AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0823600

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0823600 MtrunA17_Chr5g0444331 92.517 441 33 0 28 468 2 442 0.0 843
Msa0823600 MtrunA17_Chr5g0443871 65.766 444 151 1 26 468 4 447 0.0 587
Msa0823600 MtrunA17_Chr5g0443941 65.463 443 152 1 27 468 5 447 0.0 586
Msa0823600 MtrunA17_Chr5g0443931 62.955 440 162 1 30 468 8 447 0.0 552
Msa0823600 MtrunA17_Chr5g0443851 60.660 394 147 3 62 453 39 426 2.94e-170 489
Msa0823600 MtrunA17_Chr5g0443861 57.805 410 155 3 62 456 41 447 3.08e-165 477
Msa0823600 MtrunA17_Chr5g0443751 58.867 406 150 4 75 468 7 407 1.98e-164 474
Msa0823600 MtrunA17_Chr5g0443771 68.078 307 93 3 163 468 1 303 1.30e-145 422
Msa0823600 MtrunA17_Chr8g0360991 39.678 373 185 11 38 386 16 372 1.28e-65 229
Msa0823600 MtrunA17_Chr3g0100261 37.366 372 201 10 37 388 15 374 3.21e-56 201
Msa0823600 MtrunA17_Chr3g0099591 37.971 345 187 8 66 388 36 375 1.49e-54 197
Msa0823600 MtrunA17_Chr3g0099571 38.109 349 188 9 63 388 33 376 1.62e-54 196
Msa0823600 MtrunA17_Chr5g0443831 59.603 151 55 3 294 439 88 237 1.40e-51 174
Msa0823600 MtrunA17_Chr5g0443831 54.217 83 37 1 121 203 35 116 1.47e-21 93.6
Msa0823600 MtrunA17_Chr5g0439121 37.069 348 191 9 60 386 29 369 1.46e-50 185
Msa0823600 MtrunA17_Chr3g0108011 31.620 389 230 10 63 429 69 443 4.46e-46 172
Msa0823600 MtrunA17_Chr3g0108151 32.951 349 209 6 60 387 31 375 3.93e-45 169
Msa0823600 MtrunA17_Chr3g0108821 33.819 343 208 6 60 387 30 368 6.73e-44 166
Msa0823600 MtrunA17_Chr1g0160951 37.712 236 141 3 151 384 34 265 1.38e-43 164
Msa0823600 MtrunA17_Chr3g0108171 34.000 350 206 6 60 388 48 393 2.08e-43 164
Msa0823600 MtrunA17_Chr3g0108811 32.464 345 210 8 60 387 42 380 3.70e-43 163
Msa0823600 MtrunA17_Chr3g0105551 30.978 368 219 9 44 388 11 366 7.07e-43 162
Msa0823600 MtrunA17_Chr3g0107181 31.429 350 218 8 60 392 18 362 1.81e-42 161
Msa0823600 MtrunA17_Chr3g0097031 32.000 325 190 8 84 387 3 317 5.06e-42 157
Msa0823600 MtrunA17_Chr3g0105571 32.268 313 183 7 96 388 17 320 8.32e-42 156
Msa0823600 MtrunA17_Chr3g0107931 32.081 346 212 7 60 388 53 392 1.29e-41 159
Msa0823600 MtrunA17_Chr7g0229721 32.857 350 203 9 60 388 30 368 5.46e-41 157
Msa0823600 MtrunA17_Chr3g0107621 32.277 347 208 7 60 387 30 368 8.04e-41 153
Msa0823600 MtrunA17_Chr5g0443761 38.158 228 133 4 154 380 1 221 1.20e-40 155
Msa0823600 MtrunA17_Chr3g0096721 32.286 350 197 9 60 384 30 364 2.31e-40 155
Msa0823600 MtrunA17_Chr7g0229751 37.344 241 144 5 151 388 85 321 1.16e-39 152
Msa0823600 MtrunA17_Chr3g0105521 36.515 241 145 5 151 388 18 253 4.06e-39 151
Msa0823600 MtrunA17_Chr3g0096821 29.944 354 208 7 60 388 26 364 1.16e-38 150
Msa0823600 MtrunA17_Chr3g0105621 32.609 322 188 7 87 388 8 320 1.29e-38 147
Msa0823600 MtrunA17_Chr3g0091861 36.327 245 149 5 147 388 70 310 8.57e-38 147
Msa0823600 MtrunA17_Chr2g0313481 28.947 380 228 9 28 383 8 369 1.14e-36 144
Msa0823600 MtrunA17_Chr3g0107211 31.124 347 211 8 60 384 30 370 2.41e-36 143
Msa0823600 MtrunA17_Chr5g0443781 58.261 115 41 1 342 456 108 215 3.67e-36 136
Msa0823600 MtrunA17_Chr5g0443781 55.372 121 54 0 26 146 4 124 8.52e-35 132
Msa0823600 MtrunA17_Chr3g0091851 33.212 274 172 6 147 414 70 338 3.12e-34 137
Msa0823600 MtrunA17_Chr2g0313491 27.891 441 266 14 59 456 28 459 8.20e-34 135
Msa0823600 MtrunA17_Chr3g0105481 32.609 322 188 8 87 388 8 320 1.22e-33 135
Msa0823600 MtrunA17_Chr5g0414911 36.530 219 134 3 167 385 162 375 1.28e-33 135
Msa0823600 MtrunA17_Chr2g0313461 28.010 382 229 10 28 383 8 369 1.81e-33 134
Msa0823600 MtrunA17_Chr3g0097641 34.855 241 149 5 147 384 104 339 1.95e-33 134
Msa0823600 MtrunA17_Chr3g0081941 30.814 344 210 9 60 383 25 360 5.09e-32 130
Msa0823600 MtrunA17_Chr3g0108101 34.673 199 121 5 194 388 3 196 8.68e-32 122
Msa0823600 MtrunA17_Chr2g0314301 27.143 350 220 7 59 383 28 367 8.71e-32 129
Msa0823600 MtrunA17_Chr3g0108791 37.056 197 117 4 194 387 3 195 1.08e-31 126
Msa0823600 MtrunA17_Chr3g0100221 34.821 224 126 6 51 256 27 248 1.86e-31 122
Msa0823600 MtrunA17_Chr2g0313281 32.743 226 138 6 164 383 152 369 4.71e-31 125
Msa0823600 MtrunA17_Chr3g0108211 35.859 198 118 5 194 387 3 195 6.94e-31 124
Msa0823600 MtrunA17_Chr1g0163831 33.469 245 149 6 147 384 135 372 1.24e-30 124
Msa0823600 MtrunA17_Chr1g0172171 35.242 227 132 7 165 384 153 371 2.71e-30 124
Msa0823600 MtrunA17_Chr2g0313541 26.632 383 233 10 28 383 8 369 3.08e-30 125
Msa0823600 MtrunA17_Chr1g0163861 29.600 375 230 12 36 383 5 372 5.68e-30 123
Msa0823600 MtrunA17_Chr7g0223931 35.859 198 118 5 194 387 3 195 7.79e-30 123
Msa0823600 MtrunA17_Chr1g0163791 33.480 227 137 6 165 384 153 372 1.08e-29 123
Msa0823600 MtrunA17_Chr1g0174511 33.480 227 137 6 165 384 153 372 1.19e-29 123
Msa0823600 MtrunA17_Chr1g0171101 30.699 329 177 10 99 385 68 387 2.53e-29 120
Msa0823600 MtrunA17_Chr1g0164091 26.247 381 235 11 34 384 14 378 3.47e-29 121
Msa0823600 MtrunA17_Chr1g0172111 31.599 269 164 8 165 421 153 413 4.10e-29 121
Msa0823600 MtrunA17_Chr2g0313591 32.735 223 136 5 167 383 155 369 5.99e-29 121
Msa0823600 MtrunA17_Chr6g0475721 31.047 277 176 8 130 396 116 387 6.41e-29 120
Msa0823600 MtrunA17_Chr1g0172051 34.222 225 138 6 165 384 153 372 8.14e-29 120
Msa0823600 MtrunA17_Chr1g0172271 33.778 225 139 6 165 384 154 373 1.12e-28 119
Msa0823600 MtrunA17_Chr3g0108061 35.149 202 120 3 194 387 3 201 1.43e-28 119
Msa0823600 MtrunA17_Chr1g0163761 27.704 379 227 12 34 384 14 373 2.77e-28 119
Msa0823600 MtrunA17_Chr1g0164011 33.778 225 139 6 165 384 154 373 3.56e-28 119
Msa0823600 MtrunA17_Chr1g0172141 33.040 227 142 6 165 386 153 374 3.66e-28 119
Msa0823600 MtrunA17_Chr8g0359881 34.426 244 143 7 151 384 136 372 3.88e-28 118
Msa0823600 MtrunA17_Chr1g0163981 34.802 227 138 5 165 386 153 374 5.95e-28 117
Msa0823600 MtrunA17_Chr6g0474571 35.242 227 137 5 165 386 153 374 5.96e-28 118
Msa0823600 MtrunA17_Chr3g0107961 35.714 196 120 3 194 387 3 194 1.05e-27 114
Msa0823600 MtrunA17_Chr1g0163931 28.117 377 228 13 34 384 14 373 1.44e-27 117
Msa0823600 MtrunA17_Chr1g0167981 33.333 225 140 5 165 384 154 373 1.68e-27 117
Msa0823600 MtrunA17_Chr2g0323691 33.778 225 139 6 165 384 153 372 1.85e-27 116
Msa0823600 MtrunA17_Chr1g0146241 30.488 246 155 7 152 388 145 383 6.38e-27 115
Msa0823600 MtrunA17_Chr7g0255111 28.814 354 222 10 60 388 33 381 6.51e-27 115
Msa0823600 MtrunA17_Chr5g0443921 74.242 66 17 0 392 457 25 90 8.55e-27 103
Msa0823600 MtrunA17_Chr1g0170881 33.333 225 140 6 165 384 153 372 8.99e-27 114
Msa0823600 MtrunA17_Chr2g0313521 28.947 342 208 9 69 384 42 374 2.61e-26 112
Msa0823600 MtrunA17_Chr8g0348231 26.596 376 187 10 86 384 49 412 5.25e-26 110
Msa0823600 MtrunA17_Chr7g0255401 30.081 246 156 7 152 388 83 321 7.15e-26 111
Msa0823600 MtrunA17_Chr2g0313431 28.116 345 213 9 66 384 35 370 1.15e-25 110
Msa0823600 MtrunA17_Chr7g0220981 32.883 222 144 4 166 383 35 255 2.68e-25 107
Msa0823600 MtrunA17_Chr2g0313391 27.928 333 205 9 78 384 51 374 3.32e-25 107
Msa0823600 MtrunA17_Chr2g0313311 28.412 359 219 11 52 384 24 370 5.17e-25 109
