Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0783520 | XP_003616764.1 | 96.931 | 391 | 12 | 0 | 1 | 391 | 1 | 391 | 0.0 | 770 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0783520 | sp|P49572|TRPC_ARATH | 71.023 | 352 | 100 | 2 | 41 | 390 | 49 | 400 | 0.0 | 516 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0783520 | G7KH34 | 96.931 | 391 | 12 | 0 | 1 | 391 | 1 | 391 | 0.0 | 770 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0783520 | Msa0785430 | 0.828496 | 8.704977e-55 | -8.615850e-47 |
| Msa0783520 | Msa0819190 | 0.837175 | 6.069815e-57 | -8.615850e-47 |
| Msa0783520 | Msa0859300 | 0.858746 | 6.668440e-63 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0783520 | MtrunA17_Chr5g0438151 | 96.931 | 391 | 12 | 0 | 1 | 391 | 1 | 391 | 0.0 | 770 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0783520 | AT5G48220.1 | 72.966 | 381 | 94 | 4 | 10 | 390 | 7 | 378 | 0.0 | 568 |
| Msa0783520 | AT5G48220.3 | 78.994 | 338 | 70 | 1 | 53 | 390 | 27 | 363 | 0.0 | 565 |
| Msa0783520 | AT5G48220.4 | 81.270 | 315 | 59 | 0 | 76 | 390 | 1 | 315 | 0.0 | 549 |
| Msa0783520 | AT5G48220.2 | 81.270 | 315 | 59 | 0 | 76 | 390 | 1 | 315 | 0.0 | 549 |
| Msa0783520 | AT2G04400.1 | 71.023 | 352 | 100 | 2 | 41 | 390 | 49 | 400 | 0.0 | 516 |
Find 108 sgRNAs with CRISPR-Local
Find 336 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAGGGAAGCTTTGAAAATT+TGG | 0.165193 | 5_2:+67616040 | Msa0783520:intron |
| ATGCATAATATGCTATATTA+TGG | 0.178588 | 5_2:-67617826 | None:intergenic |
| GTTTAGATGGTTGGGGAATC+TGG | 0.247392 | 5_2:+67617117 | Msa0783520:intron |
| TTCTCCTTATTCTTATACCT+TGG | 0.277135 | 5_2:-67613672 | None:intergenic |
| GAACAAGAAGTGTTGTTAAA+AGG | 0.300213 | 5_2:-67612788 | None:intergenic |
| AGGGAATTCGATCGTGTTCT+TGG | 0.315417 | 5_2:+67616788 | Msa0783520:CDS |
| AGTTGGAGGAATAGTGGTTC+TGG | 0.317340 | 5_2:-67612974 | None:intergenic |
| CTACCCAAGGTATAAGAATA+AGG | 0.335290 | 5_2:+67613668 | Msa0783520:CDS |
| TGAAAATGCACCTCCTGTTC+GGG | 0.336397 | 5_2:+67613946 | Msa0783520:CDS |
| ATGGTTATGTTTAGATGGTT+GGG | 0.336646 | 5_2:+67617109 | Msa0783520:intron |
| TTACATAGGAGATTAAATTA+AGG | 0.337231 | 5_2:+67617628 | Msa0783520:three_prime_UTR |
| AAGGACTGCATCTGCACCTT+TGG | 0.337273 | 5_2:-67616245 | None:intergenic |
| AAAGGTCCTACATAATGATT+AGG | 0.338327 | 5_2:-67613712 | None:intergenic |
| TTGAAAATGCACCTCCTGTT+CGG | 0.344054 | 5_2:+67613945 | Msa0783520:CDS |
| AGATTGCTAATTCCCTTTCC+AGG | 0.344807 | 5_2:-67617570 | None:intergenic |
| TTCTGGTTCAAACATTGAAC+TGG | 0.357536 | 5_2:-67612693 | None:intergenic |
| AGAAAGAAAACCCCTTCTTA+TGG | 0.363149 | 5_2:+67613910 | Msa0783520:CDS |
| ATTGTAGCTGAACCTTCATT+AGG | 0.363772 | 5_2:-67613565 | None:intergenic |
| AGGAATAGTGGTTCTGGGAT+TGG | 0.374224 | 5_2:-67612968 | None:intergenic |
| TGTACATAAGCAATGTCTTC+AGG | 0.374331 | 5_2:-67617150 | None:intergenic |
| TCTCCTTATTCTTATACCTT+GGG | 0.386336 | 5_2:-67613671 | None:intergenic |
| TATTTCCCTCGTTCTGCAAC+CGG | 0.387527 | 5_2:-67613741 | None:intergenic |
| TATGGTTATGTTTAGATGGT+TGG | 0.396274 | 5_2:+67617108 | Msa0783520:intron |
| AATCAAGGATTCCATTGAAA+AGG | 0.396547 | 5_2:-67612905 | None:intergenic |
| AAGGGAATTAGCAATCTCTT+TGG | 0.397539 | 5_2:+67617576 | Msa0783520:CDS |
| GGAATCAACAATCGTAATCT+TGG | 0.405503 | 5_2:+67616833 | Msa0783520:CDS |
| GTTGGAGGAATAGTGGTTCT+GGG | 0.405718 | 5_2:-67612973 | None:intergenic |
| AAGGTCCTACATAATGATTA+GGG | 0.406698 | 5_2:-67613711 | None:intergenic |
| AAGTGTTGTTAAAAGGAAAC+AGG | 0.408506 | 5_2:-67612781 | None:intergenic |
| TAATGAACGAACTGGATTGC+CGG | 0.409949 | 5_2:+67613994 | Msa0783520:CDS |
| TGCATAATATGCTATATTAT+GGG | 0.414670 | 5_2:-67617825 | None:intergenic |
| GTAAAACAGCGGCAATTAGA+AGG | 0.423033 | 5_2:-67616264 | None:intergenic |
| TTGGAGTTAATAAGAAATGC+TGG | 0.428736 | 5_2:+67616059 | Msa0783520:CDS |
| TGAACAACAATCTGTAAAAT+CGG | 0.431510 | 5_2:+67612722 | Msa0783520:five_prime_UTR |
| GACTTGAGTTGGAGGAATAG+TGG | 0.436368 | 5_2:-67612980 | None:intergenic |
| CGATCGTGTTCTTGGAATAG+AGG | 0.438551 | 5_2:+67616796 | Msa0783520:CDS |
| GTTACCCTTGAGAGAAATCA+AGG | 0.441183 | 5_2:-67612920 | None:intergenic |
| GAAAACCCCTTCTTATGGTT+AGG | 0.442937 | 5_2:+67613915 | Msa0783520:CDS |
| ACCACGAAGAAGCTTCTTGA+AGG | 0.446760 | 5_2:+67616972 | Msa0783520:CDS |
| TCCTTCAAGAAGCTTCTTCG+TGG | 0.451429 | 5_2:-67616973 | None:intergenic |
| GGTTGAAGCTCTCAAAGTTA+AGG | 0.456983 | 5_2:+67613609 | Msa0783520:CDS |
| ATAGAGGGCGTTGAGCTCAT+TGG | 0.461415 | 5_2:+67616812 | Msa0783520:CDS |
| AATAAGAAATGCTGGAGTAA+AGG | 0.463960 | 5_2:+67616067 | Msa0783520:CDS |
| GTTAAGATATGCAAATTACT+TGG | 0.466429 | 5_2:+67616310 | Msa0783520:CDS |
| GATATGCAAATTACTTGGAC+TGG | 0.466507 | 5_2:+67616315 | Msa0783520:CDS |
| CTATAAGTATTGACTTGAGT+TGG | 0.466810 | 5_2:-67612991 | None:intergenic |
| TCTCTCAAGATGCCTCTACT+TGG | 0.471626 | 5_2:-67614046 | None:intergenic |
| AGTAGGAATGTTTCATAATG+AGG | 0.474718 | 5_2:+67613639 | Msa0783520:CDS |
| TTCTGCAACCGGAATTGAAA+AGG | 0.484408 | 5_2:-67613730 | None:intergenic |
| GCCCCAATAAAATCCCGAAC+AGG | 0.484947 | 5_2:-67613959 | None:intergenic |
| TGAATTCTTTGCACAACAAA+GGG | 0.485742 | 5_2:-67616189 | None:intergenic |
| ATTGTGAAACAAAGTGATCC+TGG | 0.486316 | 5_2:+67617552 | Msa0783520:CDS |
| GGAATCCTTGATTTCTCTCA+AGG | 0.486941 | 5_2:+67612915 | Msa0783520:CDS |
