Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0823800 | sp|Q8H107|ODO2B_ARATH | 73.522 | 389 | 100 | 1 | 109 | 494 | 76 | 464 | 0.0 | 585 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0823800 | G7K3L9 | 89.069 | 494 | 15 | 2 | 1 | 494 | 1 | 455 | 0.0 | 875 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0823800 | Msa0862800 | 0.864487 | 1.173415e-64 | -8.615850e-47 |
| Msa0823800 | Msa1390390 | 0.818573 | 1.827041e-52 | -8.615850e-47 |
| Msa0231290 | Msa0823800 | 0.822350 | 2.483183e-53 | -8.615850e-47 |
| Msa0323420 | Msa0823800 | 0.823213 | 1.563688e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0823800 | MtrunA17_Chr5g0444531 | 89.069 | 494 | 15 | 2 | 1 | 494 | 1 | 455 | 0.0 | 875 |
| Msa0823800 | MtrunA17_Chr2g0277631 | 88.687 | 495 | 13 | 4 | 1 | 494 | 1 | 453 | 0.0 | 861 |
| Msa0823800 | MtrunA17_Chr8g0343061 | 28.166 | 458 | 263 | 10 | 99 | 492 | 88 | 543 | 5.87e-39 | 149 |
| Msa0823800 | MtrunA17_Chr1g0197901 | 30.928 | 388 | 229 | 10 | 135 | 492 | 247 | 625 | 2.97e-33 | 133 |
| Msa0823800 | MtrunA17_Chr4g0067561 | 32.367 | 207 | 133 | 4 | 294 | 494 | 314 | 519 | 2.10e-22 | 100 |
| Msa0823800 | MtrunA17_Chr1g0210021 | 25.647 | 425 | 253 | 11 | 127 | 492 | 50 | 470 | 9.19e-22 | 97.8 |
| Msa0823800 | MtrunA17_Chr1g0200441 | 31.847 | 157 | 101 | 3 | 338 | 490 | 301 | 455 | 9.64e-18 | 85.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0823800 | AT4G26910.2 | 73.522 | 389 | 100 | 1 | 109 | 494 | 75 | 463 | 0.0 | 585 |
| Msa0823800 | AT4G26910.1 | 73.522 | 389 | 100 | 1 | 109 | 494 | 76 | 464 | 0.0 | 585 |
| Msa0823800 | AT5G55070.1 | 75.959 | 391 | 92 | 1 | 106 | 494 | 74 | 464 | 0.0 | 578 |
| Msa0823800 | AT5G55070.2 | 75.959 | 391 | 92 | 1 | 106 | 494 | 74 | 464 | 0.0 | 578 |
| Msa0823800 | AT4G26910.3 | 75.342 | 365 | 87 | 1 | 133 | 494 | 1 | 365 | 0.0 | 556 |
| Msa0823800 | AT1G54220.1 | 28.448 | 464 | 262 | 13 | 96 | 492 | 79 | 539 | 1.01e-38 | 148 |
| Msa0823800 | AT1G54220.2 | 28.448 | 464 | 262 | 13 | 96 | 492 | 79 | 539 | 1.01e-38 | 148 |
| Msa0823800 | AT3G13930.1 | 28.163 | 490 | 283 | 12 | 65 | 492 | 57 | 539 | 1.30e-38 | 148 |
| Msa0823800 | AT3G52200.1 | 37.500 | 232 | 132 | 5 | 269 | 492 | 411 | 637 | 6.50e-34 | 135 |
| Msa0823800 | AT3G52200.2 | 37.500 | 232 | 132 | 5 | 269 | 492 | 487 | 713 | 1.85e-33 | 134 |
| Msa0823800 | AT3G06850.1 | 29.208 | 202 | 139 | 3 | 296 | 494 | 282 | 482 | 1.91e-22 | 100 |
| Msa0823800 | AT3G06850.2 | 29.208 | 202 | 139 | 3 | 296 | 494 | 282 | 482 | 1.91e-22 | 100 |
| Msa0823800 | AT3G25860.1 | 30.894 | 246 | 149 | 7 | 255 | 492 | 248 | 480 | 4.08e-19 | 90.5 |
| Msa0823800 | AT1G34430.1 | 32.484 | 157 | 100 | 3 | 338 | 490 | 309 | 463 | 5.76e-18 | 86.7 |
Find 171 sgRNAs with CRISPR-Local
Find 532 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTCCCTTTCTAAGAAATT+AGG | 0.120357 | 5_3:-62632495 | Msa0823800:intron |
| AACAACTACGATGCATATTA+TGG | 0.197684 | 5_3:-62625486 | Msa0823800:three_prime_UTR |
| ATATCAAATGGTGGTGTTTA+TGG | 0.206829 | 5_3:-62626372 | Msa0823800:CDS |
| CCTCCGGCTCACTAGCCTTT+GGG | 0.238417 | 5_3:+62628237 | None:intergenic |
| CTTTGTGGAGCAGGTGCTTT+AGG | 0.246900 | 5_3:+62628176 | None:intergenic |
| ACCTGAGGTGGGTTGATAAT+AGG | 0.248348 | 5_3:+62626333 | None:intergenic |
| AAAGGAACCACTAACCTTAT+AGG | 0.265942 | 5_3:+62630836 | None:intergenic |
| TCTGTTGTAGTTTCAACTTT+AGG | 0.270428 | 5_3:+62628203 | None:intergenic |
| TGAAAAGCATGGAGTCAAAT+TGG | 0.271200 | 5_3:-62627118 | Msa0823800:CDS |
| TCAGCATAGCAAATGTGTTT+TGG | 0.289140 | 5_3:+62627976 | None:intergenic |
| TTTCCCTTTCTAAGAAATTA+GGG | 0.289484 | 5_3:-62632494 | Msa0823800:intron |
| GATTCTTCCTGAAGTAATAA+TGG | 0.308449 | 5_3:-62625463 | Msa0823800:three_prime_UTR |
| CCTGAGGTGGGTTGATAATA+GGG | 0.311518 | 5_3:+62626334 | None:intergenic |
| GGATTAATTCAAAACCTATA+AGG | 0.318232 | 5_3:-62630850 | Msa0823800:intron |
| TCTGTTTCAATTTGAGCAAT+TGG | 0.327060 | 5_3:+62628670 | None:intergenic |
| CTAGCCTTTGGGGCTGGCTT+AGG | 0.329554 | 5_3:+62628248 | None:intergenic |
| GTGTTATACGACAGAAATTT+CGG | 0.336408 | 5_3:+62630984 | None:intergenic |
| CTCTTCCATCAATGATTCTA+TGG | 0.339946 | 5_3:+62625807 | None:intergenic |
| TTAAATCCCATTATTACTTC+AGG | 0.342126 | 5_3:+62625456 | None:intergenic |
| GTCAAATTGGGACTTATGTC+TGG | 0.343056 | 5_3:-62627105 | Msa0823800:CDS |
| TGAGTCATATCTGATGATTC+AGG | 0.344543 | 5_3:+62625372 | None:intergenic |
| TCCTCCGGCTCACTAGCCTT+TGG | 0.345311 | 5_3:+62628236 | None:intergenic |
| GGCTTAGGAGCAGGTTTCTC+AGG | 0.352013 | 5_3:+62628263 | None:intergenic |
| TTAGAATTCTAATATCATAA+TGG | 0.357718 | 5_3:-62625677 | Msa0823800:three_prime_UTR |
| TACTTCAGTTGCTGAAAATT+CGG | 0.374754 | 5_3:-62633400 | Msa0823800:intron |
| GTTAGACGAAGGGTTGCTTC+TGG | 0.378442 | 5_3:-62633561 | Msa0823800:CDS |
| ATTCTTCCTGAAGTAATAAT+GGG | 0.381796 | 5_3:-62625462 | Msa0823800:three_prime_UTR |
| TATGACAAGGCTTCGGAAAC+GGG | 0.382455 | 5_3:-62628021 | Msa0823800:CDS |
| GGCTCACTAGCCTTTGGGGC+TGG | 0.385354 | 5_3:+62628242 | None:intergenic |
| GTTGGAGAGCTTTGTGGAGC+AGG | 0.388293 | 5_3:+62628167 | None:intergenic |
| GAAGCTCCGTGCTGATTATA+AGG | 0.392323 | 5_3:-62627151 | Msa0823800:CDS |
| GGCTCAGTTGGAGAGCTTTG+TGG | 0.393131 | 5_3:+62628161 | None:intergenic |
| TTACATATCAACTTCATTGA+AGG | 0.400847 | 5_3:+62627950 | None:intergenic |
| GTGAGCCGTCCCGCGGTTGT+TGG | 0.403007 | 5_3:-62625878 | Msa0823800:CDS |
| TTTGGGGCTGGCTTAGGAGC+AGG | 0.406888 | 5_3:+62628254 | None:intergenic |
| TCAATGACTGCATTTACAAT+TGG | 0.409888 | 5_3:+62626955 | None:intergenic |
| ACTCGTCTTTCTCTTTCCTT+AGG | 0.413435 | 5_3:+62628128 | None:intergenic |
| CGTTTCCGAAGCCTTGTCAT+AGG | 0.415332 | 5_3:+62628023 | None:intergenic |
| TATGACCATAGAATCATTGA+TGG | 0.416138 | 5_3:-62625812 | Msa0823800:CDS |
| CTATGACAAGGCTTCGGAAA+CGG | 0.424020 | 5_3:-62628022 | Msa0823800:CDS |
| ATTGTAAATGCAGTCATTGA+TGG | 0.425090 | 5_3:-62626952 | Msa0823800:CDS |
| AATGTCCCTGCATAGTAATA+AGG | 0.425481 | 5_3:+62629542 | None:intergenic |
| GGGTGTTGTTTAAACATGTT+GGG | 0.427216 | 5_3:+62625393 | None:intergenic |
| TAGAATTCTAATATCATAAT+GGG | 0.431216 | 5_3:-62625676 | Msa0823800:three_prime_UTR |
| CTTTATTGAGCAAAGCTCTT+GGG | 0.434895 | 5_3:-62625610 | Msa0823800:three_prime_UTR |
| TCGATCTTCCTTCCCCTCTC+AGG | 0.440666 | 5_3:-62633765 | Msa0823800:intron |
| GCAATGTACATCAGTGGCCT+TGG | 0.441430 | 5_3:+62625842 | None:intergenic |
| TGAACGCTTCCATGTTTGAA+TGG | 0.441701 | 5_3:+62629503 | None:intergenic |
| CATCAGATATGACTCATGTA+AGG | 0.442887 | 5_3:-62625365 | Msa0823800:three_prime_UTR |
| TGAGCGTAAGTAATCATGTT+TGG | 0.443623 | 5_3:-62633588 | Msa0823800:exon |
| AAATTCAAGGCCCAAACAAA+AGG | 0.444465 | 5_3:+62625650 | None:intergenic |
| GAAAAGCATGGAGTCAAATT+GGG | 0.444613 | 5_3:-62627117 | Msa0823800:CDS |
| TGCTTCTGGAGGCACATCTT+CGG | 0.444939 | 5_3:-62633547 | Msa0823800:intron |
| TTAGGAGCTTTCTTCTCCTC+CGG | 0.446856 | 5_3:+62628221 | None:intergenic |
| TTGTTTGGGCCTTGAATTTG+CGG | 0.453235 | 5_3:-62625646 | Msa0823800:three_prime_UTR |
| CCCTATTATCAACCCACCTC+AGG | 0.456935 | 5_3:-62626334 | Msa0823800:intron |
| CTCCGGCTCACTAGCCTTTG+GGG | 0.458282 | 5_3:+62628238 | None:intergenic |
| TCTTTATTGAGCAAAGCTCT+TGG | 0.458566 | 5_3:-62625611 | Msa0823800:three_prime_UTR |
| AGGGTGTTGTTTAAACATGT+TGG | 0.462098 | 5_3:+62625392 | None:intergenic |
| TAAATCACACCGCAAATTCA+AGG | 0.466222 | 5_3:+62625637 | None:intergenic |
| GCATTAAGCTCAGGAGGATG+TGG | 0.470710 | 5_3:-62631013 | Msa0823800:CDS |
| AGCCGTCCCGCGGTTGTTGG+AGG | 0.472187 | 5_3:-62625875 | Msa0823800:CDS |
| CGCAACAGTATCCCCTTCAT+TGG | 0.474947 | 5_3:+62628358 | None:intergenic |
| ACAACTACGATGCATATTAT+GGG | 0.475936 | 5_3:-62625485 | Msa0823800:three_prime_UTR |
| TAAGAGATTGCATTAAGCTC+AGG | 0.477722 | 5_3:-62631022 | Msa0823800:intron |
| TGATAACCTTATTACTATGC+AGG | 0.479202 | 5_3:-62629548 | Msa0823800:CDS |
| GTTGTTTCATACAATTTATG+AGG | 0.479445 | 5_3:+62625503 | None:intergenic |
| TGATGTTGTTGTCCCTCCAT+TGG | 0.485369 | 5_3:-62628868 | Msa0823800:CDS |
| ATCACACCTGACTCAGGACT+TGG | 0.485461 | 5_3:+62628510 | None:intergenic |
| AGCCCCAAAGGCTAGTGAGC+CGG | 0.486831 | 5_3:-62628240 | Msa0823800:CDS |
| TTTGGCCACCGTCGAAGTCT+TGG | 0.491393 | 5_3:-62632436 | Msa0823800:CDS |
| TGCGGATAAAATGAACTTTG+CGG | 0.492760 | 5_3:-62626481 | Msa0823800:CDS |
| GGAGGAAGCTGTGGCTCAGT+TGG | 0.493329 | 5_3:+62628149 | None:intergenic |
| CGTCTTTCTCTTTCCTTAGG+AGG | 0.498109 | 5_3:+62628131 | None:intergenic |
| TTGTAAATGCAGTCATTGAT+GGG | 0.501189 | 5_3:-62626951 | Msa0823800:CDS |