Msa0823600 MtrunA17_Chr3g0107061 34.706 170 105 3 194 361 3 168 6.64e-25 100
Msa0823600 MtrunA17_Chr2g0313351 27.273 352 221 9 59 384 32 374 1.02e-24 108
Msa0823600 MtrunA17_Chr1g0163891 32.444 225 141 7 165 384 153 371 1.72e-24 107
Msa0823600 MtrunA17_Chr5g0444051 60.714 84 33 0 385 468 183 266 3.49e-24 103
Msa0823600 MtrunA17_Chr5g0444051 46.988 83 41 1 386 465 11 93 2.33e-15 77.4
Msa0823600 MtrunA17_Chr5g0443961 54.737 95 43 0 374 468 156 250 1.26e-23 100
Msa0823600 MtrunA17_Chr8g0348191 25.962 416 228 13 32 384 1 399 7.58e-23 100
Msa0823600 MtrunA17_Chr7g0221061 32.883 222 140 7 169 384 260 478 6.29e-22 99.4
Msa0823600 MtrunA17_Chr7g0221021 31.390 223 145 5 166 383 187 406 1.73e-21 97.8
Msa0823600 MtrunA17_Chr3g0081531 58.228 79 33 0 390 468 7 85 2.31e-21 97.8
Msa0823600 MtrunA17_Chr1g0159111 26.692 266 176 8 126 383 121 375 3.74e-21 97.1
Msa0823600 MtrunA17_Chr4g0048421 29.487 234 153 6 169 394 156 385 4.10e-21 97.1
Msa0823600 MtrunA17_Chr4g0048471 29.279 222 146 6 173 388 35 251 6.43e-21 96.3
Msa0823600 MtrunA17_Chr8g0363871 52.500 80 38 0 389 468 16 95 9.26e-21 89.0
Msa0823600 MtrunA17_Chr1g0163631 28.968 252 150 7 65 295 41 284 1.30e-20 92.0
Msa0823600 MtrunA17_Chr3g0097631 31.373 204 121 7 194 388 3 196 1.52e-20 93.2
Msa0823600 MtrunA17_Chr4g0011671 26.271 354 195 12 78 383 47 382 3.83e-20 93.6
Msa0823600 MtrunA17_Chr7g0221171 32.432 222 141 7 169 384 212 430 4.17e-20 94.0
Msa0823600 MtrunA17_Chr7g0221131 27.129 317 203 9 93 384 141 454 1.00e-19 92.4
Msa0823600 MtrunA17_Chr1g0172541 52.500 80 38 0 389 468 9 88 1.16e-19 92.4
Msa0823600 MtrunA17_Chr6g0482321 51.250 80 39 0 389 468 11 90 2.62e-19 91.7
Msa0823600 MtrunA17_Chr3g0102251 51.250 80 39 0 389 468 18 97 3.57e-19 87.4
Msa0823600 MtrunA17_Chr4g0011621 25.135 370 208 12 60 383 12 358 3.63e-19 90.5
Msa0823600 MtrunA17_Chr6g0482411 50.000 80 40 0 389 468 11 90 3.90e-19 84.7
Msa0823600 MtrunA17_Chr3g0084151 52.439 82 39 0 387 468 14 95 4.03e-19 90.9
Msa0823600 MtrunA17_Chr2g0313321 25.954 262 170 6 59 298 28 287 5.38e-19 87.4
Msa0823600 MtrunA17_Chr3g0102221 50.000 80 40 0 389 468 18 97 6.39e-19 84.0
Msa0823600 MtrunA17_Chr6g0480061 53.731 67 31 0 390 456 20 86 1.27e-18 83.6
Msa0823600 MtrunA17_Chr6g0482141 52.381 84 39 1 389 471 17 100 1.48e-18 89.4
Msa0823600 MtrunA17_Chr1g0153511 51.899 79 38 0 390 468 10 88 1.55e-18 89.4
Msa0823600 MtrunA17_Chr6g0479781 58.209 67 28 0 390 456 16 82 1.99e-18 84.3
Msa0823600 MtrunA17_Chr6g0479651 56.716 67 29 0 390 456 20 86 2.24e-18 88.6
Msa0823600 MtrunA17_Chr6g0482471 53.750 80 37 0 389 468 11 90 2.46e-18 88.2
Msa0823600 MtrunA17_Chr6g0478991 57.576 66 28 0 391 456 8 73 3.02e-18 80.9
Msa0823600 MtrunA17_Chr6g0480271 58.824 68 28 0 389 456 17 84 3.68e-18 87.4
Msa0823600 MtrunA17_Chr6g0479701 50.633 79 39 0 390 468 22 100 3.82e-18 87.8
Msa0823600 MtrunA17_Chr6g0482441 52.500 80 38 0 389 468 9 88 4.56e-18 87.8
Msa0823600 MtrunA17_Chr3g0084731 51.852 81 37 1 378 456 3 83 4.78e-18 87.4
Msa0823600 MtrunA17_Chr6g0482491 50.000 82 41 0 390 471 10 91 5.48e-18 87.4
Msa0823600 MtrunA17_Chr6g0481141 59.701 67 27 0 390 456 69 135 6.06e-18 87.0
Msa0823600 MtrunA17_Chr8g0350801 50.000 80 40 0 389 468 9 88 7.06e-18 87.0
Msa0823600 MtrunA17_Chr6g0480181 58.209 67 28 0 390 456 11 77 7.98e-18 86.7
Msa0823600 MtrunA17_Chr4g0025701 53.165 79 37 0 390 468 18 96 1.52e-17 85.5
Msa0823600 MtrunA17_Chr6g0478721 26.923 234 159 6 169 394 74 303 1.55e-17 85.9
Msa0823600 MtrunA17_Chr6g0484161 58.824 68 28 0 389 456 17 84 1.71e-17 85.9
Msa0823600 MtrunA17_Chr6g0478771 60.606 66 26 0 391 456 8 73 1.79e-17 85.5
Msa0823600 MtrunA17_Chr6g0479631 58.824 68 28 0 389 456 17 84 1.89e-17 85.5
Msa0823600 MtrunA17_Chr3g0084771 52.439 82 36 2 378 456 1 82 2.02e-17 84.3
Msa0823600 MtrunA17_Chr4g0025811 59.701 67 27 0 390 456 18 84 2.06e-17 85.5
Msa0823600 MtrunA17_Chr6g0478841 59.091 66 27 0 391 456 8 73 2.08e-17 85.5
Msa0823600 MtrunA17_Chr6g0454921 42.553 94 54 0 375 468 107 200 2.20e-17 80.9
Msa0823600 MtrunA17_Chr6g0480521 58.209 67 28 0 390 456 18 84 2.35e-17 85.1
Msa0823600 MtrunA17_Chr8g0354681 50.633 79 39 0 390 468 9 87 2.43e-17 85.1
Msa0823600 MtrunA17_Chr6g0479051 59.091 66 27 0 391 456 8 73 2.76e-17 85.1
Msa0823600 MtrunA17_Chr6g0482351 52.500 80 38 0 389 468 11 90 3.45e-17 85.1
Msa0823600 MtrunA17_Chr6g0480381 50.633 79 39 0 390 468 23 101 3.67e-17 84.0
Msa0823600 MtrunA17_Chr6g0482111 47.778 90 46 1 379 468 5 93 3.76e-17 84.7
Msa0823600 MtrunA17_Chr6g0454961 48.837 86 44 0 383 468 37 122 3.79e-17 84.7
Msa0823600 MtrunA17_Chr8g0371711 51.899 79 38 0 390 468 20 98 4.69e-17 84.3
Msa0823600 MtrunA17_Chr6g0480041 56.716 67 29 0 390 456 18 84 5.50e-17 84.3
Msa0823600 MtrunA17_Chr6g0479591 52.500 80 38 0 389 468 17 96 6.55e-17 84.0
Msa0823600 MtrunA17_Chr6g0478741 56.061 66 29 0 391 456 8 73 7.03e-17 83.6
Msa0823600 MtrunA17_Chr1g0172831 50.649 77 38 0 392 468 20 96 7.23e-17 83.6
Msa0823600 MtrunA17_Chr4g0025751 58.209 67 28 0 390 456 18 84 7.52e-17 83.6
Msa0823600 MtrunA17_Chr3g0102271 48.780 82 42 0 387 468 16 97 1.00e-16 83.6
Msa0823600 MtrunA17_Chr6g0479641 56.716 67 29 0 390 456 18 84 1.03e-16 83.2
Msa0823600 MtrunA17_Chr7g0221071 30.667 225 135 6 179 384 89 311 1.12e-16 82.8
Msa0823600 MtrunA17_Chr4g0025741 58.209 67 28 0 390 456 18 84 1.15e-16 83.2
Msa0823600 MtrunA17_Chr3g0077971 50.000 80 40 0 389 468 9 88 1.18e-16 83.2
Msa0823600 MtrunA17_Chr8g0354721 48.052 77 40 0 390 466 9 85 1.23e-16 83.2
Msa0823600 MtrunA17_Chr6g0481001 56.716 67 29 0 390 456 20 86 1.25e-16 83.2
Msa0823600 MtrunA17_Chr3g0084841 51.852 81 36 2 379 456 5 85 1.43e-16 82.8
Msa0823600 MtrunA17_Chr6g0480451 55.224 67 30 0 390 456 82 148 1.51e-16 82.8
Msa0823600 MtrunA17_Chr3g0084851 51.852 81 36 2 379 456 5 85 1.56e-16 82.8
Msa0823600 MtrunA17_Chr4g0025831 58.209 67 28 0 390 456 18 84 1.57e-16 82.8
Msa0823600 MtrunA17_Chr2g0298301 44.444 90 50 0 379 468 11 100 1.75e-16 76.3
Msa0823600 MtrunA17_Chr1g0172811 50.000 78 39 0 391 468 19 96 1.75e-16 82.8
Msa0823600 MtrunA17_Chr2g0299841 52.239 67 32 0 390 456 55 121 1.83e-16 82.4
Msa0823600 MtrunA17_Chr3g0102121 50.000 80 40 0 389 468 18 97 2.09e-16 82.4
Msa0823600 MtrunA17_Chr8g0362601 50.649 77 37 1 392 468 21 96 2.82e-16 79.7
Msa0823600 MtrunA17_Chr3g0084721 50.602 83 38 2 377 456 3 85 2.85e-16 82.0
Msa0823600 MtrunA17_Chr6g0479731 58.824 68 28 0 389 456 17 84 2.99e-16 81.6
Msa0823600 MtrunA17_Chr6g0479731 30.180 222 145 7 165 381 197 413 2.29e-12 69.3
Msa0823600 MtrunA17_Chr6g0454951 49.367 79 40 0 390 468 82 160 3.06e-16 82.0
Msa0823600 MtrunA17_Chr8g0362611 50.649 77 37 1 392 468 21 96 3.28e-16 79.3
Msa0823600 MtrunA17_Chr3g0102131 50.000 80 40 0 389 468 18 97 3.32e-16 81.6
Msa0823600 MtrunA17_Chr3g0102261 50.000 80 40 0 389 468 18 97 3.76e-16 81.6
Msa0823600 MtrunA17_Chr6g0479621 55.224 67 30 0 390 456 20 86 3.96e-16 81.6
Msa0823600 MtrunA17_Chr3g0102281 51.250 80 39 0 389 468 18 97 3.98e-16 81.6
Msa0823600 MtrunA17_Chr4g0005871 47.619 84 44 0 385 468 128 211 3.99e-16 81.6
Msa0823600 MtrunA17_Chr6g0454821 53.247 77 36 0 392 468 43 119 4.18e-16 81.3