| AGGGCAGCTAATGAACGAAC+TGG | 0.487175 | 5_2:+67613986 | Msa0783520:CDS |
| AGCTCTCAAAGTTAAGGAAT+GGG | 0.487529 | 5_2:+67613615 | Msa0783520:CDS |
| GATTCCATTGAAAAGGGTAA+TGG | 0.491463 | 5_2:-67612898 | None:intergenic |
| AATGAACGAACTGGATTGCC+GGG | 0.495625 | 5_2:+67613995 | Msa0783520:CDS |
| GATTAGGTGGATCCTAATGA+AGG | 0.497924 | 5_2:+67613553 | Msa0783520:intron |
| AAGCTCTCAAAGTTAAGGAA+TGG | 0.499434 | 5_2:+67613614 | Msa0783520:CDS |
| ATCAAGGATTCCATTGAAAA+GGG | 0.501399 | 5_2:-67612904 | None:intergenic |
| TGGTTATGTTTAGATGGTTG+GGG | 0.503041 | 5_2:+67617110 | Msa0783520:intron |
| AAATACACCGCGTAACATCT+TGG | 0.503798 | 5_2:+67613759 | Msa0783520:CDS |
| ATTGCTCAATCTTATGAGAA+AGG | 0.508235 | 5_2:+67615838 | Msa0783520:CDS |
| ATAAGGAGAAGACCACCAAC+TGG | 0.508374 | 5_2:+67613685 | Msa0783520:CDS |
| TTGAGTTGACTGATTTACAT+AGG | 0.508462 | 5_2:+67617614 | Msa0783520:exon |
| ATGAATTCTTTGCACAACAA+AGG | 0.510154 | 5_2:-67616190 | None:intergenic |
| TTAGTACAAGCAAATACAAA+AGG | 0.511920 | 5_2:-67617668 | None:intergenic |
| TCAGCTACAATAGCCACATC+TGG | 0.513917 | 5_2:+67613577 | Msa0783520:CDS |
| TAAGTATTGACTTGAGTTGG+AGG | 0.516113 | 5_2:-67612988 | None:intergenic |
| CTCTACTATGCTCGATCCAA+AGG | 0.519675 | 5_2:+67616229 | Msa0783520:CDS |
| AAAGTTAAGGAATGGGAAGT+AGG | 0.522034 | 5_2:+67613622 | Msa0783520:CDS |
| CTGGGATTGGAAGAGAATGA+AGG | 0.522646 | 5_2:-67612955 | None:intergenic |
| ACCCCTTCTTATGGTTAGGA+AGG | 0.525971 | 5_2:+67613919 | Msa0783520:CDS |
| ATGTATTTGATGTCAAGATC+AGG | 0.527017 | 5_2:-67616286 | None:intergenic |
| AAGAATTCATCATAGATGCT+TGG | 0.527108 | 5_2:+67616203 | Msa0783520:CDS |
| TTGACTTCAGCAATCAATCC+CGG | 0.531405 | 5_2:-67614013 | None:intergenic |
| GGGCCTTCCTAACCATAAGA+AGG | 0.532318 | 5_2:-67613922 | None:intergenic |
| ATTGCTTATGTACAAGAAGC+AGG | 0.536943 | 5_2:+67617159 | Msa0783520:CDS |
| GGCCTTCCTAACCATAAGAA+GGG | 0.541500 | 5_2:-67613921 | None:intergenic |
| TGGGATTGGAAGAGAATGAA+GGG | 0.542184 | 5_2:-67612954 | None:intergenic |
| AAACAAAGTGATCCTGGAAA+GGG | 0.548778 | 5_2:+67617558 | Msa0783520:CDS |
| TAATGTAGGTGCACGATGAG+AGG | 0.562059 | 5_2:+67616768 | Msa0783520:intron |
| AATGTAGGTGCACGATGAGA+GGG | 0.565766 | 5_2:+67616769 | Msa0783520:intron |
| TCAATTCCGGTTGCAGAACG+AGG | 0.575802 | 5_2:+67613735 | Msa0783520:CDS |
| GATCGTGTTCTTGGAATAGA+GGG | 0.577340 | 5_2:+67616797 | Msa0783520:CDS |
| CCAATAAAATCCCGAACAGG+AGG | 0.579688 | 5_2:-67613956 | None:intergenic |
| ATTGATTGCTGAAGTCAAGA+AGG | 0.582300 | 5_2:+67614018 | Msa0783520:CDS |
| GAAACAAAGTGATCCTGGAA+AGG | 0.587322 | 5_2:+67617557 | Msa0783520:CDS |
| AATGAGGTTGCTGCTACCCA+AGG | 0.588159 | 5_2:+67613655 | Msa0783520:CDS |
| TTGTGTTGTTACATTTACAA+AGG | 0.591028 | 5_2:-67612810 | None:intergenic |
| CAATTCCGGTTGCAGAACGA+GGG | 0.593820 | 5_2:+67613736 | Msa0783520:CDS |
| TGATCTTGACATCAAATACA+TGG | 0.599333 | 5_2:+67616288 | Msa0783520:CDS |
| TGGACTGGCAGCTCTTGTTG+AGG | 0.600595 | 5_2:+67616330 | Msa0783520:CDS |
| GGAAGAGATTGTGTGGAACA+AGG | 0.601540 | 5_2:+67613780 | Msa0783520:CDS |
| TCTGGTTCAAACATTGAACT+GGG | 0.601830 | 5_2:-67612692 | None:intergenic |
| CAAGGACAAAGAAGTCGCGC+AGG | 0.602152 | 5_2:+67613798 | Msa0783520:CDS |
| AACCACAGATTCACCAGATG+TGG | 0.614744 | 5_2:-67613590 | None:intergenic |
| GCTCAATCTTATGAGAAAGG+TGG | 0.618974 | 5_2:+67615841 | Msa0783520:CDS |
| GCCTTCCTAACCATAAGAAG+GGG | 0.620205 | 5_2:-67613920 | None:intergenic |
| GAATCCTTGATTTCTCTCAA+GGG | 0.623977 | 5_2:+67612916 | Msa0783520:CDS |
| AAGAAGGCTTCACCAAGTAG+AGG | 0.628444 | 5_2:+67614034 | Msa0783520:CDS |
| AAGCTTCTTGAAGGAGAGCG+AGG | 0.630844 | 5_2:+67616981 | Msa0783520:CDS |
| GGTCCTACATAATGATTAGG+GGG | 0.633768 | 5_2:-67613709 | None:intergenic |
| ACATCTTGGAAGAGATTGTG+TGG | 0.641943 | 5_2:+67613773 | Msa0783520:CDS |
| AGCCACATCTGGTGAATCTG+TGG | 0.650573 | 5_2:+67613588 | Msa0783520:CDS |
| AGGTCCTACATAATGATTAG+GGG | 0.661433 | 5_2:-67613710 | None:intergenic |
| ATCTCTTCCAAGATGTTACG+CGG | 0.689323 | 5_2:-67613766 | None:intergenic |
| GTCAAGATCAGGTAAAACAG+CGG | 0.709047 | 5_2:-67616275 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACATTATAAAAAAATCAAAA+GGG | - | chr5_2:67613226-67613245 | None:intergenic | 10.0% |
| !! | AACATTATAAAAAAATCAAA+AGG | - | chr5_2:67613227-67613246 | None:intergenic | 10.0% |
| !! | TAACTATAAAAATTTGTATA+TGG | - | chr5_2:67617357-67617376 | None:intergenic | 10.0% |
| !!! | TTTGTTTTTTTGAGTTTAAT+TGG | + | chr5_2:67613195-67613214 | Msa0783520:intron | 15.0% |
| !!! | ATAATGTTTTTGTGATTATT+TGG | + | chr5_2:67613239-67613258 | Msa0783520:intron | 15.0% |
| !!! | ATTTTTTTGGTTTAATTTTG+AGG | + | chr5_2:67613380-67613399 | Msa0783520:intron | 15.0% |
| !! | ACCATTATATAAAACAAAAA+GGG | - | chr5_2:67613408-67613427 | None:intergenic | 15.0% |
| !! | AACCATTATATAAAACAAAA+AGG | - | chr5_2:67613409-67613428 | None:intergenic | 15.0% |
| !!! | TTGTTTTATATAATGGTTTT+TGG | + | chr5_2:67613411-67613430 | Msa0783520:intron | 15.0% |
| !!! | ATTATTTTCTGTTTTGATTA+AGG | + | chr5_2:67613434-67613453 | Msa0783520:intron | 15.0% |
| !!! | AAGTTTATTTTGTATAGTTA+CGG | - | chr5_2:67616572-67616591 | None:intergenic | 15.0% |
| !!! | GAAATTTTATGTTTTAATGT+AGG | + | chr5_2:67616754-67616773 | Msa0783520:intron | 15.0% |
| !! | TGTCTTAATATTTATACATA+AGG | + | chr5_2:67616882-67616901 | Msa0783520:intron | 15.0% |