| TGATATTGTAAGAGTGCCTC+CGG | 0.502549 | 5_3:+62626389 | None:intergenic |
| AGGTTCCTATGACAAGGCTT+CGG | 0.505128 | 5_3:-62628028 | Msa0823800:CDS |
| TTTGCAAAGAAGGCTAATGC+TGG | 0.505721 | 5_3:-62626435 | Msa0823800:CDS |
| AACTTTATCAATTGATGAGA+TGG | 0.507014 | 5_3:-62626412 | Msa0823800:CDS |
| GGCACTCTTACAATATCAAA+TGG | 0.507367 | 5_3:-62626384 | Msa0823800:CDS |
| TTCTCAGGTGCAGTCTCAGA+TGG | 0.513900 | 5_3:+62628278 | None:intergenic |
| ACAAGATAGCAATCATTTCA+AGG | 0.513907 | 5_3:-62628328 | Msa0823800:CDS |
| ATTGATATCAGCATAGCTGT+TGG | 0.518591 | 5_3:-62626904 | Msa0823800:CDS |
| TGAGCCACAGCTTCCTCCTA+AGG | 0.520051 | 5_3:-62628144 | Msa0823800:CDS |
| GACTTCGACGGTGGCCAAAG+TGG | 0.520770 | 5_3:+62632440 | None:intergenic |
| GTGCAGCTTCTAGCCAATGA+AGG | 0.523506 | 5_3:-62628371 | Msa0823800:intron |
| TTATCCGCATTTCGGATGAC+AGG | 0.524831 | 5_3:+62626495 | None:intergenic |
| ACGGGTTGCTCAACGGTTGA+AGG | 0.526760 | 5_3:-62628003 | Msa0823800:CDS |
| TTGGCTGAATCCATCGAGGA+TGG | 0.531002 | 5_3:-62628849 | Msa0823800:CDS |
| TCAAATTGGGACTTATGTCT+GGG | 0.531187 | 5_3:-62627104 | Msa0823800:CDS |
| CAGAACATGCAAACCTGAGG+TGG | 0.531376 | 5_3:+62626321 | None:intergenic |
| GATGTTCCAAGTCCTGAGTC+AGG | 0.534338 | 5_3:-62628516 | Msa0823800:CDS |
| GAAGGGGATACTGTTGCGCC+AGG | 0.534623 | 5_3:-62628353 | Msa0823800:CDS |
| AAGGAAGATCGAGTTGAAGA+AGG | 0.535034 | 5_3:+62633776 | None:intergenic |
| GTCTTGGTAACGGACGACTT+TGG | 0.535243 | 5_3:-62632420 | Msa0823800:intron |
| GAGTCATATCTGATGATTCA+GGG | 0.535333 | 5_3:+62625373 | None:intergenic |
| AACTAGAGTTTCTTCCATTG+TGG | 0.536871 | 5_3:-62633369 | Msa0823800:CDS |
| TGCTCAAATTGAAACAGATA+AGG | 0.537580 | 5_3:-62628665 | Msa0823800:intron |
| TGCTAGAGTCCCATCCTCGA+TGG | 0.542822 | 5_3:+62628839 | None:intergenic |
| GGAAGAAACTCTAGTTGTGC+CGG | 0.544188 | 5_3:+62633376 | None:intergenic |
| CAGGTTAACCTGAGAGGGGA+AGG | 0.546465 | 5_3:+62633757 | None:intergenic |
| TCCTCGATGGATTCAGCCAA+TGG | 0.546717 | 5_3:+62628852 | None:intergenic |
| TTGGAGGAAATGTTGTTCCA+AGG | 0.547451 | 5_3:-62625859 | Msa0823800:CDS |
| TTCTTCCATTGTGGACAAAG+AGG | 0.549753 | 5_3:-62633360 | Msa0823800:intron |
| TTATCAATTGATGAGATGGC+CGG | 0.550379 | 5_3:-62626408 | Msa0823800:CDS |
| AAAGTGGTCACCGTCCACTT+TGG | 0.555150 | 5_3:-62632454 | Msa0823800:CDS |
| TGCTCCTAAGCCAGCCCCAA+AGG | 0.557645 | 5_3:-62628252 | Msa0823800:CDS |
| GGGAGCAGGGCCTGGTGACA+AGG | 0.557791 | 5_3:-62628707 | Msa0823800:intron |
| CAGTTGCTGAAAATTCGGTC+CGG | 0.561184 | 5_3:-62633395 | Msa0823800:CDS |
| TTCAGGATCACACCTGACTC+AGG | 0.562746 | 5_3:+62628504 | None:intergenic |
| AATTCAAGGCCCAAACAAAA+GGG | 0.563782 | 5_3:+62625651 | None:intergenic |
| TGCAGCTTCTAGCCAATGAA+GGG | 0.566756 | 5_3:-62628370 | Msa0823800:intron |
| CCCAAAGGCTAGTGAGCCGG+AGG | 0.568181 | 5_3:-62628237 | Msa0823800:CDS |
| ACACATTATTCTTCTCTCAT+CGG | 0.568372 | 5_3:-62633817 | Msa0823800:five_prime_UTR |
| ATGATTGCTATCTTGTTACC+TGG | 0.569069 | 5_3:+62628335 | None:intergenic |
| CTTTCCTTAGGAGGAAGCTG+TGG | 0.571886 | 5_3:+62628140 | None:intergenic |
| AAGAAGGCAGAGGAAGAGAT+CGG | 0.575798 | 5_3:+62633792 | None:intergenic |
| GATCGAGTTGAAGAAGGCAG+AGG | 0.578112 | 5_3:+62633782 | None:intergenic |
| TTCGGAAACGGGTTGCTCAA+CGG | 0.579901 | 5_3:-62628010 | Msa0823800:CDS |
| ATCAGATATGACTCATGTAA+GGG | 0.580858 | 5_3:-62625364 | Msa0823800:three_prime_UTR |
| TTCAATTGTGAGCCGTCCCG+CGG | 0.584894 | 5_3:-62625885 | Msa0823800:CDS |
| GAGATTGCATTAAGCTCAGG+AGG | 0.586283 | 5_3:-62631019 | Msa0823800:CDS |
| AAAGTGGACGGTGACCACTT+TGG | 0.586820 | 5_3:+62632456 | None:intergenic |
| ACCTATCCCTCTAAAACTAG+AGG | 0.587473 | 5_3:-62625539 | Msa0823800:three_prime_UTR |
| TGGCTGAATCCATCGAGGAT+GGG | 0.587628 | 5_3:-62628848 | Msa0823800:CDS |
| CATAGCTGTTGGAACTCCGA+AGG | 0.588524 | 5_3:-62626893 | Msa0823800:intron |
| CGATGGATTCAGCCAATGGA+GGG | 0.590845 | 5_3:+62628856 | None:intergenic |
| ATACCGTGGAGGACCCTCGC+AGG | 0.593381 | 5_3:-62625754 | Msa0823800:CDS |
| TTCCTCCAACAACCGCGGGA+CGG | 0.594469 | 5_3:+62625873 | None:intergenic |
| GATGCTTTCGTTGAAAAGCA+TGG | 0.597642 | 5_3:-62627129 | Msa0823800:CDS |
| AGACGAAGGGTTGCTTCTGG+AGG | 0.598412 | 5_3:-62633558 | Msa0823800:CDS |
| TGTTTGGTGTTGTTAGACGA+AGG | 0.600580 | 5_3:-62633572 | Msa0823800:CDS |
| AATGTAACGAAACCATGGCA+TGG | 0.600925 | 5_3:-62625336 | Msa0823800:three_prime_UTR |
| AACATTTCCTCCAACAACCG+CGG | 0.602311 | 5_3:+62625868 | None:intergenic |
| ACATATAAAGTGAATCTGAA+AGG | 0.605495 | 5_3:-62625721 | Msa0823800:exon |
| CAGTCTCAGATGGTGCAACG+TGG | 0.608587 | 5_3:+62628288 | None:intergenic |
| AAATACCTCTTTGTCCACAA+TGG | 0.614759 | 5_3:+62633355 | None:intergenic |
| GTTTGGTGTTGTTAGACGAA+GGG | 0.617432 | 5_3:-62633571 | Msa0823800:CDS |
| CCTATCCCTCTAAAACTAGA+GGG | 0.617927 | 5_3:-62625538 | Msa0823800:three_prime_UTR |
| CATTAAGCTCAGGAGGATGT+GGG | 0.618120 | 5_3:-62631012 | Msa0823800:CDS |
| TAGAATCATTGATGGAAGAG+AGG | 0.619261 | 5_3:-62625804 | Msa0823800:CDS |
| TCAACATTAACCTTGTCACC+AGG | 0.619340 | 5_3:+62628697 | None:intergenic |
| ACATTTCCTCCAACAACCGC+GGG | 0.622555 | 5_3:+62625869 | None:intergenic |
| CTGAGGTGGGTTGATAATAG+GGG | 0.623105 | 5_3:+62626335 | None:intergenic |
| TCGATGGATTCAGCCAATGG+AGG | 0.624022 | 5_3:+62628855 | None:intergenic |
| TCGACGGTGGCCAAAGTGGA+CGG | 0.632043 | 5_3:+62632444 | None:intergenic |
| TGAGTCAGGTGTGATCCTGA+AGG | 0.632483 | 5_3:-62628502 | Msa0823800:intron |
| TCAATTGATGAGATGGCCGG+AGG | 0.637833 | 5_3:-62626405 | Msa0823800:CDS |
| ATGTCGAGCAAAAGCCTGCG+AGG | 0.639988 | 5_3:+62625740 | None:intergenic |
| AATTTCTGTCGTATAACACC+TGG | 0.645494 | 5_3:-62630980 | Msa0823800:intron |
| GTGTTAATGTAACGAAACCA+TGG | 0.646250 | 5_3:-62625341 | Msa0823800:three_prime_UTR |
| AAGAGGCTTCCATTCAAACA+TGG | 0.648188 | 5_3:-62629512 | Msa0823800:CDS |
| CACCGTCGAAGTCTTGGTAA+CGG | 0.648489 | 5_3:-62632430 | Msa0823800:CDS |
| TCAGATATGACTCATGTAAG+GGG | 0.652323 | 5_3:-62625363 | Msa0823800:three_prime_UTR |
| GATAACCTTATTACTATGCA+GGG | 0.652810 | 5_3:-62629547 | Msa0823800:CDS |
| GTTAGAGCAATGTACATCAG+TGG | 0.653334 | 5_3:+62625836 | None:intergenic |
| CGTTACCAAGACTTCGACGG+TGG | 0.654384 | 5_3:+62632431 | None:intergenic |
| AGAACATGCAAACCTGAGGT+GGG | 0.654926 | 5_3:+62626322 | None:intergenic |
| TGTCGAGCAAAAGCCTGCGA+GGG | 0.657173 | 5_3:+62625741 | None:intergenic |
| AAGCCTGCGAGGGTCCTCCA+CGG | 0.659181 | 5_3:+62625751 | None:intergenic |
| ACTCTTACAATATCAAATGG+TGG | 0.666602 | 5_3:-62626381 | Msa0823800:CDS |
| AAGCATCCTTATAATCAGCA+CGG | 0.676021 | 5_3:+62627145 | None:intergenic |
| AGTCTCAGATGGTGCAACGT+GGG | 0.682584 | 5_3:+62628289 | None:intergenic |
| GAGACGGATCAAAGATACCG+TGG | 0.687859 | 5_3:-62625768 | Msa0823800:CDS |
| GTCCGTTACCAAGACTTCGA+CGG | 0.688760 | 5_3:+62632428 | None:intergenic |
| GCAGCTTCTAGCCAATGAAG+GGG | 0.691382 | 5_3:-62628369 | Msa0823800:intron |
| AAAACAGGTTAACCTGAGAG+GGG | 0.717670 | 5_3:+62633753 | None:intergenic |
| TCCATTGGCTGAATCCATCG+AGG | 0.719719 | 5_3:-62628853 | Msa0823800:CDS |
| TGTAAATGCAGTCATTGATG+GGG | 0.721128 | 5_3:-62626950 | Msa0823800:CDS |
| TGTGCCTGTCATCCGAAATG+CGG | 0.724515 | 5_3:-62626499 | Msa0823800:CDS |
| ACGGATCAAAGATACCGTGG+AGG | 0.738229 | 5_3:-62625765 | Msa0823800:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATAAAATTTAATATT+TGG | + | chr5_3:62626478-62626497 | None:intergenic | 0.0% |
| !!! | AAATTATTATTTGTTGAATT+AGG | - | chr5_3:62625569-62625588 | Msa0823800:three_prime_UTR | 10.0% |
| !! | AAGATAATATTAAAACTTTA+TGG | + | chr5_3:62625867-62625886 | None:intergenic | 10.0% |
| !! | ATATTTGCATATTAAAAAAA+TGG | - | chr5_3:62626893-62626912 | Msa0823800:intron | 10.0% |
| !! | ATATATAATAGTGAAAATTT+AGG | + | chr5_3:62629139-62629158 | None:intergenic | 10.0% |
| !! | AATAAATGATAATAAACAAA+TGG | + | chr5_3:62631924-62631943 | None:intergenic | 10.0% |
| !! | ATTTGTTTATTATCATTTAT+TGG | - | chr5_3:62631923-62631942 | Msa0823800:intron | 10.0% |
| !! | TATAAGATTAGAACAAAAAT+CGG | + | chr5_3:62625468-62625487 | None:intergenic | 15.0% |
| !! | ACAAGCAAAAATTTAAAAAT+AGG | + | chr5_3:62625702-62625721 | None:intergenic | 15.0% |
| !!! | ATAATTTTTTTATCCAAACA+TGG | + | chr5_3:62626071-62626090 | None:intergenic | 15.0% |
| !!! | ACTTATTTAAGTTTATTTAC+TGG | + | chr5_3:62627195-62627214 | None:intergenic | 15.0% |
| !! | TACACAATACAAAATTTATT+GGG | - | chr5_3:62627875-62627894 | Msa0823800:intron | 15.0% |
| !! | AAAAATTACATTTATTGGAA+TGG | - | chr5_3:62627993-62628012 | Msa0823800:CDS | 15.0% |
| !!! | TTTATTTTGTAAAAACATGT+TGG | - | chr5_3:62628405-62628424 | Msa0823800:intron | 15.0% |
