | CTCTATGACTAGTTTATAAT+TGG | + | chr5_3:55322113-55322132 | None:intergenic | 25.0% |
| ! | GTAGATATGGATAAATATTG+GGG | + | chr5_3:55322561-55322580 | None:intergenic | 25.0% |
| ! | GGTAGATATGGATAAATATT+GGG | + | chr5_3:55322562-55322581 | None:intergenic | 25.0% |
| ! | AGGTAGATATGGATAAATAT+TGG | + | chr5_3:55322563-55322582 | None:intergenic | 25.0% |
| ! | AACAAAAATTGAGGTAGATA+TGG | + | chr5_3:55322574-55322593 | None:intergenic | 25.0% |
| ! | TGTTGTTGTTAAAAGGAAAC+AGG | + | chr5_3:55315903-55315922 | None:intergenic | 30.0% |
| !! | CAAGAAGTGTTGTTGTTAAA+AGG | + | chr5_3:55315910-55315929 | None:intergenic | 30.0% |
| ! | TGAAATTTTTGTAACCGAAG+AGG | + | chr5_3:55315963-55315982 | None:intergenic | 30.0% |
| ! | TTTTCCATTACCCTTTTCAA+TGG | - | chr5_3:55316015-55316034 | Msa0819190:intron | 30.0% |
| ATCAAGGATTCCATTGAAAA+GGG | + | chr5_3:55316028-55316047 | None:intergenic | 30.0% | |
| AATCAAGGATTCCATTGAAA+AGG | + | chr5_3:55316029-55316048 | None:intergenic | 30.0% | |
| !! | CTATAAGTATTGACTTGAGT+TGG | + | chr5_3:55316115-55316134 | None:intergenic | 30.0% |
| !! | ATTTGGTGTTATGATTATGG+TGG | - | chr5_3:55316385-55316404 | Msa0819190:intron | 30.0% |
| ATCAACACAATTCACAAGAT+GGG | + | chr5_3:55316439-55316458 | None:intergenic | 30.0% | |
| AATCAACACAATTCACAAGA+TGG | + | chr5_3:55316440-55316459 | None:intergenic | 30.0% | |
| AGTAGGAATGTTTCATAATG+AGG | - | chr5_3:55316823-55316842 | Msa0819190:intron | 30.0% | |
| TCTCCTTATTCTTATACCTT+GGG | + | chr5_3:55316858-55316877 | None:intergenic | 30.0% | |
| TTCTCCTTATTCTTATACCT+TGG | + | chr5_3:55316859-55316878 | None:intergenic | 30.0% | |
| AAGGTCCTACATAATGATTA+GGG | + | chr5_3:55316898-55316917 | None:intergenic | 30.0% | |
| AAAGGTCCTACATAATGATT+AGG | + | chr5_3:55316899-55316918 | None:intergenic | 30.0% | |
| TTGTGCTTATGTGAACTATT+TGG | - | chr5_3:55317059-55317078 | Msa0819190:intron | 30.0% | |
| AAGAAAGAAAACCCTTCTTA+TGG | - | chr5_3:55317093-55317112 | Msa0819190:intron | 30.0% | |
| GGAAATCAAAACAAACTTAC+TGG | + | chr5_3:55317265-55317284 | None:intergenic | 30.0% | |
| ATCTTTCTACTGATATCATG+TGG | - | chr5_3:55317303-55317322 | Msa0819190:intron | 30.0% | |
| TCTTTCTACTGATATCATGT+GGG | - | chr5_3:55317304-55317323 | Msa0819190:intron | 30.0% | |
| GATTCAGTGTTGTCAAATAA+CGG | - | chr5_3:55317360-55317379 | Msa0819190:intron | 30.0% | |
| TTAACCAATGAGATTCAAAG+GGG | + | chr5_3:55317547-55317566 | None:intergenic | 30.0% | |
| ! | GAATCTCATTGGTTAAATTC+AGG | - | chr5_3:55317551-55317570 | Msa0819190:intron | 30.0% |
| TAGCAAGTAGATTTAGCAAA+AGG | + | chr5_3:55317595-55317614 | None:intergenic | 30.0% | |
| !! | TTTTATTTGAGTCATGCTTG+CGG | - | chr5_3:55317625-55317644 | Msa0819190:intron | 30.0% |
| !!! | TTGTTTTGATCATCTAATGC+AGG | - | chr5_3:55317689-55317708 | Msa0819190:intron | 30.0% |
| !!! | AGTACGGTATACCTATTTTT+TGG | - | chr5_3:55317916-55317935 | Msa0819190:intron | 30.0% |
| TGTTTCTCAATAACTAGTAC+AGG | - | chr5_3:55317948-55317967 | Msa0819190:intron | 30.0% | |
| TGTTTGATAAGTTGCTTGAA+GGG | + | chr5_3:55318103-55318122 | None:intergenic | 30.0% | |
| ! | AACAAACGTTGAAGTTGTTT+TGG | - | chr5_3:55318201-55318220 | Msa0819190:intron | 30.0% |
| !!! | CTGAATTGTTGATTCAGTTT+TGG | - | chr5_3:55318270-55318289 | Msa0819190:intron | 30.0% |
| !! | GAACTTTTAGGAAACTTAAG+AGG | - | chr5_3:55318465-55318484 | Msa0819190:intron | 30.0% |
| ! | AAACACTTTTCATTCACCTT+GGG | - | chr5_3:55318528-55318547 | Msa0819190:intron | 30.0% |
| TTTCTCTCTTGATTTCTCTT+AGG | - | chr5_3:55318583-55318602 | Msa0819190:intron | 30.0% | |
| TGAAAAAGGGGTAGAAATTA+TGG | - | chr5_3:55318629-55318648 | Msa0819190:intron | 30.0% | |
| CAATATTTGTTTACCCAGTT+TGG | + | chr5_3:55318763-55318782 | None:intergenic | 30.0% | |
| CAAACTGGGTAAACAAATAT+TGG | - | chr5_3:55318761-55318780 | Msa0819190:intron | 30.0% | |
| TATTCTCTTACCTGTAATCT+TGG | - | chr5_3:55318797-55318816 | Msa0819190:intron | 30.0% | |
| CAAACATAATCCAAGATTAC+AGG | + | chr5_3:55318810-55318829 | None:intergenic | 30.0% | |
| ATGTGTGGAACAAATATCAA+AGG | + | chr5_3:55318899-55318918 | None:intergenic | 30.0% | |
| AGGTTGAATTCAGAACATAA+TGG | - | chr5_3:55318939-55318958 | Msa0819190:intron | 30.0% | |
| ATTGCTCAATCTTATGAGAA+AGG | - | chr5_3:55318982-55319001 | Msa0819190:CDS | 30.0% | |
| CACTGCTAAACGTTAATATT+TGG | - | chr5_3:55319095-55319114 | Msa0819190:CDS | 30.0% | |
| !! | TGATTTGTGTTTTCTTGTTC+AGG | - | chr5_3:55319166-55319185 | Msa0819190:intron | 30.0% |