| !!! | GATTTGTTATTTTGTTTGTA+TGG | - | chr5_2:67612762-67612781 | None:intergenic | 20.0% |
| !!! | TTTTTCGTTGTATATTTATC+TGG | + | chr5_2:67613090-67613109 | Msa0783520:intron | 20.0% |
| !!! | TTTTCGTTGTATATTTATCT+GGG | + | chr5_2:67613091-67613110 | Msa0783520:intron | 20.0% |
| !!! | ATTATTTGGTGTTATGATTA+TGG | + | chr5_2:67613253-67613272 | Msa0783520:intron | 20.0% |
| !!! | GTTGATGCATATTATTTTTT+TGG | + | chr5_2:67613367-67613386 | Msa0783520:intron | 20.0% |
| !!! | ATTTTTTGTGTTTAATTGTG+AGG | + | chr5_2:67613483-67613502 | Msa0783520:intron | 20.0% |
| !!! | GATTATTTGATGTTTTGATT+AGG | + | chr5_2:67613537-67613556 | Msa0783520:intron | 20.0% |
| !! | AGTTCATATTTACATTAACT+GGG | - | chr5_2:67614643-67614662 | None:intergenic | 20.0% |
| !! | AAGTTCATATTTACATTAAC+TGG | - | chr5_2:67614644-67614663 | None:intergenic | 20.0% |
| !! | ATGTAAATATGAACTTATGA+AGG | + | chr5_2:67614648-67614667 | Msa0783520:intron | 20.0% |
| !! | TAAAAAAGAAAAAACAGAAC+AGG | - | chr5_2:67614864-67614883 | None:intergenic | 20.0% |
| !!! | TGTTATTAAGTCGATTATTT+TGG | + | chr5_2:67614894-67614913 | Msa0783520:intron | 20.0% |
| !!! | GTTTGTTTTGTGAAATTTTA+AGG | - | chr5_2:67615040-67615059 | None:intergenic | 20.0% |
| !! | GAAAAAGAAATCTTAAATAG+TGG | - | chr5_2:67615268-67615287 | None:intergenic | 20.0% |
| !!! | TTTTATCATTCATTTCATAC+TGG | + | chr5_2:67615551-67615570 | Msa0783520:intron | 20.0% |
| !! | TACTTGCAAGTATAATAAAT+AGG | - | chr5_2:67616515-67616534 | None:intergenic | 20.0% |
| !!! | TTGGATTTATATCTTTCTTT+TGG | + | chr5_2:67616732-67616751 | Msa0783520:intron | 20.0% |
| !! | ACTTTAAACTGATGATTATA+TGG | + | chr5_2:67617090-67617109 | Msa0783520:intron | 20.0% |
| !! | ATTATATGGTTATGTTTAGA+TGG | + | chr5_2:67617104-67617123 | Msa0783520:intron | 20.0% |
| !! | TTACATAGGAGATTAAATTA+AGG | + | chr5_2:67617628-67617647 | Msa0783520:three_prime_UTR | 20.0% |
| !! | TGCATAATATGCTATATTAT+GGG | - | chr5_2:67617828-67617847 | None:intergenic | 20.0% |
| !! | ATGCATAATATGCTATATTA+TGG | - | chr5_2:67617829-67617848 | None:intergenic | 20.0% |
| ! | TGAACAACAATCTGTAAAAT+CGG | + | chr5_2:67612722-67612741 | Msa0783520:five_prime_UTR | 25.0% |
| !! | TTGTGTTGTTACATTTACAA+AGG | - | chr5_2:67612813-67612832 | None:intergenic | 25.0% |
| !!! | TGAATTTTTTGTAACTGAAG+AGG | - | chr5_2:67612841-67612860 | None:intergenic | 25.0% |
| ! | TTTCGTTGTATATTTATCTG+GGG | + | chr5_2:67613092-67613111 | Msa0783520:intron | 25.0% |
| !! | TGGTTTAGTTGAATTTTGAA+TGG | + | chr5_2:67613138-67613157 | Msa0783520:intron | 25.0% |
| !!! | GCCCTTTTTGTTTTATATAA+TGG | + | chr5_2:67613404-67613423 | Msa0783520:intron | 25.0% |
| ! | ATTAAGGTGTAGTATAATGA+AGG | + | chr5_2:67613450-67613469 | Msa0783520:intron | 25.0% |
| !! | AACATGATGGAAATCAAAAA+GGG | - | chr5_2:67613511-67613530 | None:intergenic | 25.0% |
| !! | AAACATGATGGAAATCAAAA+AGG | - | chr5_2:67613512-67613531 | None:intergenic | 25.0% |
| !! | TTGATTTCCATCATGTTTTA+TGG | + | chr5_2:67613514-67613533 | Msa0783520:intron | 25.0% |
| !! | TGATTTCCATCATGTTTTAT+GGG | + | chr5_2:67613515-67613534 | Msa0783520:intron | 25.0% |
| ! | AATAATCCCATAAAACATGA+TGG | - | chr5_2:67613524-67613543 | None:intergenic | 25.0% |
| !!! | TATTTGATGTTTTGATTAGG+TGG | + | chr5_2:67613540-67613559 | Msa0783520:intron | 25.0% |
| ! | AAGTTATTACTGATATCATG+TGG | + | chr5_2:67614148-67614167 | Msa0783520:intron | 25.0% |
| ! | AGTTATTACTGATATCATGT+GGG | + | chr5_2:67614149-67614168 | Msa0783520:intron | 25.0% |
| ! | ATTTAGCAGAGACAAATAAA+AGG | - | chr5_2:67614438-67614457 | None:intergenic | 25.0% |
| !!! | TTTTATTTGATTCATGCTTG+CGG | + | chr5_2:67614478-67614497 | Msa0783520:intron | 25.0% |
| ! | GTTCATATTTACATTAACTG+GGG | - | chr5_2:67614642-67614661 | None:intergenic | 25.0% |
| !! | TTATCAGTTGATATCAAGTA+CGG | + | chr5_2:67614752-67614771 | Msa0783520:intron | 25.0% |
| ! | CAAATGAACTTCCAAAAAAT+AGG | - | chr5_2:67614782-67614801 | None:intergenic | 25.0% |
| ! | GAAGAAATAAAAACTGACAA+TGG | - | chr5_2:67614978-67614997 | None:intergenic | 25.0% |
| !!! | GTTTTTATTTCTTCTCTTCA+CGG | + | chr5_2:67614984-67615003 | Msa0783520:intron | 25.0% |
| !!! | TGAATTGTTGATTCAGTTTT+GGG | + | chr5_2:67615128-67615147 | Msa0783520:intron | 25.0% |
| !!! | TAATATTTTGAGACCAAAAG+AGG | + | chr5_2:67615299-67615318 | Msa0783520:intron | 25.0% |
| !!! | AATATTTTGAGACCAAAAGA+GGG | + | chr5_2:67615300-67615319 | Msa0783520:intron | 25.0% |
| !!! | AACAGATGAGAAGTATTTTA+AGG | + | chr5_2:67615885-67615904 | Msa0783520:CDS | 25.0% |
| ! | CACTGCTAAATGTTAATATT+TGG | + | chr5_2:67615951-67615970 | Msa0783520:intron | 25.0% |
| ! | GTAGAATCAATCTTATATCA+AGG | - | chr5_2:67616116-67616135 | None:intergenic | 25.0% |
| !! | GGTCTATATAAAGTATTAGA+TGG | - | chr5_2:67616138-67616157 | None:intergenic | 25.0% |
| ! | GTTAAGATATGCAAATTACT+TGG | + | chr5_2:67616310-67616329 | Msa0783520:CDS | 25.0% |
| ! | AAATCAGTCATAACTATTCA+AGG | - | chr5_2:67616604-67616623 | None:intergenic | 25.0% |
| ! | TTCAACAGATATAAGAAACA+TGG | - | chr5_2:67616710-67616729 | None:intergenic | 25.0% |
| ! | TTCTTATATCTGTTGAATCT+TGG | + | chr5_2:67616713-67616732 | Msa0783520:intron | 25.0% |
| !!! | GTCAGATCTTTAAAATCATT+TGG | + | chr5_2:67617390-67617409 | Msa0783520:intron | 25.0% |
| !!! | TAATGTTTCTGATTTGTTGA+CGG | + | chr5_2:67617444-67617463 | Msa0783520:intron | 25.0% |