| !! | TAGTTATAGTAATATTTAAG+TGG | - | chr5_3:62628465-62628484 | Msa0823800:intron | 15.0% |
| !! | ATTGTTAGAAAATGAAATAA+TGG | - | chr5_3:62628683-62628702 | Msa0823800:CDS | 15.0% |
| !! | ATCATTAGAAAATGAAAATA+TGG | - | chr5_3:62629088-62629107 | Msa0823800:intron | 15.0% |
| !!! | AATTTTAACTTTTATGAAAG+AGG | - | chr5_3:62629834-62629853 | Msa0823800:intron | 15.0% |
| !! | GATTTATTGTAATAGAATTT+AGG | - | chr5_3:62629933-62629952 | Msa0823800:intron | 15.0% |
| !! | TTATTTAATTAGTAAGAGTT+AGG | - | chr5_3:62630165-62630184 | Msa0823800:intron | 15.0% |
| !!! | ATATTTTTTGTTTTGATGTA+TGG | - | chr5_3:62630460-62630479 | Msa0823800:intron | 15.0% |
| !!! | TATTTTTTGTTTTGATGTAT+GGG | - | chr5_3:62630461-62630480 | Msa0823800:intron | 15.0% |
| !!! | TAAGCAAAATTTAACATTTT+AGG | + | chr5_3:62631453-62631472 | None:intergenic | 15.0% |
| !!! | TTATTTTATAGTACATTCTT+AGG | - | chr5_3:62632914-62632933 | Msa0823800:intron | 15.0% |
| !! | TTATGGTAATATTTAATCAT+TGG | - | chr5_3:62632938-62632957 | Msa0823800:intron | 15.0% |
| !! | TTAGAATTCTAATATCATAA+TGG | - | chr5_3:62633511-62633530 | Msa0823800:intron | 15.0% |
| !! | TAGAATTCTAATATCATAAT+GGG | - | chr5_3:62633512-62633531 | Msa0823800:intron | 15.0% |
| !! | AACTGAAGTATATAAAACAA+AGG | + | chr5_3:62625778-62625797 | None:intergenic | 20.0% |
| !! | TTTAATATTTGGATACTCTT+CGG | + | chr5_3:62626467-62626486 | None:intergenic | 20.0% |
| !!! | TTTTTGAAATTTTTCCGTAT+CGG | - | chr5_3:62626985-62627004 | Msa0823800:CDS | 20.0% |
| !! | CTACACAATACAAAATTTAT+TGG | - | chr5_3:62627874-62627893 | Msa0823800:intron | 20.0% |
| !!! | TTTATTGGGATAATTTTGTT+CGG | - | chr5_3:62627889-62627908 | Msa0823800:intron | 20.0% |
| !!! | TTTAAACAAAATTTGTTAGC+TGG | - | chr5_3:62628250-62628269 | Msa0823800:CDS | 20.0% |
| !! | TTATAGTAATATTTAAGTGG+CGG | - | chr5_3:62628468-62628487 | Msa0823800:intron | 20.0% |
| !!! | TACAAGAAAAAGTGTAAAAA+TGG | + | chr5_3:62628798-62628817 | None:intergenic | 20.0% |
| !!! | TGTAATAATCTGAAATTCTA+TGG | - | chr5_3:62629520-62629539 | Msa0823800:CDS | 20.0% |
| !! | AAGATAAACTTGAACTATAT+AGG | + | chr5_3:62629770-62629789 | None:intergenic | 20.0% |
| !!! | TGATTAGTGTAATTTTTTTC+TGG | - | chr5_3:62630216-62630235 | Msa0823800:intron | 20.0% |
| !!! | TCCTTTTTTATTTGTGATAA+AGG | - | chr5_3:62630288-62630307 | Msa0823800:intron | 20.0% |
| !! | TCCTTTATCACAAATAAAAA+AGG | + | chr5_3:62630292-62630311 | None:intergenic | 20.0% |
| !! | TCTACTTTGAATTAGAATAT+CGG | - | chr5_3:62631510-62631529 | Msa0823800:intron | 20.0% |
| !! | TTTCTGAACAACAAAAAATA+AGG | + | chr5_3:62631734-62631753 | None:intergenic | 20.0% |
| !! | AGACAAAAAAACAAAATCAA+TGG | + | chr5_3:62631840-62631859 | None:intergenic | 20.0% |
| !!! | ATTGATTTTGTTTTTTTGTC+TGG | - | chr5_3:62631839-62631858 | Msa0823800:intron | 20.0% |
| !!! | TTGATTTTGTTTTTTTGTCT+GGG | - | chr5_3:62631840-62631859 | Msa0823800:intron | 20.0% |
| !! | ATTGATCTGCAATTTATAAT+AGG | - | chr5_3:62632003-62632022 | Msa0823800:intron | 20.0% |
| !! | TATTCAATGAATTCGAAAAT+TGG | + | chr5_3:62632387-62632406 | None:intergenic | 20.0% |
| !!! | TTTTTTCTTATAATAGTGAC+CGG | - | chr5_3:62632471-62632490 | Msa0823800:CDS | 20.0% |
| !! | TCTTATTATGTAGAAAATCA+CGG | - | chr5_3:62632505-62632524 | Msa0823800:intron | 20.0% |
| !!! | TTACTGGTTTGAAATTTTTA+AGG | - | chr5_3:62632601-62632620 | Msa0823800:intron | 20.0% |
| !!! | AATTTTTGCTTGTTGATTTG+TGG | - | chr5_3:62625709-62625728 | Msa0823800:three_prime_UTR | 25.0% |
| !! | CTAATGTTGCTAAAGTTTTA+TGG | - | chr5_3:62626039-62626058 | Msa0823800:intron | 25.0% |
| ! | CAAAACAGATTTACACATTA+GGG | + | chr5_3:62626134-62626153 | None:intergenic | 25.0% |
| ! | ACAAAACAGATTTACACATT+AGG | + | chr5_3:62626135-62626154 | None:intergenic | 25.0% |
| ! | ACATCTCAAAAATAAAACTC+TGG | + | chr5_3:62626184-62626203 | None:intergenic | 25.0% |
| ! | ATAAGTTGTTTATCCAAACA+GGG | + | chr5_3:62626252-62626271 | None:intergenic | 25.0% |
| ! | TGTTTGGATAAACAACTTAT+GGG | - | chr5_3:62626252-62626271 | Msa0823800:intron | 25.0% |
| ! | ACATTTCCTTTATCTTTCTT+TGG | - | chr5_3:62626630-62626649 | Msa0823800:intron | 25.0% |
| !! | TTTCCCTTTCTAAGAAATTA+GGG | - | chr5_3:62626694-62626713 | Msa0823800:intron | 25.0% |
| ! | AAACCCTAATTTCTTAGAAA+GGG | + | chr5_3:62626700-62626719 | None:intergenic | 25.0% |
| ! | TCAAAAATCAAGATACGATA+CGG | + | chr5_3:62626972-62626991 | None:intergenic | 25.0% |
| !! | TTTCATTTTGTAACTTCTTC+TGG | - | chr5_3:62627298-62627317 | Msa0823800:intron | 25.0% |
| ! | ACAGATGATTGACAAAAATA+TGG | - | chr5_3:62627342-62627361 | Msa0823800:intron | 25.0% |
| ! | GATTACTAAAATACACAATG+GGG | + | chr5_3:62627370-62627389 | None:intergenic | 25.0% |
| ! | GGATTACTAAAATACACAAT+GGG | + | chr5_3:62627371-62627390 | None:intergenic | 25.0% |
| !! | ATAGAAAAATCTAGAATCAC+GGG | + | chr5_3:62627507-62627526 | None:intergenic | 25.0% |
| !! | CATAGAAAAATCTAGAATCA+CGG | + | chr5_3:62627508-62627527 | None:intergenic | 25.0% |
| ! | TCTATGGTTTGAAAAGAAAT+TGG | - | chr5_3:62627522-62627541 | Msa0823800:intron | 25.0% |
| ! | AAATTTATTATGTCTGTGAC+TGG | - | chr5_3:62627548-62627567 | Msa0823800:intron | 25.0% |
| ! | ATAACTTCAACCAAGTAAAA+GGG | + | chr5_3:62627666-62627685 | None:intergenic | 25.0% |
| ! | AATAACTTCAACCAAGTAAA+AGG | + | chr5_3:62627667-62627686 | None:intergenic | 25.0% |
| ! | TACTAGAAAAGAACAGTAAT+AGG | + | chr5_3:62627927-62627946 | None:intergenic | 25.0% |
| !! | TTACCTATTAGTTATTTCCT+TGG | - | chr5_3:62628114-62628133 | Msa0823800:intron | 25.0% |
| !!! | AAAAATAACACAAAAGTACC+AGG | + | chr5_3:62628229-62628248 | None:intergenic | 25.0% |
| ! | GGATTAATTCAAAACCTATA+AGG | - | chr5_3:62628338-62628357 | Msa0823800:CDS | 25.0% |
| !! | TTTTAACGTTAGATGGTTTT+TGG | + | chr5_3:62628521-62628540 | None:intergenic | 25.0% |
| ! | TTAAAATCAGGTTTGAACTT+TGG | - | chr5_3:62628535-62628554 | Msa0823800:intron | 25.0% |
| ! | TTGTTGATCTATTACTATTC+AGG | - | chr5_3:62629034-62629053 | Msa0823800:intron | 25.0% |
| ! | AGGTGAAGAAAATGAAAAAA+TGG | - | chr5_3:62629054-62629073 | Msa0823800:intron | 25.0% |
| ! | TAAGGAGTAAAGAATATAGA+AGG | + | chr5_3:62629187-62629206 | None:intergenic | 25.0% |
| !! | ATACAAGAAAAGTGTAAAAG+TGG | + | chr5_3:62629214-62629233 | None:intergenic | 25.0% |
| !!! | TCATTCTTTTTAGGAAAACA+TGG | - | chr5_3:62629367-62629386 | Msa0823800:intron | 25.0% |
| ! | TGATTAACTTCAACAGTAAT+AGG | - | chr5_3:62629447-62629466 | Msa0823800:intron | 25.0% |
| ! | GATTAACTTCAACAGTAATA+GGG | - | chr5_3:62629448-62629467 | Msa0823800:intron | 25.0% |
| ! | TTCACTTATTAATCAATTGG+TGG | + | chr5_3:62629572-62629591 | None:intergenic | 25.0% |
| ! | CTGTTCACTTATTAATCAAT+TGG | + | chr5_3:62629575-62629594 | None:intergenic | 25.0% |
| ! | TGATTAATAAGTGAACAGAA+TGG | - | chr5_3:62629577-62629596 | Msa0823800:intron | 25.0% |
| !! | GGAATATTTTCACAATATCA+TGG | - | chr5_3:62629855-62629874 | Msa0823800:intron | 25.0% |
| ! | AATCAAATATTAGCAATCAC+AGG | + | chr5_3:62630201-62630220 | None:intergenic | 25.0% |
| ! | GAACAAAATGTATATAGAGT+TGG | + | chr5_3:62630397-62630416 | None:intergenic | 25.0% |
| ! | AACAGCGTTAATGATTATTT+GGG | + | chr5_3:62630624-62630643 | None:intergenic | 25.0% |
| ! | AAACAGCGTTAATGATTATT+TGG | + | chr5_3:62630625-62630644 | None:intergenic | 25.0% |
| !!! | TAACTTTAGAATTCATGTGA+TGG | + | chr5_3:62630751-62630770 | None:intergenic | 25.0% |
| ! | TTACATATCAACTTCATTGA+AGG | + | chr5_3:62631241-62631260 | None:intergenic | 25.0% |
| ! | CATTCATTAAATGATGTATG+TGG | - | chr5_3:62631389-62631408 | Msa0823800:intron | 25.0% |
| ! | CATTCAATAAATGATGTATG+TGG | + | chr5_3:62631428-62631447 | None:intergenic | 25.0% |
| !! | ATTTTGCTTATAATAGTGAC+CGG | - | chr5_3:62631463-62631482 | Msa0823800:intron | 25.0% |
| !!! | TTTTTGTTGTTCAGAAAAAG+TGG | - | chr5_3:62631737-62631756 | Msa0823800:intron | 25.0% |
| !!! | TTTTGTTGTTCAGAAAAAGT+GGG | - | chr5_3:62631738-62631757 | Msa0823800:intron | 25.0% |
| ! | AAACTTATTCTACTCAATCA+TGG | - | chr5_3:62631808-62631827 | Msa0823800:intron | 25.0% |
| ! | AACTTATTCTACTCAATCAT+GGG | - | chr5_3:62631809-62631828 | Msa0823800:intron | 25.0% |
| ! | TATAAATTGCAGATCAATCA+GGG | + | chr5_3:62632001-62632020 | None:intergenic | 25.0% |
| ! | TTATAAATTGCAGATCAATC+AGG | + | chr5_3:62632002-62632021 | None:intergenic | 25.0% |
| ! | CAAAGTATGTTCTCAAATTA+TGG | - | chr5_3:62632112-62632131 | Msa0823800:intron | 25.0% |
| !! | TGTACTTACTTTGATCTTTT+TGG | - | chr5_3:62632180-62632199 | Msa0823800:intron | 25.0% |
| !! | TTTTTGCTAATTATAGTGAC+CGG | + | chr5_3:62632363-62632382 | None:intergenic | 25.0% |
