Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0823830 | XP_003617617.1 | 89.869 | 918 | 29 | 4 | 1 | 918 | 1 | 854 | 0.0 | 1628 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0823830 | sp|Q12872|SFSWA_HUMAN | 40.476 | 84 | 44 | 2 | 198 | 281 | 203 | 280 | 1.19e-11 | 72.8 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0823830 | G7K8M3 | 89.869 | 918 | 29 | 4 | 1 | 918 | 1 | 854 | 0.0 | 1628 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0779690 | Msa0823830 | 0.828320 | 9.601070e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0823830 | MtrunA17_Chr5g0444691 | 96.322 | 707 | 18 | 2 | 212 | 918 | 1 | 699 | 0.0 | 1352 |
| Msa0823830 | MtrunA17_Chr5g0444681 | 95.745 | 141 | 6 | 0 | 1 | 141 | 1 | 141 | 2.10e-91 | 285 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0823830 | AT5G55100.2 | 40.645 | 930 | 373 | 26 | 1 | 898 | 1 | 783 | 3.67e-165 | 504 |
| Msa0823830 | AT5G55100.1 | 40.645 | 930 | 373 | 26 | 1 | 898 | 1 | 783 | 6.28e-165 | 503 |
| Msa0823830 | AT5G55100.7 | 37.881 | 689 | 308 | 21 | 239 | 898 | 1 | 598 | 8.46e-96 | 316 |
| Msa0823830 | AT5G55100.4 | 37.881 | 689 | 308 | 21 | 239 | 898 | 1 | 598 | 8.46e-96 | 316 |
| Msa0823830 | AT5G55100.8 | 37.881 | 689 | 308 | 21 | 239 | 898 | 1 | 598 | 8.46e-96 | 316 |
| Msa0823830 | AT5G55100.9 | 37.881 | 689 | 308 | 21 | 239 | 898 | 1 | 598 | 8.46e-96 | 316 |
| Msa0823830 | AT5G55100.12 | 37.881 | 689 | 308 | 21 | 239 | 898 | 1 | 598 | 8.46e-96 | 316 |
| Msa0823830 | AT5G55100.10 | 37.881 | 689 | 308 | 21 | 239 | 898 | 1 | 598 | 9.14e-96 | 315 |
| Msa0823830 | AT5G55100.3 | 37.881 | 689 | 308 | 21 | 239 | 898 | 1 | 598 | 9.14e-96 | 315 |
| Msa0823830 | AT5G55100.5 | 37.881 | 689 | 308 | 21 | 239 | 898 | 1 | 598 | 9.14e-96 | 315 |
| Msa0823830 | AT5G55100.6 | 37.881 | 689 | 308 | 21 | 239 | 898 | 1 | 598 | 9.14e-96 | 315 |
| Msa0823830 | AT5G55100.11 | 37.881 | 689 | 308 | 21 | 239 | 898 | 1 | 598 | 9.14e-96 | 315 |
Find 221 sgRNAs with CRISPR-Local
Find 435 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCAACATGGCTCTAATTT+TGG | 0.118147 | 5_3:-62678367 | None:intergenic |
| TTCCTCCTCTTCATGTTTAC+TGG | 0.123621 | 5_3:-62677683 | None:intergenic |
| CCACCGAGCTCTGGACTTTC+AGG | 0.131202 | 5_3:+62677460 | Msa0823830:CDS |
| CATTTGGCTTTATTATTTAT+TGG | 0.175722 | 5_3:+62678475 | Msa0823830:three_prime_UTR |