| ! | TTAGTACAAGCAAATACAAA+AGG | - | chr5_2:67617671-67617690 | None:intergenic | 25.0% |
| !! | ATTGTTGTTCATGCATTTTC+TGG | - | chr5_2:67612713-67612732 | None:intergenic | 30.0% |
| ! | AAGTGTTGTTAAAAGGAAAC+AGG | - | chr5_2:67612784-67612803 | None:intergenic | 30.0% |
| !! | GAACAAGAAGTGTTGTTAAA+AGG | - | chr5_2:67612791-67612810 | None:intergenic | 30.0% |
| ! | TTTTCCATTACCCTTTTCAA+TGG | + | chr5_2:67612894-67612913 | Msa0783520:exon | 30.0% |
| ATCAAGGATTCCATTGAAAA+GGG | - | chr5_2:67612907-67612926 | None:intergenic | 30.0% | |
| AATCAAGGATTCCATTGAAA+AGG | - | chr5_2:67612908-67612927 | None:intergenic | 30.0% | |
| !! | CTATAAGTATTGACTTGAGT+TGG | - | chr5_2:67612994-67613013 | None:intergenic | 30.0% |
| CAACGAAAAACAAGACAAAA+AGG | - | chr5_2:67613080-67613099 | None:intergenic | 30.0% | |
| !! | GTTCTCTCATTTTTCGTTTT+GGG | + | chr5_2:67613114-67613133 | Msa0783520:intron | 30.0% |
| !! | TTCTCTCATTTTTCGTTTTG+GGG | + | chr5_2:67613115-67613134 | Msa0783520:intron | 30.0% |
| !! | ATTTGGTGTTATGATTATGG+TGG | + | chr5_2:67613256-67613275 | Msa0783520:intron | 30.0% |
| ATCAACACAATTCACAAGAT+GGG | - | chr5_2:67613310-67613329 | None:intergenic | 30.0% | |
| AATCAACACAATTCACAAGA+TGG | - | chr5_2:67613311-67613330 | None:intergenic | 30.0% | |
| AGTAGGAATGTTTCATAATG+AGG | + | chr5_2:67613639-67613658 | Msa0783520:CDS | 30.0% | |
| TCTCCTTATTCTTATACCTT+GGG | - | chr5_2:67613674-67613693 | None:intergenic | 30.0% | |
| TTCTCCTTATTCTTATACCT+TGG | - | chr5_2:67613675-67613694 | None:intergenic | 30.0% | |
| AAGGTCCTACATAATGATTA+GGG | - | chr5_2:67613714-67613733 | None:intergenic | 30.0% | |
| AAAGGTCCTACATAATGATT+AGG | - | chr5_2:67613715-67613734 | None:intergenic | 30.0% | |
| TTGTGCTTATGTGAACTATT+TGG | + | chr5_2:67613875-67613894 | Msa0783520:intron | 30.0% | |
| GGAAATCAAAACAAACTTAC+TGG | - | chr5_2:67614082-67614101 | None:intergenic | 30.0% | |
| GATTCAGTGTTGTCAAATAA+CGG | + | chr5_2:67614205-67614224 | Msa0783520:intron | 30.0% | |
| TTTGACAACACTACTAAATC+AGG | - | chr5_2:67614280-67614299 | None:intergenic | 30.0% | |
| TTAGTAGTGTTGTCAAATAG+CGG | + | chr5_2:67614283-67614302 | Msa0783520:intron | 30.0% | |
| TTTAACCAACGAGATTCAAA+GGG | - | chr5_2:67614391-67614410 | None:intergenic | 30.0% | |
| !!! | TTGTTTTGATCATCTAATGC+AGG | + | chr5_2:67614536-67614555 | Msa0783520:intron | 30.0% |
| !!! | AGTACGGTATACCTATTTTT+TGG | + | chr5_2:67614768-67614787 | Msa0783520:intron | 30.0% |
| TGTTTCTCAATAACTAGTAC+AGG | + | chr5_2:67614800-67614819 | Msa0783520:intron | 30.0% | |
| !! | AGAAGTATTGCTTCAGAATA+AGG | + | chr5_2:67614837-67614856 | Msa0783520:intron | 30.0% |
| !! | GAAGTATTGCTTCAGAATAA+GGG | + | chr5_2:67614838-67614857 | Msa0783520:intron | 30.0% |
| TGTTTGATAAGTTGCTTGAA+GGG | - | chr5_2:67614955-67614974 | None:intergenic | 30.0% | |
| ! | ACGTTGAAGTTTGAAAGTTT+TGG | + | chr5_2:67615058-67615077 | Msa0783520:intron | 30.0% |
| !!! | CTGAATTGTTGATTCAGTTT+TGG | + | chr5_2:67615127-67615146 | Msa0783520:intron | 30.0% |
| ! | AAACACTTTTCATTCACCTT+GGG | + | chr5_2:67615384-67615403 | Msa0783520:intron | 30.0% |
| TGAAAAAGGGGTAGAAATTA+TGG | + | chr5_2:67615485-67615504 | Msa0783520:intron | 30.0% | |
| TCATTCATTTCATACTGGAT+TGG | + | chr5_2:67615556-67615575 | Msa0783520:intron | 30.0% | |
| TATTCTCTTACCTGTAATCT+TGG | + | chr5_2:67615653-67615672 | Msa0783520:intron | 30.0% | |
| CAAACATAATCCAAGATTAC+AGG | - | chr5_2:67615666-67615685 | None:intergenic | 30.0% | |
| ATGTGTGGAACAAATATCAA+AGG | - | chr5_2:67615755-67615774 | None:intergenic | 30.0% | |
| AGGTTGAATTCACAACATAA+TGG | + | chr5_2:67615795-67615814 | Msa0783520:intron | 30.0% | |
| ATTGCTCAATCTTATGAGAA+AGG | + | chr5_2:67615838-67615857 | Msa0783520:CDS | 30.0% | |
| !! | TGATTTGTGTTTTCTTGTTC+AGG | + | chr5_2:67616022-67616041 | Msa0783520:intron | 30.0% |
| ! | GATTTGTGTTTTCTTGTTCA+GGG | + | chr5_2:67616023-67616042 | Msa0783520:intron | 30.0% |
| TTGGAGTTAATAAGAAATGC+TGG | + | chr5_2:67616059-67616078 | Msa0783520:CDS | 30.0% | |
| AATAAGAAATGCTGGAGTAA+AGG | + | chr5_2:67616067-67616086 | Msa0783520:CDS | 30.0% | |
| TGAATTCTTTGCACAACAAA+GGG | - | chr5_2:67616192-67616211 | None:intergenic | 30.0% | |
| ATGAATTCTTTGCACAACAA+AGG | - | chr5_2:67616193-67616212 | None:intergenic | 30.0% | |
| AAGAATTCATCATAGATGCT+TGG | + | chr5_2:67616203-67616222 | Msa0783520:CDS | 30.0% | |
| ATGTATTTGATGTCAAGATC+AGG | - | chr5_2:67616289-67616308 | None:intergenic | 30.0% | |
| TGATCTTGACATCAAATACA+TGG | + | chr5_2:67616288-67616307 | Msa0783520:CDS | 30.0% | |
| !! | TTACGGTTCTGAAGTAAATT+TGG | - | chr5_2:67616555-67616574 | None:intergenic | 30.0% |
| TATGGTTATGTTTAGATGGT+TGG | + | chr5_2:67617108-67617127 | Msa0783520:intron | 30.0% | |
| ATGGTTATGTTTAGATGGTT+GGG | + | chr5_2:67617109-67617128 | Msa0783520:intron | 30.0% | |
| AAAATTAGGGACATCGATAT+TGG | - | chr5_2:67617320-67617339 | None:intergenic | 30.0% | |
| ! | TGTCAATTTTTCACAGGTTT+TGG | + | chr5_2:67617518-67617537 | Msa0783520:intron | 30.0% |
| !! | AATTTTTCACAGGTTTTGGT+GGG | + | chr5_2:67617522-67617541 | Msa0783520:intron | 30.0% |
| !! | TTGAGTTGACTGATTTACAT+AGG | + | chr5_2:67617614-67617633 | Msa0783520:exon | 30.0% |
| ! | TCTGGTTCAAACATTGAACT+GGG | - | chr5_2:67612695-67612714 | None:intergenic | 35.0% |
| !! | TTCTGGTTCAAACATTGAAC+TGG | - | chr5_2:67612696-67612715 | None:intergenic | 35.0% |