| ! | TACATATAAACCAGATACAT+CGG | + | chr5_3:62632411-62632430 | None:intergenic | 25.0% |
| ! | GTAAATCAATGACATATGTA+TGG | + | chr5_3:62632564-62632583 | None:intergenic | 25.0% |
| !!! | TGGTTTGAAATTTTTAAGGT+TGG | - | chr5_3:62632605-62632624 | Msa0823800:intron | 25.0% |
| !!! | AATTTTTAAGGTTGGATTGA+AGG | - | chr5_3:62632613-62632632 | Msa0823800:intron | 25.0% |
| ! | AACTTTATCAATTGATGAGA+TGG | - | chr5_3:62632776-62632795 | Msa0823800:intron | 25.0% |
| ! | ATAGTACATTCTTAGGTTTA+TGG | - | chr5_3:62632921-62632940 | Msa0823800:intron | 25.0% |
| ! | TGTCATCAAACATATTTCAT+GGG | + | chr5_3:62632986-62633005 | None:intergenic | 25.0% |
| ! | TTGTCATCAAACATATTTCA+TGG | + | chr5_3:62632987-62633006 | None:intergenic | 25.0% |
| !!! | TCATTTTGATAAGTTACTAG+TGG | + | chr5_3:62633073-62633092 | None:intergenic | 25.0% |
| ! | AATTATCCAAATCTTACTAC+TGG | + | chr5_3:62633164-62633183 | None:intergenic | 25.0% |
| ! | ACATATAAAGTGAATCTGAA+AGG | - | chr5_3:62633467-62633486 | Msa0823800:intron | 25.0% |
| !! | GTTGTTTCATACAATTTATG+AGG | + | chr5_3:62633688-62633707 | None:intergenic | 25.0% |
| ! | ATTCTTCCTGAAGTAATAAT+GGG | - | chr5_3:62633726-62633745 | Msa0823800:intron | 25.0% |
| ! | TTAAATCCCATTATTACTTC+AGG | + | chr5_3:62633735-62633754 | None:intergenic | 25.0% |
| ACACATTATTCTTCTCTCAT+CGG | - | chr5_3:62625371-62625390 | Msa0823800:three_prime_UTR | 30.0% | |
| AAAATCGGTGAATGAAAAAC+AGG | + | chr5_3:62625453-62625472 | None:intergenic | 30.0% | |
| TACTTCAGTTGCTGAAAATT+CGG | - | chr5_3:62625788-62625807 | Msa0823800:CDS | 30.0% | |
| GTGTATGTTTGGTATCAAAA+TGG | + | chr5_3:62625965-62625984 | None:intergenic | 30.0% | |
| ! | CAATCATTTTCGTGTATGTT+TGG | + | chr5_3:62625976-62625995 | None:intergenic | 30.0% |
| ! | GATTGCCTGACTATTATTTT+TGG | - | chr5_3:62625991-62626010 | Msa0823800:intron | 30.0% |
| GCATTCCAAAAATAATAGTC+AGG | + | chr5_3:62625999-62626018 | None:intergenic | 30.0% | |
| CATAAGTTGTTTATCCAAAC+AGG | + | chr5_3:62626253-62626272 | None:intergenic | 30.0% | |
| CTGTTTGGATAAACAACTTA+TGG | - | chr5_3:62626251-62626270 | Msa0823800:intron | 30.0% | |
| GTTTGGATAAACAACTTATG+GGG | - | chr5_3:62626253-62626272 | Msa0823800:intron | 30.0% | |
| !!! | TCATCTATTTTGAAGTATCG+GGG | + | chr5_3:62626385-62626404 | None:intergenic | 30.0% |
| !!! | GTCATCTATTTTGAAGTATC+GGG | + | chr5_3:62626386-62626405 | None:intergenic | 30.0% |
| !!! | CGTCATCTATTTTGAAGTAT+CGG | + | chr5_3:62626387-62626406 | None:intergenic | 30.0% |
| ! | CTTTCCCTTTCTAAGAAATT+AGG | - | chr5_3:62626693-62626712 | Msa0823800:intron | 30.0% |
| GAAACCCTAATTTCTTAGAA+AGG | + | chr5_3:62626701-62626720 | None:intergenic | 30.0% | |
| !! | TTCAACTTTTTCTTCCAAAG+TGG | - | chr5_3:62626718-62626737 | Msa0823800:intron | 30.0% |
| AATATTGACGATTAAGAGAG+TGG | + | chr5_3:62626823-62626842 | None:intergenic | 30.0% | |
| ATTAACAAACACAAGAAACC+AGG | + | chr5_3:62626873-62626892 | None:intergenic | 30.0% | |
| CTTATGAAAACATCTAGTCT+GGG | + | chr5_3:62627058-62627077 | None:intergenic | 30.0% | |
| TGAAATAACTAGATGAACAC+AGG | + | chr5_3:62627283-62627302 | None:intergenic | 30.0% | |
| CTGGAAATAGAGATGTTAAA+TGG | - | chr5_3:62627317-62627336 | Msa0823800:intron | 30.0% | |
| CGGATTACTAAAATACACAA+TGG | + | chr5_3:62627372-62627391 | None:intergenic | 30.0% | |
| ! | CGTGATTCTAGATTTTTCTA+TGG | - | chr5_3:62627506-62627525 | Msa0823800:intron | 30.0% |
| GTAATTGTGCAATTTCAACA+TGG | - | chr5_3:62627626-62627645 | Msa0823800:intron | 30.0% | |
| ! | TGCTATTTGCTAATTGATTG+TGG | - | chr5_3:62627693-62627712 | Msa0823800:intron | 30.0% |
| CAAAGATAAAACACATTAGC+AGG | + | chr5_3:62628027-62628046 | None:intergenic | 30.0% | |
| ! | CTGCTAATGTGTTTTATCTT+TGG | - | chr5_3:62628025-62628044 | Msa0823800:CDS | 30.0% |
| ACTCTGACAATGAAAATATG+TGG | + | chr5_3:62628074-62628093 | None:intergenic | 30.0% | |
| ! | AGAGTACTTTGTTTGTGTTT+AGG | - | chr5_3:62628089-62628108 | Msa0823800:intron | 30.0% |
| ! | CTATTAGTTATTTCCTTGGT+GGG | - | chr5_3:62628118-62628137 | Msa0823800:intron | 30.0% |
| GTGTTATACGACAGAAATTT+CGG | + | chr5_3:62628207-62628226 | None:intergenic | 30.0% | |
| ! | ACAATCCTTTTTCTTTTTGC+AGG | - | chr5_3:62628310-62628329 | Msa0823800:CDS | 30.0% |
| TTCAAAACCTATAAGGTTAG+TGG | - | chr5_3:62628345-62628364 | Msa0823800:CDS | 30.0% | |
| ATACTGCCTATGACTAATAA+AGG | + | chr5_3:62628373-62628392 | None:intergenic | 30.0% | |
| AACCATCTAACGTTAAAATC+AGG | - | chr5_3:62628523-62628542 | Msa0823800:CDS | 30.0% | |
| !! | AACCTGATTTTAACGTTAGA+TGG | + | chr5_3:62628528-62628547 | None:intergenic | 30.0% |
| !! | ATTTAGTGGCTCTTTTGTTT+TGG | - | chr5_3:62628893-62628912 | Msa0823800:intron | 30.0% |
| TTAACTTCTCACATGTAGTT+TGG | - | chr5_3:62628988-62629007 | Msa0823800:intron | 30.0% | |
| !!! | GATAACCAAGCTTTTAAGTT+TGG | - | chr5_3:62629291-62629310 | Msa0823800:intron | 30.0% |
| ! | CATTAGACGTCATTCTTTTT+AGG | - | chr5_3:62629358-62629377 | Msa0823800:intron | 30.0% |
| ! | AATTGGTGGCAATAAGAATA+AGG | + | chr5_3:62629558-62629577 | None:intergenic | 30.0% |
| TGATAACCTTATTACTATGC+AGG | - | chr5_3:62629640-62629659 | Msa0823800:intron | 30.0% | |
| GATAACCTTATTACTATGCA+GGG | - | chr5_3:62629641-62629660 | Msa0823800:intron | 30.0% | |
| ! | CGTTCATTTTCTTCAGATAA+TGG | - | chr5_3:62629702-62629721 | Msa0823800:intron | 30.0% |
| TATAGAAGAATGACAATCCT+TGG | - | chr5_3:62630001-62630020 | Msa0823800:intron | 30.0% | |
| ATAGAAGAATGACAATCCTT+GGG | - | chr5_3:62630002-62630021 | Msa0823800:intron | 30.0% | |
| GTAATGTTGTTAAGTTAAGC+AGG | + | chr5_3:62630073-62630092 | None:intergenic | 30.0% | |
| TTAGCAATCACAGGAAAATT+TGG | + | chr5_3:62630192-62630211 | None:intergenic | 30.0% | |
| !! | CAGTTACTTGTTATTTGTAG+TGG | - | chr5_3:62630418-62630437 | Msa0823800:intron | 30.0% |
| TCTGTTTCAATTTGAGCAAT+TGG | + | chr5_3:62630521-62630540 | None:intergenic | 30.0% | |
| TGCTCAAATTGAAACAGATA+AGG | - | chr5_3:62630523-62630542 | Msa0823800:intron | 30.0% | |
| !! | ACATTCAATTGTTTCTGTGA+AGG | - | chr5_3:62630561-62630580 | Msa0823800:intron | 30.0% |
| !! | AATTGTTTCTGTGAAGGATT+TGG | - | chr5_3:62630567-62630586 | Msa0823800:intron | 30.0% |
| TATTTGGGAACAAAGAAAAC+TGG | + | chr5_3:62630609-62630628 | None:intergenic | 30.0% | |
| ATCTATTAAACAGTACCTTC+AGG | + | chr5_3:62630704-62630723 | None:intergenic | 30.0% | |
| ACAAGATAGCAATCATTTCA+AGG | - | chr5_3:62630860-62630879 | Msa0823800:intron | 30.0% | |
| TCTGTTGTAGTTTCAACTTT+AGG | + | chr5_3:62630988-62631007 | None:intergenic | 30.0% | |
| ATGAAAATCCCTAAATCTTG+AGG | + | chr5_3:62631306-62631325 | None:intergenic | 30.0% | |
| AATTAGAATATCGGAAACTG+TGG | - | chr5_3:62631519-62631538 | Msa0823800:intron | 30.0% | |
| ATTAGAATATCGGAAACTGT+GGG | - | chr5_3:62631520-62631539 | Msa0823800:intron | 30.0% | |
| !! | TTTGTTGTTCAGAAAAAGTG+GGG | - | chr5_3:62631739-62631758 | Msa0823800:intron | 30.0% |
| !! | TGGTGCTATACTTATTATAC+TGG | - | chr5_3:62631943-62631962 | Msa0823800:intron | 30.0% |
| !! | CTTACTTTGATCTTTTTGGT+AGG | - | chr5_3:62632184-62632203 | Msa0823800:intron | 30.0% |
| TCAATGACTGCATTTACAAT+TGG | + | chr5_3:62632236-62632255 | None:intergenic | 30.0% | |
| ATTGTAAATGCAGTCATTGA+TGG | - | chr5_3:62632236-62632255 | Msa0823800:intron | 30.0% | |
| TTGTAAATGCAGTCATTGAT+GGG | - | chr5_3:62632237-62632256 | Msa0823800:intron | 30.0% | |
| ! | AGTTCATTTTATCCGCATTT+CGG | + | chr5_3:62632704-62632723 | None:intergenic | 30.0% |
| !! | GATCAATGTTTTTGCAAAGA+AGG | - | chr5_3:62632743-62632762 | Msa0823800:intron | 30.0% |
| ACTCTTACAATATCAAATGG+TGG | - | chr5_3:62632807-62632826 | Msa0823800:intron | 30.0% | |
| ! | ATATCAAATGGTGGTGTTTA+TGG | - | chr5_3:62632816-62632835 | Msa0823800:intron | 30.0% |
| TGCTAAGAAGTCACTTATTA+TGG | - | chr5_3:62632888-62632907 | Msa0823800:intron | 30.0% | |
| GTCATCAAACATATTTCATG+GGG | + | chr5_3:62632985-62633004 | None:intergenic | 30.0% | |
| ! | TATGTTTGATGACAAGAAGT+AGG | - | chr5_3:62632992-62633011 | Msa0823800:intron | 30.0% |
| TATGACCATAGAATCATTGA+TGG | - | chr5_3:62633376-62633395 | Msa0823800:CDS | 30.0% | |
| AACAACTACGATGCATATTA+TGG | - | chr5_3:62633702-62633721 | Msa0823800:intron | 30.0% | |
| ACAACTACGATGCATATTAT+GGG | - | chr5_3:62633703-62633722 | Msa0823800:intron | 30.0% | |
| GATTCTTCCTGAAGTAATAA+TGG | - | chr5_3:62633725-62633744 | Msa0823800:intron | 30.0% | |
| ATCAGATATGACTCATGTAA+GGG | - | chr5_3:62633824-62633843 | Msa0823800:five_prime_UTR | 30.0% | |
| AAAAACAGGTTAACCTGAGA+GGG | + | chr5_3:62625439-62625458 | None:intergenic | 35.0% | |
| TGAGCGTAAGTAATCATGTT+TGG | - | chr5_3:62625600-62625619 | Msa0823800:three_prime_UTR | 35.0% | |