Msa0823600 MtrunA17_Chr6g0455031 58.462 65 27 0 392 456 32 96 4.56e-16 81.3
Msa0823600 MtrunA17_Chr2g0300251 52.239 67 32 0 390 456 18 84 5.12e-16 81.3
Msa0823600 MtrunA17_Chr8g0354701 55.224 67 30 0 390 456 9 75 5.24e-16 81.3
Msa0823600 MtrunA17_Chr3g0102171 51.250 80 39 0 389 468 18 97 5.49e-16 80.9
Msa0823600 MtrunA17_Chr6g0455211 53.247 77 36 0 392 468 41 117 5.82e-16 80.9
Msa0823600 MtrunA17_Chr6g0454971 42.105 114 55 1 366 468 14 127 6.12e-16 80.9
Msa0823600 MtrunA17_Chr7g0221091 33.553 152 98 2 169 318 186 336 7.53e-16 79.0
Msa0823600 MtrunA17_Chr6g0479821 53.731 67 31 0 390 456 19 85 8.16e-16 80.5
Msa0823600 MtrunA17_Chr6g0451551 53.731 67 31 0 390 456 19 85 1.01e-15 80.1
Msa0823600 MtrunA17_Chr4g0006771 55.224 67 30 0 390 456 19 85 1.26e-15 79.7
Msa0823600 MtrunA17_Chr6g0455191 53.247 77 36 0 392 468 319 395 1.34e-15 80.1
Msa0823600 MtrunA17_Chr3g0105991 33.588 131 86 1 151 281 119 248 1.41e-15 76.6
Msa0823600 MtrunA17_Chr6g0479671 57.353 68 29 0 389 456 15 82 1.46e-15 79.7
Msa0823600 MtrunA17_Chr6g0480911 56.716 67 29 0 390 456 18 84 2.30e-15 79.0
Msa0823600 MtrunA17_Chr5g0415581 42.353 85 48 1 387 471 17 100 2.35e-15 75.5
Msa0823600 MtrunA17_Chr6g0481221 55.224 67 30 0 390 456 18 84 2.40e-15 78.6
Msa0823600 MtrunA17_Chr6g0455221 51.948 77 37 0 392 468 13 89 2.67e-15 79.0
Msa0823600 MtrunA17_Chr8g0354711 52.239 67 32 0 390 456 9 75 2.86e-15 79.0
Msa0823600 MtrunA17_Chr2g0298531 50.633 79 39 0 390 468 22 100 4.15e-15 78.2
Msa0823600 MtrunA17_Chr6g0480951 55.224 67 30 0 390 456 20 86 5.62e-15 75.9
Msa0823600 MtrunA17_Chr6g0478451 50.746 67 33 0 390 456 20 86 6.68e-15 77.8
Msa0823600 MtrunA17_Chr8g0338251 28.079 203 139 4 180 376 172 373 6.94e-15 77.4
Msa0823600 MtrunA17_Chr6g0481011 53.846 65 30 0 392 456 25 89 7.36e-15 77.4
Msa0823600 MtrunA17_Chr6g0480091 54.412 68 31 0 389 456 17 84 8.29e-15 76.3
Msa0823600 MtrunA17_Chr5g0415571 46.429 84 44 1 385 468 10 92 8.45e-15 73.2
Msa0823600 MtrunA17_Chr7g0242771 44.156 77 43 0 380 456 6 82 8.62e-15 72.4
Msa0823600 MtrunA17_Chr7g0255411 35.484 124 71 3 264 385 5 121 9.34e-15 75.9
Msa0823600 MtrunA17_Chr1g0146421 55.224 67 30 0 390 456 18 84 9.70e-15 77.0
Msa0823600 MtrunA17_Chr6g0454851 49.367 79 39 1 390 468 89 166 1.07e-14 77.0
Msa0823600 MtrunA17_Chr4g0005851 51.471 68 33 0 389 456 36 103 1.13e-14 77.0
Msa0823600 MtrunA17_Chr2g0299921 45.333 75 41 0 382 456 7 81 1.19e-14 77.0
Msa0823600 MtrunA17_Chr5g0415611 42.169 83 47 1 389 471 19 100 1.25e-14 73.9
Msa0823600 MtrunA17_Chr8g0363491 46.154 78 41 1 391 468 17 93 1.84e-14 73.2
Msa0823600 MtrunA17_Chr6g0482511 52.239 67 32 0 390 456 33 99 1.88e-14 76.3
Msa0823600 MtrunA17_Chr5g0415631 45.000 80 43 1 389 468 19 97 1.97e-14 73.2
Msa0823600 MtrunA17_Chr7g0243021 50.000 68 34 0 389 456 12 79 1.97e-14 74.7
Msa0823600 MtrunA17_Chr6g0455131 48.718 78 40 0 391 468 88 165 2.03e-14 76.3
Msa0823600 MtrunA17_Chr8g0362831 46.154 78 41 1 391 468 17 93 2.06e-14 73.2
Msa0823600 MtrunA17_Chr6g0455251 55.385 65 29 0 392 456 28 92 2.34e-14 75.9
Msa0823600 MtrunA17_Chr5g0414681 44.444 72 38 1 386 455 6 77 2.50e-14 71.2
Msa0823600 MtrunA17_Chr6g0479001 53.030 66 31 0 391 456 8 73 3.24e-14 75.5
Msa0823600 MtrunA17_Chr2g0299881 46.479 71 38 0 386 456 14 84 3.42e-14 75.5
Msa0823600 MtrunA17_Chr6g0455551 48.052 77 40 0 392 468 49 125 3.72e-14 75.5
Msa0823600 MtrunA17_Chr2g0299791 46.479 71 38 0 386 456 10 80 3.87e-14 75.5
Msa0823600 MtrunA17_Chr7g0242811 50.000 68 34 0 389 456 42 109 4.28e-14 75.1
Msa0823600 MtrunA17_Chr5g0442761 45.570 79 43 0 390 468 15 93 4.52e-14 75.1
Msa0823600 MtrunA17_Chr2g0298291 48.101 79 41 0 390 468 22 100 4.81e-14 75.1
Msa0823600 MtrunA17_Chr6g0454931 45.122 82 45 0 387 468 47 128 5.08e-14 74.7
Msa0823600 MtrunA17_Chr6g0480461 52.941 68 32 0 389 456 17 84 5.84e-14 74.7
Msa0823600 MtrunA17_Chr4g0005891 46.341 82 44 0 389 470 26 107 5.84e-14 74.7
Msa0823600 MtrunA17_Chr7g0221141 30.151 199 130 4 194 384 3 200 7.53e-14 73.9
Msa0823600 MtrunA17_Chr8g0362921 44.872 78 42 1 391 468 18 94 8.86e-14 71.2
Msa0823600 MtrunA17_Chr5g0394051 50.000 68 34 0 389 456 24 91 8.97e-14 72.8
Msa0823600 MtrunA17_Chr4g0009141 52.239 67 32 0 390 456 526 592 1.10e-13 73.9
Msa0823600 MtrunA17_Chr4g0009171 45.679 81 43 1 377 456 718 798 1.16e-13 73.9
Msa0823600 MtrunA17_Chr5g0420331 47.761 67 35 0 390 456 12 78 1.24e-13 73.6
Msa0823600 MtrunA17_Chr2g0313401 34.307 137 76 6 241 371 1 129 1.45e-13 68.2
Msa0823600 MtrunA17_Chr2g0299851 46.269 67 36 0 390 456 14 80 1.47e-13 73.6
Msa0823600 MtrunA17_Chr7g0255681 50.746 67 33 0 390 456 1016 1082 1.48e-13 73.6
Msa0823600 MtrunA17_Chr7g0255681 49.254 67 34 0 390 456 514 580 2.53e-12 69.7
Msa0823600 MtrunA17_Chr3g0100231 50.617 81 37 1 306 386 1 78 1.79e-13 72.8
Msa0823600 MtrunA17_Chr6g0454831 50.000 74 37 0 383 456 2 75 1.95e-13 73.2
Msa0823600 MtrunA17_Chr4g0041931 46.053 76 41 0 390 465 23 98 2.25e-13 72.8
Msa0823600 MtrunA17_Chr8g0342621 40.964 83 48 1 386 468 4 85 2.33e-13 72.8
Msa0823600 MtrunA17_Chr8g0352861 25.839 298 186 9 104 382 122 403 2.54e-13 72.8
Msa0823600 MtrunA17_Chr4g0020591 46.250 80 42 1 389 468 16 94 2.69e-13 72.4
Msa0823600 MtrunA17_Chr5g0415641 45.000 80 43 1 389 468 13 91 2.70e-13 69.7
Msa0823600 MtrunA17_Chr5g0430531 43.939 66 37 0 390 455 7 72 3.22e-13 71.2
Msa0823600 MtrunA17_Chr3g0119591 45.455 88 48 0 381 468 3 90 3.43e-13 71.2
Msa0823600 MtrunA17_Chr4g0010711 41.772 79 46 0 390 468 519 597 3.48e-13 72.4
Msa0823600 MtrunA17_Chr4g0041441 45.714 70 38 0 387 456 2 71 4.48e-13 72.0
Msa0823600 MtrunA17_Chr4g0041611 44.565 92 49 1 379 468 7 98 4.64e-13 71.6
Msa0823600 MtrunA17_Chr2g0319821 45.000 80 44 0 377 456 31 110 4.78e-13 71.6
Msa0823600 MtrunA17_Chr8g0353361 46.250 80 43 0 389 468 14 93 5.47e-13 70.9
Msa0823600 MtrunA17_Chr8g0353351 51.471 68 33 0 389 456 14 81 5.77e-13 70.9
Msa0823600 MtrunA17_Chr4g0009401 50.746 67 33 0 390 456 505 571 6.16e-13 71.6
Msa0823600 MtrunA17_Chr4g0009301 49.254 67 34 0 390 456 546 612 6.42e-13 71.6
Msa0823600 MtrunA17_Chr7g0223531 40.000 80 48 0 389 468 9 88 6.78e-13 71.2
Msa0823600 MtrunA17_Chr8g0342741 39.759 83 49 1 383 465 1 82 7.03e-13 70.5
Msa0823600 MtrunA17_Chr5g0420341 43.038 79 45 0 390 468 12 90 8.54e-13 70.9
Msa0823600 MtrunA17_Chr4g0018431 47.561 82 42 1 387 468 18 98 9.73e-13 70.9
Msa0823600 MtrunA17_Chr6g0474761 38.889 90 55 0 379 468 6 95 9.98e-13 70.5
Msa0823600 MtrunA17_Chr8g0348541 48.193 83 41 1 388 468 20 102 1.11e-12 70.5
Msa0823600 MtrunA17_Chr7g0256881 50.000 68 34 0 389 456 11 78 1.12e-12 70.9
Msa0823600 MtrunA17_Chr8g0368251 50.746 67 33 0 390 456 18 84 1.25e-12 70.5
Msa0823600 MtrunA17_Chr8g0353371 50.746 67 32 1 390 456 11 76 1.37e-12 70.5
Msa0823600 MtrunA17_Chr7g0242751 48.529 68 35 0 389 456 45 112 1.38e-12 70.1
Msa0823600 MtrunA17_Chr8g0339011 43.750 64 36 0 392 455 16 79 1.43e-12 70.1
Msa0823600 MtrunA17_Chr4g0009041 49.254 67 34 0 390 456 514 580 1.61e-12 70.1
Msa0823600 MtrunA17_Chr3g0119601 50.000 76 38 0 381 456 3 78 1.71e-12 70.1
Msa0823600 MtrunA17_Chr6g0486311 41.772 79 46 0 390 468 20 98 1.77e-12 70.1