| GATTCCATTGAAAAGGGTAA+TGG | - | chr5_2:67612901-67612920 | None:intergenic | 35.0% | |
| GAATCCTTGATTTCTCTCAA+GGG | + | chr5_2:67612916-67612935 | Msa0783520:CDS | 35.0% | |
| !! | TAAGTATTGACTTGAGTTGG+AGG | - | chr5_2:67612991-67613010 | None:intergenic | 35.0% |
| !! | GGTTCTCTCATTTTTCGTTT+TGG | + | chr5_2:67613113-67613132 | Msa0783520:intron | 35.0% |
| GAATGGTATATGCGTTCAAT+TGG | + | chr5_2:67613155-67613174 | Msa0783520:intron | 35.0% | |
| TCAACACAATTCACAAGATG+GGG | - | chr5_2:67613309-67613328 | None:intergenic | 35.0% | |
| ATTGTAGCTGAACCTTCATT+AGG | - | chr5_2:67613568-67613587 | None:intergenic | 35.0% | |
| AAGCTCTCAAAGTTAAGGAA+TGG | + | chr5_2:67613614-67613633 | Msa0783520:CDS | 35.0% | |
| AGCTCTCAAAGTTAAGGAAT+GGG | + | chr5_2:67613615-67613634 | Msa0783520:CDS | 35.0% | |
| AAAGTTAAGGAATGGGAAGT+AGG | + | chr5_2:67613622-67613641 | Msa0783520:CDS | 35.0% | |
| CTACCCAAGGTATAAGAATA+AGG | + | chr5_2:67613668-67613687 | Msa0783520:CDS | 35.0% | |
| AGGTCCTACATAATGATTAG+GGG | - | chr5_2:67613713-67613732 | None:intergenic | 35.0% | |
| ! | ATGTAGGACCTTTTCAATTC+CGG | + | chr5_2:67613722-67613741 | Msa0783520:CDS | 35.0% |
| AGAAAGAAAACCCCTTCTTA+TGG | + | chr5_2:67613910-67613929 | Msa0783520:CDS | 35.0% | |
| ATTGATTGCTGAAGTCAAGA+AGG | + | chr5_2:67614018-67614037 | Msa0783520:CDS | 35.0% | |
| ! | CATGTGGGAAATGTTTGTTT+TGG | + | chr5_2:67614164-67614183 | Msa0783520:intron | 35.0% |
| TTAACCAACGAGATTCAAAG+GGG | - | chr5_2:67614390-67614409 | None:intergenic | 35.0% | |
| CTTTAACCAACGAGATTCAA+AGG | - | chr5_2:67614392-67614411 | None:intergenic | 35.0% | |
| TTATGCTTGTCTAAGTCATG+TGG | - | chr5_2:67614706-67614725 | None:intergenic | 35.0% | |
| CAATAACTAGTACAGGTTCA+TGG | + | chr5_2:67614807-67614826 | Msa0783520:intron | 35.0% | |
| TGATGCGATGCAAAAATACA+AGG | - | chr5_2:67614923-67614942 | None:intergenic | 35.0% | |
| GTGTTTGATAAGTTGCTTGA+AGG | - | chr5_2:67614956-67614975 | None:intergenic | 35.0% | |
| !! | TGAAAGTTTTGGTGCAAAAC+TGG | + | chr5_2:67615069-67615088 | Msa0783520:intron | 35.0% |
| ! | TTCCTAAAAGTTCCCTCTTT+TGG | - | chr5_2:67615315-67615334 | None:intergenic | 35.0% |
| !! | GGAACTTTTAGGAAACTTAG+AGG | + | chr5_2:67615321-67615340 | Msa0783520:intron | 35.0% |
| ! | GAAACACTTTTCATTCACCT+TGG | + | chr5_2:67615383-67615402 | Msa0783520:intron | 35.0% |
| TTTCTCTCTTGATTTCTCTC+AGG | + | chr5_2:67615439-67615458 | Msa0783520:intron | 35.0% | |
| CAATATTTGTTTCCCCAGTT+CGG | - | chr5_2:67615619-67615638 | None:intergenic | 35.0% | |
| GATTACAGGTAAGAGAATAG+AGG | - | chr5_2:67615652-67615671 | None:intergenic | 35.0% | |
| TGTTCCACACATCAAATTTG+TGG | + | chr5_2:67615763-67615782 | Msa0783520:intron | 35.0% | |
| !! | CATAATGGATTCTCTCTTAC+AGG | + | chr5_2:67615810-67615829 | Msa0783520:intron | 35.0% |
| !! | TCAGGGAAGCTTTGAAAATT+TGG | + | chr5_2:67616040-67616059 | Msa0783520:intron | 35.0% |
| CTTTATATAGACCATGCTGA+TGG | + | chr5_2:67616145-67616164 | Msa0783520:intron | 35.0% | |
| !!! | TTTTTTTAGTGCCATCAGCA+TGG | - | chr5_2:67616159-67616178 | None:intergenic | 35.0% |
| GATATGCAAATTACTTGGAC+TGG | + | chr5_2:67616315-67616334 | Msa0783520:CDS | 35.0% | |
| AAGAAATGTTGTATTCCAGC+CGG | - | chr5_2:67616401-67616420 | None:intergenic | 35.0% | |
| TGGTTCTCGTTTACAAAAGT+GGG | + | chr5_2:67616650-67616669 | Msa0783520:intron | 35.0% | |
| GGAATCAACAATCGTAATCT+TGG | + | chr5_2:67616833-67616852 | Msa0783520:CDS | 35.0% | |
| TGGTTATGTTTAGATGGTTG+GGG | + | chr5_2:67617110-67617129 | Msa0783520:intron | 35.0% | |
| TGTACATAAGCAATGTCTTC+AGG | - | chr5_2:67617153-67617172 | None:intergenic | 35.0% | |
| ATTGCTTATGTACAAGAAGC+AGG | + | chr5_2:67617159-67617178 | Msa0783520:CDS | 35.0% | |
| ! | CACTCTTGTCAATTTTTCAC+AGG | + | chr5_2:67617512-67617531 | Msa0783520:intron | 35.0% |
| !! | CAATTTTTCACAGGTTTTGG+TGG | + | chr5_2:67617521-67617540 | Msa0783520:intron | 35.0% |
| ATTGTGAAACAAAGTGATCC+TGG | + | chr5_2:67617552-67617571 | Msa0783520:CDS | 35.0% | |
| AAACAAAGTGATCCTGGAAA+GGG | + | chr5_2:67617558-67617577 | Msa0783520:CDS | 35.0% | |
| AAGGGAATTAGCAATCTCTT+TGG | + | chr5_2:67617576-67617595 | Msa0783520:CDS | 35.0% | |
| ! | GTCAACGCAAAAAGATGTTT+TGG | - | chr5_2:67617726-67617745 | None:intergenic | 35.0% |
| GGAATCCTTGATTTCTCTCA+AGG | + | chr5_2:67612915-67612934 | Msa0783520:CDS | 40.0% | |
| GTTACCCTTGAGAGAAATCA+AGG | - | chr5_2:67612923-67612942 | None:intergenic | 40.0% | |
| TGGGATTGGAAGAGAATGAA+GGG | - | chr5_2:67612957-67612976 | None:intergenic | 40.0% | |
| !!! | TCTCATTTTTCGTTTTGGGG+TGG | + | chr5_2:67613118-67613137 | Msa0783520:intron | 40.0% |
| GATTAGGTGGATCCTAATGA+AGG | + | chr5_2:67613553-67613572 | Msa0783520:intron | 40.0% | |
| GGTTGAAGCTCTCAAAGTTA+AGG | + | chr5_2:67613609-67613628 | Msa0783520:CDS | 40.0% | |
| GGTCCTACATAATGATTAGG+GGG | - | chr5_2:67613712-67613731 | None:intergenic | 40.0% | |
| TTCTGCAACCGGAATTGAAA+AGG | - | chr5_2:67613733-67613752 | None:intergenic | 40.0% | |
| AAATACACCGCGTAACATCT+TGG | + | chr5_2:67613759-67613778 | Msa0783520:CDS | 40.0% | |
| ATCTCTTCCAAGATGTTACG+CGG | - | chr5_2:67613769-67613788 | None:intergenic | 40.0% | |
| ACATCTTGGAAGAGATTGTG+TGG | + | chr5_2:67613773-67613792 | Msa0783520:CDS | 40.0% | |
| GAAAACCCCTTCTTATGGTT+AGG | + | chr5_2:67613915-67613934 | Msa0783520:CDS | 40.0% | |
| !! | AACAGGAGGTGCATTTTCAA+GGG | - | chr5_2:67613945-67613964 | None:intergenic | 40.0% |