| CTATACCTCTTGTGAGAAAA+TGG | 0.179390 | 5_3:+62675331 | Msa0823830:CDS |
| AGATGACTACTGGCAATTTA+AGG | 0.184464 | 5_3:+62676978 | Msa0823830:CDS |
| TCATCTTGAATTTCTCTTTC+CGG | 0.219255 | 5_3:-62676961 | None:intergenic |
| ACAGGAGTTGCCTCAGATTC+AGG | 0.248437 | 5_3:+62676089 | Msa0823830:CDS |
| AGTTTGAGATTGGCTGTCTT+TGG | 0.250807 | 5_3:-62677023 | None:intergenic |
| TCTTTGCTTGGATCTGTCTA+TGG | 0.271680 | 5_3:+62675819 | Msa0823830:CDS |
| GATCCGCTGGAGTGTGCTTC+TGG | 0.286817 | 5_3:-62676904 | None:intergenic |
| TGAGTCTGTTCTTGCTGAAC+AGG | 0.291601 | 5_3:+62676250 | Msa0823830:CDS |
| CAAGGAGATAATCCAACATT+TGG | 0.295832 | 5_3:+62675651 | Msa0823830:CDS |
| AGAAATGCTTCCATCCTTCT+TGG | 0.299556 | 5_3:-62675973 | None:intergenic |
| GTTTGTTTAGATAATGATTC+AGG | 0.315306 | 5_3:+62674904 | Msa0823830:intron |
| AAATTTGTAAAAGCAAAATT+AGG | 0.322634 | 5_3:+62678392 | Msa0823830:three_prime_UTR |
| GACTGATTCCGCTTTATAAC+AGG | 0.329088 | 5_3:-62676026 | None:intergenic |
| GCGAGGTTGGGCGGGCTAGC+AGG | 0.329386 | 5_3:+62678262 | Msa0823830:three_prime_UTR |
| CTATTCTTCAGGCAGCTACT+AGG | 0.346882 | 5_3:+62677077 | Msa0823830:CDS |
| AGATTATGAAGTAAGCTTTC+GGG | 0.351130 | 5_3:-62675042 | None:intergenic |
| AGAGGCAGAGTTGGAGGAGG+GGG | 0.351243 | 5_3:+62678209 | Msa0823830:CDS |
| CGATTAGAAGGCAGAAGAAA+TGG | 0.352536 | 5_3:-62676293 | None:intergenic |
| CTTTCGGGTACTGGAAAGTT+AGG | 0.352947 | 5_3:-62675027 | None:intergenic |
| AAGATTATGAAGTAAGCTTT+CGG | 0.353541 | 5_3:-62675043 | None:intergenic |
| ATCTGATGTAGCTTCTCGTT+TGG | 0.354189 | 5_3:-62675561 | None:intergenic |
| TCAGAAACATTAGTTACTTC+AGG | 0.356338 | 5_3:-62678333 | None:intergenic |
| TGAAGTAAGCTTTCGGGTAC+TGG | 0.356551 | 5_3:-62675036 | None:intergenic |
| CACCGGAAGCTCTCGTTGAT+TGG | 0.358199 | 5_3:+62672400 | Msa0823830:CDS |
| CGTTTGAGGCGAGGAGGAAT+TGG | 0.360029 | 5_3:-62672471 | None:intergenic |
| TCCATCAGGCATAAATCATT+TGG | 0.363850 | 5_3:+62678459 | Msa0823830:three_prime_UTR |
| GGGGCCGTGCAGGTGGGATT+AGG | 0.365876 | 5_3:+62675289 | Msa0823830:CDS |
| CTCTCAGAATAATTTCTGAT+TGG | 0.369800 | 5_3:-62675623 | None:intergenic |
| TCTGCAATAGCCTTGGCAAC+TGG | 0.375868 | 5_3:-62677268 | None:intergenic |
| GGCAGCCGCAGCTATTCTTC+AGG | 0.380880 | 5_3:+62677066 | Msa0823830:CDS |