| ! | GATTTGTGTTTTCTTGTTCA+GGG | - | chr5_3:55319167-55319186 | Msa0819190:intron | 30.0% |
| TTGGAGTTAATAAGAAATGC+TGG | - | chr5_3:55319203-55319222 | Msa0819190:intron | 30.0% | |
| AATAAGAAATGCTGGAGTAA+AGG | - | chr5_3:55319211-55319230 | Msa0819190:intron | 30.0% | |
| TGAATTCTTTGCACAACAAA+GGG | + | chr5_3:55319336-55319355 | None:intergenic | 30.0% | |
| ATGAATTCTTTGCACAACAA+AGG | + | chr5_3:55319337-55319356 | None:intergenic | 30.0% | |
| ATGTATTTGATGTCAAGATC+AGG | + | chr5_3:55319433-55319452 | None:intergenic | 30.0% | |
| TGATCTTGACATCAAATACA+TGG | - | chr5_3:55319432-55319451 | Msa0819190:intron | 30.0% | |
| AAAAAATGTTGTATTCCAGC+CGG | + | chr5_3:55319545-55319564 | None:intergenic | 30.0% | |
| !! | TTACGGTTCTGAAGTAAATT+TGG | + | chr5_3:55319699-55319718 | None:intergenic | 30.0% |
| TATGGATATGTTTAGATGGT+TGG | - | chr5_3:55320246-55320265 | Msa0819190:intron | 30.0% | |
| ATGGATATGTTTAGATGGTT+GGG | - | chr5_3:55320247-55320266 | Msa0819190:intron | 30.0% | |
| AAAATTACGGACATCGATAT+TGG | + | chr5_3:55320458-55320477 | None:intergenic | 30.0% | |
| !! | AATTTTTCACAGGTTTTGGT+GGG | - | chr5_3:55320659-55320678 | Msa0819190:intron | 30.0% |
| !! | TTGAGTTGACTGATTTACAT+AGG | - | chr5_3:55320751-55320770 | Msa0819190:intron | 30.0% |
| AGTCTGCATTTATAACTTAG+AGG | - | chr5_3:55321041-55321060 | Msa0819190:intron | 30.0% | |
| TATAACTTAGAGGTGAAAGT+TGG | - | chr5_3:55321051-55321070 | Msa0819190:intron | 30.0% | |
| ATCATCGAATTCAATTTGAG+TGG | - | chr5_3:55321156-55321175 | Msa0819190:intron | 30.0% | |
| ACATATTCTTCTATCTCAAG+TGG | - | chr5_3:55321237-55321256 | Msa0819190:CDS | 30.0% | |
| CATATTCTTCTATCTCAAGT+GGG | - | chr5_3:55321238-55321257 | Msa0819190:CDS | 30.0% | |
| TAAAGACAGTTTCCAAAACT+GGG | + | chr5_3:55321423-55321442 | None:intergenic | 30.0% | |
| !! | ATAGTTCTGAGAAAATTGGA+TGG | + | chr5_3:55321520-55321539 | None:intergenic | 30.0% |
| TCAGAAGGAAGTGAAAATAA+AGG | + | chr5_3:55322309-55322328 | None:intergenic | 30.0% | |
| ! | GAACATGATGATGTAGATAT+GGG | + | chr5_3:55322510-55322529 | None:intergenic | 30.0% |
| ! | AGAACATGATGATGTAGATA+TGG | + | chr5_3:55322511-55322530 | None:intergenic | 30.0% |
| ATATGGATAAATATTGGGGA+AGG | + | chr5_3:55322557-55322576 | None:intergenic | 30.0% | |
| !! | TGTATGTGTTAATTTGCAGA+TGG | + | chr5_3:55322615-55322634 | None:intergenic | 30.0% |
| ! | TCTGGTTCAAACATTGAACT+GGG | + | chr5_3:55315814-55315833 | None:intergenic | 35.0% |
| !! | TTCTGGTTCAAACATTGAAC+TGG | + | chr5_3:55315815-55315834 | None:intergenic | 35.0% |
| ! | ATTGTCGTTCATGCATTTTC+TGG | + | chr5_3:55315832-55315851 | None:intergenic | 35.0% |
| TGAACGACAATCTGTGAAAT+CGG | - | chr5_3:55315841-55315860 | Msa0819190:intron | 35.0% | |
| ACAACACAACATAACCTCTT+CGG | - | chr5_3:55315946-55315965 | Msa0819190:intron | 35.0% | |
| GATTCCATTGAAAAGGGTAA+TGG | + | chr5_3:55316022-55316041 | None:intergenic | 35.0% | |
| GAATCCTTGATTTCTCTCAA+GGG | - | chr5_3:55316037-55316056 | Msa0819190:intron | 35.0% | |
| !! | TAAGTATTGACTTGAGTTGG+AGG | + | chr5_3:55316112-55316131 | None:intergenic | 35.0% |
| !!! | CATTTTTCTTTTTGGGGTGT+TGG | - | chr5_3:55316250-55316269 | Msa0819190:intron | 35.0% |
| GAATGGTATATGCGTTCAAT+TGG | - | chr5_3:55316287-55316306 | Msa0819190:intron | 35.0% | |
| ! | ATTATGGTGGAGCATAATGA+AGG | - | chr5_3:55316398-55316417 | Msa0819190:intron | 35.0% |
| TCAACACAATTCACAAGATG+GGG | + | chr5_3:55316438-55316457 | None:intergenic | 35.0% | |
| ATTAAGGTGAAGCATGATGA+TGG | - | chr5_3:55316578-55316597 | Msa0819190:intron | 35.0% | |
| AAGCTCTCAAAGTTAAGGAA+TGG | - | chr5_3:55316798-55316817 | Msa0819190:intron | 35.0% | |
| AGCTCTCAAAGTTAAGGAAT+GGG | - | chr5_3:55316799-55316818 | Msa0819190:intron | 35.0% | |
| AAAGTTAAGGAATGGGAAGT+AGG | - | chr5_3:55316806-55316825 | Msa0819190:intron | 35.0% | |
| CTACCCAAGGTATAAGAATA+AGG | - | chr5_3:55316852-55316871 | Msa0819190:intron | 35.0% | |
| AGGTCCTACATAATGATTAG+GGG | + | chr5_3:55316897-55316916 | None:intergenic | 35.0% | |
| ! | ATGTAGGACCTTTTCAATTC+CGG | - | chr5_3:55316906-55316925 | Msa0819190:intron | 35.0% |
| AGAAAACCCTTCTTATGGTT+AGG | - | chr5_3:55317098-55317117 | Msa0819190:intron | 35.0% | |
| ATTGATTGCTGAAGTCAAGA+AGG | - | chr5_3:55317201-55317220 | Msa0819190:intron | 35.0% | |
| ! | CATGTGGGAAATGTTTGTTT+TGG | - | chr5_3:55317319-55317338 | Msa0819190:intron | 35.0% |
| !! | AGTAGAGTGTTGTCAAATAG+TGG | - | chr5_3:55317440-55317459 | Msa0819190:intron | 35.0% |