| TTGAAAATGCACCTCCTGTT+CGG | + | chr5_2:67613945-67613964 | Msa0783520:CDS | 40.0% | |
| ! | CTCCTGTTCGGGATTTTATT+GGG | + | chr5_2:67613957-67613976 | Msa0783520:CDS | 40.0% |
| ! | TCCTGTTCGGGATTTTATTG+GGG | + | chr5_2:67613958-67613977 | Msa0783520:CDS | 40.0% |
| !! | GGATTTTATTGGGGCTCTAA+GGG | + | chr5_2:67613967-67613986 | Msa0783520:CDS | 40.0% |
| TAATGAACGAACTGGATTGC+CGG | + | chr5_2:67613994-67614013 | Msa0783520:CDS | 40.0% | |
| TTGACTTCAGCAATCAATCC+CGG | - | chr5_2:67614016-67614035 | None:intergenic | 40.0% | |
| GATTTCCACTGTGATCTTTG+AGG | + | chr5_2:67614095-67614114 | Msa0783520:intron | 40.0% | |
| GATAACCTCAAAGATCACAG+TGG | - | chr5_2:67614103-67614122 | None:intergenic | 40.0% | |
| !!! | ATGTTTGTTTTGGCTCCAAC+TGG | + | chr5_2:67614174-67614193 | Msa0783520:intron | 40.0% |
| CTGAATCAGATATAGCCAGT+TGG | - | chr5_2:67614192-67614211 | None:intergenic | 40.0% | |
| ! | AATAACGGCTCTAGCACTAT+AGG | + | chr5_2:67614220-67614239 | Msa0783520:intron | 40.0% |
| ! | ATAACGGCTCTAGCACTATA+GGG | + | chr5_2:67614221-67614240 | Msa0783520:intron | 40.0% |
| GCTATAACACTGTAGCATAG+CGG | + | chr5_2:67614316-67614335 | Msa0783520:intron | 40.0% | |
| ! | GAATCTCGTTGGTTAAAGTC+AGG | + | chr5_2:67614394-67614413 | Msa0783520:intron | 40.0% |
| GATAAGTTGCTTGAAGGGTT+TGG | - | chr5_2:67614950-67614969 | None:intergenic | 40.0% | |
| ! | GACCAAAAGAGGGAACTTTT+AGG | + | chr5_2:67615310-67615329 | Msa0783520:intron | 40.0% |
| TTTAGGAAACTTAGAGGCCA+AGG | + | chr5_2:67615327-67615346 | Msa0783520:intron | 40.0% | |
| TTAGGAAACTTAGAGGCCAA+GGG | + | chr5_2:67615328-67615347 | Msa0783520:intron | 40.0% | |
| !! | TGCTTTTGGGTGAGATTCTT+GGG | + | chr5_2:67615356-67615375 | Msa0783520:intron | 40.0% |
| TTTCTCTCAGGATCTCATTG+TGG | + | chr5_2:67615451-67615470 | Msa0783520:intron | 40.0% | |
| TTCTCTCAGGATCTCATTGT+GGG | + | chr5_2:67615452-67615471 | Msa0783520:intron | 40.0% | |
| ! | TGGGTTGAACGACTTGAAAA+AGG | + | chr5_2:67615471-67615490 | Msa0783520:intron | 40.0% |
| GGGTTGAACGACTTGAAAAA+GGG | + | chr5_2:67615472-67615491 | Msa0783520:intron | 40.0% | |
| GGTTGAACGACTTGAAAAAG+GGG | + | chr5_2:67615473-67615492 | Msa0783520:intron | 40.0% | |
| CGAACTGGGGAAACAAATAT+TGG | + | chr5_2:67615617-67615636 | Msa0783520:intron | 40.0% | |
| ! | TGTTGTTGCTTGAGACTGTT+TGG | + | chr5_2:67615719-67615738 | Msa0783520:intron | 40.0% |
| GCTTGAGACTGTTTGGTTAT+TGG | + | chr5_2:67615726-67615745 | Msa0783520:intron | 40.0% | |
| CAGACCACAAATTTGATGTG+TGG | - | chr5_2:67615770-67615789 | None:intergenic | 40.0% | |
| CACACATCAAATTTGTGGTC+TGG | + | chr5_2:67615768-67615787 | Msa0783520:intron | 40.0% | |
| ! | CAAATTTGTGGTCTGGTTTG+AGG | + | chr5_2:67615775-67615794 | Msa0783520:intron | 40.0% |
| GCTCAATCTTATGAGAAAGG+TGG | + | chr5_2:67615841-67615860 | Msa0783520:CDS | 40.0% | |
| GTAAAACAGCGGCAATTAGA+AGG | - | chr5_2:67616267-67616286 | None:intergenic | 40.0% | |
| GTCAAGATCAGGTAAAACAG+CGG | - | chr5_2:67616278-67616297 | None:intergenic | 40.0% | |
| TTGTAAACGAGAACCAGCTA+CGG | - | chr5_2:67616646-67616665 | None:intergenic | 40.0% | |
| ! | CTGGTTCTCGTTTACAAAAG+TGG | + | chr5_2:67616649-67616668 | Msa0783520:intron | 40.0% |
| GATCGTGTTCTTGGAATAGA+GGG | + | chr5_2:67616797-67616816 | Msa0783520:CDS | 40.0% | |
| !! | TGTGGCTTCTATTTTTCGTG+TGG | + | chr5_2:67616920-67616939 | Msa0783520:intron | 40.0% |
| TCATAAACACAACCACGATG+AGG | + | chr5_2:67617232-67617251 | Msa0783520:intron | 40.0% | |
| GAAACAAAGTGATCCTGGAA+AGG | + | chr5_2:67617557-67617576 | Msa0783520:CDS | 40.0% | |
| AGATTGCTAATTCCCTTTCC+AGG | - | chr5_2:67617573-67617592 | None:intergenic | 40.0% | |
| CTGGGATTGGAAGAGAATGA+AGG | - | chr5_2:67612958-67612977 | None:intergenic | 45.0% | |
| !! | AGGAATAGTGGTTCTGGGAT+TGG | - | chr5_2:67612971-67612990 | None:intergenic | 45.0% |
| GTTGGAGGAATAGTGGTTCT+GGG | - | chr5_2:67612976-67612995 | None:intergenic | 45.0% | |
| AGTTGGAGGAATAGTGGTTC+TGG | - | chr5_2:67612977-67612996 | None:intergenic | 45.0% | |
| !! | GACTTGAGTTGGAGGAATAG+TGG | - | chr5_2:67612983-67613002 | None:intergenic | 45.0% |
| ! | TACGTTTTCTGTTCGAGCAC+AGG | + | chr5_2:67613029-67613048 | Msa0783520:CDS | 45.0% |
| TCAGCTACAATAGCCACATC+TGG | + | chr5_2:67613577-67613596 | Msa0783520:CDS | 45.0% | |
| AACCACAGATTCACCAGATG+TGG | - | chr5_2:67613593-67613612 | None:intergenic | 45.0% | |
| ATAAGGAGAAGACCACCAAC+TGG | + | chr5_2:67613685-67613704 | Msa0783520:CDS | 45.0% | |
| TAATGATTAGGGGGTCCAGT+TGG | - | chr5_2:67613703-67613722 | None:intergenic | 45.0% | |
| GGACCCCCTAATCATTATGT+AGG | + | chr5_2:67613706-67613725 | Msa0783520:CDS | 45.0% | |
| TATTTCCCTCGTTCTGCAAC+CGG | - | chr5_2:67613744-67613763 | None:intergenic | 45.0% | |
| GGAAGAGATTGTGTGGAACA+AGG | + | chr5_2:67613780-67613799 | Msa0783520:CDS | 45.0% | |
| ACCCCTTCTTATGGTTAGGA+AGG | + | chr5_2:67613919-67613938 | Msa0783520:CDS | 45.0% | |
| GCCTTCCTAACCATAAGAAG+GGG | - | chr5_2:67613923-67613942 | None:intergenic | 45.0% | |
| GGCCTTCCTAACCATAAGAA+GGG | - | chr5_2:67613924-67613943 | None:intergenic | 45.0% | |
| !! | GAACAGGAGGTGCATTTTCA+AGG | - | chr5_2:67613946-67613965 | None:intergenic | 45.0% |
| TGAAAATGCACCTCCTGTTC+GGG | + | chr5_2:67613946-67613965 | Msa0783520:CDS | 45.0% | |
| CCAATAAAATCCCGAACAGG+AGG | - | chr5_2:67613959-67613978 | None:intergenic | 45.0% | |