Msa0823600 MtrunA17_Chr4g0009101 49.254 67 34 0 390 456 544 610 1.93e-12 70.1
Msa0823600 MtrunA17_Chr8g0338981 35.632 87 44 1 369 455 7 81 1.97e-12 69.7
Msa0823600 MtrunA17_Chr2g0319851 47.059 68 36 0 389 456 54 121 2.33e-12 69.7
Msa0823600 MtrunA17_Chr8g0338881 48.485 66 34 0 390 455 36 101 2.41e-12 69.7
Msa0823600 MtrunA17_Chr7g0221111 29.798 198 116 7 204 384 8 199 2.56e-12 69.3
Msa0823600 MtrunA17_Chr8g0342791 43.023 86 48 1 383 468 1 85 2.98e-12 69.3
Msa0823600 MtrunA17_Chr8g0338901 44.776 67 37 0 390 456 36 102 3.00e-12 69.3
Msa0823600 MtrunA17_Chr6g0486361 43.038 79 45 0 390 468 20 98 3.15e-12 69.3
Msa0823600 MtrunA17_Chr6g0474801 37.931 87 54 0 382 468 9 95 3.20e-12 68.9
Msa0823600 MtrunA17_Chr3g0104861 41.379 87 50 1 382 468 9 94 3.83e-12 68.6
Msa0823600 MtrunA17_Chr3g0119001 45.000 80 43 1 389 468 22 100 3.86e-12 68.9
Msa0823600 MtrunA17_Chr3g0085731 45.455 66 36 0 390 455 20 85 4.09e-12 68.9
Msa0823600 MtrunA17_Chr8g0382341 49.315 73 36 1 384 456 34 105 4.43e-12 67.4
Msa0823600 MtrunA17_Chr7g0242801 48.529 68 35 0 389 456 87 154 5.17e-12 68.6
Msa0823600 MtrunA17_Chr8g0353401 42.683 82 47 0 389 470 11 92 5.70e-12 67.8
Msa0823600 MtrunA17_Chr6g0486221 41.772 79 46 0 390 468 20 98 5.77e-12 68.6
Msa0823600 MtrunA17_Chr6g0486451 40.506 79 47 0 390 468 20 98 6.02e-12 66.6
Msa0823600 MtrunA17_Chr2g0296471 40.625 64 38 0 392 455 16 79 6.93e-12 65.1
Msa0823600 MtrunA17_Chr8g0342671 42.466 73 41 1 383 455 2 73 7.69e-12 67.8
Msa0823600 MtrunA17_Chr6g0486521 41.772 79 46 0 390 468 20 98 8.24e-12 67.8
Msa0823600 MtrunA17_Chr8g0342641 39.535 86 51 1 383 468 1 85 1.08e-11 67.4
Msa0823600 MtrunA17_Chr6g0486481 37.500 80 50 0 390 469 20 99 1.10e-11 67.4
Msa0823600 MtrunA17_Chr8g0342691 38.554 83 50 1 383 465 1 82 1.12e-11 67.4
Msa0823600 MtrunA17_Chr8g0342221 40.244 82 48 1 387 468 17 97 1.15e-11 67.0
Msa0823600 MtrunA17_Chr6g0482161 40.260 77 46 0 390 466 13 89 1.30e-11 66.6
Msa0823600 MtrunA17_Chr4g0009241 44.776 67 37 0 390 456 548 614 1.43e-11 67.4
Msa0823600 MtrunA17_Chr4g0005351 37.383 107 63 2 362 468 66 168 1.43e-11 66.2
Msa0823600 MtrunA17_Chr8g0338261 26.601 203 142 4 180 376 186 387 1.46e-11 67.0
Msa0823600 MtrunA17_Chr6g0486271 41.772 79 46 0 390 468 20 98 1.53e-11 66.6
Msa0823600 MtrunA17_Chr8g0342781 36.047 86 54 1 383 468 1 85 1.58e-11 66.6
Msa0823600 MtrunA17_Chr8g0352221 43.038 79 44 1 390 468 14 91 1.67e-11 67.0
Msa0823600 MtrunA17_Chr3g0089911 26.484 219 141 7 180 382 183 397 1.85e-11 66.6
Msa0823600 MtrunA17_Chr3g0085541 42.424 66 38 0 390 455 19 84 2.04e-11 66.2
Msa0823600 MtrunA17_Chr5g0439951 41.573 89 51 1 380 468 7 94 2.12e-11 66.6
Msa0823600 MtrunA17_Chr7g0248121 48.571 70 36 0 387 456 17 86 2.16e-11 66.6
Msa0823600 MtrunA17_Chr7g0248521 47.143 70 37 0 387 456 17 86 2.25e-11 66.6
Msa0823600 MtrunA17_Chr6g0481331 37.931 87 54 0 382 468 50 136 2.31e-11 66.6
Msa0823600 MtrunA17_Chr4g0010521 50.769 65 31 1 392 456 12 75 2.39e-11 66.6
Msa0823600 MtrunA17_Chr8g0370511 46.269 67 36 0 390 456 11 77 2.52e-11 66.2
Msa0823600 MtrunA17_Chr6g0486301 41.772 79 46 0 390 468 20 98 2.57e-11 66.2
Msa0823600 MtrunA17_Chr8g0339031 46.875 64 34 0 392 455 18 81 3.13e-11 65.9
Msa0823600 MtrunA17_Chr4g0042011 41.975 81 47 0 388 468 22 102 3.17e-11 65.9
Msa0823600 MtrunA17_Chr6g0480311 51.667 60 29 0 397 456 12 71 3.36e-11 65.9
Msa0823600 MtrunA17_Chr7g0248511 47.143 70 37 0 387 456 23 92 3.63e-11 65.9
Msa0823600 MtrunA17_Chr8g0342201 42.647 68 38 1 389 456 50 116 4.25e-11 65.5
Msa0823600 MtrunA17_Chr5g0410001 27.670 206 130 6 186 376 185 386 4.28e-11 65.5
Msa0823600 MtrunA17_Chr2g0319911 42.308 78 45 0 379 456 36 113 4.96e-11 62.0
Msa0823600 MtrunA17_Chr8g0351551 39.024 82 49 1 387 468 16 96 5.66e-11 65.1
Msa0823600 MtrunA17_Chr4g0041951 46.269 67 36 0 390 456 78 144 6.24e-11 65.1
Msa0823600 MtrunA17_Chr4g0010651 49.231 65 32 1 392 456 13 76 7.55e-11 64.7
Msa0823600 MtrunA17_Chr4g0005261 40.741 81 47 1 388 468 9 88 8.79e-11 64.7
Msa0823600 MtrunA17_Chr3g0092261 26.027 219 142 7 180 382 228 442 9.56e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0823600 AT1G52660.2 27.954 347 218 10 66 386 26 366 3.91e-25 107
Msa0823600 AT1G52660.1 27.954 347 218 10 66 386 26 366 5.25e-25 106
Msa0823600 AT1G61310.1 29.740 269 173 9 131 390 122 383 6.32e-24 105
Msa0823600 AT1G61190.2 29.740 269 173 9 131 390 121 382 4.60e-23 103
Msa0823600 AT1G61190.3 29.740 269 173 9 131 390 121 382 4.60e-23 103
Msa0823600 AT1G61190.4 29.740 269 173 9 131 390 121 382 4.68e-23 103
Msa0823600 AT1G61180.1 29.963 267 175 8 131 390 120 381 5.54e-23 103
Msa0823600 AT1G61180.2 29.963 267 175 8 131 390 120 381 7.85e-23 102
Msa0823600 AT1G61190.1 29.740 269 173 9 131 390 121 382 9.20e-23 102
Msa0823600 AT4G10780.1 25.364 343 224 8 74 390 46 382 1.55e-22 101
Msa0823600 AT4G10780.2 25.364 343 224 8 74 390 46 382 1.58e-22 101
Msa0823600 AT4G27220.2 32.547 212 129 7 183 386 141 346 3.53e-22 100
Msa0823600 AT4G27220.1 32.547 212 129 7 183 386 133 338 4.10e-22 100
Msa0823600 AT3G15700.1 31.222 221 138 7 182 393 158 373 8.48e-22 97.4
Msa0823600 AT1G61300.1 31.507 219 139 7 179 390 56 270 8.74e-22 99.4
Msa0823600 AT3G15700.2 32.243 214 131 7 182 386 158 366 9.17e-22 97.1
Msa0823600 AT1G61300.2 31.507 219 139 7 179 390 56 270 9.39e-22 99.0
Msa0823600 AT4G27190.1 31.048 248 158 8 148 388 129 370 1.16e-20 95.9
Msa0823600 AT5G43740.1 26.557 305 187 9 169 440 156 456 1.76e-20 95.5
Msa0823600 AT5G43740.2 26.557 305 187 9 169 440 156 456 1.76e-20 95.5
Msa0823600 AT1G12280.2 25.926 324 208 12 131 440 85 390 2.21e-20 95.1
Msa0823600 AT1G12210.3 26.159 302 196 10 131 413 81 374 3.08e-20 94.7
Msa0823600 AT1G12210.2 26.159 302 196 10 131 413 81 374 3.08e-20 94.7
Msa0823600 AT1G12210.1 26.159 302 196 10 131 413 123 416 3.62e-20 94.4
Msa0823600 AT1G12280.1 26.394 269 183 8 131 390 123 385 1.63e-19 92.4
Msa0823600 AT1G12220.3 28.625 269 169 9 131 386 2 260 2.43e-19 91.7
Msa0823600 AT5G47260.1 28.947 228 152 7 167 390 152 373 2.45e-19 92.0
Msa0823600 AT5G43730.4 29.577 213 140 6 177 383 165 373 2.96e-19 91.7
Msa0823600 AT5G43730.1 29.577 213 140 6 177 383 165 373 2.96e-19 91.7
Msa0823600 AT5G43730.3 29.577 213 140 6 177 383 165 373 2.96e-19 91.7
Msa0823600 AT5G43730.2 29.577 213 140 6 177 383 165 373 2.96e-19 91.7
Msa0823600 AT5G43730.5 29.577 213 140 6 177 383 165 373 2.96e-19 91.7
Msa0823600 AT1G12220.1 28.625 269 169 9 131 386 123 381 3.30e-19 91.3
Msa0823600 AT1G12220.2 28.625 269 169 9 131 386 123 381 3.30e-19 91.3
Msa0823600 AT5G63020.1 28.821 229 148 7 173 390 159 383 5.06e-19 90.9
Msa0823600 AT5G05400.1 25.000 384 246 14 73 424 45 418 1.40e-17 86.3
Msa0823600 AT1G63350.4 25.385 260 168 8 173 413 161 413 1.92e-17 85.9
Msa0823600 AT1G63350.3 25.385 260 168 8 173 413 161 413 2.16e-17 85.9
Msa0823600 AT1G63350.2 25.385 260 168 8 173 413 161 413 2.16e-17 85.9
Msa0823600 AT5G05400.2 27.236 246 168 7 186 424 8 249 2.30e-17 85.5
Msa0823600 AT5G05400.3 27.236 246 168 7 186 424 8 249 2.30e-17 85.5
Msa0823600 AT1G63350.1 25.385 260 168 8 173 413 161 413 2.50e-17 85.5