| GCTGCTACTTCTGCATCATC+AGG | 0.381682 | 5_3:+62675918 | Msa0823830:CDS |
| TAGTTCAATCTTAGATGTAC+TGG | 0.382480 | 5_3:-62676147 | None:intergenic |
| TTCCAATCAACGAGAGCTTC+CGG | 0.387725 | 5_3:-62672402 | None:intergenic |
| CAGCTACTAGGGGTATTAAA+AGG | 0.387895 | 5_3:+62677089 | Msa0823830:CDS |
| GCCTCAGATTCAGGGTCTAA+TGG | 0.400930 | 5_3:+62676098 | Msa0823830:CDS |
| ATGCAGACAGGGACAGAAAC+AGG | 0.401823 | 5_3:+62677818 | Msa0823830:CDS |
| GTTTGAGATTGGCTGTCTTT+GGG | 0.407276 | 5_3:-62677022 | None:intergenic |
| TCTTTCCGGTCCATGTCATT+TGG | 0.407743 | 5_3:-62676947 | None:intergenic |
| TCTGTTGAGCCACCGAGCTC+TGG | 0.414659 | 5_3:+62677451 | Msa0823830:CDS |
| AGTGGTAATGGTCAAGGCCT+TGG | 0.420560 | 5_3:+62677142 | Msa0823830:CDS |
| CAAAATTAGAGCCATGTTGA+TGG | 0.424496 | 5_3:+62678368 | Msa0823830:three_prime_UTR |
| CCAACGACAAGTATTCTCAT+AGG | 0.427441 | 5_3:+62677869 | Msa0823830:CDS |
| TGTGGTTGTTCTTCATGAAT+CGG | 0.429815 | 5_3:-62672573 | None:intergenic |
| TCTGAGTTATCAGTATTGAA+TGG | 0.431503 | 5_3:-62677538 | None:intergenic |
| GATATTGAGAATTTGAGAAA+TGG | 0.431563 | 5_3:-62672244 | None:intergenic |
| TGATTATTCAAGTATATATG+AGG | 0.434149 | 5_3:+62675395 | Msa0823830:CDS |
| GGAGGTGCATTGTCTTTGCT+TGG | 0.435508 | 5_3:+62675807 | Msa0823830:CDS |
| GATTGGCTGTCTTTGGGAGT+TGG | 0.441345 | 5_3:-62677016 | None:intergenic |
| TCAGGTGCAGTGAGTTCATC+AGG | 0.441989 | 5_3:+62674922 | Msa0823830:CDS |
| TAAGTATGATATCGATTAGA+AGG | 0.444515 | 5_3:-62676305 | None:intergenic |
| CATATTTCTACTGTTCCATC+AGG | 0.444776 | 5_3:+62678445 | Msa0823830:three_prime_UTR |
| AGAGAGGCAGAGTTGGAGGA+GGG | 0.446411 | 5_3:+62678207 | Msa0823830:CDS |
| AAACGATGCAGGCTCAACTT+TGG | 0.446964 | 5_3:+62675752 | Msa0823830:CDS |
| AAGGAGATAATCCAACATTT+GGG | 0.448085 | 5_3:+62675652 | Msa0823830:CDS |
| TGCTGAAAGAGAGGCAGAGT+TGG | 0.452101 | 5_3:+62678200 | Msa0823830:CDS |
| TACGGATGAAGATGATGATC+AGG | 0.452690 | 5_3:-62675684 | None:intergenic |
| TGCTAACTGTAGTTTGAGAT+TGG | 0.455284 | 5_3:-62677033 | None:intergenic |
| TGACGGCAAACTCCGAGAGC+TGG | 0.456672 | 5_3:-62677185 | None:intergenic |
| CGAGGTTGGGCGGGCTAGCA+GGG | 0.456916 | 5_3:+62678263 | Msa0823830:three_prime_UTR |
| GAAATCTTGCTGGTAAAGAA+AGG | 0.460928 | 5_3:+62677500 | Msa0823830:CDS |
| GAGAAATTCAAGATGACTAC+TGG | 0.462625 | 5_3:+62676968 | Msa0823830:CDS |