| AACTAGAGTTTCTTCCATTG+TGG | - | chr5_3:62625819-62625838 | Msa0823800:CDS | 35.0% | |
| AAATACCTCTTTGTCCACAA+TGG | + | chr5_3:62625836-62625855 | None:intergenic | 35.0% | |
| TTTATGGTTGTGACCATGTT+TGG | - | chr5_3:62626055-62626074 | Msa0823800:intron | 35.0% | |
| !! | TCTGTTTTGTTCCTTGCTAT+AGG | - | chr5_3:62626145-62626164 | Msa0823800:intron | 35.0% |
| GGGTCACAATCATAAAAGTT+CGG | + | chr5_3:62626232-62626251 | None:intergenic | 35.0% | |
| TTTATGATTGTGACCCTGTT+TGG | - | chr5_3:62626236-62626255 | Msa0823800:intron | 35.0% | |
| TTGGCACCAAAGAAAGATAA+AGG | + | chr5_3:62626639-62626658 | None:intergenic | 35.0% | |
| GAAAGATGCAATTGTTTGTG+TGG | + | chr5_3:62626678-62626697 | None:intergenic | 35.0% | |
| GCTTATGAAAACATCTAGTC+TGG | + | chr5_3:62627059-62627078 | None:intergenic | 35.0% | |
| TAACTAGATGAACACAGGAT+GGG | + | chr5_3:62627278-62627297 | None:intergenic | 35.0% | |
| ATAACTAGATGAACACAGGA+TGG | + | chr5_3:62627279-62627298 | None:intergenic | 35.0% | |
| ! | AATTTCAACATGGTAGTGCA+AGG | - | chr5_3:62627636-62627655 | Msa0823800:intron | 35.0% |
| !!! | ATCTTTGGCTTTTCATCTCT+AGG | - | chr5_3:62628040-62628059 | Msa0823800:intron | 35.0% |
| !!! | TCTTTGGCTTTTCATCTCTA+GGG | - | chr5_3:62628041-62628060 | Msa0823800:intron | 35.0% |
| CCACCAAGGAAATAACTAAT+AGG | + | chr5_3:62628120-62628139 | None:intergenic | 35.0% | |
| ! | CCTATTAGTTATTTCCTTGG+TGG | - | chr5_3:62628117-62628136 | Msa0823800:intron | 35.0% |
| TAAGAGATTGCATTAAGCTC+AGG | - | chr5_3:62628166-62628185 | Msa0823800:CDS | 35.0% | |
| AATTTCTGTCGTATAACACC+TGG | - | chr5_3:62628208-62628227 | Msa0823800:CDS | 35.0% | |
| !! | CAAAATTTGTTAGCTGGTAC+AGG | - | chr5_3:62628256-62628275 | Msa0823800:CDS | 35.0% |
| AGCATCCTGCAAAAAGAAAA+AGG | + | chr5_3:62628318-62628337 | None:intergenic | 35.0% | |
| ! | TTTTTCTTTTTGCAGGATGC+TGG | - | chr5_3:62628317-62628336 | Msa0823800:CDS | 35.0% |
| AAAGGAACCACTAACCTTAT+AGG | + | chr5_3:62628355-62628374 | None:intergenic | 35.0% | |
| GTGGTTCCTTTATTAGTCAT+AGG | - | chr5_3:62628364-62628383 | Msa0823800:CDS | 35.0% | |
| ! | GTGCTTGATCTTATTTGTCA+TGG | + | chr5_3:62628497-62628516 | None:intergenic | 35.0% |
| TTTCCATTTCCTAACCAAAC+AGG | - | chr5_3:62628620-62628639 | Msa0823800:intron | 35.0% | |
| AGGGGAAGGAAATGAAAAAA+TGG | - | chr5_3:62628649-62628668 | Msa0823800:intron | 35.0% | |
| ATGGCAGCTAAAAACATAGA+AGG | + | chr5_3:62628779-62628798 | None:intergenic | 35.0% | |
| TCATATCGTGCATTCATTGT+CGG | - | chr5_3:62628851-62628870 | Msa0823800:CDS | 35.0% | |
| !!! | TTTTGTTTTGGAAGGAAGCA+TGG | - | chr5_3:62628905-62628924 | Msa0823800:intron | 35.0% |
| AAAAGCTTGGTTATCATCTG+AGG | + | chr5_3:62629286-62629305 | None:intergenic | 35.0% | |
| !!! | AACCAAGCTTTTAAGTTTGG+TGG | - | chr5_3:62629294-62629313 | Msa0823800:intron | 35.0% |
| !! | TTGCTGTTTCTTATTGTCAG+TGG | - | chr5_3:62629609-62629628 | Msa0823800:intron | 35.0% |
| AATGTCCCTGCATAGTAATA+AGG | + | chr5_3:62629649-62629668 | None:intergenic | 35.0% | |
| AGATAACTGCTCATGTGTTA+TGG | - | chr5_3:62629801-62629820 | Msa0823800:intron | 35.0% | |
| ! | AAGTGTATTTCTATCCAGCA+TGG | - | chr5_3:62629978-62629997 | Msa0823800:intron | 35.0% |
| CTGGCATTTATGTTGTTCAA+TGG | - | chr5_3:62630235-62630254 | Msa0823800:intron | 35.0% | |
| ATGATTGCTATCTTGTTACC+TGG | + | chr5_3:62630856-62630875 | None:intergenic | 35.0% | |
| ! | AATGTCTGCCTTCATTTTCA+AGG | - | chr5_3:62631140-62631159 | Msa0823800:intron | 35.0% |
| CATAGGAACCTTGAAAATGA+AGG | + | chr5_3:62631151-62631170 | None:intergenic | 35.0% | |
| !! | TTTTCAAGGTTCCTATGACA+AGG | - | chr5_3:62631154-62631173 | Msa0823800:intron | 35.0% |
| ! | CAGCATAGCAAATGTGTTTT+GGG | + | chr5_3:62631214-62631233 | None:intergenic | 35.0% |
| ! | TCAGCATAGCAAATGTGTTT+TGG | + | chr5_3:62631215-62631234 | None:intergenic | 35.0% |
| ! | TGAGTATTGCCTCAAGATTT+AGG | - | chr5_3:62631294-62631313 | Msa0823800:intron | 35.0% |
| ! | GAGTATTGCCTCAAGATTTA+GGG | - | chr5_3:62631295-62631314 | Msa0823800:intron | 35.0% |
| ATATTTCCTATTACACCCTC+AGG | - | chr5_3:62631332-62631351 | Msa0823800:intron | 35.0% | |
| TGCTTATAATAGTGACCTGA+GGG | + | chr5_3:62631350-62631369 | None:intergenic | 35.0% | |
| TTGCTTATAATAGTGACCTG+AGG | + | chr5_3:62631351-62631370 | None:intergenic | 35.0% | |
| AACTGTGGGCATATTTATTG+TGG | - | chr5_3:62631534-62631553 | Msa0823800:intron | 35.0% | |
| ATCTGCATACATATGCACTT+GGG | - | chr5_3:62631767-62631786 | Msa0823800:intron | 35.0% | |
| !!! | TTTGTTTTTTTGTCTGGGTG+AGG | - | chr5_3:62631845-62631864 | Msa0823800:intron | 35.0% |
| !!! | TTGTTTTTTTGTCTGGGTGA+GGG | - | chr5_3:62631846-62631865 | Msa0823800:intron | 35.0% |
| TGTTACTCGACATAAGAACT+GGG | + | chr5_3:62631882-62631901 | None:intergenic | 35.0% | |
| ATGTTACTCGACATAAGAAC+TGG | + | chr5_3:62631883-62631902 | None:intergenic | 35.0% | |
| TCGAGTAACATGATAGACAA+GGG | - | chr5_3:62631892-62631911 | Msa0823800:intron | 35.0% | |
| AAGCATCCTTATAATCAGCA+CGG | + | chr5_3:62632046-62632065 | None:intergenic | 35.0% | |
| ! | TGAAAAGCATGGAGTCAAAT+TGG | - | chr5_3:62632070-62632089 | Msa0823800:intron | 35.0% |
| ! | GAAAAGCATGGAGTCAAATT+GGG | - | chr5_3:62632071-62632090 | Msa0823800:intron | 35.0% |
| TCAAATTGGGACTTATGTCT+GGG | - | chr5_3:62632084-62632103 | Msa0823800:intron | 35.0% | |
| TGTAAATGCAGTCATTGATG+GGG | - | chr5_3:62632238-62632257 | Msa0823800:intron | 35.0% | |
| ATTGATATCAGCATAGCTGT+TGG | - | chr5_3:62632284-62632303 | Msa0823800:intron | 35.0% | |
| TAGTAAATAAGGGAAGGTTG+AGG | + | chr5_3:62632334-62632353 | None:intergenic | 35.0% | |
| AGGGAATAGTAAATAAGGGA+AGG | + | chr5_3:62632340-62632359 | None:intergenic | 35.0% | |
| CATTGAATAACCGATGTATC+TGG | - | chr5_3:62632398-62632417 | Msa0823800:intron | 35.0% | |
| TTTCTTATAATAGTGACCGG+AGG | - | chr5_3:62632474-62632493 | Msa0823800:CDS | 35.0% | |
| TTCTTATAATAGTGACCGGA+GGG | - | chr5_3:62632475-62632494 | Msa0823800:CDS | 35.0% | |
| TAATAAGAACTTACTCCCTC+CGG | + | chr5_3:62632493-62632512 | None:intergenic | 35.0% | |
| TATGTAGAAAATCACGGTGT+TGG | - | chr5_3:62632511-62632530 | Msa0823800:intron | 35.0% | |
| ATGTAGAAAATCACGGTGTT+GGG | - | chr5_3:62632512-62632531 | Msa0823800:intron | 35.0% | |
| TCAATTGACGTTGTCATTAC+TGG | - | chr5_3:62632585-62632604 | Msa0823800:intron | 35.0% | |
| TGCGGATAAAATGAACTTTG+CGG | - | chr5_3:62632707-62632726 | Msa0823800:intron | 35.0% | |
| TTATCAATTGATGAGATGGC+CGG | - | chr5_3:62632780-62632799 | Msa0823800:intron | 35.0% | |
| GGCACTCTTACAATATCAAA+TGG | - | chr5_3:62632804-62632823 | Msa0823800:intron | 35.0% | |
| AAAACGCATGAAATTCCAGA+TGG | + | chr5_3:62633023-62633042 | None:intergenic | 35.0% | |
| CTTACTACTGGTAAGGAAAA+GGG | + | chr5_3:62633152-62633171 | None:intergenic | 35.0% | |
| TCTTACTACTGGTAAGGAAA+AGG | + | chr5_3:62633153-62633172 | None:intergenic | 35.0% | |
| TCCTTACCAGTAGTAAGATT+TGG | - | chr5_3:62633155-62633174 | Msa0823800:intron | 35.0% | |
| TCCAAATCTTACTACTGGTA+AGG | + | chr5_3:62633159-62633178 | None:intergenic | 35.0% | |
| ! | TCTCATGCAGCTATTGTTTT+TGG | - | chr5_3:62633257-62633276 | Msa0823800:intron | 35.0% |
| CTCTTCCATCAATGATTCTA+TGG | + | chr5_3:62633384-62633403 | None:intergenic | 35.0% | |
| TAGAATCATTGATGGAAGAG+AGG | - | chr5_3:62633384-62633403 | Msa0823800:CDS | 35.0% | |
| !!! | ATAATGGGTACCCTTTTGTT+TGG | - | chr5_3:62633527-62633546 | Msa0823800:intron | 35.0% |
| !! | TAATGGGTACCCTTTTGTTT+GGG | - | chr5_3:62633528-62633547 | Msa0823800:intron | 35.0% |
| AATTCAAGGCCCAAACAAAA+GGG | + | chr5_3:62633540-62633559 | None:intergenic | 35.0% | |
| AAATTCAAGGCCCAAACAAA+AGG | + | chr5_3:62633541-62633560 | None:intergenic | 35.0% | |
| TAAATCACACCGCAAATTCA+AGG | + | chr5_3:62633554-62633573 | None:intergenic | 35.0% | |
| TCTTTATTGAGCAAAGCTCT+TGG | - | chr5_3:62633577-62633596 | Msa0823800:exon | 35.0% | |
| CTTTATTGAGCAAAGCTCTT+GGG | - | chr5_3:62633578-62633597 | Msa0823800:exon | 35.0% | |
| !! | TTTTAGAGGGATAGGTGAAA+AGG | + | chr5_3:62633645-62633664 | None:intergenic | 35.0% |
| !! | GGGTGTTGTTTAAACATGTT+GGG | + | chr5_3:62633798-62633817 | None:intergenic | 35.0% |
| !! | AGGGTGTTGTTTAAACATGT+TGG | + | chr5_3:62633799-62633818 | None:intergenic | 35.0% |
| GAGTCATATCTGATGATTCA+GGG | + | chr5_3:62633818-62633837 | None:intergenic | 35.0% | |
| TGAGTCATATCTGATGATTC+AGG | + | chr5_3:62633819-62633838 | None:intergenic | 35.0% | |
| CATCAGATATGACTCATGTA+AGG | - | chr5_3:62633823-62633842 | Msa0823800:five_prime_UTR | 35.0% | |
| TCAGATATGACTCATGTAAG+GGG | - | chr5_3:62633825-62633844 | Msa0823800:five_prime_UTR | 35.0% | |