Msa0823600 AT1G12290.4 28.571 210 139 6 179 381 128 333 4.61e-17 84.7
Msa0823600 AT1G12290.3 28.571 210 139 6 179 381 128 333 4.61e-17 84.7
Msa0823600 AT1G12290.2 28.571 210 139 6 179 381 128 333 4.61e-17 84.7
Msa0823600 AT1G12290.1 28.571 210 139 6 179 381 170 375 5.21e-17 84.7
Msa0823600 AT5G47250.1 25.000 220 155 5 169 383 161 375 1.50e-16 83.2
Msa0823600 AT1G15890.1 25.856 263 184 7 130 386 121 378 3.58e-15 79.0
Msa0823600 AT1G72930.1 41.975 81 47 0 385 465 4 84 3.90e-15 73.9
Msa0823600 AT1G72930.2 41.975 81 47 0 385 465 4 84 4.00e-15 73.2
Msa0823600 AT1G15890.2 27.442 215 146 6 178 386 8 218 6.87e-15 77.8
Msa0823600 AT1G51480.1 26.250 240 164 7 150 383 142 374 7.65e-15 77.8
Msa0823600 AT1G17615.1 42.169 83 48 0 389 471 14 96 1.56e-13 72.4
Msa0823600 AT1G72950.1 40.476 84 50 0 385 468 6 89 2.29e-13 72.0
Msa0823600 AT1G72920.1 40.964 83 49 0 386 468 5 87 4.37e-13 70.1
Msa0823600 AT5G36930.4 47.761 67 35 0 390 456 14 80 1.33e-12 70.9
Msa0823600 AT5G36930.1 47.761 67 35 0 390 456 14 80 1.33e-12 70.9
Msa0823600 AT5G36930.2 47.761 67 35 0 390 456 17 83 1.36e-12 70.9
Msa0823600 AT5G36930.3 47.761 67 35 0 390 456 14 80 1.42e-12 70.9
Msa0823600 AT5G40100.1 53.030 66 31 0 390 455 12 77 1.76e-12 70.5
Msa0823600 AT1G72900.1 40.244 82 49 0 390 471 10 91 3.14e-12 68.2
Msa0823600 AT1G72940.1 39.759 83 50 0 386 468 5 87 4.54e-12 67.8
Msa0823600 AT4G26090.1 26.442 208 144 6 173 375 163 366 5.07e-12 68.9
Msa0823600 AT4G09430.1 42.500 80 46 0 389 468 14 93 7.10e-12 68.2
Msa0823600 AT1G72910.1 40.741 81 48 0 385 465 4 84 8.22e-12 67.0
Msa0823600 AT5G48770.1 48.529 68 35 0 388 455 12 79 9.34e-12 68.2
Msa0823600 AT1G72890.1 42.857 77 44 0 389 465 38 114 9.40e-12 67.4
Msa0823600 AT1G17600.1 47.143 70 37 0 387 456 9 78 1.06e-11 67.8
Msa0823600 AT1G27180.1 49.275 69 34 1 389 456 175 243 1.17e-11 67.8
Msa0823600 AT1G27180.5 49.275 69 34 1 389 456 11 79 1.19e-11 67.8
Msa0823600 AT1G27180.8 49.275 69 34 1 389 456 11 79 1.19e-11 67.8
Msa0823600 AT1G72890.2 42.857 77 44 0 389 465 38 114 1.57e-11 66.6
Msa0823600 AT1G72840.1 44.578 83 42 1 383 465 12 90 5.12e-11 65.9
Msa0823600 AT1G72840.2 44.578 83 42 1 383 465 12 90 5.13e-11 65.9
Msa0823600 AT1G72840.3 44.578 83 42 1 383 465 12 90 5.13e-11 65.9
Msa0823600 AT5G17680.2 40.000 80 48 0 389 468 17 96 8.16e-11 65.1
Msa0823600 AT5G17680.1 40.000 80 48 0 389 468 17 96 8.31e-11 65.1
Msa0823600 AT1G72860.1 47.059 68 36 0 389 456 11 78 9.38e-11 65.1
Msa0823600 AT1G72860.3 47.059 68 36 0 389 456 11 78 9.64e-11 65.1

Find 110 sgRNAs with CRISPR-Local

Find 198 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGCATAGTTCTGATATTC+AGG 0.198081 5_3:+62284586 None:intergenic
CCCGGTTGTATAAGCCTTTC+CGG 0.208220 5_3:+62283674 None:intergenic
CTTGGAATTGGAGTTGAAAA+TGG 0.221762 5_3:+62284825 None:intergenic
GGCTAGACATGAAAATAATT+TGG 0.228479 5_3:-62283756 Msa0823600:three_prime_UTR
CTCAATTGGTTTACCTCTTA+AGG 0.244254 5_3:+62284161 None:intergenic
TGAAGAACTTGTCAAGATTA+TGG 0.265353 5_3:-62283876 Msa0823600:CDS
CAAGGAATGCCTACATCTTC+TGG 0.268756 5_3:+62284426 None:intergenic
CTGTCAATTTATTTGTCTAT+TGG 0.297514 5_3:-62282987 Msa0823600:three_prime_UTR
CCCACTTCTTTAATTGTTCT+CGG 0.311343 5_3:+62284189 None:intergenic
AACGACAATGGAATGAATTT+AGG 0.311377 5_3:-62284896 Msa0823600:CDS
TTAGAAGAGTGGGTGAAATT+TGG 0.323432 5_3:+62283968 None:intergenic
AATTGAAGAATCAATTAGTT+TGG 0.337791 5_3:-62283844 Msa0823600:three_prime_UTR
GATACTTTCCATTCCTCAAT+TGG 0.345995 5_3:+62284147 None:intergenic
GTGAGGGTAAAGAAGGAAAA+AGG 0.349740 5_3:-62286419 Msa0823600:intron
GGATTCACTTTGTAAAAGAT+TGG 0.351434 5_3:+62283821 None:intergenic
ACTTAGGAAAATTTGCCATT+TGG 0.354814 5_3:+62284098 None:intergenic
CTCATATGCCTTATGTCTGA+TGG 0.378100 5_3:+62283800 None:intergenic
TCCGGAAAGGCTTATACAAC+CGG 0.380009 5_3:-62283675 Msa0823600:three_prime_UTR
AGTTTAGAGCACTTCTCGTC+TGG 0.380104 5_3:-62284804 Msa0823600:CDS
GATGATAATTGCTCTATGAT+TGG 0.380367 5_3:-62284720 Msa0823600:CDS
ACTCAGAGAGAGTGCAGAAA+TGG 0.384212 5_3:-62283728 Msa0823600:three_prime_UTR
AATTACCTGTATCTAATTTG+TGG 0.394225 5_3:-62283029 Msa0823600:three_prime_UTR
CCTTATCTACAGAGGAATCT+TGG 0.396813 5_3:-62284314 Msa0823600:CDS
TATCTTCTCCTCTAAAACTT+AGG 0.404753 5_3:+62284082 None:intergenic
TTCAATTGCATTTAGAAGAG+TGG 0.406610 5_3:+62283957 None:intergenic
CCAAGATTCCTCTGTAGATA+AGG 0.411477 5_3:+62284314 None:intergenic
TTTCACATTTCAAGAAATAG+AGG 0.414281 5_3:+62283063 None:intergenic
GCATCAATTCACAATCTTGT+TGG 0.414750 5_3:+62284364 None:intergenic
TGCTCTATGATTGGATTGTA+TGG 0.418165 5_3:-62284711 Msa0823600:CDS
CATCAATTCACAATCTTGTT+GGG 0.424042 5_3:+62284365 None:intergenic
GACCAAGTTGAATATCCCTT+TGG 0.425180 5_3:+62284337 None:intergenic
CTTAAGAGGTAAACCAATTG+AGG 0.431520 5_3:-62284160 Msa0823600:CDS
TTTGAAGTGTCGAATTTGTC+CGG 0.433037 5_3:-62283693 Msa0823600:three_prime_UTR
AATGGGTGGGCAAGAGGAAC+TGG 0.434714 5_3:-62286480 Msa0823600:CDS
CGACCTTTCTCTATTATGAA+TGG 0.436902 5_3:-62283126 Msa0823600:three_prime_UTR
TGTTGGTAAGGCGGTAAAGA+TGG 0.437511 5_3:-62285147 Msa0823600:CDS
CATTCTGGTATTCATGATGA+AGG 0.443540 5_3:-62284276 Msa0823600:CDS
AAGTGCTCTAAACTTGGAAT+TGG 0.447088 5_3:+62284813 None:intergenic
ACCAAGTTGAATATCCCTTT+GGG 0.447215 5_3:+62284338 None:intergenic
GTTGGGAACGTGCGGTCAAA+AGG 0.450669 5_3:+62284382 None:intergenic
GGTGAAGGTGAGGGTAAAGA+AGG 0.453947 5_3:-62286426 Msa0823600:CDS
CAAGATTCCTCTGTAGATAA+GGG 0.454632 5_3:+62284315 None:intergenic
CTTTATCACGCTTTATGTCA+AGG 0.465059 5_3:-62284036 Msa0823600:CDS
GACGAGAAGTGCTCTAAACT+TGG 0.465364 5_3:+62284807 None:intergenic
GAAAGAAATATCTATCTGAT+TGG 0.468055 5_3:-62285106 Msa0823600:CDS
GGCGGTAAAGATGGTGTTAG+AGG 0.474312 5_3:-62285138 Msa0823600:CDS
TTCGATAGAAACAGTGAAGC+TGG 0.475619 5_3:-62284534 Msa0823600:CDS
CTGCTCCACAAATTAGATAC+AGG 0.477503 5_3:+62283024 None:intergenic
CGAATTTATTCAAAAGATTG+TGG 0.480994 5_3:-62283271 Msa0823600:three_prime_UTR
TAAATGCAATTGAAGAATCA+AGG 0.482862 5_3:-62283948 Msa0823600:CDS
AAAAGAGAGAGGTGAAGGTG+AGG 0.489616 5_3:-62286436 Msa0823600:CDS
TTCAAGACCTTCATGGATGA+TGG 0.489845 5_3:-62284009 Msa0823600:CDS
GAAGTGGGATCTTCCTTAAG+AGG 0.491860 5_3:-62284174 Msa0823600:CDS
AAATATCTATCTGATTGGTT+CGG 0.494431 5_3:-62285101 Msa0823600:CDS
AACTGATCACAAAACGGAAA+AGG 0.494713 5_3:-62285000 Msa0823600:CDS
AAGTGAATCCATCAGACATA+AGG 0.495370 5_3:-62283808 Msa0823600:three_prime_UTR
GAGGGAAAAGAGAGAGGTGA+AGG 0.501870 5_3:-62286441 Msa0823600:CDS
ACAGCGTTGGCGAAAGCAAT+GGG 0.507281 5_3:-62284669 Msa0823600:CDS
TTTATCACGCTTTATGTCAA+GGG 0.508213 5_3:-62284035 Msa0823600:CDS
TCAATTGCATTTAGAAGAGT+GGG 0.509316 5_3:+62283958 None:intergenic
AAATACGAAGCACATAGATA+TGG 0.510271 5_3:-62283218 Msa0823600:three_prime_UTR
AGATAGTCTGAGACATTCAA+TGG 0.511778 5_3:-62284121 Msa0823600:CDS
AAAGAGAGAGGTGAAGGTGA+GGG 0.518196 5_3:-62286435 Msa0823600:CDS
TGAGACATTCAATGGCCAAA+TGG 0.522176 5_3:-62284113 Msa0823600:CDS
GAAGTTTCCTTCGAATGTGA+AGG 0.522483 5_3:-62284216 Msa0823600:CDS
TTCATTTGACTTATTGAATG+TGG 0.525836 5_3:-62284244 Msa0823600:CDS
GATTGGATTGTATGGTAGCA+AGG 0.529730 5_3:-62284703 Msa0823600:CDS