| ! | CCTCCTGTTCGGGATTTTAT+TGG | + | chr5_2:67613956-67613975 | Msa0783520:CDS | 45.0% |
| ! | GGGATTTTATTGGGGCTCTA+AGG | + | chr5_2:67613966-67613985 | Msa0783520:CDS | 45.0% |
| AATGAACGAACTGGATTGCC+GGG | + | chr5_2:67613995-67614014 | Msa0783520:CDS | 45.0% | |
| AAGAAGGCTTCACCAAGTAG+AGG | + | chr5_2:67614034-67614053 | Msa0783520:CDS | 45.0% | |
| TCTCTCAAGATGCCTCTACT+TGG | - | chr5_2:67614049-67614068 | None:intergenic | 45.0% | |
| TAGACCCCTTTGAATCTCGT+TGG | + | chr5_2:67614383-67614402 | Msa0783520:intron | 45.0% | |
| CAAAACTGGTCATTTCCGCA+AGG | + | chr5_2:67615083-67615102 | Msa0783520:intron | 45.0% | |
| ! | GCCAAGGGTTAAGTGCTTTT+GGG | + | chr5_2:67615343-67615362 | Msa0783520:intron | 45.0% |
| !! | ACCCAAAAGCACTTAACCCT+TGG | - | chr5_2:67615347-67615366 | None:intergenic | 45.0% |
| !! | GTGCTTTTGGGTGAGATTCT+TGG | + | chr5_2:67615355-67615374 | Msa0783520:intron | 45.0% |
| TTTGGGTGAGATTCTTGGGT+TGG | + | chr5_2:67615360-67615379 | Msa0783520:intron | 45.0% | |
| TTGGGTGAGATTCTTGGGTT+GGG | + | chr5_2:67615361-67615380 | Msa0783520:intron | 45.0% | |
| ! | CACTTTTCATTCACCTTGGG+TGG | + | chr5_2:67615387-67615406 | Msa0783520:intron | 45.0% |
| TAATGAGATCTCACCACCCA+AGG | - | chr5_2:67615403-67615422 | None:intergenic | 45.0% | |
| GGTGGTGAGATCTCATTAGA+GGG | + | chr5_2:67615405-67615424 | Msa0783520:intron | 45.0% | |
| CCAATATGACCTACGTCTAG+GGG | - | chr5_2:67615595-67615614 | None:intergenic | 45.0% | |
| CCCAATATGACCTACGTCTA+GGG | - | chr5_2:67615596-67615615 | None:intergenic | 45.0% | |
| CCCTAGACGTAGGTCATATT+GGG | + | chr5_2:67615593-67615612 | Msa0783520:intron | 45.0% | |
| CTCTACTATGCTCGATCCAA+AGG | + | chr5_2:67616229-67616248 | Msa0783520:CDS | 45.0% | |
| TCCTGAATGTGAATGACGTC+CGG | + | chr5_2:67616379-67616398 | Msa0783520:intron | 45.0% | |
| TAATGTAGGTGCACGATGAG+AGG | + | chr5_2:67616768-67616787 | Msa0783520:intron | 45.0% | |
| AATGTAGGTGCACGATGAGA+GGG | + | chr5_2:67616769-67616788 | Msa0783520:intron | 45.0% | |
| AGGGAATTCGATCGTGTTCT+TGG | + | chr5_2:67616788-67616807 | Msa0783520:CDS | 45.0% | |
| CGATCGTGTTCTTGGAATAG+AGG | + | chr5_2:67616796-67616815 | Msa0783520:CDS | 45.0% | |
| ACCACGAAGAAGCTTCTTGA+AGG | + | chr5_2:67616972-67616991 | Msa0783520:CDS | 45.0% | |
| TCCTTCAAGAAGCTTCTTCG+TGG | - | chr5_2:67616976-67616995 | None:intergenic | 45.0% | |
| GTTTAGATGGTTGGGGAATC+TGG | + | chr5_2:67617117-67617136 | Msa0783520:intron | 45.0% | |
| CATAAGCTAAAGCCTCATCG+TGG | - | chr5_2:67617247-67617266 | None:intergenic | 45.0% | |
| !! | ATAAATCTAAATTAAAATTA+GGG | - | chr5_2:67617333-67617352 | None:intergenic | 5.0% |
| !! | TATAAATCTAAATTAAAATT+AGG | - | chr5_2:67617334-67617353 | None:intergenic | 5.0% |
| AGCCACATCTGGTGAATCTG+TGG | + | chr5_2:67613588-67613607 | Msa0783520:CDS | 50.0% | |
| AATGAGGTTGCTGCTACCCA+AGG | + | chr5_2:67613655-67613674 | Msa0783520:CDS | 50.0% | |
| TCAATTCCGGTTGCAGAACG+AGG | + | chr5_2:67613735-67613754 | Msa0783520:CDS | 50.0% | |
| CAATTCCGGTTGCAGAACGA+GGG | + | chr5_2:67613736-67613755 | Msa0783520:CDS | 50.0% | |
| GGGCCTTCCTAACCATAAGA+AGG | - | chr5_2:67613925-67613944 | None:intergenic | 50.0% | |
| GCCCCAATAAAATCCCGAAC+AGG | - | chr5_2:67613962-67613981 | None:intergenic | 50.0% | |
| AGGGCAGCTAATGAACGAAC+TGG | + | chr5_2:67613986-67614005 | Msa0783520:CDS | 50.0% | |
| GCTCTAGCACTATAGGGTAG+TGG | + | chr5_2:67614227-67614246 | Msa0783520:intron | 50.0% | |
| ACACACAACACGCTAAACGG+TGG | - | chr5_2:67615016-67615035 | None:intergenic | 50.0% | |
| GGCACACACAACACGCTAAA+CGG | - | chr5_2:67615019-67615038 | None:intergenic | 50.0% | |
| ! | TTTTCCCTGCCAAAACCGCA+AGG | + | chr5_2:67615156-67615175 | Msa0783520:intron | 50.0% |
| ! | GGCCAAGGGTTAAGTGCTTT+TGG | + | chr5_2:67615342-67615361 | Msa0783520:intron | 50.0% |
| GGGTGGTGAGATCTCATTAG+AGG | + | chr5_2:67615404-67615423 | Msa0783520:intron | 50.0% | |
| CCCCTAGACGTAGGTCATAT+TGG | + | chr5_2:67615592-67615611 | Msa0783520:intron | 50.0% | |
| GCCCAATATGACCTACGTCT+AGG | - | chr5_2:67615597-67615616 | None:intergenic | 50.0% | |
| TAGGTCATATTGGGCCGAAC+TGG | + | chr5_2:67615602-67615621 | Msa0783520:intron | 50.0% | |
| AGGTCATATTGGGCCGAACT+GGG | + | chr5_2:67615603-67615622 | Msa0783520:intron | 50.0% | |
| AAGGACTGCATCTGCACCTT+TGG | - | chr5_2:67616248-67616267 | None:intergenic | 50.0% | |
| TGTGATACCTACACCGTAGC+TGG | + | chr5_2:67616630-67616649 | Msa0783520:intron | 50.0% | |
| !! | ATAGAGGGCGTTGAGCTCAT+TGG | + | chr5_2:67616812-67616831 | Msa0783520:CDS | 50.0% |
| AGGACCTGAGTCATCAACTG+TGG | + | chr5_2:67616902-67616921 | Msa0783520:intron | 50.0% | |
| !! | GAAGCCACAGTTGATGACTC+AGG | - | chr5_2:67616909-67616928 | None:intergenic | 50.0% |
| AAGCTTCTTGAAGGAGAGCG+AGG | + | chr5_2:67616981-67617000 | Msa0783520:CDS | 50.0% | |
| TGATTAGGGGGTCCAGTTGG+TGG | - | chr5_2:67613700-67613719 | None:intergenic | 55.0% | |
| CAAGGACAAAGAAGTCGCGC+AGG | + | chr5_2:67613798-67613817 | Msa0783520:CDS | 55.0% | |
| !! | TTTCCGCAAGGCGTTGACAG+AGG | + | chr5_2:67615095-67615114 | Msa0783520:intron | 55.0% |
| !! | TTCCGCAAGGCGTTGACAGA+GGG | + | chr5_2:67615096-67615115 | Msa0783520:intron | 55.0% |
| ! | AAGGCACCCAGTGGACCATT+GGG | + | chr5_2:67615196-67615215 | Msa0783520:intron | 55.0% |
| GGTCATATTGGGCCGAACTG+GGG | + | chr5_2:67615604-67615623 | Msa0783520:intron | 55.0% | |