| GTGTTAATGTAACGAAACCA+TGG | - | chr5_3:62633847-62633866 | Msa0823800:five_prime_UTR | 35.0% | |
| !! | AAGGAAGATCGAGTTGAAGA+AGG | + | chr5_3:62625415-62625434 | None:intergenic | 40.0% |
| AAAACAGGTTAACCTGAGAG+GGG | + | chr5_3:62625438-62625457 | None:intergenic | 40.0% | |
| GAAAAACAGGTTAACCTGAG+AGG | + | chr5_3:62625440-62625459 | None:intergenic | 40.0% | |
| !! | TGTTTGGTGTTGTTAGACGA+AGG | - | chr5_3:62625616-62625635 | Msa0823800:three_prime_UTR | 40.0% |
| !! | GTTTGGTGTTGTTAGACGAA+GGG | - | chr5_3:62625617-62625636 | Msa0823800:three_prime_UTR | 40.0% |
| TTCTTCCATTGTGGACAAAG+AGG | - | chr5_3:62625828-62625847 | Msa0823800:CDS | 40.0% | |
| ATCATCAGCATCCTATAGCA+AGG | + | chr5_3:62626159-62626178 | None:intergenic | 40.0% | |
| ATACTCTTCGGATACGTATC+GGG | + | chr5_3:62626455-62626474 | None:intergenic | 40.0% | |
| GATACTCTTCGGATACGTAT+CGG | + | chr5_3:62626456-62626475 | None:intergenic | 40.0% | |
| ACACAAGTATCCGTGTGTAT+CGG | + | chr5_3:62626535-62626554 | None:intergenic | 40.0% | |
| ATGCAATTGTTTGTGTGGTG+TGG | + | chr5_3:62626673-62626692 | None:intergenic | 40.0% | |
| !! | ATTTTTCCGTATCGGCGTAT+CGG | - | chr5_3:62626993-62627012 | Msa0823800:intron | 40.0% |
| TCAGCACTTGTGACAATGTT+TGG | + | chr5_3:62627170-62627189 | None:intergenic | 40.0% | |
| TTTAGACACCGTAGATGACA+CGG | + | chr5_3:62627442-62627461 | None:intergenic | 40.0% | |
| !!! | TCCGGTGTTTGGCTTTTATT+TGG | - | chr5_3:62627576-62627595 | Msa0823800:intron | 40.0% |
| CCCAAATAAAAGCCAAACAC+CGG | + | chr5_3:62627580-62627599 | None:intergenic | 40.0% | |
| !!! | CCGGTGTTTGGCTTTTATTT+GGG | - | chr5_3:62627577-62627596 | Msa0823800:intron | 40.0% |
| !! | TGGGATAATTTTGTTCGGTG+TGG | - | chr5_3:62627894-62627913 | Msa0823800:intron | 40.0% |
| !!! | GATAATTTTGTTCGGTGTGG+AGG | - | chr5_3:62627897-62627916 | Msa0823800:intron | 40.0% |
| ATAGTTGTAAGAACCCACCA+AGG | + | chr5_3:62628134-62628153 | None:intergenic | 40.0% | |
| TAGCCTGTTTGGTTAGGAAA+TGG | + | chr5_3:62628626-62628645 | None:intergenic | 40.0% | |
| CTAACCAAACAGGCTATTCA+GGG | - | chr5_3:62628630-62628649 | Msa0823800:intron | 40.0% | |
| TAACCAAACAGGCTATTCAG+GGG | - | chr5_3:62628631-62628650 | Msa0823800:intron | 40.0% | |
| ! | AGCCAGGCTTTTACATTTAG+TGG | - | chr5_3:62628879-62628898 | Msa0823800:CDS | 40.0% |
| AGCCACTAAATGTAAAAGCC+TGG | + | chr5_3:62628884-62628903 | None:intergenic | 40.0% | |
| !!! | AGTGGCTCTTTTGTTTTGGA+AGG | - | chr5_3:62628897-62628916 | Msa0823800:intron | 40.0% |
| AAGTGTAAAAGTGGCAGCTA+AGG | + | chr5_3:62629205-62629224 | None:intergenic | 40.0% | |
| CACCACCAAACTTAAAAGCT+TGG | + | chr5_3:62629299-62629318 | None:intergenic | 40.0% | |
| !! | GTGGTGTTACAGTGTTAGTA+GGG | - | chr5_3:62629313-62629332 | Msa0823800:intron | 40.0% |
| !! | TGGTGTTACAGTGTTAGTAG+GGG | - | chr5_3:62629314-62629333 | Msa0823800:intron | 40.0% |
| AACAGACACACACAAAAGAG+TGG | + | chr5_3:62629498-62629517 | None:intergenic | 40.0% | |
| ! | CAGGGACATTTTTCATCAAG+AGG | - | chr5_3:62629659-62629678 | Msa0823800:intron | 40.0% |
| AAGAGGCTTCCATTCAAACA+TGG | - | chr5_3:62629676-62629695 | Msa0823800:intron | 40.0% | |
| TGAACGCTTCCATGTTTGAA+TGG | + | chr5_3:62629688-62629707 | None:intergenic | 40.0% | |
| GTCATTCTTCTATACCATGC+TGG | + | chr5_3:62629995-62630014 | None:intergenic | 40.0% | |
| AATGACAATCCTTGGGAGTT+GGG | - | chr5_3:62630009-62630028 | Msa0823800:intron | 40.0% | |
| !!! | TTGTTTTGATGTATGGGAGC+AGG | - | chr5_3:62630467-62630486 | Msa0823800:intron | 40.0% |
| !!! | TGTTTTGATGTATGGGAGCA+GGG | - | chr5_3:62630468-62630487 | Msa0823800:intron | 40.0% |
| TCAACATTAACCTTGTCACC+AGG | + | chr5_3:62630494-62630513 | None:intergenic | 40.0% | |
| GTTTCTGTGAAGGATTTGGA+TGG | - | chr5_3:62630571-62630590 | Msa0823800:intron | 40.0% | |
| ! | GTTTTCCTTGCTGCTGTATT+AGG | - | chr5_3:62630641-62630660 | Msa0823800:intron | 40.0% |
| ! | ATGGCTTGTGGGAGTAAAAA+TGG | + | chr5_3:62630732-62630751 | None:intergenic | 40.0% |
| ! | GAATTCATGTGATGGCTTGT+GGG | + | chr5_3:62630743-62630762 | None:intergenic | 40.0% |
| AGAATTCATGTGATGGCTTG+TGG | + | chr5_3:62630744-62630763 | None:intergenic | 40.0% | |
| ACTCGTCTTTCTCTTTCCTT+AGG | + | chr5_3:62631063-62631082 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | - | chr5_3:62631466-62631485 | Msa0823800:intron | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | - | chr5_3:62631467-62631486 | Msa0823800:intron | 40.0% | |
| CAAATAATGCATACACCCTC+CGG | + | chr5_3:62631485-62631504 | None:intergenic | 40.0% | |
| ! | ATAGCAATGCACCATTGGTT+TGG | + | chr5_3:62631615-62631634 | None:intergenic | 40.0% |
| AGACAATAGCAATGCACCAT+TGG | + | chr5_3:62631620-62631639 | None:intergenic | 40.0% | |
| ! | AATGGTGCATTGCTATTGTC+TGG | - | chr5_3:62631619-62631638 | Msa0823800:intron | 40.0% |
| TACTATGACGTGTAGGACTT+GGG | + | chr5_3:62631701-62631720 | None:intergenic | 40.0% | |
| ATACACCTACTATGACGTGT+AGG | + | chr5_3:62631708-62631727 | None:intergenic | 40.0% | |
| TTGTTCAGAAAAAGTGGGGA+TGG | - | chr5_3:62631743-62631762 | Msa0823800:intron | 40.0% | |
| CATCTGCATACATATGCACT+TGG | - | chr5_3:62631766-62631785 | Msa0823800:intron | 40.0% | |
| TCTGCATACATATGCACTTG+GGG | - | chr5_3:62631768-62631787 | Msa0823800:intron | 40.0% | |
| GTCGAGTAACATGATAGACA+AGG | - | chr5_3:62631891-62631910 | Msa0823800:intron | 40.0% | |
| CGAGTAACATGATAGACAAG+GGG | - | chr5_3:62631893-62631912 | Msa0823800:intron | 40.0% | |
| GATGCTTTCGTTGAAAAGCA+TGG | - | chr5_3:62632059-62632078 | Msa0823800:intron | 40.0% | |
| GTCAAATTGGGACTTATGTC+TGG | - | chr5_3:62632083-62632102 | Msa0823800:intron | 40.0% | |
| AGGTGACTGAAGAAAACCTT+CGG | + | chr5_3:62632314-62632333 | None:intergenic | 40.0% | |
| CCGGAGGGAATAGTAAATAA+GGG | + | chr5_3:62632344-62632363 | None:intergenic | 40.0% | |
| ! | CCCTTATTTACTATTCCCTC+CGG | - | chr5_3:62632341-62632360 | Msa0823800:intron | 40.0% |
| ACCGGAGGGAATAGTAAATA+AGG | + | chr5_3:62632345-62632364 | None:intergenic | 40.0% | |
| TGCTAATTATAGTGACCGGA+GGG | + | chr5_3:62632359-62632378 | None:intergenic | 40.0% | |
| TTGCTAATTATAGTGACCGG+AGG | + | chr5_3:62632360-62632379 | None:intergenic | 40.0% | |
| !!! | TTTTTTTTGCTTGCCTACCC+AGG | - | chr5_3:62632659-62632678 | Msa0823800:intron | 40.0% |
| !!! | TTTTTTTGCTTGCCTACCCA+GGG | - | chr5_3:62632660-62632679 | Msa0823800:intron | 40.0% |
| TTTGCAAAGAAGGCTAATGC+TGG | - | chr5_3:62632753-62632772 | Msa0823800:intron | 40.0% | |
| !! | TGATATTGTAAGAGTGCCTC+CGG | + | chr5_3:62632802-62632821 | None:intergenic | 40.0% |
| AAAGGGCGGAATATTTGGAT+AGG | + | chr5_3:62633135-62633154 | None:intergenic | 40.0% | |
| AAGGAAAAGGGCGGAATATT+TGG | + | chr5_3:62633140-62633159 | None:intergenic | 40.0% | |
| !!! | CAGCTATTGTTTTTGGCAGT+CGG | - | chr5_3:62633264-62633283 | Msa0823800:intron | 40.0% |
| TTGGAGGAAATGTTGTTCCA+AGG | - | chr5_3:62633329-62633348 | Msa0823800:intron | 40.0% | |
| GTTAGAGCAATGTACATCAG+TGG | + | chr5_3:62633355-62633374 | None:intergenic | 40.0% | |
| !! | AGGCAGTGTTCTTTTTGAGA+CGG | - | chr5_3:62633404-62633423 | Msa0823800:intron | 40.0% |
| TTGTTTGGGCCTTGAATTTG+CGG | - | chr5_3:62633542-62633561 | Msa0823800:intron | 40.0% | |
| !! | ACCTATCCCTCTAAAACTAG+AGG | - | chr5_3:62633649-62633668 | Msa0823800:intron | 40.0% |
| !! | CCTATCCCTCTAAAACTAGA+GGG | - | chr5_3:62633650-62633669 | Msa0823800:intron | 40.0% |
| !!! | TGTGACCCTCTAGTTTTAGA+GGG | + | chr5_3:62633658-62633677 | None:intergenic | 40.0% |
| !!! | TTGTGACCCTCTAGTTTTAG+AGG | + | chr5_3:62633659-62633678 | None:intergenic | 40.0% |
| AATGTAACGAAACCATGGCA+TGG | - | chr5_3:62633852-62633871 | Msa0823800:five_prime_UTR | 40.0% | |
| AAAAATTGGGTTCCATGCCA+TGG | + | chr5_3:62633867-62633886 | None:intergenic | 40.0% | |
| AAGAAGGCAGAGGAAGAGAT+CGG | + | chr5_3:62625399-62625418 | None:intergenic | 45.0% | |
| CAGTTGCTGAAAATTCGGTC+CGG | - | chr5_3:62625793-62625812 | Msa0823800:CDS | 45.0% | |
| GGAAGAAACTCTAGTTGTGC+CGG | + | chr5_3:62625815-62625834 | None:intergenic | 45.0% | |
| !! | GATACGTATCGGGAAGTATC+AGG | + | chr5_3:62626445-62626464 | None:intergenic | 45.0% |
| CACAAGTATCCGTGTGTATC+GGG | + | chr5_3:62626534-62626553 | None:intergenic | 45.0% | |
| TTGTTTGTGTGGTGTGGTGT+GGG | + | chr5_3:62626667-62626686 | None:intergenic | 45.0% | |
| ATTGTTTGTGTGGTGTGGTG+TGG | + | chr5_3:62626668-62626687 | None:intergenic | 45.0% | |
| ATGTTAATGTGCTACGAGCC+TGG | - | chr5_3:62626852-62626871 | Msa0823800:intron | 45.0% | |
| TCCGTATCGTATCTCGTATC+CGG | - | chr5_3:62627028-62627047 | Msa0823800:intron | 45.0% | |
| AATCCGTCTAAGCACAGTGT+AGG | - | chr5_3:62627386-62627405 | Msa0823800:intron | 45.0% | |