| AGTAAGGCGTCAAGTGGTAA+TGG | 0.467860 | 5_3:+62677130 | Msa0823830:CDS |
| GAGAGGCAGAGTTGGAGGAG+GGG | 0.468764 | 5_3:+62678208 | Msa0823830:CDS |
| TGATGTAGCTTCTCGTTTGG+AGG | 0.470498 | 5_3:-62675558 | None:intergenic |
| ATCATGAAAAGGGGCCGTGC+AGG | 0.470529 | 5_3:+62675279 | Msa0823830:CDS |
| TCAGATGGAGGTTCAACAAC+AGG | 0.471995 | 5_3:-62676170 | None:intergenic |
| TAGCTTGTCCACTGAGACAA+AGG | 0.472838 | 5_3:+62674978 | Msa0823830:CDS |
| ATAATGAAAGGCGATCAAAA+AGG | 0.473517 | 5_3:+62677644 | Msa0823830:CDS |
| TATTCTTCAGGCAGCTACTA+GGG | 0.474651 | 5_3:+62677078 | Msa0823830:CDS |
| GAAGATGATGATCAGGCATC+AGG | 0.477942 | 5_3:-62675677 | None:intergenic |
| GCTGAGATTAGAAATCTTGC+TGG | 0.478163 | 5_3:+62677490 | Msa0823830:CDS |
| TCAATTTGCTGTGTTAGGTA+AGG | 0.478809 | 5_3:-62678525 | None:intergenic |
| GCCAAATGATTTATGCCTGA+TGG | 0.485061 | 5_3:-62678460 | None:intergenic |
| GATGATGAGTGCGGCGTTTG+AGG | 0.486900 | 5_3:-62672485 | None:intergenic |
| TATGCTTTGTCTTTCTGCTC+CGG | 0.487165 | 5_3:-62678164 | None:intergenic |
| GTCGGGACAGGGATGCAGAC+AGG | 0.487327 | 5_3:+62677806 | Msa0823830:CDS |
| TATACCTCTTGTGAGAAAAT+GGG | 0.488373 | 5_3:+62675332 | Msa0823830:CDS |
| AGTCAGGAGCTGGATCAAAC+AGG | 0.488581 | 5_3:+62675786 | Msa0823830:CDS |
| CCACATGTGCGTTTCTCTCA+AGG | 0.490342 | 5_3:-62675884 | None:intergenic |
| TTTGCCGTCATCTCAACTGC+AGG | 0.490397 | 5_3:+62677198 | Msa0823830:CDS |
| ATAACTATCTTTAAGTCAGA+TGG | 0.491088 | 5_3:-62676185 | None:intergenic |
| GATTAGAAGGCAGAAGAAAT+GGG | 0.493049 | 5_3:-62676292 | None:intergenic |
| CATGTTTACTGGATCTTGAA+CGG | 0.493859 | 5_3:-62677672 | None:intergenic |
| CAGGAGTTGCCTCAGATTCA+GGG | 0.496890 | 5_3:+62676090 | Msa0823830:CDS |
| TGCTTCTGTTCCAGTTGCCA+AGG | 0.499747 | 5_3:+62677258 | Msa0823830:CDS |
| TGAAAGAGAGGCAGAGTTGG+AGG | 0.499968 | 5_3:+62678203 | Msa0823830:CDS |
| AGTCACAAGTAAGCGAGGTT+GGG | 0.499970 | 5_3:+62678250 | Msa0823830:three_prime_UTR |
| ACCTACCAAATGACATGGAC+CGG | 0.500293 | 5_3:+62676942 | Msa0823830:CDS |
| GAATGTCTATGCTCATCATC+AGG | 0.500992 | 5_3:-62678060 | None:intergenic |
| GGCTCAACAGATAAAGCTCT+TGG | 0.504528 | 5_3:-62677439 | None:intergenic |
| GCAATGTTTGTCAGCAAACA+TGG | 0.506547 | 5_3:+62675597 | Msa0823830:CDS |
| AAGAGAGGCAGAGTTGGAGG+AGG | 0.507274 | 5_3:+62678206 | Msa0823830:CDS |