| !! | TGGACTGGCAGCTCTTGTTG+AGG | + | chr5_2:67616330-67616349 | Msa0783520:CDS | 55.0% |
| GCCGGACGTCATTCACATTC+AGG | - | chr5_2:67616383-67616402 | None:intergenic | 55.0% | |
| GAATGTGAATGACGTCCGGC+TGG | + | chr5_2:67616383-67616402 | Msa0783520:intron | 55.0% | |
| ACGAGAACCAGCTACGGTGT+AGG | - | chr5_2:67616640-67616659 | None:intergenic | 55.0% | |
| !! | TCCGCAAGGCGTTGACAGAG+GGG | + | chr5_2:67615097-67615116 | Msa0783520:intron | 60.0% |
| TCCCTGCCAAAACCGCAAGG+CGG | + | chr5_2:67615159-67615178 | Msa0783520:intron | 60.0% | |
| !! | ACCGCCTTGCGGTTTTGGCA+GGG | - | chr5_2:67615163-67615182 | None:intergenic | 60.0% |
| ! | GTGAGACCGCCTTGCGGTTT+TGG | - | chr5_2:67615168-67615187 | None:intergenic | 60.0% |
| AAACCGCAAGGCGGTCTCAC+TGG | + | chr5_2:67615168-67615187 | Msa0783520:intron | 60.0% | |
| AACCGCAAGGCGGTCTCACT+GGG | + | chr5_2:67615169-67615188 | Msa0783520:intron | 60.0% | |
| ! | CAAGGCACCCAGTGGACCAT+TGG | + | chr5_2:67615195-67615214 | Msa0783520:intron | 60.0% |
| ACCCAGTGGACCATTGGGCA+GGG | + | chr5_2:67615201-67615220 | Msa0783520:intron | 60.0% | |
| CTCCTCTCTCCCCTAGACGT+AGG | + | chr5_2:67615583-67615602 | Msa0783520:intron | 60.0% | |
| GACCTACGTCTAGGGGAGAG+AGG | - | chr5_2:67615588-67615607 | None:intergenic | 60.0% | |
| GCCCCTCTGTCAACGCCTTG+CGG | - | chr5_2:67615101-67615120 | None:intergenic | 65.0% | |
| !! | GACCGCCTTGCGGTTTTGGC+AGG | - | chr5_2:67615164-67615183 | None:intergenic | 65.0% |
| ACCGCAAGGCGGTCTCACTG+GGG | + | chr5_2:67615170-67615189 | Msa0783520:intron | 65.0% | |
| ACCCCAGTGAGACCGCCTTG+CGG | - | chr5_2:67615174-67615193 | None:intergenic | 65.0% | |
| CACCCAGTGGACCATTGGGC+AGG | + | chr5_2:67615200-67615219 | Msa0783520:intron | 65.0% | |
| CCCCTGCCCAATGGTCCACT+GGG | - | chr5_2:67615205-67615224 | None:intergenic | 65.0% | |
| CCCAGTGGACCATTGGGCAG+GGG | + | chr5_2:67615202-67615221 | Msa0783520:intron | 65.0% | |
| ACCCCTGCCCAATGGTCCAC+TGG | - | chr5_2:67615206-67615225 | None:intergenic | 65.0% | |
| ! | GACCATTGGGCAGGGGTGCA+AGG | + | chr5_2:67615209-67615228 | Msa0783520:intron | 65.0% |
| CACCTTGCACCCCTGCCCAA+TGG | - | chr5_2:67615214-67615233 | None:intergenic | 65.0% | |
| GGGTGCAAGGTGCAGGGACT+AGG | + | chr5_2:67615222-67615241 | Msa0783520:intron | 65.0% | |
| GGCGGTCTCACTGGGGTGCA+AGG | + | chr5_2:67615177-67615196 | Msa0783520:intron | 70.0% | |
| ! | CTGGGGTGCAAGGCACCCAG+TGG | + | chr5_2:67615187-67615206 | Msa0783520:intron | 70.0% |
| ! | TGGGCAGGGGTGCAAGGTGC+AGG | + | chr5_2:67615215-67615234 | Msa0783520:intron | 70.0% |
| ! | GGGCAGGGGTGCAAGGTGCA+GGG | + | chr5_2:67615216-67615235 | Msa0783520:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 67612682 | 67617881 | 67612682 | ID=Msa0783520;Name=Msa0783520 |
| chr5_2 | mRNA | 67612682 | 67617881 | 67612682 | ID=Msa0783520-mRNA-1;Parent=Msa0783520;Name=Msa0783520-mRNA-1;_AED=0.02;_eAED=0.02;_QI=231|1|1|1|1|1|10|264|391 |
| chr5_2 | exon | 67612682 | 67613050 | 67612682 | ID=Msa0783520-mRNA-1:exon:20243;Parent=Msa0783520-mRNA-1 |
| chr5_2 | exon | 67613559 | 67613819 | 67613559 | ID=Msa0783520-mRNA-1:exon:20244;Parent=Msa0783520-mRNA-1 |
| chr5_2 | exon | 67613905 | 67614081 | 67613905 | ID=Msa0783520-mRNA-1:exon:20245;Parent=Msa0783520-mRNA-1 |
| chr5_2 | exon | 67615832 | 67615906 | 67615832 | ID=Msa0783520-mRNA-1:exon:20246;Parent=Msa0783520-mRNA-1 |
| chr5_2 | exon | 67616044 | 67616088 | 67616044 | ID=Msa0783520-mRNA-1:exon:20247;Parent=Msa0783520-mRNA-1 |
| chr5_2 | exon | 67616187 | 67616351 | 67616187 | ID=Msa0783520-mRNA-1:exon:20248;Parent=Msa0783520-mRNA-1 |
| chr5_2 | exon | 67616776 | 67616854 | 67616776 | ID=Msa0783520-mRNA-1:exon:20249;Parent=Msa0783520-mRNA-1 |
| chr5_2 | exon | 67616949 | 67617031 | 67616949 | ID=Msa0783520-mRNA-1:exon:20250;Parent=Msa0783520-mRNA-1 |
| chr5_2 | exon | 67617123 | 67617191 | 67617123 | ID=Msa0783520-mRNA-1:exon:20251;Parent=Msa0783520-mRNA-1 |
| chr5_2 | exon | 67617534 | 67617881 | 67617534 | ID=Msa0783520-mRNA-1:exon:20252;Parent=Msa0783520-mRNA-1 |
| chr5_2 | five_prime_UTR | 67612682 | 67612912 | 67612682 | ID=Msa0783520-mRNA-1:five_prime_utr;Parent=Msa0783520-mRNA-1 |
| chr5_2 | CDS | 67612913 | 67613050 | 67612913 | ID=Msa0783520-mRNA-1:cds;Parent=Msa0783520-mRNA-1 |
| chr5_2 | CDS | 67613559 | 67613819 | 67613559 | ID=Msa0783520-mRNA-1:cds;Parent=Msa0783520-mRNA-1 |
| chr5_2 | CDS | 67613905 | 67614081 | 67613905 | ID=Msa0783520-mRNA-1:cds;Parent=Msa0783520-mRNA-1 |
| chr5_2 | CDS | 67615832 | 67615906 | 67615832 | ID=Msa0783520-mRNA-1:cds;Parent=Msa0783520-mRNA-1 |
| chr5_2 | CDS | 67616044 | 67616088 | 67616044 | ID=Msa0783520-mRNA-1:cds;Parent=Msa0783520-mRNA-1 |
| chr5_2 | CDS | 67616187 | 67616351 | 67616187 | ID=Msa0783520-mRNA-1:cds;Parent=Msa0783520-mRNA-1 |
| chr5_2 | CDS | 67616776 | 67616854 | 67616776 | ID=Msa0783520-mRNA-1:cds;Parent=Msa0783520-mRNA-1 |
| chr5_2 | CDS | 67616949 | 67617031 | 67616949 | ID=Msa0783520-mRNA-1:cds;Parent=Msa0783520-mRNA-1 |
| chr5_2 | CDS | 67617123 | 67617191 | 67617123 | ID=Msa0783520-mRNA-1:cds;Parent=Msa0783520-mRNA-1 |
| chr5_2 | CDS | 67617534 | 67617617 | 67617534 | ID=Msa0783520-mRNA-1:cds;Parent=Msa0783520-mRNA-1 |
| chr5_2 | three_prime_UTR | 67617618 | 67617881 | 67617618 | ID=Msa0783520-mRNA-1:three_prime_utr;Parent=Msa0783520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