| CATCCTACACTGTGCTTAGA+CGG | + | chr5_3:62627392-62627411 | None:intergenic | 45.0% | |
| GAGCTATACCGTGTCATCTA+CGG | - | chr5_3:62627431-62627450 | Msa0823800:intron | 45.0% | |
| ! | GCAAGGACATCCCTTTTACT+TGG | - | chr5_3:62627653-62627672 | Msa0823800:intron | 45.0% |
| AGTGTCTGGTTAGCGAATGT+GGG | + | chr5_3:62627840-62627859 | None:intergenic | 45.0% | |
| TCTGTACTCTAAGCAGTGTC+TGG | + | chr5_3:62627854-62627873 | None:intergenic | 45.0% | |
| GAGATTGCATTAAGCTCAGG+AGG | - | chr5_3:62628169-62628188 | Msa0823800:CDS | 45.0% | |
| CATTAAGCTCAGGAGGATGT+GGG | - | chr5_3:62628176-62628195 | Msa0823800:CDS | 45.0% | |
| CCTGAATAGCCTGTTTGGTT+AGG | + | chr5_3:62628632-62628651 | None:intergenic | 45.0% | |
| CCTAACCAAACAGGCTATTC+AGG | - | chr5_3:62628629-62628648 | Msa0823800:intron | 45.0% | |
| TTCATTGTCGGATGATAGCC+AGG | - | chr5_3:62628863-62628882 | Msa0823800:CDS | 45.0% | |
| !! | GGTGGTGTTACAGTGTTAGT+AGG | - | chr5_3:62629312-62629331 | Msa0823800:intron | 45.0% |
| ! | TACAGTGTTAGTAGGGGCAT+TGG | - | chr5_3:62629320-62629339 | Msa0823800:intron | 45.0% |
| GAATGACAATCCTTGGGAGT+TGG | - | chr5_3:62630008-62630027 | Msa0823800:intron | 45.0% | |
| TGATGTTGTTGTCCCTCCAT+TGG | - | chr5_3:62630320-62630339 | Msa0823800:intron | 45.0% | |
| TGTCACCTAATACAGCAGCA+AGG | + | chr5_3:62630649-62630668 | None:intergenic | 45.0% | |
| TGCAGCTTCTAGCCAATGAA+GGG | - | chr5_3:62630818-62630837 | Msa0823800:intron | 45.0% | |
| TTAGGAGCTTTCTTCTCCTC+CGG | + | chr5_3:62630970-62630989 | None:intergenic | 45.0% | |
| CGTCTTTCTCTTTCCTTAGG+AGG | + | chr5_3:62631060-62631079 | None:intergenic | 45.0% | |
| AGGTTCCTATGACAAGGCTT+CGG | - | chr5_3:62631160-62631179 | Msa0823800:intron | 45.0% | |
| CTATGACAAGGCTTCGGAAA+CGG | - | chr5_3:62631166-62631185 | Msa0823800:intron | 45.0% | |
| TATGACAAGGCTTCGGAAAC+GGG | - | chr5_3:62631167-62631186 | Msa0823800:intron | 45.0% | |
| ! | TAGTGACCTGAGGGTGTAAT+AGG | + | chr5_3:62631341-62631360 | None:intergenic | 45.0% |
| CTACTATGACGTGTAGGACT+TGG | + | chr5_3:62631702-62631721 | None:intergenic | 45.0% | |
| CAAGTCCTACACGTCATAGT+AGG | - | chr5_3:62631700-62631719 | Msa0823800:intron | 45.0% | |
| !! | GAAGCTCCGTGCTGATTATA+AGG | - | chr5_3:62632037-62632056 | Msa0823800:intron | 45.0% |
| TTATCCGCATTTCGGATGAC+AGG | + | chr5_3:62632696-62632715 | None:intergenic | 45.0% | |
| !! | CTGAGGTGGGTTGATAATAG+GGG | + | chr5_3:62632856-62632875 | None:intergenic | 45.0% |
| !! | CCTGAGGTGGGTTGATAATA+GGG | + | chr5_3:62632857-62632876 | None:intergenic | 45.0% |
| !! | ACCTGAGGTGGGTTGATAAT+AGG | + | chr5_3:62632858-62632877 | None:intergenic | 45.0% |
| AGAACATGCAAACCTGAGGT+GGG | + | chr5_3:62632869-62632888 | None:intergenic | 45.0% | |
| TAGCAGAACATGCAAACCTG+AGG | + | chr5_3:62632873-62632892 | None:intergenic | 45.0% | |
| AAGAAGTAGGACGAACCATC+TGG | - | chr5_3:62633005-62633024 | Msa0823800:intron | 45.0% | |
| AGTTACTAGTGGCATGCATC+TGG | + | chr5_3:62633062-62633081 | None:intergenic | 45.0% | |
| ACTACTGGTAAGGAAAAGGG+CGG | + | chr5_3:62633149-62633168 | None:intergenic | 45.0% | |
| !! | TTTTTGGCAGTCGGCAATCT+TGG | - | chr5_3:62633273-62633292 | Msa0823800:intron | 45.0% |
| ! | TTTTGGCAGTCGGCAATCTT+GGG | - | chr5_3:62633274-62633293 | Msa0823800:intron | 45.0% |
| AACATTTCCTCCAACAACCG+CGG | + | chr5_3:62633323-62633342 | None:intergenic | 45.0% | |
| !!! | CCCTCTAGTTTTAGAGGGAT+AGG | + | chr5_3:62633653-62633672 | None:intergenic | 45.0% |
| !! | TATAAAAAAATTACATTTAT+TGG | - | chr5_3:62627988-62628007 | Msa0823800:CDS | 5.0% |
| !! | GATCGAGTTGAAGAAGGCAG+AGG | + | chr5_3:62625409-62625428 | None:intergenic | 50.0% |
| GTTAGACGAAGGGTTGCTTC+TGG | - | chr5_3:62625627-62625646 | Msa0823800:three_prime_UTR | 50.0% | |
| ! | TGCTTCTGGAGGCACATCTT+CGG | - | chr5_3:62625641-62625660 | Msa0823800:three_prime_UTR | 50.0% |
| AAATGGCTCACCTCACACAG+TGG | + | chr5_3:62625948-62625967 | None:intergenic | 50.0% | |
| AGTTCGGCAAGATTAGCGAG+TGG | + | chr5_3:62626216-62626235 | None:intergenic | 50.0% | |
| !! | GGGAAGTATCAGGCAGGTAT+CGG | + | chr5_3:62626435-62626454 | None:intergenic | 50.0% |
| ! | CGGGACGTATCGGAAAGTAT+CGG | + | chr5_3:62626515-62626534 | None:intergenic | 50.0% |
| AAAGTGGACGGTGACCACTT+TGG | + | chr5_3:62626735-62626754 | None:intergenic | 50.0% | |
| AAAGTGGTCACCGTCCACTT+TGG | - | chr5_3:62626734-62626753 | Msa0823800:intron | 50.0% | |
| CACCGTCGAAGTCTTGGTAA+CGG | - | chr5_3:62626758-62626777 | Msa0823800:intron | 50.0% | |
| GTCCGTTACCAAGACTTCGA+CGG | + | chr5_3:62626763-62626782 | None:intergenic | 50.0% | |
| !! | GTCTTGGTAACGGACGACTT+TGG | - | chr5_3:62626768-62626787 | Msa0823800:intron | 50.0% |
| CCCGGATACGAGATACGATA+CGG | + | chr5_3:62627032-62627051 | None:intergenic | 50.0% | |
| CCGTATCGTATCTCGTATCC+GGG | - | chr5_3:62627029-62627048 | Msa0823800:intron | 50.0% | |
| AACATCTAGTCTGGGAAGCC+CGG | + | chr5_3:62627050-62627069 | None:intergenic | 50.0% | |
| ! | TGTCTGTGACTGGTTCACTC+CGG | - | chr5_3:62627558-62627577 | Msa0823800:intron | 50.0% |
| CAGTGTCTGGTTAGCGAATG+TGG | + | chr5_3:62627841-62627860 | None:intergenic | 50.0% | |
| GCATTAAGCTCAGGAGGATG+TGG | - | chr5_3:62628175-62628194 | Msa0823800:CDS | 50.0% | |
| CTTCCCCTGAATAGCCTGTT+TGG | + | chr5_3:62628637-62628656 | None:intergenic | 50.0% | |
| CAAACAGGCTATTCAGGGGA+AGG | - | chr5_3:62628635-62628654 | Msa0823800:intron | 50.0% | |
| ACACACAAAAGAGTGGACGC+AGG | + | chr5_3:62629491-62629510 | None:intergenic | 50.0% | |
| ATCCTTGGGAGTTGGGTGAT+TGG | - | chr5_3:62630016-62630035 | Msa0823800:intron | 50.0% | |
| ! | CGATGGATTCAGCCAATGGA+GGG | + | chr5_3:62630335-62630354 | None:intergenic | 50.0% |
| ! | TCGATGGATTCAGCCAATGG+AGG | + | chr5_3:62630336-62630355 | None:intergenic | 50.0% |
| ! | TCCATTGGCTGAATCCATCG+AGG | - | chr5_3:62630335-62630354 | Msa0823800:intron | 50.0% |
| ! | TCCTCGATGGATTCAGCCAA+TGG | + | chr5_3:62630339-62630358 | None:intergenic | 50.0% |
| TTGGCTGAATCCATCGAGGA+TGG | - | chr5_3:62630339-62630358 | Msa0823800:intron | 50.0% | |
| TGGCTGAATCCATCGAGGAT+GGG | - | chr5_3:62630340-62630359 | Msa0823800:intron | 50.0% | |
| GATGTTCCAAGTCCTGAGTC+AGG | - | chr5_3:62630672-62630691 | Msa0823800:intron | 50.0% | |
| ATCACACCTGACTCAGGACT+TGG | + | chr5_3:62630681-62630700 | None:intergenic | 50.0% | |
| TTCAGGATCACACCTGACTC+AGG | + | chr5_3:62630687-62630706 | None:intergenic | 50.0% | |
| TGAGTCAGGTGTGATCCTGA+AGG | - | chr5_3:62630686-62630705 | Msa0823800:intron | 50.0% | |
| GTGCAGCTTCTAGCCAATGA+AGG | - | chr5_3:62630817-62630836 | Msa0823800:intron | 50.0% | |
| GCAGCTTCTAGCCAATGAAG+GGG | - | chr5_3:62630819-62630838 | Msa0823800:intron | 50.0% | |
| CGCAACAGTATCCCCTTCAT+TGG | + | chr5_3:62630833-62630852 | None:intergenic | 50.0% | |
| AGTCTCAGATGGTGCAACGT+GGG | + | chr5_3:62630902-62630921 | None:intergenic | 50.0% | |
| TTCTCAGGTGCAGTCTCAGA+TGG | + | chr5_3:62630913-62630932 | None:intergenic | 50.0% | |
| CTTTGTGGAGCAGGTGCTTT+AGG | + | chr5_3:62631015-62631034 | None:intergenic | 50.0% | |
| CTTTCCTTAGGAGGAAGCTG+TGG | + | chr5_3:62631051-62631070 | None:intergenic | 50.0% | |
| ! | CGTTTCCGAAGCCTTGTCAT+AGG | + | chr5_3:62631168-62631187 | None:intergenic | 50.0% |
| !! | TTCGGAAACGGGTTGCTCAA+CGG | - | chr5_3:62631178-62631197 | Msa0823800:intron | 50.0% |
| GTTTGGCAGGCGCATCATAT+GGG | + | chr5_3:62631598-62631617 | None:intergenic | 50.0% | |
| !! | CAATGCACCATTGGTTTGGC+AGG | + | chr5_3:62631611-62631630 | None:intergenic | 50.0% |
| CATAGCTGTTGGAACTCCGA+AGG | - | chr5_3:62632295-62632314 | Msa0823800:intron | 50.0% | |
| TGTGCCTGTCATCCGAAATG+CGG | - | chr5_3:62632689-62632708 | Msa0823800:intron | 50.0% | |
| TCAATTGATGAGATGGCCGG+AGG | - | chr5_3:62632783-62632802 | Msa0823800:intron | 50.0% | |
| CCCTATTATCAACCCACCTC+AGG | - | chr5_3:62632854-62632873 | Msa0823800:intron | 50.0% | |
| CAGAACATGCAAACCTGAGG+TGG | + | chr5_3:62632870-62632889 | None:intergenic | 50.0% | |
| ACATTTCCTCCAACAACCGC+GGG | + | chr5_3:62633322-62633341 | None:intergenic | 50.0% | |
| GCAATGTACATCAGTGGCCT+TGG | + | chr5_3:62633349-62633368 | None:intergenic | 50.0% | |
| GAGACGGATCAAAGATACCG+TGG | - | chr5_3:62633420-62633439 | Msa0823800:intron | 50.0% | |
| ACGGATCAAAGATACCGTGG+AGG | - | chr5_3:62633423-62633442 | Msa0823800:intron | 50.0% | |
| TCGATCTTCCTTCCCCTCTC+AGG | - | chr5_3:62625423-62625442 | Msa0823800:three_prime_UTR | 55.0% | |
| CAGGTTAACCTGAGAGGGGA+AGG | + | chr5_3:62625434-62625453 | None:intergenic | 55.0% | |
| AGACGAAGGGTTGCTTCTGG+AGG | - | chr5_3:62625630-62625649 | Msa0823800:three_prime_UTR | 55.0% | |