GATGATGGAGGACTGCACAC+TGG 0.534430 5_3:-62283994 Msa0823600:CDS
ATGATGGAGGACTGCACACT+GGG 0.534798 5_3:-62283993 Msa0823600:CDS
AGATGTGAGGGAAAAGAGAG+AGG 0.538642 5_3:-62286447 Msa0823600:CDS
ACTCCATTCATAATAGAGAA+AGG 0.539762 5_3:+62283123 None:intergenic
CGGTAACCCTTCACATTCGA+AGG 0.546033 5_3:+62284209 None:intergenic
TTGTATGGTAGCAAGGGCTC+TGG 0.547691 5_3:-62284696 Msa0823600:CDS
ACCGAGAACAATTAAAGAAG+TGG 0.550664 5_3:-62284190 Msa0823600:CDS
TCCCAAAGGGATATTCAACT+TGG 0.550891 5_3:-62284339 Msa0823600:CDS
TGAATTGATGCACTCCCAAA+GGG 0.554574 5_3:-62284352 Msa0823600:CDS
AAGTCGAAACAGAAAAGAGT+AGG 0.555473 5_3:-62285064 Msa0823600:CDS
TTGCATCGATTACTATTACA+AGG 0.555886 5_3:+62284408 None:intergenic
AATTGAAATGGGTGGGCAAG+AGG 0.556754 5_3:-62286486 None:intergenic
AAGTTTCCTTCGAATGTGAA+GGG 0.562012 5_3:-62284215 Msa0823600:CDS
TGAAGCAACTGATCACAAAA+CGG 0.562783 5_3:-62285006 Msa0823600:CDS
ATTGGATTGTATGGTAGCAA+GGG 0.563436 5_3:-62284702 Msa0823600:CDS
AACAGCGTTGGCGAAAGCAA+TGG 0.564228 5_3:-62284670 Msa0823600:CDS
GAAAACTATGGAATTCCTCA+TGG 0.566813 5_3:-62283904 Msa0823600:CDS
GAGGTAAACCAATTGAGGAA+TGG 0.572918 5_3:-62284155 Msa0823600:CDS
CAGTCCTCCATCATCCATGA+AGG 0.585084 5_3:+62284002 None:intergenic
TTATCACGCTTTATGTCAAG+GGG 0.586555 5_3:-62284034 Msa0823600:CDS
CCGAGAACAATTAAAGAAGT+GGG 0.591288 5_3:-62284189 Msa0823600:CDS
AGCAGATATACTCATGCAAG+AGG 0.592816 5_3:-62284946 Msa0823600:CDS
CACATTTCAAGAAATAGAGG+AGG 0.593098 5_3:+62283066 None:intergenic
GAAGACAAATTGAAATGGGT+GGG 0.594251 5_3:-62286493 None:intergenic
GGGCTCTGGTAAAACAGCGT+TGG 0.595065 5_3:-62284682 Msa0823600:CDS
ATTCTGGTATTCATGATGAA+GGG 0.600887 5_3:-62284275 Msa0823600:CDS
AAATTTGATCCAGAAGATGT+AGG 0.600911 5_3:-62284435 Msa0823600:CDS
GGAAGACAAATTGAAATGGG+TGG 0.601369 5_3:-62286494 None:intergenic
TACAATCAAGAAAACGACAA+TGG 0.603794 5_3:-62284908 Msa0823600:CDS
GTGAATTGATGCACTCCCAA+AGG 0.607704 5_3:-62284353 Msa0823600:CDS
AGTGTCGAATTTGTCCGGAA+AGG 0.612419 5_3:-62283688 Msa0823600:three_prime_UTR
ACAATCTTGTTGGGAACGTG+CGG 0.613275 5_3:+62284374 None:intergenic
ATGGTGTTAGAGGACGATGA+AGG 0.621254 5_3:-62285128 Msa0823600:CDS
CCGGAAAGGCTTATACAACC+GGG 0.621929 5_3:-62283674 Msa0823600:intron
CATTCATAATAGAGAAAGGT+CGG 0.626305 5_3:+62283127 None:intergenic
GGAATACCGAACAGATGTGA+GGG 0.628938 5_3:-62286459 Msa0823600:CDS
ACTTGGTCCCTTATCTACAG+AGG 0.634815 5_3:-62284322 Msa0823600:CDS
TGGAATACCGAACAGATGTG+AGG 0.646446 5_3:-62286460 Msa0823600:CDS
AAGACCTTCATGGATGATGG+AGG 0.673003 5_3:-62284006 Msa0823600:CDS
TAAGCGATGCTGTGTTTGAG+TGG 0.676239 5_3:-62284977 Msa0823600:CDS
AAGTTCTTCAAGACACCATG+AGG 0.678079 5_3:+62283889 None:intergenic
TATCACGCTTTATGTCAAGG+GGG 0.731210 5_3:-62284033 Msa0823600:CDS
TGATGGAGGACTGCACACTG+GGG 0.746982 5_3:-62283992 Msa0823600:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATAATAATAATGATGA+TGG + chr5_3:62283700-62283719 None:intergenic 10.0%
!!! ATATTAAAAATTGTTTTGTA+TGG - chr5_3:62286260-62286279 Msa0823600:intron 10.0%
!! AAAATTTAAATGAAAGGAAT+TGG + chr5_3:62283940-62283959 None:intergenic 15.0%
!! ATTAATAGAATATAGTACTT+TGG - chr5_3:62284108-62284127 Msa0823600:CDS 15.0%
!! TTAATAGAATATAGTACTTT+GGG - chr5_3:62284109-62284128 Msa0823600:CDS 15.0%
!!! GTACAAATTTCTAGAATTAT+GGG + chr5_3:62283300-62283319 None:intergenic 20.0%
!!! TGTACAAATTTCTAGAATTA+TGG + chr5_3:62283301-62283320 None:intergenic 20.0%
!! AGAAATTTGTACACATTATA+AGG - chr5_3:62283308-62283327 Msa0823600:intron 20.0%
!! GAAATTTGTACACATTATAA+GGG - chr5_3:62283309-62283328 Msa0823600:intron 20.0%
!! TTCAATTATTAATCTTGCTT+CGG + chr5_3:62283527-62283546 None:intergenic 20.0%
!!! TGTTTCTTTTTTGTAAGTTT+TGG - chr5_3:62283607-62283626 Msa0823600:intron 20.0%
!! ATATATTCTACACAAAAGTT+TGG - chr5_3:62283726-62283745 Msa0823600:three_prime_UTR 20.0%
!! TCATATATATAGACTATAGT+TGG - chr5_3:62283772-62283791 Msa0823600:three_prime_UTR 20.0%
!! GACACAAAAATTTAAATGAA+AGG + chr5_3:62283946-62283965 None:intergenic 20.0%
!!! TTAACTATTGATGTGTTTTT+CGG - chr5_3:62284083-62284102 Msa0823600:CDS 20.0%
!! AATTGAAGAATCAATTAGTT+TGG - chr5_3:62285593-62285612 Msa0823600:intron 20.0%
!!! ATAATATAGTTTCATCGTTT+TGG - chr5_3:62285873-62285892 Msa0823600:intron 20.0%
!!! AATTTCTAGAATTATGGGAT+GGG + chr5_3:62283295-62283314 None:intergenic 25.0%
!!! AAATTTCTAGAATTATGGGA+TGG + chr5_3:62283296-62283315 None:intergenic 25.0%
! GCAAGATTAATAATTGAAGT+AGG - chr5_3:62283529-62283548 Msa0823600:intron 25.0%
! AAAATACTGAGAAGATAGAA+CGG + chr5_3:62283558-62283577 None:intergenic 25.0%
! TATATATAGACTATAGTTGG+AGG - chr5_3:62283775-62283794 Msa0823600:three_prime_UTR 25.0%
! TTAGTCAACAAATAAATGGT+TGG + chr5_3:62283834-62283853 None:intergenic 25.0%
!! AAGGTTAGTCAACAAATAAA+TGG + chr5_3:62283838-62283857 None:intergenic 25.0%
! ACATCAATAGTTAACAAACA+AGG + chr5_3:62284077-62284096 None:intergenic 25.0%
! TATATAGTAGAAGACACAAT+TGG - chr5_3:62284139-62284158 Msa0823600:CDS 25.0%
! GAAAGAAATATCTATCTGAT+TGG - chr5_3:62284331-62284350 Msa0823600:CDS 25.0%
!! AAATATCTATCTGATTGGTT+CGG - chr5_3:62284336-62284355 Msa0823600:CDS 25.0%
!! GTATCTAAAGATTTTTCATG+AGG - chr5_3:62284803-62284822 Msa0823600:CDS 25.0%
! TCATCAAAAATCACTAGAAT+TGG + chr5_3:62284972-62284991 None:intergenic 25.0%
!!! TAGTGATTTTTGATGATGTT+CGG - chr5_3:62284976-62284995 Msa0823600:CDS 25.0%
!! TTCATTTGACTTATTGAATG+TGG - chr5_3:62285193-62285212 Msa0823600:intron 25.0%
!!! CAAATTTTCCTAAGTTTTAG+AGG - chr5_3:62285347-62285366 Msa0823600:intron 25.0%
! TAAATGCAATTGAAGAATCA+AGG - chr5_3:62285489-62285508 Msa0823600:intron 25.0%
!! ATCATTTTGTCTGAAAACTA+TGG - chr5_3:62285521-62285540 Msa0823600:intron 25.0%
!! TTTGAAGTATATTACATACC+CGG + chr5_3:62285784-62285803 None:intergenic 25.0%
! TATTACTAGTCGAGTAAAAT+TGG + chr5_3:62285836-62285855 None:intergenic 25.0%
! CTAAATAAGTTCAAAACTAC+AGG - chr5_3:62286102-62286121 Msa0823600:intron 25.0%
! CGAATTTATTCAAAAGATTG+TGG - chr5_3:62286166-62286185 Msa0823600:intron 25.0%
!! CAAACGACTTTTAATACAAT+TGG + chr5_3:62286198-62286217 None:intergenic 25.0%
!!! AAAATTGTTTTGTATGGCAA+AGG - chr5_3:62286266-62286285 Msa0823600:intron 25.0%
! TTTCACATTTCAAGAAATAG+AGG + chr5_3:62286377-62286396 None:intergenic 25.0%
! AATTACCTGTATCTAATTTG+TGG - chr5_3:62286408-62286427 Msa0823600:intron 25.0%
! CTGTCAATTTATTTGTCTAT+TGG - chr5_3:62286450-62286469 Msa0823600:CDS 25.0%
!! GCTTCTCATAGAATTGATTT+TGG - chr5_3:62283113-62283132 Msa0823600:three_prime_UTR 30.0%
!! AGACAGAATCACTTTTAGAA+AGG - chr5_3:62283137-62283156 Msa0823600:three_prime_UTR 30.0%
!!! TCTTTGTTTTCCATCATGTT+TGG + chr5_3:62283167-62283186 None:intergenic 30.0%
TAAAAAAAGCCATACCAAAC+AGG - chr5_3:62283222-62283241 Msa0823600:three_prime_UTR 30.0%
TGCTCTTACTAAAATACTAC+TGG - chr5_3:62283346-62283365 Msa0823600:intron 30.0%
AAATACTGAGAAGATAGAAC+GGG + chr5_3:62283557-62283576 None:intergenic 30.0%
! TTTTCACTGAAGAAACAAAC+CGG - chr5_3:62283574-62283593 Msa0823600:intron 30.0%
TGGCTATGTCATTATTTCAT+AGG + chr5_3:62283680-62283699 None:intergenic 30.0%
TCAACAAATAAATGGTTGGA+GGG + chr5_3:62283830-62283849 None:intergenic 30.0%
ACGACATATGCAGTTTAAAA+CGG + chr5_3:62283980-62283999 None:intergenic 30.0%