| CAATAACTAGTACAGGTTCA+TGG | - | chr5_3:55317955-55317974 | Msa0819190:intron | 35.0% | |
| TGATGCGATGCAAAAATACA+AGG | + | chr5_3:55318071-55318090 | None:intergenic | 35.0% | |
| GTGTTTGATAAGTTGCTTGA+AGG | + | chr5_3:55318104-55318123 | None:intergenic | 35.0% | |
| !!! | AAGTTGTTTTGGTGCAAAAC+TGG | - | chr5_3:55318212-55318231 | Msa0819190:intron | 35.0% |
| ! | TTCCTAAAAGTTCCCTCTTT+TGG | + | chr5_3:55318458-55318477 | None:intergenic | 35.0% |
| ! | GAAACACTTTTCATTCACCT+TGG | - | chr5_3:55318527-55318546 | Msa0819190:intron | 35.0% |
| TTTCTCTTAGGATCTCATTG+TGG | - | chr5_3:55318595-55318614 | Msa0819190:intron | 35.0% | |
| TTCTCTTAGGATCTCATTGT+GGG | - | chr5_3:55318596-55318615 | Msa0819190:intron | 35.0% | |
| GATTACAGGTAAGAGAATAG+AGG | + | chr5_3:55318796-55318815 | None:intergenic | 35.0% | |
| TGTTCCACACATCAAATTTG+TGG | - | chr5_3:55318907-55318926 | Msa0819190:intron | 35.0% | |
| !! | CATAATGGATTCTCTCTTAC+AGG | - | chr5_3:55318954-55318973 | Msa0819190:intron | 35.0% |
| !! | TCAGGGAAGCTTTGAAAATT+TGG | - | chr5_3:55319184-55319203 | Msa0819190:intron | 35.0% |
| CTTTATATAGACCATGCTGA+TGG | - | chr5_3:55319289-55319308 | Msa0819190:intron | 35.0% | |
| !!! | AGGGCACTGCATATTTTTTT+TGG | + | chr5_3:55319317-55319336 | None:intergenic | 35.0% |
| GATATGCAAATTACTTGGAC+TGG | - | chr5_3:55319459-55319478 | Msa0819190:intron | 35.0% | |
| TGTTTCCTGAATGTGAATGA+CGG | - | chr5_3:55319519-55319538 | Msa0819190:intron | 35.0% | |
| GGAATCAACAATCGTAATCT+TGG | - | chr5_3:55319977-55319996 | Msa0819190:intron | 35.0% | |
| !!! | TGTGGCTTCTATTTTTTGTG+TGG | - | chr5_3:55320064-55320083 | Msa0819190:intron | 35.0% |
| TGGATATGTTTAGATGGTTG+GGG | - | chr5_3:55320248-55320267 | Msa0819190:intron | 35.0% | |
| ATTGCTTATGTACAAGAAGC+AGG | - | chr5_3:55320297-55320316 | Msa0819190:intron | 35.0% | |
| ! | AACTCTCGTCAATTTTTCAC+AGG | - | chr5_3:55320649-55320668 | Msa0819190:intron | 35.0% |
| ! | CGTCAATTTTTCACAGGTTT+TGG | - | chr5_3:55320655-55320674 | Msa0819190:intron | 35.0% |
| !! | CAATTTTTCACAGGTTTTGG+TGG | - | chr5_3:55320658-55320677 | Msa0819190:intron | 35.0% |
| ATTGTGAAACAAAGTGATCC+TGG | - | chr5_3:55320689-55320708 | Msa0819190:intron | 35.0% | |
| AAACAAAGTGATCCTGGAAA+GGG | - | chr5_3:55320695-55320714 | Msa0819190:intron | 35.0% | |
| AAGGGAATTAGCAATCTCTT+TGG | - | chr5_3:55320713-55320732 | Msa0819190:intron | 35.0% | |
| ! | GTCAACGCAAAAAGATGTTT+TGG | + | chr5_3:55320863-55320882 | None:intergenic | 35.0% |
| !! | TACTGTGTTTTAGACTCAGA+TGG | - | chr5_3:55321367-55321386 | Msa0819190:intron | 35.0% |
| CTAAAGACAGTTTCCAAAAC+TGG | + | chr5_3:55321424-55321443 | None:intergenic | 35.0% | |
| !! | AACTGTCTTTAGAACTGTGT+CGG | - | chr5_3:55321432-55321451 | Msa0819190:intron | 35.0% |
| ! | ATACAGAAAGTGGTAGTGAA+AGG | + | chr5_3:55321469-55321488 | None:intergenic | 35.0% |
| ACATCCTTCACATGACTTAT+GGG | - | chr5_3:55321555-55321574 | Msa0819190:CDS | 35.0% | |
| CTTATGGGGATGATGATATA+AGG | - | chr5_3:55321570-55321589 | Msa0819190:CDS | 35.0% | |
| AAGGAAGAGATAGAAGTCAT+AGG | - | chr5_3:55321589-55321608 | Msa0819190:CDS | 35.0% | |
| ! | TGTGCTCTTATGTCTGTTTT+TGG | - | chr5_3:55321839-55321858 | Msa0819190:intron | 35.0% |
| TGTGATCATACAAGAGAATG+CGG | + | chr5_3:55321881-55321900 | None:intergenic | 35.0% | |
| ACAAAACACATGCATCTATC+TGG | - | chr5_3:55322174-55322193 | Msa0819190:intron | 35.0% | |
| !!! | ATGCATCTATCTGGTTTTCA+TGG | - | chr5_3:55322183-55322202 | Msa0819190:intron | 35.0% |
| AGTGAAAATAAAGGACCTAG+AGG | + | chr5_3:55322300-55322319 | None:intergenic | 35.0% | |
| TCAGGAGGAAGTGAAAATAA+AGG | + | chr5_3:55322417-55322436 | None:intergenic | 35.0% | |
| GTTCAAACATTGAACTGGGT+AGG | + | chr5_3:55315810-55315829 | None:intergenic | 40.0% | |
| GGAATCCTTGATTTCTCTCA+AGG | - | chr5_3:55316036-55316055 | Msa0819190:intron | 40.0% | |
| GTTACCCTTGAGAGAAATCA+AGG | + | chr5_3:55316044-55316063 | None:intergenic | 40.0% | |
| ATTGTAGCCGAACCTTCATT+AGG | + | chr5_3:55316752-55316771 | None:intergenic | 40.0% | |
| GGTTGAAGCTCTCAAAGTTA+AGG | - | chr5_3:55316793-55316812 | Msa0819190:intron | 40.0% | |
| GGTCCTACATAATGATTAGG+GGG | + | chr5_3:55316896-55316915 | None:intergenic | 40.0% | |
| TTCTGCAACCGGAATTGAAA+AGG | + | chr5_3:55316917-55316936 | None:intergenic | 40.0% | |
| AAATACACCGCGTAACATCT+TGG | - | chr5_3:55316943-55316962 | Msa0819190:intron | 40.0% | |
| ATCTCTTCCAAGATGTTACG+CGG | + | chr5_3:55316953-55316972 | None:intergenic | 40.0% | |