| TGCAGGATACGCAGGGGATA+CGG | + | chr5_3:62626412-62626431 | None:intergenic | 55.0% | |
| TATCGGTGCAGGATACGCAG+GGG | + | chr5_3:62626418-62626437 | None:intergenic | 55.0% | |
| ! | GTATCGGTGCAGGATACGCA+GGG | + | chr5_3:62626419-62626438 | None:intergenic | 55.0% |
| !! | TATCAGGCAGGTATCGGTGC+AGG | + | chr5_3:62626429-62626448 | None:intergenic | 55.0% |
| !! | CGTATCGGGAAGTATCAGGC+AGG | + | chr5_3:62626441-62626460 | None:intergenic | 55.0% |
| CCGTGTGTATCGGGACGTAT+CGG | + | chr5_3:62626525-62626544 | None:intergenic | 55.0% | |
| CCGATACGTCCCGATACACA+CGG | - | chr5_3:62626522-62626541 | Msa0823800:intron | 55.0% | |
| TGGTGTGGTGTGGGTCGTAT+TGG | + | chr5_3:62626658-62626677 | None:intergenic | 55.0% | |
| TTTGGCCACCGTCGAAGTCT+TGG | - | chr5_3:62626752-62626771 | Msa0823800:intron | 55.0% | |
| CGTTACCAAGACTTCGACGG+TGG | + | chr5_3:62626760-62626779 | None:intergenic | 55.0% | |
| ! | ACTGCACCGATACGCCGATA+CGG | + | chr5_3:62627002-62627021 | None:intergenic | 55.0% |
| ! | GACTGGTTCACTCCGGTGTT+TGG | - | chr5_3:62627565-62627584 | Msa0823800:intron | 55.0% |
| GACCAATCACCCAACTCCCA+AGG | + | chr5_3:62630021-62630040 | None:intergenic | 55.0% | |
| TGCTAGAGTCCCATCCTCGA+TGG | + | chr5_3:62630352-62630371 | None:intergenic | 55.0% | |
| CAGTCTCAGATGGTGCAACG+TGG | + | chr5_3:62630903-62630922 | None:intergenic | 55.0% | |
| GGCTTAGGAGCAGGTTTCTC+AGG | + | chr5_3:62630928-62630947 | None:intergenic | 55.0% | |
| ! | GTTGGAGAGCTTTGTGGAGC+AGG | + | chr5_3:62631024-62631043 | None:intergenic | 55.0% |
| GGCTCAGTTGGAGAGCTTTG+TGG | + | chr5_3:62631030-62631049 | None:intergenic | 55.0% | |
| TGAGCCACAGCTTCCTCCTA+AGG | - | chr5_3:62631044-62631063 | Msa0823800:intron | 55.0% | |
| ! | ACGGGTTGCTCAACGGTTGA+AGG | - | chr5_3:62631185-62631204 | Msa0823800:intron | 55.0% |
| GGTTTGGCAGGCGCATCATA+TGG | + | chr5_3:62631599-62631618 | None:intergenic | 55.0% | |
| TGATGCGCCTGCCAAACCAA+TGG | - | chr5_3:62631601-62631620 | Msa0823800:intron | 55.0% | |
| GACAGGCACAACAAGTCCCT+GGG | + | chr5_3:62632679-62632698 | None:intergenic | 55.0% | |
| TGACAGGCACAACAAGTCCC+TGG | + | chr5_3:62632680-62632699 | None:intergenic | 55.0% | |
| TTCAATTGTGAGCCGTCCCG+CGG | - | chr5_3:62633303-62633322 | Msa0823800:intron | 55.0% | |
| TGTCGAGCAAAAGCCTGCGA+GGG | + | chr5_3:62633450-62633469 | None:intergenic | 55.0% | |
| ATGTCGAGCAAAAGCCTGCG+AGG | + | chr5_3:62633451-62633470 | None:intergenic | 55.0% | |
| ACTACGCGAGCCACTGTGTG+AGG | - | chr5_3:62625935-62625954 | Msa0823800:intron | 60.0% | |
| !! | GGTATCGGTGCAGGATACGC+AGG | + | chr5_3:62626420-62626439 | None:intergenic | 60.0% |
| TCGACGGTGGCCAAAGTGGA+CGG | + | chr5_3:62626747-62626766 | None:intergenic | 60.0% | |
| GACTTCGACGGTGGCCAAAG+TGG | + | chr5_3:62626751-62626770 | None:intergenic | 60.0% | |
| TGATGTATGGGAGCAGGGCC+TGG | - | chr5_3:62630473-62630492 | Msa0823800:intron | 60.0% | |
| GAAGGGGATACTGTTGCGCC+AGG | - | chr5_3:62630835-62630854 | Msa0823800:intron | 60.0% | |
| !! | TTTGGGGCTGGCTTAGGAGC+AGG | + | chr5_3:62630937-62630956 | None:intergenic | 60.0% |
| TGCTCCTAAGCCAGCCCCAA+AGG | - | chr5_3:62630936-62630955 | Msa0823800:intron | 60.0% | |
| !! | CTAGCCTTTGGGGCTGGCTT+AGG | + | chr5_3:62630943-62630962 | None:intergenic | 60.0% |
| AGCCCCAAAGGCTAGTGAGC+CGG | - | chr5_3:62630948-62630967 | Msa0823800:intron | 60.0% | |
| !! | CTCCGGCTCACTAGCCTTTG+GGG | + | chr5_3:62630953-62630972 | None:intergenic | 60.0% |
| !! | CCTCCGGCTCACTAGCCTTT+GGG | + | chr5_3:62630954-62630973 | None:intergenic | 60.0% |
| !! | TCCTCCGGCTCACTAGCCTT+TGG | + | chr5_3:62630955-62630974 | None:intergenic | 60.0% |
| GGAGGAAGCTGTGGCTCAGT+TGG | + | chr5_3:62631042-62631061 | None:intergenic | 60.0% | |
| GGCACAACAAGTCCCTGGGT+AGG | + | chr5_3:62632675-62632694 | None:intergenic | 60.0% | |
| TTCCTCCAACAACCGCGGGA+CGG | + | chr5_3:62633318-62633337 | None:intergenic | 60.0% | |
| !! | GGCTCACTAGCCTTTGGGGC+TGG | + | chr5_3:62630949-62630968 | None:intergenic | 65.0% |
| CCCAAAGGCTAGTGAGCCGG+AGG | - | chr5_3:62630951-62630970 | Msa0823800:intron | 65.0% | |
| ATACCGTGGAGGACCCTCGC+AGG | - | chr5_3:62633434-62633453 | Msa0823800:intron | 65.0% | |
| AAGCCTGCGAGGGTCCTCCA+CGG | + | chr5_3:62633440-62633459 | None:intergenic | 65.0% | |
| GGGAGCAGGGCCTGGTGACA+AGG | - | chr5_3:62630481-62630500 | Msa0823800:intron | 70.0% | |
| GTGAGCCGTCCCGCGGTTGT+TGG | - | chr5_3:62633310-62633329 | Msa0823800:intron | 70.0% | |
| AGCCGTCCCGCGGTTGTTGG+AGG | - | chr5_3:62633313-62633332 | Msa0823800:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 62625315 | 62633895 | 62625315 | ID=Msa0823800;Name=Msa0823800 |
| chr5_3 | mRNA | 62625315 | 62633895 | 62625315 | ID=Msa0823800-mRNA-1;Parent=Msa0823800;Name=Msa0823800-mRNA-1;_AED=0.08;_eAED=0.08;_QI=154|0.8|0.81|0.93|0.93|0.87|16|421|494 |
| chr5_3 | exon | 62625315 | 62625927 | 62625315 | ID=Msa0823800-mRNA-1:exon:19522;Parent=Msa0823800-mRNA-1 |
| chr5_3 | exon | 62626335 | 62626529 | 62626335 | ID=Msa0823800-mRNA-1:exon:19521;Parent=Msa0823800-mRNA-1 |
| chr5_3 | exon | 62626894 | 62627004 | 62626894 | ID=Msa0823800-mRNA-1:exon:19520;Parent=Msa0823800-mRNA-1 |
| chr5_3 | exon | 62627095 | 62627185 | 62627095 | ID=Msa0823800-mRNA-1:exon:19519;Parent=Msa0823800-mRNA-1 |
| chr5_3 | exon | 62627954 | 62628048 | 62627954 | ID=Msa0823800-mRNA-1:exon:19518;Parent=Msa0823800-mRNA-1 |
| chr5_3 | exon | 62628130 | 62628387 | 62628130 | ID=Msa0823800-mRNA-1:exon:19517;Parent=Msa0823800-mRNA-1 |
| chr5_3 | exon | 62628503 | 62628547 | 62628503 | ID=Msa0823800-mRNA-1:exon:19516;Parent=Msa0823800-mRNA-1 |
| chr5_3 | exon | 62628666 | 62628721 | 62628666 | ID=Msa0823800-mRNA-1:exon:19515;Parent=Msa0823800-mRNA-1 |
| chr5_3 | exon | 62628826 | 62628900 | 62628826 | ID=Msa0823800-mRNA-1:exon:19514;Parent=Msa0823800-mRNA-1 |
| chr5_3 | exon | 62629487 | 62629581 | 62629487 | ID=Msa0823800-mRNA-1:exon:19513;Parent=Msa0823800-mRNA-1 |
| chr5_3 | exon | 62630851 | 62630878 | 62630851 | ID=Msa0823800-mRNA-1:exon:19512;Parent=Msa0823800-mRNA-1 |
| chr5_3 | exon | 62630981 | 62631040 | 62630981 | ID=Msa0823800-mRNA-1:exon:19511;Parent=Msa0823800-mRNA-1 |
| chr5_3 | exon | 62632421 | 62632502 | 62632421 | ID=Msa0823800-mRNA-1:exon:19510;Parent=Msa0823800-mRNA-1 |
| chr5_3 | exon | 62633361 | 62633414 | 62633361 | ID=Msa0823800-mRNA-1:exon:19509;Parent=Msa0823800-mRNA-1 |
| chr5_3 | exon | 62633548 | 62633619 | 62633548 | ID=Msa0823800-mRNA-1:exon:19508;Parent=Msa0823800-mRNA-1 |
| chr5_3 | exon | 62633766 | 62633895 | 62633766 | ID=Msa0823800-mRNA-1:exon:19507;Parent=Msa0823800-mRNA-1 |
| chr5_3 | five_prime_UTR | 62633766 | 62633895 | 62633766 | ID=Msa0823800-mRNA-1:five_prime_utr;Parent=Msa0823800-mRNA-1 |
| chr5_3 | five_prime_UTR | 62633596 | 62633619 | 62633596 | ID=Msa0823800-mRNA-1:five_prime_utr;Parent=Msa0823800-mRNA-1 |
| chr5_3 | CDS | 62633548 | 62633595 | 62633548 | ID=Msa0823800-mRNA-1:cds;Parent=Msa0823800-mRNA-1 |
| chr5_3 | CDS | 62633361 | 62633414 | 62633361 | ID=Msa0823800-mRNA-1:cds;Parent=Msa0823800-mRNA-1 |
| chr5_3 | CDS | 62632421 | 62632502 | 62632421 | ID=Msa0823800-mRNA-1:cds;Parent=Msa0823800-mRNA-1 |
| chr5_3 | CDS | 62630981 | 62631040 | 62630981 | ID=Msa0823800-mRNA-1:cds;Parent=Msa0823800-mRNA-1 |
| chr5_3 | CDS | 62630851 | 62630878 | 62630851 | ID=Msa0823800-mRNA-1:cds;Parent=Msa0823800-mRNA-1 |
| chr5_3 | CDS | 62629487 | 62629581 | 62629487 | ID=Msa0823800-mRNA-1:cds;Parent=Msa0823800-mRNA-1 |
| chr5_3 | CDS | 62628826 | 62628900 | 62628826 | ID=Msa0823800-mRNA-1:cds;Parent=Msa0823800-mRNA-1 |
| chr5_3 | CDS | 62628666 | 62628721 | 62628666 | ID=Msa0823800-mRNA-1:cds;Parent=Msa0823800-mRNA-1 |
| chr5_3 | CDS | 62628503 | 62628547 | 62628503 | ID=Msa0823800-mRNA-1:cds;Parent=Msa0823800-mRNA-1 |
| chr5_3 | CDS | 62628130 | 62628387 | 62628130 | ID=Msa0823800-mRNA-1:cds;Parent=Msa0823800-mRNA-1 |
| chr5_3 | CDS | 62627954 | 62628048 | 62627954 | ID=Msa0823800-mRNA-1:cds;Parent=Msa0823800-mRNA-1 |
| chr5_3 | CDS | 62627095 | 62627185 | 62627095 | ID=Msa0823800-mRNA-1:cds;Parent=Msa0823800-mRNA-1 |
| chr5_3 | CDS | 62626894 | 62627004 | 62626894 | ID=Msa0823800-mRNA-1:cds;Parent=Msa0823800-mRNA-1 |
| chr5_3 | CDS | 62626335 | 62626529 | 62626335 | ID=Msa0823800-mRNA-1:cds;Parent=Msa0823800-mRNA-1 |
| chr5_3 | CDS | 62625736 | 62625927 | 62625736 | ID=Msa0823800-mRNA-1:cds;Parent=Msa0823800-mRNA-1 |
| chr5_3 | three_prime_UTR | 62625315 | 62625735 | 62625315 | ID=Msa0823800-mRNA-1:three_prime_utr;Parent=Msa0823800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