!!! CGATATGCCATTTTTTTTGT+TGG - chr5_3:62284273-62284292 Msa0823600:CDS 30.0%
!!! TGCCATTTTTTTTGTTGGTA+AGG - chr5_3:62284278-62284297 Msa0823600:CDS 30.0%
!!! CATTTTTTTTGTTGGTAAGG+CGG - chr5_3:62284281-62284300 Msa0823600:CDS 30.0%
TACAATCAAGAAAACGACAA+TGG - chr5_3:62284529-62284548 Msa0823600:CDS 30.0%
AACGACAATGGAATGAATTT+AGG - chr5_3:62284541-62284560 Msa0823600:CDS 30.0%
! TTCGCATTTTACATTCAATG+CGG + chr5_3:62284586-62284605 None:intergenic 30.0%
! GACTTCAGATCAAATTTTAG+AGG - chr5_3:62284686-62284705 Msa0823600:CDS 30.0%
GATGATAATTGCTCTATGAT+TGG - chr5_3:62284717-62284736 Msa0823600:CDS 30.0%
!!! AGTGATTTTTGATGATGTTC+GGG - chr5_3:62284977-62284996 Msa0823600:CDS 30.0%
AAATTTGATCCAGAAGATGT+AGG - chr5_3:62285002-62285021 Msa0823600:CDS 30.0%
!! TTGCATCGATTACTATTACA+AGG + chr5_3:62285032-62285051 None:intergenic 30.0%
CATCAATTCACAATCTTGTT+GGG + chr5_3:62285075-62285094 None:intergenic 30.0%
ACTTTGTTCCAAAAACATTC+TGG - chr5_3:62285146-62285165 Msa0823600:CDS 30.0%
! CATGAATACCAGAATGTTTT+TGG + chr5_3:62285157-62285176 None:intergenic 30.0%
ATTCTGGTATTCATGATGAA+GGG - chr5_3:62285162-62285181 Msa0823600:CDS 30.0%
ACTTAGGAAAATTTGCCATT+TGG + chr5_3:62285342-62285361 None:intergenic 30.0%
!! TATCTTCTCCTCTAAAACTT+AGG + chr5_3:62285358-62285377 None:intergenic 30.0%
TTTATCACGCTTTATGTCAA+GGG - chr5_3:62285402-62285421 Msa0823600:intron 30.0%
TCAATTGCATTTAGAAGAGT+GGG + chr5_3:62285482-62285501 None:intergenic 30.0%
TTCAATTGCATTTAGAAGAG+TGG + chr5_3:62285483-62285502 None:intergenic 30.0%
TGAAGAACTTGTCAAGATTA+TGG - chr5_3:62285561-62285580 Msa0823600:intron 30.0%
GGATTCACTTTGTAAAAGAT+TGG + chr5_3:62285619-62285638 None:intergenic 30.0%
AGGCATATGAGAAAAAGTTA+TGG - chr5_3:62285649-62285668 Msa0823600:intron 30.0%
GGCTAGACATGAAAATAATT+TGG - chr5_3:62285681-62285700 Msa0823600:intron 30.0%
!! TATAGTTTCATCGTTTTGGA+AGG - chr5_3:62285877-62285896 Msa0823600:intron 30.0%
AAATACGAAGCACATAGATA+TGG - chr5_3:62286219-62286238 Msa0823600:intron 30.0%
! TTTTGTATGGCAAAGGTTTT+TGG - chr5_3:62286273-62286292 Msa0823600:intron 30.0%
CATTCATAATAGAGAAAGGT+CGG + chr5_3:62286313-62286332 None:intergenic 30.0%
ACTCCATTCATAATAGAGAA+AGG + chr5_3:62286317-62286336 None:intergenic 30.0%
GAAAGGAAAACCAAACATGA+TGG - chr5_3:62283154-62283173 Msa0823600:three_prime_UTR 35.0%
GATGGAAAACAAAGAAACCA+CGG - chr5_3:62283172-62283191 Msa0823600:three_prime_UTR 35.0%
TTGAAGTTTAAGTGCCTGTT+TGG + chr5_3:62283239-62283258 None:intergenic 35.0%
AATACTGAGAAGATAGAACG+GGG + chr5_3:62283556-62283575 None:intergenic 35.0%
TTTCACTGAAGAAACAAACC+GGG - chr5_3:62283575-62283594 Msa0823600:intron 35.0%
AAAGAAACAAGTAGTCAACC+CGG + chr5_3:62283596-62283615 None:intergenic 35.0%
CAACAAATAAATGGTTGGAG+GGG + chr5_3:62283829-62283848 None:intergenic 35.0%
GTCAACAAATAAATGGTTGG+AGG + chr5_3:62283831-62283850 None:intergenic 35.0%
TCTCTTAGCTTCAAAGTAGA+AGG + chr5_3:62283857-62283876 None:intergenic 35.0%
CGCCTTACCAACAAAAAAAA+TGG + chr5_3:62284283-62284302 None:intergenic 35.0%
AAGTCGAAACAGAAAAGAGT+AGG - chr5_3:62284373-62284392 Msa0823600:CDS 35.0%
TGAAGCAACTGATCACAAAA+CGG - chr5_3:62284431-62284450 Msa0823600:CDS 35.0%
AACTGATCACAAAACGGAAA+AGG - chr5_3:62284437-62284456 Msa0823600:CDS 35.0%
CTTGGAATTGGAGTTGAAAA+TGG + chr5_3:62284615-62284634 None:intergenic 35.0%
! AAGTGCTCTAAACTTGGAAT+TGG + chr5_3:62284627-62284646 None:intergenic 35.0%
TGCTCTATGATTGGATTGTA+TGG - chr5_3:62284726-62284745 Msa0823600:CDS 35.0%
ATTGGATTGTATGGTAGCAA+GGG - chr5_3:62284735-62284754 Msa0823600:CDS 35.0%
!!! TCATGAGGTTTTATTTGCCA+CGG - chr5_3:62284818-62284837 Msa0823600:CDS 35.0%
!! CTTGCATAGTTCTGATATTC+AGG + chr5_3:62284854-62284873 None:intergenic 35.0%
GCATCAATTCACAATCTTGT+TGG + chr5_3:62285076-62285095 None:intergenic 35.0%
! ACCAAGTTGAATATCCCTTT+GGG + chr5_3:62285102-62285121 None:intergenic 35.0%
CAAGATTCCTCTGTAGATAA+GGG + chr5_3:62285125-62285144 None:intergenic 35.0%
CATTCTGGTATTCATGATGA+AGG - chr5_3:62285161-62285180 Msa0823600:CDS 35.0%
AAGTTTCCTTCGAATGTGAA+GGG - chr5_3:62285222-62285241 Msa0823600:intron 35.0%
ACCGAGAACAATTAAAGAAG+TGG - chr5_3:62285247-62285266 Msa0823600:intron 35.0%
CCCACTTCTTTAATTGTTCT+CGG + chr5_3:62285251-62285270 None:intergenic 35.0%
CCGAGAACAATTAAAGAAGT+GGG - chr5_3:62285248-62285267 Msa0823600:intron 35.0%
! CTCAATTGGTTTACCTCTTA+AGG + chr5_3:62285279-62285298 None:intergenic 35.0%
CTTAAGAGGTAAACCAATTG+AGG - chr5_3:62285277-62285296 Msa0823600:intron 35.0%
GATACTTTCCATTCCTCAAT+TGG + chr5_3:62285293-62285312 None:intergenic 35.0%
! AGATAGTCTGAGACATTCAA+TGG - chr5_3:62285316-62285335 Msa0823600:intron 35.0%
CTTTATCACGCTTTATGTCA+AGG - chr5_3:62285401-62285420 Msa0823600:intron 35.0%
TTATCACGCTTTATGTCAAG+GGG - chr5_3:62285403-62285422 Msa0823600:intron 35.0%
TTAGAAGAGTGGGTGAAATT+TGG + chr5_3:62285472-62285491 None:intergenic 35.0%
GAAAACTATGGAATTCCTCA+TGG - chr5_3:62285533-62285552 Msa0823600:intron 35.0%
AAGTGAATCCATCAGACATA+AGG - chr5_3:62285629-62285648 Msa0823600:intron 35.0%
AAAAAGTTATGGCGAAGACA+TGG - chr5_3:62285660-62285679 Msa0823600:intron 35.0%
!! TTTGAAGTGTCGAATTTGTC+CGG - chr5_3:62285744-62285763 Msa0823600:intron 35.0%
!!! GTTTTGGAAGGTATGTGAAT+TGG - chr5_3:62285889-62285908 Msa0823600:intron 35.0%
TTCATGTCGAAATTTCTTGC+TGG + chr5_3:62285971-62285990 None:intergenic 35.0%
!!! TTGAAAGTCGTTACTTTTGC+AGG - chr5_3:62286135-62286154 Msa0823600:intron 35.0%
CGACCTTTCTCTATTATGAA+TGG - chr5_3:62286311-62286330 Msa0823600:intron 35.0%
CACATTTCAAGAAATAGAGG+AGG + chr5_3:62286374-62286393 None:intergenic 35.0%
! TCTTTTCCCTCACATCTGTT+CGG + chr5_3:62282987-62283006 None:intergenic 40.0%
GTGAGGGTAAAGAAGGAAAA+AGG - chr5_3:62283018-62283037 Msa0823600:three_prime_UTR 40.0%
AAACAAAGAAACCACGGTAC+AGG - chr5_3:62283178-62283197 Msa0823600:three_prime_UTR 40.0%
GTTTAAGTGCCTGTTTGGTA+TGG + chr5_3:62283234-62283253 None:intergenic 40.0%
ACTTCAACCGAAACCACATT+AGG - chr5_3:62283252-62283271 Msa0823600:three_prime_UTR 40.0%
CCTAGTTCCTAATGTGGTTT+CGG + chr5_3:62283262-62283281 None:intergenic 40.0%
AACTCACCTAGTTCCTAATG+TGG + chr5_3:62283268-62283287 None:intergenic 40.0%
TCTTGCTTCGGAAAATCTGT+GGG + chr5_3:62283515-62283534 None:intergenic 40.0%
ATCTTGCTTCGGAAAATCTG+TGG + chr5_3:62283516-62283535 None:intergenic 40.0%
AGCAGATATACTCATGCAAG+AGG - chr5_3:62284491-62284510 Msa0823600:CDS 40.0%
GATTGGATTGTATGGTAGCA+AGG - chr5_3:62284734-62284753 Msa0823600:CDS 40.0%
TTCGATAGAAACAGTGAAGC+TGG - chr5_3:62284903-62284922 Msa0823600:CDS 40.0%
TGAATTGATGCACTCCCAAA+GGG - chr5_3:62285085-62285104 Msa0823600:CDS 40.0%
TCCCAAAGGGATATTCAACT+TGG - chr5_3:62285098-62285117 Msa0823600:CDS 40.0%
! GACCAAGTTGAATATCCCTT+TGG + chr5_3:62285103-62285122 None:intergenic 40.0%
CCAAGATTCCTCTGTAGATA+AGG + chr5_3:62285126-62285145 None:intergenic 40.0%
CCTTATCTACAGAGGAATCT+TGG - chr5_3:62285123-62285142 Msa0823600:CDS 40.0%
GAAGTTTCCTTCGAATGTGA+AGG - chr5_3:62285221-62285240 Msa0823600:intron 40.0%
GAGGTAAACCAATTGAGGAA+TGG - chr5_3:62285282-62285301 Msa0823600:intron 40.0%
TGAGACATTCAATGGCCAAA+TGG - chr5_3:62285324-62285343 Msa0823600:intron 40.0%