| ACATCTTGGAAGAGATTGTG+TGG | - | chr5_3:55316957-55316976 | Msa0819190:intron | 40.0% | |
| AACCCTTCTTATGGTTAGGA+AGG | - | chr5_3:55317102-55317121 | Msa0819190:intron | 40.0% | |
| !! | AACAGGAGGTGCATTTTCAA+GGG | + | chr5_3:55317128-55317147 | None:intergenic | 40.0% |
| TTGAAAATGCACCTCCTGTT+CGG | - | chr5_3:55317128-55317147 | Msa0819190:intron | 40.0% | |
| ! | CTCCTGTTCGGGATTTTATT+GGG | - | chr5_3:55317140-55317159 | Msa0819190:intron | 40.0% |
| ! | TCCTGTTCGGGATTTTATTG+GGG | - | chr5_3:55317141-55317160 | Msa0819190:intron | 40.0% |
| !! | GGATTTTATTGGGGCTCTAA+GGG | - | chr5_3:55317150-55317169 | Msa0819190:intron | 40.0% |
| TAATGAACGAACTGGATTGC+CGG | - | chr5_3:55317177-55317196 | Msa0819190:intron | 40.0% | |
| TTGACTTCAGCAATCAATCC+CGG | + | chr5_3:55317199-55317218 | None:intergenic | 40.0% | |
| GATTTCCACTGTGATCTTTG+AGG | - | chr5_3:55317278-55317297 | Msa0819190:intron | 40.0% | |
| GATAACCTCAAAGATCACAG+TGG | + | chr5_3:55317286-55317305 | None:intergenic | 40.0% | |
| !!! | ATGTTTGTTTTGGCTCCAAC+TGG | - | chr5_3:55317329-55317348 | Msa0819190:intron | 40.0% |
| CTGAATCAGATATAGCCAGT+TGG | + | chr5_3:55317347-55317366 | None:intergenic | 40.0% | |
| ! | AATAACGGCTCTAGCACTAT+AGG | - | chr5_3:55317375-55317394 | Msa0819190:intron | 40.0% |
| ! | ATAACGGCTCTAGCACTATA+GGG | - | chr5_3:55317376-55317395 | Msa0819190:intron | 40.0% |
| TTGCTGATCACAGAAACTAG+CGG | + | chr5_3:55317511-55317530 | None:intergenic | 40.0% | |
| TAGACCCCTTTGAATCTCAT+TGG | - | chr5_3:55317540-55317559 | Msa0819190:intron | 40.0% | |
| TTGTGCTTGTCTAAGTCATG+TGG | + | chr5_3:55317854-55317873 | None:intergenic | 40.0% | |
| GATAAGTTGCTTGAAGGGTT+TGG | + | chr5_3:55318098-55318117 | None:intergenic | 40.0% | |
| ACACACAACAAGCAAAACAG+TGG | + | chr5_3:55318164-55318183 | None:intergenic | 40.0% | |
| ! | GACCAAAAGAGGGAACTTTT+AGG | - | chr5_3:55318453-55318472 | Msa0819190:intron | 40.0% |
| TTAGGAAACTTAAGAGGCCA+AGG | - | chr5_3:55318471-55318490 | Msa0819190:CDS | 40.0% | |
| TAGGAAACTTAAGAGGCCAA+GGG | - | chr5_3:55318472-55318491 | Msa0819190:CDS | 40.0% | |
| !! | TGCTTTTGGGTGAGATTCTT+GGG | - | chr5_3:55318500-55318519 | Msa0819190:CDS | 40.0% |
| ! | TGGGTTGAACGACTTGAAAA+AGG | - | chr5_3:55318615-55318634 | Msa0819190:intron | 40.0% |
| GGGTTGAACGACTTGAAAAA+GGG | - | chr5_3:55318616-55318635 | Msa0819190:intron | 40.0% | |
| GGTTGAACGACTTGAAAAAG+GGG | - | chr5_3:55318617-55318636 | Msa0819190:intron | 40.0% | |
| ACAGTCTCAAGCAACAACAA+CGG | + | chr5_3:55318862-55318881 | None:intergenic | 40.0% | |
| ! | TGTTGTTGCTTGAGACTGTT+TGG | - | chr5_3:55318863-55318882 | Msa0819190:intron | 40.0% |
| GCTTGAGACTGTTTGGTTAT+TGG | - | chr5_3:55318870-55318889 | Msa0819190:intron | 40.0% | |
| CAGACCACAAATTTGATGTG+TGG | + | chr5_3:55318914-55318933 | None:intergenic | 40.0% | |
| CACACATCAAATTTGTGGTC+TGG | - | chr5_3:55318912-55318931 | Msa0819190:intron | 40.0% | |
| ! | CAAATTTGTGGTCTGGTTTG+AGG | - | chr5_3:55318919-55318938 | Msa0819190:intron | 40.0% |
| GCTCAATCTTATGAGAAAGG+TGG | - | chr5_3:55318985-55319004 | Msa0819190:CDS | 40.0% | |
| !!! | TTTTTTTGGTGCCATCAGCA+TGG | + | chr5_3:55319303-55319322 | None:intergenic | 40.0% |
| GTAAAACAGCGGCAATTAGA+AGG | + | chr5_3:55319411-55319430 | None:intergenic | 40.0% | |
| GTCAAGATCAGGTAAAACAG+CGG | + | chr5_3:55319422-55319441 | None:intergenic | 40.0% | |
| GATCGTGTTCTTGGAATAGA+GGG | - | chr5_3:55319941-55319960 | Msa0819190:intron | 40.0% | |
| TGTACATAAGCAATGTCTGC+AGG | + | chr5_3:55320291-55320310 | None:intergenic | 40.0% | |
| TCATAAACACAACCACGATG+AGG | - | chr5_3:55320370-55320389 | Msa0819190:intron | 40.0% | |
| CATAAACTAAAGCCTCATCG+TGG | + | chr5_3:55320385-55320404 | None:intergenic | 40.0% | |
| GAAACAAAGTGATCCTGGAA+AGG | - | chr5_3:55320694-55320713 | Msa0819190:intron | 40.0% | |
| AGATTGCTAATTCCCTTTCC+AGG | + | chr5_3:55320710-55320729 | None:intergenic | 40.0% | |
| TTGAGTGGTTGAAATGTAGC+AGG | - | chr5_3:55321171-55321190 | Msa0819190:intron | 40.0% | |
| TGAGTGGTTGAAATGTAGCA+GGG | - | chr5_3:55321172-55321191 | Msa0819190:intron | 40.0% | |
| TTTAGACTCAGATGGAGCTT+CGG | - | chr5_3:55321375-55321394 | Msa0819190:intron | 40.0% | |
| !! | ACTGTCTTTAGAACTGTGTC+GGG | - | chr5_3:55321433-55321452 | Msa0819190:intron | 40.0% |
| TCTGAGAAAATTGGATGGTG+TGG | + | chr5_3:55321515-55321534 | None:intergenic | 40.0% | |
| CACATCCTTCACATGACTTA+TGG | - | chr5_3:55321554-55321573 | Msa0819190:CDS | 40.0% | |
| CATCCTTCACATGACTTATG+GGG | - | chr5_3:55321556-55321575 | Msa0819190:CDS | 40.0% | |