| AAGAAAATGAAGAAGATACA+AGG | 0.507909 | 5_3:+62677731 | Msa0823830:CDS |
| ACAAGTAAGCGAGGTTGGGC+GGG | 0.509025 | 5_3:+62678254 | Msa0823830:three_prime_UTR |
| CTTCACACAGAAGTCGGGAC+AGG | 0.510210 | 5_3:+62677794 | Msa0823830:CDS |
| TCAACAAGAAACCTAAAATA+CGG | 0.511809 | 5_3:-62675702 | None:intergenic |
| ATTCGATTCTAGAACTTCCA+TGG | 0.513541 | 5_3:+62672311 | Msa0823830:exon |
| AGAATACTTGTCGTTGGAGG+AGG | 0.513912 | 5_3:-62677863 | None:intergenic |
| GACGGCAAACTCCGAGAGCT+GGG | 0.517913 | 5_3:-62677184 | None:intergenic |
| AGTTCTTCAAACTGCTGAAG+AGG | 0.519694 | 5_3:+62676337 | Msa0823830:CDS |
| TCGATCTTCACACAGAAGTC+GGG | 0.520051 | 5_3:+62677789 | Msa0823830:CDS |
| ACAGTCTAAGTTACAAGGCA+AGG | 0.520076 | 5_3:+62676877 | Msa0823830:intron |
| AAATCTTGCTGGTAAAGAAA+GGG | 0.523325 | 5_3:+62677501 | Msa0823830:CDS |
| ATGAAAAGGGGCCGTGCAGG+TGG | 0.524205 | 5_3:+62675282 | Msa0823830:CDS |
| CGAGATAACGTTGATGATCA+AGG | 0.524860 | 5_3:-62672533 | None:intergenic |
| ATCTTCAGATGCAGCCAAGA+AGG | 0.525024 | 5_3:+62675959 | Msa0823830:CDS |
| AGAGGAGGAAGAAGAGGACG+AGG | 0.526595 | 5_3:+62677696 | Msa0823830:CDS |
| GTGGGAATTTGCCCAGCTCT+CGG | 0.527770 | 5_3:+62677173 | Msa0823830:CDS |
| TTTGGACAAGAATAGAAGTC+AGG | 0.527933 | 5_3:+62675770 | Msa0823830:CDS |
| ATCATTGTCCTTTGTCTCAG+TGG | 0.530661 | 5_3:-62674986 | None:intergenic |
| GGCTACTGCAGCAGCAGGTG+AGG | 0.530882 | 5_3:+62677297 | Msa0823830:CDS |
| GCTGAACAGGATCGTGCTCA+TGG | 0.531525 | 5_3:+62676263 | Msa0823830:CDS |
| AAAGTGGCTACTGCAGCAGC+AGG | 0.531946 | 5_3:+62677292 | Msa0823830:CDS |
| TGTTTACAGTCTAAGTTACA+AGG | 0.534524 | 5_3:+62676872 | Msa0823830:intron |
| AAGTCACAAGTAAGCGAGGT+TGG | 0.536520 | 5_3:+62678249 | Msa0823830:three_prime_UTR |
| CAAGAATAGAAGTCAGGAGC+TGG | 0.537742 | 5_3:+62675776 | Msa0823830:CDS |
| GGCATCAGGAACCCAAATGT+TGG | 0.539081 | 5_3:-62675663 | None:intergenic |
| TCCGGTCCATGTCATTTGGT+AGG | 0.541588 | 5_3:-62676943 | None:intergenic |
| ATGAGAATACTTGTCGTTGG+AGG | 0.542787 | 5_3:-62677866 | None:intergenic |
| CAAGGCCTTGGAAGTGATGG+TGG | 0.543308 | 5_3:+62677154 | Msa0823830:CDS |
| AACAGGATCGTGCTCATGGA+AGG | 0.546005 | 5_3:+62676267 | Msa0823830:CDS |
| TACGTGAATGTCTATGCTCA+TGG | 0.546992 | 5_3:-62678023 | None:intergenic |
| CACAAGTAAGCGAGGTTGGG+CGG | 0.550850 | 5_3:+62678253 | Msa0823830:three_prime_UTR |