TATCACGCTTTATGTCAAGG+GGG - chr5_3:62285404-62285423 Msa0823600:intron 40.0%
TTCAAGACCTTCATGGATGA+TGG - chr5_3:62285428-62285447 Msa0823600:intron 40.0%
AAGTTCTTCAAGACACCATG+AGG + chr5_3:62285551-62285570 None:intergenic 40.0%
CTCATATGCCTTATGTCTGA+TGG + chr5_3:62285640-62285659 None:intergenic 40.0%
CTGCTCCACAAATTAGATAC+AGG + chr5_3:62286416-62286435 None:intergenic 40.0%
TGGAATACCGAACAGATGTG+AGG - chr5_3:62282977-62282996 Msa0823600:three_prime_UTR 45.0%
GGAATACCGAACAGATGTGA+GGG - chr5_3:62282978-62282997 Msa0823600:three_prime_UTR 45.0%
AGATGTGAGGGAAAAGAGAG+AGG - chr5_3:62282990-62283009 Msa0823600:three_prime_UTR 45.0%
AAAAGAGAGAGGTGAAGGTG+AGG - chr5_3:62283001-62283020 Msa0823600:three_prime_UTR 45.0%
AAAGAGAGAGGTGAAGGTGA+GGG - chr5_3:62283002-62283021 Msa0823600:three_prime_UTR 45.0%
GCTACAAATCTCAGCTTCTG+CGG + chr5_3:62283095-62283114 None:intergenic 45.0%
! TTTTAGCCTCAAACGCCGTT+TGG + chr5_3:62283207-62283226 None:intergenic 45.0%
CCGAAACCACATTAGGAACT+AGG - chr5_3:62283259-62283278 Msa0823600:three_prime_UTR 45.0%
! TGTTGGTAAGGCGGTAAAGA+TGG - chr5_3:62284290-62284309 Msa0823600:CDS 45.0%
! ATGGTGTTAGAGGACGATGA+AGG - chr5_3:62284309-62284328 Msa0823600:CDS 45.0%
TAAGCGATGCTGTGTTTGAG+TGG - chr5_3:62284460-62284479 Msa0823600:CDS 45.0%
!! GACGAGAAGTGCTCTAAACT+TGG + chr5_3:62284633-62284652 None:intergenic 45.0%
! AGTTTAGAGCACTTCTCGTC+TGG - chr5_3:62284633-62284652 Msa0823600:CDS 45.0%
CAAGGAATGCCTACATCTTC+TGG + chr5_3:62285014-62285033 None:intergenic 45.0%
ACAATCTTGTTGGGAACGTG+CGG + chr5_3:62285066-62285085 None:intergenic 45.0%
GTGAATTGATGCACTCCCAA+AGG - chr5_3:62285084-62285103 Msa0823600:CDS 45.0%
ACTTGGTCCCTTATCTACAG+AGG - chr5_3:62285115-62285134 Msa0823600:CDS 45.0%
GAAGTGGGATCTTCCTTAAG+AGG - chr5_3:62285263-62285282 Msa0823600:intron 45.0%
! GATACGCGCAACTCTTTTAC+AGG - chr5_3:62285374-62285393 Msa0823600:intron 45.0%
! AAGACCTTCATGGATGATGG+AGG - chr5_3:62285431-62285450 Msa0823600:intron 45.0%
! ACTCAGAGAGAGTGCAGAAA+TGG - chr5_3:62285709-62285728 Msa0823600:intron 45.0%
! AGTGTCGAATTTGTCCGGAA+AGG - chr5_3:62285749-62285768 Msa0823600:intron 45.0%
TCCGGAAAGGCTTATACAAC+CGG - chr5_3:62285762-62285781 Msa0823600:intron 45.0%
!!! ATTACTAAATAAATATTTTT+TGG - chr5_3:62283380-62283399 Msa0823600:intron 5.0%
!!! TTACTAAATAAATATTTTTT+GGG - chr5_3:62283381-62283400 Msa0823600:intron 5.0%
GAGGGAAAAGAGAGAGGTGA+AGG - chr5_3:62282996-62283015 Msa0823600:three_prime_UTR 50.0%
GGTGAAGGTGAGGGTAAAGA+AGG - chr5_3:62283011-62283030 Msa0823600:three_prime_UTR 50.0%
CAAATCTCAGCTTCTGCGGT+GGG + chr5_3:62283091-62283110 None:intergenic 50.0%
ACAAATCTCAGCTTCTGCGG+TGG + chr5_3:62283092-62283111 None:intergenic 50.0%
! GGCGGTAAAGATGGTGTTAG+AGG - chr5_3:62284299-62284318 Msa0823600:CDS 50.0%
TTGTATGGTAGCAAGGGCTC+TGG - chr5_3:62284741-62284760 Msa0823600:CDS 50.0%
!! AACAGCGTTGGCGAAAGCAA+TGG - chr5_3:62284767-62284786 Msa0823600:CDS 50.0%
!! ACAGCGTTGGCGAAAGCAAT+GGG - chr5_3:62284768-62284787 Msa0823600:CDS 50.0%
!! ATTCAGGTTTTGCGTCACCG+TGG + chr5_3:62284838-62284857 None:intergenic 50.0%
CGGTAACCCTTCACATTCGA+AGG + chr5_3:62285231-62285250 None:intergenic 50.0%
AGGGGGATTCAAGACCTTCA+TGG - chr5_3:62285421-62285440 Msa0823600:intron 50.0%
CAGTCCTCCATCATCCATGA+AGG + chr5_3:62285438-62285457 None:intergenic 50.0%
! ATGATGGAGGACTGCACACT+GGG - chr5_3:62285444-62285463 Msa0823600:intron 50.0%
CCCGGTTGTATAAGCCTTTC+CGG + chr5_3:62285766-62285785 None:intergenic 50.0%
CCGGAAAGGCTTATACAACC+GGG - chr5_3:62285763-62285782 Msa0823600:intron 50.0%
CCACGGTACAGGTCTCCAAA+CGG - chr5_3:62283189-62283208 Msa0823600:three_prime_UTR 55.0%
AGGTCTCCAAACGGCGTTTG+AGG - chr5_3:62283198-62283217 Msa0823600:three_prime_UTR 55.0%
! GGGCTCTGGTAAAACAGCGT+TGG - chr5_3:62284755-62284774 Msa0823600:CDS 55.0%
GTTGGGAACGTGCGGTCAAA+AGG + chr5_3:62285058-62285077 None:intergenic 55.0%
!! GATGATGGAGGACTGCACAC+TGG - chr5_3:62285443-62285462 Msa0823600:intron 55.0%
TGATGGAGGACTGCACACTG+GGG - chr5_3:62285445-62285464 Msa0823600:intron 55.0%
CCGTTTGGAGACCTGTACCG+TGG + chr5_3:62283192-62283211 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 62282958 62286501 62282958 ID=Msa0823600;Name=Msa0823600
chr5_3 mRNA 62282958 62286501 62282958 ID=Msa0823600-mRNA-1;Parent=Msa0823600;Name=Msa0823600-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0.5|0.66|0.66|0.5|0.33|3|537|471
chr5_3 exon 62282958 62283302 62282958 ID=Msa0823600-mRNA-1:exon:19367;Parent=Msa0823600-mRNA-1
chr5_3 exon 62283675 62285200 62283675 ID=Msa0823600-mRNA-1:exon:19366;Parent=Msa0823600-mRNA-1
chr5_3 exon 62286420 62286501 62286420 ID=Msa0823600-mRNA-1:exon:19365;Parent=Msa0823600-mRNA-1
chr5_3 CDS 62286420 62286501 62286420 ID=Msa0823600-mRNA-1:cds;Parent=Msa0823600-mRNA-1
chr5_3 CDS 62283867 62285200 62283867 ID=Msa0823600-mRNA-1:cds;Parent=Msa0823600-mRNA-1
chr5_3 three_prime_UTR 62283675 62283866 62283675 ID=Msa0823600-mRNA-1:three_prime_utr;Parent=Msa0823600-mRNA-1
chr5_3 three_prime_UTR 62282958 62283302 62282958 ID=Msa0823600-mRNA-1:three_prime_utr;Parent=Msa0823600-mRNA-1
Gene Sequence

>Msa0823600

ATGGGTGGGCAAGAGGAACTGGAATACCGAACAGATGTGAGGGAAAAGAGAGAGGTGAAGGTGAGGGTAAAGAAGGAAAAAGCAGCAGCAAATCTTCGATATGCCATTTTTTTTGTTGGTAAGGCGGTAAAGATGGTGTTAGAGGACGATGAAGGAAAGAAATATCTATCTGATTGGTTCGGCAAAGTCTTTGAAGAAGTCGAAACAGAAAAGAGTAGGCTGATTTCAAATCGAGATCTTGTGCGTGTAAAAGTTGAAGCAACTGATCACAAAACGGAAAAGGTAAGCGATGCTGTGTTTGAGTGGCTAAAAGAAGCAGATATACTCATGCAAGAGGTTGAAAATCTGACACTACAATCAAGAAAACGACAATGGAATGAATTTAGGAAATTGTTGAGAAAAATAACCGCATTGAATGTAAAATGCGAATTTGATCCATTTTCAACTCCAATTCCAAGTTTAGAGCACTTCTCGTCTGGAAATATTTTGTGTTTTAAGTCTAGAGATAAGACTTCAGATCAAATTTTAGAGGCACTGCGAGATGATAATTGCTCTATGATTGGATTGTATGGTAGCAAGGGCTCTGGTAAAACAGCGTTGGCGAAAGCAATGGGTGAGAAAGTTAAGTATCTAAAGATTTTTCATGAGGTTTTATTTGCCACGGTGACGCAAAACCTGAATATCAGAACTATGCAAGAAGAAATTGCTGACTTGTTAGACATGACATTCGATAGAAACAGTGAAGCTGGAAGAGCAAGAAGAATATTCTCAAGAATAGAAAGTATGAGTCGTCCAATTCTAGTGATTTTTGATGATGTTCGGGTAAAATTTGATCCAGAAGATGTAGGCATTCCTTGTAATAGTAATCGATGCAAGATCCTTTTGACCGCACGTTCCCAACAAGATTGTGAATTGATGCACTCCCAAAGGGATATTCAACTTGGTCCCTTATCTACAGAGGAATCTTGGACTTTGTTCCAAAAACATTCTGGTATTCATGATGAAGGGAACTCATCTTCATTTGACTTATTGAATGTGGCACGTGAAGTTTCCTTCGAATGTGAAGGGTTACCGAGAACAATTAAAGAAGTGGGATCTTCCTTAAGAGGTAAACCAATTGAGGAATGGAAAGTATCACTAGATAGTCTGAGACATTCAATGGCCAAATGGCAAATTTTCCTAAGTTTTAGAGGAGAAGATACGCGCAACTCTTTTACAGGTTCTCTTTATCACGCTTTATGTCAAGGGGGATTCAAGACCTTCATGGATGATGGAGGACTGCACACTGGGGACCAAATTTCACCCACTCTTCTAAATGCAATTGAAGAATCAAGGCTGTCGATTATCATTTTGTCTGAAAACTATGGAATTCCTCATGGTGTCTTGAAGAACTTGTCAAGATTATGGAGTGTATGA
Protein sequence

>Msa0823600

MGGQEELEYRTDVREKREVKVRVKKEKAAANLRYAIFFVGKAVKMVLEDDEGKKYLSDWFGKVFEEVETEKSRLISNRDLVRVKVEATDHKTEKVSDAVFEWLKEADILMQEVENLTLQSRKRQWNEFRKLLRKITALNVKCEFDPFSTPIPSLEHFSSGNILCFKSRDKTSDQILEALRDDNCSMIGLYGSKGSGKTALAKAMGEKVKYLKIFHEVLFATVTQNLNIRTMQEEIADLLDMTFDRNSEAGRARRIFSRIESMSRPILVIFDDVRVKFDPEDVGIPCNSNRCKILLTARSQQDCELMHSQRDIQLGPLSTEESWTLFQKHSGIHDEGNSSSFDLLNVAREVSFECEGLPRTIKEVGSSLRGKPIEEWKVSLDSLRHSMAKWQIFLSFRGEDTRNSFTGSLYHALCQGGFKTFMDDGGLHTGDQISPTLLNAIEESRLSIIILSENYGIPHGVLKNLSRLWSV*