| GAGATAGAAGTCATAGGAGA+AGG | - | chr5_3:55321595-55321614 | Msa0819190:CDS | 40.0% | |
| GAAAATAAAGGACCTAGAGG+AGG | + | chr5_3:55322297-55322316 | None:intergenic | 40.0% | |
| GAAGGTCAAGGAGAAACAAA+AGG | + | chr5_3:55322372-55322391 | None:intergenic | 40.0% | |
| GGAAGTGAAAATAAAGGACC+CGG | + | chr5_3:55322303-55322322 | None:intergenic | 40.0% | |
| ACACCTAGAAGAAGAGGAAA+TGG | + | chr5_3:55322468-55322487 | None:intergenic | 40.0% | |
| ATGATGTAGATATGGGAGGT+TGG | + | chr5_3:55322503-55322522 | None:intergenic | 40.0% | |
| ! | CATGATGATGTAGATATGGG+AGG | + | chr5_3:55322507-55322526 | None:intergenic | 40.0% |
| GATAAATATTGGGGAAGGAG+TGG | + | chr5_3:55322552-55322571 | None:intergenic | 40.0% | |
| TGGGATTGGAAGAGAACGAA+GGG | + | chr5_3:55316078-55316097 | None:intergenic | 45.0% | |
| !! | AGGAATAGTGGTTCTGGGAT+TGG | + | chr5_3:55316092-55316111 | None:intergenic | 45.0% |
| GTTGGAGGAATAGTGGTTCT+GGG | + | chr5_3:55316097-55316116 | None:intergenic | 45.0% | |
| AGTTGGAGGAATAGTGGTTC+TGG | + | chr5_3:55316098-55316117 | None:intergenic | 45.0% | |
| !! | GACTTGAGTTGGAGGAATAG+TGG | + | chr5_3:55316104-55316123 | None:intergenic | 45.0% |
| ! | TACGTTTTCTGTTCGAGCAC+AGG | - | chr5_3:55316150-55316169 | Msa0819190:intron | 45.0% |
| AACCACAGATTCACCAGATG+TGG | + | chr5_3:55316777-55316796 | None:intergenic | 45.0% | |
| ATAAGGAGAAGACCACCAAC+TGG | - | chr5_3:55316869-55316888 | Msa0819190:intron | 45.0% | |
| TAATGATTAGGGGGTCCAGT+TGG | + | chr5_3:55316887-55316906 | None:intergenic | 45.0% | |
| GGACCCCCTAATCATTATGT+AGG | - | chr5_3:55316890-55316909 | Msa0819190:intron | 45.0% | |
| TATTTCCCTCGTTCTGCAAC+CGG | + | chr5_3:55316928-55316947 | None:intergenic | 45.0% | |
| GGAAGAGATTGTGTGGAACA+AGG | - | chr5_3:55316964-55316983 | Msa0819190:intron | 45.0% | |
| GGCCTTCCTAACCATAAGAA+GGG | + | chr5_3:55317107-55317126 | None:intergenic | 45.0% | |
| !! | GAACAGGAGGTGCATTTTCA+AGG | + | chr5_3:55317129-55317148 | None:intergenic | 45.0% |
| TGAAAATGCACCTCCTGTTC+GGG | - | chr5_3:55317129-55317148 | Msa0819190:intron | 45.0% | |
| CCAATAAAATCCCGAACAGG+AGG | + | chr5_3:55317142-55317161 | None:intergenic | 45.0% | |
| ! | CCTCCTGTTCGGGATTTTAT+TGG | - | chr5_3:55317139-55317158 | Msa0819190:intron | 45.0% |
| ! | GGGATTTTATTGGGGCTCTA+AGG | - | chr5_3:55317149-55317168 | Msa0819190:intron | 45.0% |
| AATGAACGAACTGGATTGCC+GGG | - | chr5_3:55317178-55317197 | Msa0819190:intron | 45.0% | |
| AAGAAGGCTTCACCAAGTAG+AGG | - | chr5_3:55317217-55317236 | Msa0819190:intron | 45.0% | |
| TCTCTCAAGATGCCTCTACT+TGG | + | chr5_3:55317232-55317251 | None:intergenic | 45.0% | |
| GCTACAACACTGTAGCATAG+CGG | - | chr5_3:55317473-55317492 | Msa0819190:intron | 45.0% | |
| CAAAACTGGTCATTTCCGCA+AGG | - | chr5_3:55318226-55318245 | Msa0819190:intron | 45.0% | |
| ! | GCCAAGGGTTAAGTGCTTTT+GGG | - | chr5_3:55318487-55318506 | Msa0819190:CDS | 45.0% |
| !! | ACCCAAAAGCACTTAACCCT+TGG | + | chr5_3:55318491-55318510 | None:intergenic | 45.0% |
| !! | GTGCTTTTGGGTGAGATTCT+TGG | - | chr5_3:55318499-55318518 | Msa0819190:CDS | 45.0% |
| TTTGGGTGAGATTCTTGGGT+TGG | - | chr5_3:55318504-55318523 | Msa0819190:CDS | 45.0% | |
| TTGGGTGAGATTCTTGGGTT+GGG | - | chr5_3:55318505-55318524 | Msa0819190:CDS | 45.0% | |
| ! | CACTTTTCATTCACCTTGGG+TGG | - | chr5_3:55318531-55318550 | Msa0819190:intron | 45.0% |
| TAATGAGATCTCACCACCCA+AGG | + | chr5_3:55318547-55318566 | None:intergenic | 45.0% | |
| GGTGGTGAGATCTCATTAGA+GGG | - | chr5_3:55318549-55318568 | Msa0819190:intron | 45.0% | |
| CCAATATGACCTACGTCTAG+GGG | + | chr5_3:55318739-55318758 | None:intergenic | 45.0% | |
| CCCAATATGACCTACGTCTA+GGG | + | chr5_3:55318740-55318759 | None:intergenic | 45.0% | |
| CCCTAGACGTAGGTCATATT+GGG | - | chr5_3:55318737-55318756 | Msa0819190:intron | 45.0% | |
| TAGGTCATATTGGGCCAAAC+TGG | - | chr5_3:55318746-55318765 | Msa0819190:intron | 45.0% | |
| AGGTCATATTGGGCCAAACT+GGG | - | chr5_3:55318747-55318766 | Msa0819190:intron | 45.0% | |
| CTCTACTATGCTCGATCCAA+AGG | - | chr5_3:55319373-55319392 | Msa0819190:intron | 45.0% | |
| TAATGTAGGTGCACGATGAG+AGG | - | chr5_3:55319912-55319931 | Msa0819190:intron | 45.0% | |
| AATGTAGGTGCACGATGAGA+GGG | - | chr5_3:55319913-55319932 | Msa0819190:intron | 45.0% | |
| AGGGAATTCGATCGTGTTCT+TGG | - | chr5_3:55319932-55319951 | Msa0819190:intron | 45.0% | |
| CGATCGTGTTCTTGGAATAG+AGG | - | chr5_3:55319940-55319959 | Msa0819190:intron | 45.0% | |