| GAACTCATAGACGGATCCGC+TGG | 0.552448 | 5_3:-62676917 | None:intergenic |
| TCATGAATCGGAGAAGAAGA+AGG | 0.554871 | 5_3:-62672561 | None:intergenic |
| ATTAGGAGGTTACCTTCTTG+TGG | 0.557219 | 5_3:-62672591 | None:intergenic |
| TACTGCAGCAGCAGGTGAGG+CGG | 0.557382 | 5_3:+62677300 | Msa0823830:CDS |
| GACTCAAGGTAGCCATTCAC+AGG | 0.557545 | 5_3:+62675237 | Msa0823830:intron |
| ATGATCAAGGTCAGCTTCAA+CGG | 0.557580 | 5_3:-62672520 | None:intergenic |
| GATGTTCGTCATCTTCTCTC+CGG | 0.559574 | 5_3:+62672447 | Msa0823830:CDS |
| GAAAGACAAAGCATAAGAGC+AGG | 0.559960 | 5_3:+62678172 | Msa0823830:CDS |
| ATCCAGTAAACATGAAGAGG+AGG | 0.560824 | 5_3:+62677681 | Msa0823830:CDS |
| TCAGATGCAGCCAAGAAGGA+TGG | 0.564145 | 5_3:+62675963 | Msa0823830:CDS |
| CAACGACAAGTATTCTCATA+GGG | 0.564384 | 5_3:+62677870 | Msa0823830:CDS |
| CTTCTCGACGTCATCGTGGA+GGG | 0.566142 | 5_3:+62677986 | Msa0823830:CDS |
| AGTATTCTCATAGGGAGAGT+AGG | 0.570248 | 5_3:+62677878 | Msa0823830:CDS |
| ACATGAAGAGGAGGAAGAAG+AGG | 0.571410 | 5_3:+62677690 | Msa0823830:CDS |
| CCTATGAGAATACTTGTCGT+TGG | 0.572072 | 5_3:-62677869 | None:intergenic |
| CAGTCTAAGTTACAAGGCAA+GGG | 0.572361 | 5_3:+62676878 | Msa0823830:intron |
| CAGGTCTCATGCTGAAAGAG+AGG | 0.572770 | 5_3:+62678191 | Msa0823830:CDS |
| GAGGCGAGGAGGAATTGGAC+CGG | 0.573199 | 5_3:-62672466 | None:intergenic |
| CTGCTACTTCTGCATCATCA+GGG | 0.573669 | 5_3:+62675919 | Msa0823830:CDS |
| CTGAATTATTTAAGTCGACA+AGG | 0.575592 | 5_3:+62678295 | Msa0823830:three_prime_UTR |
| GCTGTTCGACGACGACGGCA+TGG | 0.578419 | 5_3:+62672362 | Msa0823830:CDS |
| CTATGGAAATGAAGAGGATG+AGG | 0.578886 | 5_3:+62675836 | Msa0823830:CDS |
| AATTCCCACCATCACTTCCA+AGG | 0.579918 | 5_3:-62677159 | None:intergenic |
| CCGTGCAGGTGGGATTAGGA+TGG | 0.580366 | 5_3:+62675293 | Msa0823830:CDS |
| CCTTGAGAGAAACGCACATG+TGG | 0.582859 | 5_3:+62675884 | Msa0823830:CDS |
| AAGATCCAGTAAACATGAAG+AGG | 0.583036 | 5_3:+62677678 | Msa0823830:CDS |
| GCATGACAGCTCCTCTGAGG+AGG | 0.584258 | 5_3:+62677900 | Msa0823830:CDS |
| TTAAGACAGCCATTTCAGCT+AGG | 0.584377 | 5_3:+62676060 | Msa0823830:CDS |
| ACCATTAGACCCTGAATCTG+AGG | 0.584397 | 5_3:-62676099 | None:intergenic |
| CATGACAGCTCCTCTGAGGA+GGG | 0.585607 | 5_3:+62677901 | Msa0823830:CDS |
| GTCGATCTTCACACAGAAGT+CGG | 0.586547 | 5_3:+62677788 | Msa0823830:CDS |