| ACCACGAAGAAGCTTCTTGA+AGG | - | chr5_3:55320116-55320135 | Msa0819190:intron | 45.0% | |
| TCCTTCAAGAAGCTTCTTCG+TGG | + | chr5_3:55320120-55320139 | None:intergenic | 45.0% | |
| GTTTAGATGGTTGGGGAATC+TGG | - | chr5_3:55320255-55320274 | Msa0819190:intron | 45.0% | |
| TTGAAATGTAGCAGGGTCAG+AGG | - | chr5_3:55321179-55321198 | Msa0819190:intron | 45.0% | |
| CATCCCCATAAGTCATGTGA+AGG | + | chr5_3:55321562-55321581 | None:intergenic | 45.0% | |
| GAAGGTGGAGGGATCAAAAA+TGG | + | chr5_3:55322225-55322244 | None:intergenic | 45.0% | |
| GAAGGTCGAGGAGAAACAAA+AGG | + | chr5_3:55322258-55322277 | None:intergenic | 45.0% | |
| AATAAAGGACCTAGAGGAGG+AGG | + | chr5_3:55322294-55322313 | None:intergenic | 45.0% | |
| GGAAACAAAGGAGGTTCAGA+AGG | + | chr5_3:55322324-55322343 | None:intergenic | 45.0% | |
| CAAGGAGAAACAAAAGGACC+TGG | + | chr5_3:55322366-55322385 | None:intergenic | 45.0% | |
| AGTGAAAATAAAGGACCCGG+AGG | + | chr5_3:55322408-55322427 | None:intergenic | 45.0% | |
| TCAGAAGGAGGAAACAAAGG+AGG | + | chr5_3:55322441-55322460 | None:intergenic | 45.0% | |
| GGATCAGAAGGAGGAAACAA+AGG | + | chr5_3:55322444-55322463 | None:intergenic | 45.0% | |
| AGAGGAAATGGAGGATCAGA+AGG | + | chr5_3:55322456-55322475 | None:intergenic | 45.0% | |
| CCTAGAAGAAGAGGAAATGG+AGG | + | chr5_3:55322465-55322484 | None:intergenic | 45.0% | |
| CCTCCATTTCCTCTTCTTCT+AGG | - | chr5_3:55322462-55322481 | Msa0819190:five_prime_UTR | 45.0% | |
| ! | GTAGATATGGGAGGTTGGTT+AGG | + | chr5_3:55322498-55322517 | None:intergenic | 45.0% |
| AATATTGGGGAAGGAGTGGA+GGG | + | chr5_3:55322548-55322567 | None:intergenic | 45.0% | |
| AAATATTGGGGAAGGAGTGG+AGG | + | chr5_3:55322549-55322568 | None:intergenic | 45.0% | |
| !! | ATAAATCTAAATTAAAATTA+CGG | + | chr5_3:55320471-55320490 | None:intergenic | 5.0% |
| CTGGGATTGGAAGAGAACGA+AGG | + | chr5_3:55316079-55316098 | None:intergenic | 50.0% | |
| GATTAGGCGGAGCCTAATGA+AGG | - | chr5_3:55316737-55316756 | Msa0819190:intron | 50.0% | |
| TCGGCTACAATAGCCACATC+TGG | - | chr5_3:55316761-55316780 | Msa0819190:intron | 50.0% | |
| AGCCACATCTGGTGAATCTG+TGG | - | chr5_3:55316772-55316791 | Msa0819190:intron | 50.0% | |
| AATGAGGTTGCTGCTACCCA+AGG | - | chr5_3:55316839-55316858 | Msa0819190:intron | 50.0% | |
| TCAATTCCGGTTGCAGAACG+AGG | - | chr5_3:55316919-55316938 | Msa0819190:intron | 50.0% | |
| CAATTCCGGTTGCAGAACGA+GGG | - | chr5_3:55316920-55316939 | Msa0819190:intron | 50.0% | |
| GGGCCTTCCTAACCATAAGA+AGG | + | chr5_3:55317108-55317127 | None:intergenic | 50.0% | |
| GCCCCAATAAAATCCCGAAC+AGG | + | chr5_3:55317145-55317164 | None:intergenic | 50.0% | |
| AGGGCAGCTAATGAACGAAC+TGG | - | chr5_3:55317169-55317188 | Msa0819190:intron | 50.0% | |
| GCTCTAGCACTATAGGGTAG+TGG | - | chr5_3:55317382-55317401 | Msa0819190:intron | 50.0% | |
| ! | TTTTCCCTGCCAAAACCGCA+AGG | - | chr5_3:55318299-55318318 | Msa0819190:CDS | 50.0% |
| ! | GGCCAAGGGTTAAGTGCTTT+TGG | - | chr5_3:55318486-55318505 | Msa0819190:CDS | 50.0% |
| GGGTGGTGAGATCTCATTAG+AGG | - | chr5_3:55318548-55318567 | Msa0819190:intron | 50.0% | |
| GGTGAGATCTCATTAGAGGG+AGG | - | chr5_3:55318552-55318571 | Msa0819190:intron | 50.0% | |
| CCCCTAGACGTAGGTCATAT+TGG | - | chr5_3:55318736-55318755 | Msa0819190:intron | 50.0% | |
| GCCCAATATGACCTACGTCT+AGG | + | chr5_3:55318741-55318760 | None:intergenic | 50.0% | |
| AAGGACTGCATCTGCACCTT+TGG | + | chr5_3:55319392-55319411 | None:intergenic | 50.0% | |
| TCCTGAATGTGAATGACGGC+CGG | - | chr5_3:55319523-55319542 | Msa0819190:intron | 50.0% | |
| TGTGATACCTACACCGTAGC+TGG | - | chr5_3:55319774-55319793 | Msa0819190:intron | 50.0% | |
| !! | ATAGAGGGCGTTGAGCTCAT+TGG | - | chr5_3:55319956-55319975 | Msa0819190:intron | 50.0% |
| AGGACCTGAGTCATCAACTG+TGG | - | chr5_3:55320046-55320065 | Msa0819190:intron | 50.0% | |
| !! | GAAGCCACAGTTGATGACTC+AGG | + | chr5_3:55320053-55320072 | None:intergenic | 50.0% |
| AAGCTTCTTGAAGGAGAGCG+AGG | - | chr5_3:55320125-55320144 | Msa0819190:intron | 50.0% | |
| AGCTTCGGCTTCCTAGAATG+TGG | - | chr5_3:55321390-55321409 | Msa0819190:intron | 50.0% | |
| TCGGCTTCCTAGAATGTGGT+TGG | - | chr5_3:55321394-55321413 | Msa0819190:intron | 50.0% | |
| TGGGAAGCCAACCACATTCT+AGG | + | chr5_3:55321404-55321423 | None:intergenic | 50.0% | |
| !!! | TGTGGTTGGCTTCCCAGTTT+TGG | - | chr5_3:55321408-55321427 | Msa0819190:intron | 50.0% |
| ACAAAAGGACCTGGAGGAGA+AGG | + | chr5_3:55322243-55322262 | None:intergenic | 50.0% | |
| GGAGAAACAAAAGGACCTGG+AGG | + | chr5_3:55322249-55322268 | None:intergenic | 50.0% | |