| TTTAGTCATATGTGCTTCAG+AGG | 0.590900 | 5_3:-62677326 | None:intergenic |
| GGCGGCGTTCGTGAACTCAC+CGG | 0.592580 | 5_3:+62672383 | Msa0823830:CDS |
| GCCAACGACTTCGAGATCCA+TGG | 0.595544 | 5_3:-62672328 | None:intergenic |
| CATGAAGAACAACCACAAGA+AGG | 0.597495 | 5_3:+62672579 | Msa0823830:CDS |
| AAGGACAATGATACTGACTC+TGG | 0.600997 | 5_3:+62674997 | Msa0823830:CDS |
| ACTGGCAATTTAAGGAAGGA+TGG | 0.601969 | 5_3:+62676986 | Msa0823830:CDS |
| GCGTCAAGTGGTAATGGTCA+AGG | 0.602597 | 5_3:+62677136 | Msa0823830:CDS |
| AGAAAATGAAGAAGATACAA+GGG | 0.603122 | 5_3:+62677732 | Msa0823830:CDS |
| TCTTCTCGACGTCATCGTGG+AGG | 0.603922 | 5_3:+62677985 | Msa0823830:CDS |
| AGACCCTGCAGTTGAGATGA+CGG | 0.604995 | 5_3:-62677202 | None:intergenic |
| GACTACTGGCAATTTAAGGA+AGG | 0.605578 | 5_3:+62676982 | Msa0823830:CDS |
| GGAAATGAAGAGGATGAGGA+TGG | 0.606153 | 5_3:+62675840 | Msa0823830:CDS |
| GGTTGGGCGGGCTAGCAGGG+AGG | 0.607980 | 5_3:+62678266 | Msa0823830:three_prime_UTR |
| CTGCCAGAAGCACACTCCAG+CGG | 0.608202 | 5_3:+62676901 | Msa0823830:CDS |
| TTCTGACCTACCAAATGACA+TGG | 0.612916 | 5_3:+62676937 | Msa0823830:CDS |
| TTACTGTTGATAATAATGAA+AGG | 0.613626 | 5_3:+62677632 | Msa0823830:CDS |
| AGTTCAATCTTAGATGTACT+GGG | 0.616112 | 5_3:-62676146 | None:intergenic |
| GAACCTGAAAGTCCAGAGCT+CGG | 0.616412 | 5_3:-62677463 | None:intergenic |
| TTCACACAGAAGTCGGGACA+GGG | 0.618957 | 5_3:+62677795 | Msa0823830:CDS |
| AGATAAAAGTCACAAGTCTG+AGG | 0.619109 | 5_3:+62677558 | Msa0823830:CDS |
| TCGGGACAGGGATGCAGACA+GGG | 0.619397 | 5_3:+62677807 | Msa0823830:CDS |
| GGTCAAGGCCTTGGAAGTGA+TGG | 0.619624 | 5_3:+62677151 | Msa0823830:CDS |
| GTTACTTCAGGTGACTGAGA+GGG | 0.621004 | 5_3:-62678321 | None:intergenic |
| ACTATCTTTAAGTCAGATGG+AGG | 0.622930 | 5_3:-62676182 | None:intergenic |
| TGAAAAGGGGCCGTGCAGGT+GGG | 0.623200 | 5_3:+62675283 | Msa0823830:CDS |
| TACAGTTAGCATTCATGCGG+CGG | 0.624655 | 5_3:+62677045 | Msa0823830:CDS |
| CGCTCTTCTCGACGTCATCG+TGG | 0.626116 | 5_3:+62677982 | Msa0823830:CDS |
| CGTCGAACAGCATCGCGTGA+CGG | 0.626865 | 5_3:-62672350 | None:intergenic |
| TGAGTGCGGCGTTTGAGGCG+AGG | 0.628823 | 5_3:-62672480 | None:intergenic |
| CACGATGACGTCGAGAAGAG+CGG | 0.629753 | 5_3:-62677981 | None:intergenic |
| TTGCCGTCATCTCAACTGCA+GGG | 0.630505 | 5_3:+62677199 | Msa0823830:CDS |