| CGAGGAGAAACAAAAGGACC+TGG | + | chr5_3:55322252-55322271 | None:intergenic | 50.0% | |
| ACAAAAGGACCTGGAGGAGA+AGG | + | chr5_3:55322243-55322262 | None:intergenic | 50.0% | |
| GGAGAAACAAAAGGACCTGG+AGG | + | chr5_3:55322249-55322268 | None:intergenic | 50.0% | |
| GAAAATAAAGGACCCGGAGG+AGG | + | chr5_3:55322405-55322424 | None:intergenic | 50.0% | |
| GGAAACAAAGGAGGTTCAGG+AGG | + | chr5_3:55322432-55322451 | None:intergenic | 50.0% | |
| GGAGGAAACAAAGGAGGTTC+AGG | + | chr5_3:55322327-55322346 | None:intergenic | 50.0% | |
| GGAAATGGAGGATCAGAAGG+AGG | + | chr5_3:55322453-55322472 | None:intergenic | 50.0% | |
| AGAGGGACACCTAGAAGAAG+AGG | + | chr5_3:55322474-55322493 | None:intergenic | 50.0% | |
| ! | TGGGAGGTTGGTTAGGAAGA+GGG | + | chr5_3:55322491-55322510 | None:intergenic | 50.0% |
| ! | ATGGGAGGTTGGTTAGGAAG+AGG | + | chr5_3:55322492-55322511 | None:intergenic | 50.0% |
| ATATTGGGGAAGGAGTGGAG+GGG | + | chr5_3:55322547-55322566 | None:intergenic | 50.0% | |
| GGCGGAGCCTAATGAAGGTT+CGG | - | chr5_3:55316742-55316761 | Msa0819190:intron | 55.0% | |
| TGATTAGGGGGTCCAGTTGG+TGG | + | chr5_3:55316884-55316903 | None:intergenic | 55.0% | |
| CAAGGACAAAGAAGTCGCGC+AGG | - | chr5_3:55316982-55317001 | Msa0819190:intron | 55.0% | |
| !! | TTTCCGCAAGGCGTTGACAG+AGG | - | chr5_3:55318238-55318257 | Msa0819190:intron | 55.0% |
| GAACCTCTGTCAACGCCTTG+CGG | + | chr5_3:55318244-55318263 | None:intergenic | 55.0% | |
| ! | AAGGCACCCAGTGGACCATT+GGG | - | chr5_3:55318339-55318358 | Msa0819190:CDS | 55.0% |
| !! | TGGACTGGCAGCTCTTGTTG+AGG | - | chr5_3:55319474-55319493 | Msa0819190:intron | 55.0% |
| AAAGGACCTGGAGGAGAAGG+TGG | + | chr5_3:55322240-55322259 | None:intergenic | 55.0% | |
| AAAGGACCTAGAGGAGGAGG+AGG | + | chr5_3:55322291-55322310 | None:intergenic | 55.0% | |
| GGAGGAGGAGGAAACAAAGG+AGG | + | chr5_3:55322333-55322352 | None:intergenic | 55.0% | |
| AAAGGACCTGGAGGAGAAGG+CGG | + | chr5_3:55322240-55322259 | None:intergenic | 55.0% | |
| TCTCCTTGACCTTCTCCTCC+AGG | - | chr5_3:55322378-55322397 | Msa0819190:CDS | 55.0% | |
| TATTGGGGAAGGAGTGGAGG+GGG | + | chr5_3:55322546-55322565 | None:intergenic | 55.0% | |
| TCCCTGCCAAAACCGCAAGG+CGG | - | chr5_3:55318302-55318321 | Msa0819190:CDS | 60.0% | |
| !! | ACCGCCTTGCGGTTTTGGCA+GGG | + | chr5_3:55318306-55318325 | None:intergenic | 60.0% |
| ! | GTGAGACCGCCTTGCGGTTT+TGG | + | chr5_3:55318311-55318330 | None:intergenic | 60.0% |
| AAACCGCAAGGCGGTCTCAC+TGG | - | chr5_3:55318311-55318330 | Msa0819190:CDS | 60.0% | |
| AACCGCAAGGCGGTCTCACT+GGG | - | chr5_3:55318312-55318331 | Msa0819190:CDS | 60.0% | |
| ! | CAAGGCACCCAGTGGACCAT+TGG | - | chr5_3:55318338-55318357 | Msa0819190:CDS | 60.0% |
| ACCCAGTGGACCATTGGGCA+GGG | - | chr5_3:55318344-55318363 | Msa0819190:CDS | 60.0% | |
| CTCCTCTCTCCCCTAGACGT+AGG | - | chr5_3:55318727-55318746 | Msa0819190:intron | 60.0% | |
| GACCTACGTCTAGGGGAGAG+AGG | + | chr5_3:55318732-55318751 | None:intergenic | 60.0% | |
| GCCGGCCGTCATTCACATTC+AGG | + | chr5_3:55319527-55319546 | None:intergenic | 60.0% | |
| GAATGTGAATGACGGCCGGC+TGG | - | chr5_3:55319527-55319546 | Msa0819190:intron | 60.0% | |
| ATCCCTCCACCTTCTCCTCC+AGG | - | chr5_3:55322231-55322250 | Msa0819190:intron | 60.0% | |
| GACCTGGAGGAGAAGGTGGA+GGG | + | chr5_3:55322236-55322255 | None:intergenic | 60.0% | |
| TCTCCTCGACCTTCTCCTCC+AGG | - | chr5_3:55322264-55322283 | Msa0819190:intron | 60.0% | |
| GGCGGAGGAGGAGGAAACAA+AGG | + | chr5_3:55322336-55322355 | None:intergenic | 60.0% | |
| GGACCTGGAGGAGAAGGTCA+AGG | + | chr5_3:55322384-55322403 | None:intergenic | 60.0% | |
| TTCTCCTCCAGGTCCTCCTC+CGG | - | chr5_3:55322275-55322294 | Msa0819190:intron | 60.0% | |
| AGTGGAGGGGGTGGATACTG+GGG | + | chr5_3:55322534-55322553 | None:intergenic | 60.0% | |
| GAGTGGAGGGGGTGGATACT+GGG | + | chr5_3:55322535-55322554 | None:intergenic | 60.0% | |
| !! | GACCGCCTTGCGGTTTTGGC+AGG | + | chr5_3:55318307-55318326 | None:intergenic | 65.0% |
| ACCGCAAGGCGGTCTCACTG+GGG | - | chr5_3:55318313-55318332 | Msa0819190:CDS | 65.0% | |
| ACCCCAGTGAGACCGCCTTG+CGG | + | chr5_3:55318317-55318336 | None:intergenic | 65.0% | |
| CACCCAGTGGACCATTGGGC+AGG | - | chr5_3:55318343-55318362 | Msa0819190:CDS | 65.0% | |
| CCCCTGCCCAATGGTCCACT+GGG | + | chr5_3:55318348-55318367 | None:intergenic | 65.0% | |
| CCCAGTGGACCATTGGGCAG+GGG | - | chr5_3:55318345-55318364 | Msa0819190:CDS | 65.0% | |
| ACCCCTGCCCAATGGTCCAC+TGG | + | chr5_3:55318349-55318368 | None:intergenic | 65.0% | |
| ! | GACCATTGGGCAGGGGTGCA+AGG | - | chr5_3:55318352-55318371 | Msa0819190:CDS | 65.0% |
| CACCTTGCACCCCTGCCCAA+TGG | + | chr5_3:55318357-55318376 | None:intergenic | 65.0% | |
| GGGTGCAAGGTGCAGGGACT+AGG | - | chr5_3:55318365-55318384 | Msa0819190:intron | 65.0% | |
| GGACCTGGAGGAGAAGGTGG+AGG | + | chr5_3:55322237-55322256 | None:intergenic | 65.0% | |
| GGACCTGGAGGAGAAGGTCG+AGG | + | chr5_3:55322270-55322289 | None:intergenic | 65.0% | |
| GGAGGAGGACCTGGAGGAGA+AGG | + | chr5_3:55322276-55322295 | None:intergenic | 65.0% | |
| AGAGGAGGAGGAGGACCTGG+AGG | + | chr5_3:55322282-55322301 | None:intergenic | 65.0% | |
| CCTAGAGGAGGAGGAGGACC+TGG | + | chr5_3:55322285-55322304 | None:intergenic | 65.0% | |
| CCAGGTCCTCCTCCTCCTCT+AGG | - | chr5_3:55322282-55322301 | Msa0819190:intron | 65.0% | |
| GGAGGAGGACCTGGAGGAGA+AGG | + | chr5_3:55322276-55322295 | None:intergenic | 65.0% | |
| TCTCCTCCAGGTCCTCCTCC+GGG | - | chr5_3:55322276-55322295 | Msa0819190:intron | 65.0% | |
| AAAGGACCCGGAGGAGGACC+TGG | + | chr5_3:55322399-55322418 | None:intergenic | 65.0% | |
| GGAGTGGAGGGGGTGGATAC+TGG | + | chr5_3:55322536-55322555 | None:intergenic | 65.0% | |
| GGCGGTCTCACTGGGGTGCA+AGG | - | chr5_3:55318320-55318339 | Msa0819190:CDS | 70.0% | |
| ! | CTGGGGTGCAAGGCACCCAG+TGG | - | chr5_3:55318330-55318349 | Msa0819190:CDS | 70.0% |
| ! | TGGGCAGGGGTGCAAGGTGC+AGG | - | chr5_3:55318358-55318377 | Msa0819190:intron | 70.0% |
| ! | GGGCAGGGGTGCAAGGTGCA+GGG | - | chr5_3:55318359-55318378 | Msa0819190:intron | 70.0% |
| GGAGGAGAAGGCGGAGGAGG+AGG | + | chr5_3:55322345-55322364 | None:intergenic | 70.0% | |
| CCTGGAGGAGAAGGCGGAGG+AGG | + | chr5_3:55322348-55322367 | None:intergenic | 70.0% | |
| CCTCCTCCGCCTTCTCCTCC+AGG | - | chr5_3:55322345-55322364 | Msa0819190:CDS | 70.0% | |
| GGACCTGGAGGAGAAGGCGG+AGG | + | chr5_3:55322351-55322370 | None:intergenic | 70.0% | |
| TGGGGAAGGAGTGGAGGGGG+TGG | + | chr5_3:55322543-55322562 | None:intergenic | 70.0% | |
| GGACCCGGAGGAGGACCTGG+AGG | + | chr5_3:55322396-55322415 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 55315801 | 55322664 | 55315801 | ID=Msa0819190;Name=Msa0819190 |
| chr5_3 | mRNA | 55315801 | 55322664 | 55315801 | ID=Msa0819190-mRNA-1;Parent=Msa0819190;Name=Msa0819190-mRNA-1;_AED=0.17;_eAED=0.17;_QI=233|0.62|0.77|0.88|0.75|0.77|9|0|324 |
| chr5_3 | exon | 55315801 | 55315806 | 55315801 | ID=Msa0819190-mRNA-1:exon:16827;Parent=Msa0819190-mRNA-1 |
| chr5_3 | exon | 55318136 | 55318204 | 55318136 | ID=Msa0819190-mRNA-1:exon:16826;Parent=Msa0819190-mRNA-1 |
| chr5_3 | exon | 55318290 | 55318372 | 55318290 | ID=Msa0819190-mRNA-1:exon:16825;Parent=Msa0819190-mRNA-1 |
| chr5_3 | exon | 55318467 | 55318545 | 55318467 | ID=Msa0819190-mRNA-1:exon:16824;Parent=Msa0819190-mRNA-1 |
| chr5_3 | exon | 55318970 | 55319134 | 55318970 | ID=Msa0819190-mRNA-1:exon:16823;Parent=Msa0819190-mRNA-1 |
| chr5_3 | exon | 55319233 | 55319277 | 55319233 | ID=Msa0819190-mRNA-1:exon:16822;Parent=Msa0819190-mRNA-1 |
| chr5_3 | exon | 55321201 | 55321376 | 55321201 | ID=Msa0819190-mRNA-1:exon:16821;Parent=Msa0819190-mRNA-1 |
| chr5_3 | exon | 55321512 | 55321722 | 55321512 | ID=Msa0819190-mRNA-1:exon:16820;Parent=Msa0819190-mRNA-1 |
| chr5_3 | exon | 55322294 | 55322664 | 55322294 | ID=Msa0819190-mRNA-1:exon:16819;Parent=Msa0819190-mRNA-1 |
| chr5_3 | five_prime_UTR | 55322432 | 55322664 | 55322432 | ID=Msa0819190-mRNA-1:five_prime_utr;Parent=Msa0819190-mRNA-1 |
| chr5_3 | CDS | 55322294 | 55322431 | 55322294 | ID=Msa0819190-mRNA-1:cds;Parent=Msa0819190-mRNA-1 |
| chr5_3 | CDS | 55321512 | 55321722 | 55321512 | ID=Msa0819190-mRNA-1:cds;Parent=Msa0819190-mRNA-1 |
| chr5_3 | CDS | 55321201 | 55321376 | 55321201 | ID=Msa0819190-mRNA-1:cds;Parent=Msa0819190-mRNA-1 |
| chr5_3 | CDS | 55319233 | 55319277 | 55319233 | ID=Msa0819190-mRNA-1:cds;Parent=Msa0819190-mRNA-1 |
| chr5_3 | CDS | 55318970 | 55319134 | 55318970 | ID=Msa0819190-mRNA-1:cds;Parent=Msa0819190-mRNA-1 |
| chr5_3 | CDS | 55318467 | 55318545 | 55318467 | ID=Msa0819190-mRNA-1:cds;Parent=Msa0819190-mRNA-1 |
| chr5_3 | CDS | 55318290 | 55318372 | 55318290 | ID=Msa0819190-mRNA-1:cds;Parent=Msa0819190-mRNA-1 |
| chr5_3 | CDS | 55318136 | 55318204 | 55318136 | ID=Msa0819190-mRNA-1:cds;Parent=Msa0819190-mRNA-1 |
| chr5_3 | CDS | 55315801 | 55315806 | 55315801 | ID=Msa0819190-mRNA-1:cds;Parent=Msa0819190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