| ATTCTTCAGGCAGCTACTAG+GGG | 0.639195 | 5_3:+62677079 | Msa0823830:CDS |
| CTGATGATGAGCATAGTCAC+CGG | 0.643482 | 5_3:+62678145 | Msa0823830:CDS |
| TGCTACTTCTGCATCATCAG+GGG | 0.643605 | 5_3:+62675920 | Msa0823830:CDS |
| CTTGCTGGTAAAGAAAGGGA+AGG | 0.647067 | 5_3:+62677505 | Msa0823830:CDS |
| AACTACAGTTAGCATTCATG+CGG | 0.648226 | 5_3:+62677042 | Msa0823830:CDS |
| TAGGCATGACAGCTCCTCTG+AGG | 0.652290 | 5_3:+62677897 | Msa0823830:CDS |
| ACATCGCAATCTGAATGCAG+AGG | 0.653626 | 5_3:+62677231 | Msa0823830:CDS |
| AAGGCCTTGGAAGTGATGGT+GGG | 0.655180 | 5_3:+62677155 | Msa0823830:CDS |
| GGTAGGTCAGAACTCATAGA+CGG | 0.655742 | 5_3:-62676926 | None:intergenic |
| AGCTGCCTGAAGAATAGCTG+CGG | 0.660615 | 5_3:-62677071 | None:intergenic |
| TCCATGGATCTCGAAGTCGT+TGG | 0.661310 | 5_3:+62672327 | Msa0823830:exon |
| AGTTACTTCAGGTGACTGAG+AGG | 0.662084 | 5_3:-62678322 | None:intergenic |
| GCGATGCTGTTCGACGACGA+CGG | 0.663625 | 5_3:+62672357 | Msa0823830:CDS |
| ATCTGTCTATGGAAATGAAG+AGG | 0.664551 | 5_3:+62675830 | Msa0823830:CDS |
| GTTCGACGACGACGGCATGG+CGG | 0.666203 | 5_3:+62672365 | Msa0823830:CDS |
| ATTATTCTGAGAGTGAAACA+AGG | 0.668831 | 5_3:+62675633 | Msa0823830:CDS |
| TCGATGCTCACCCTCCTCAG+AGG | 0.670941 | 5_3:-62677911 | None:intergenic |
| TGAATTATTTAAGTCGACAA+GGG | 0.671251 | 5_3:+62678296 | Msa0823830:three_prime_UTR |
| CTTGAGAGAAACGCACATGT+GGG | 0.674979 | 5_3:+62675885 | Msa0823830:CDS |
| GTGCGGCGTTTGAGGCGAGG+AGG | 0.676156 | 5_3:-62672477 | None:intergenic |
| CCATCCTAATCCCACCTGCA+CGG | 0.677456 | 5_3:-62675293 | None:intergenic |
| GCTTCAACGGTAGATTGCAG+CGG | 0.682299 | 5_3:-62672507 | None:intergenic |
| AGTAGAAATATGATCTAACG+AGG | 0.686643 | 5_3:-62678434 | None:intergenic |
| CAGGAGCTGGATCAAACAGG+AGG | 0.687441 | 5_3:+62675789 | Msa0823830:CDS |
| AGACAAGTCACAAGTAAGCG+AGG | 0.688184 | 5_3:+62678245 | Msa0823830:exon |
| TGTTAGGTAAGGTTAAACAA+AGG | 0.692111 | 5_3:-62678514 | None:intergenic |
| TCTGCATTCAGATTGCGATG+TGG | 0.712740 | 5_3:-62677229 | None:intergenic |
| CCTGAAAGTCCAGAGCTCGG+TGG | 0.714414 | 5_3:-62677460 | None:intergenic |
| CAGACAGGGACAGAAACAGG+CGG | 0.718480 | 5_3:+62677821 | Msa0823830:CDS |
| GTAGAAATATGATCTAACGA+GGG | 0.718751 | 5_3:-62678433 | None:intergenic |
| AGGGTGAGCATCGACACTTG+AGG | 0.725403 | 5_3:+62677920 | Msa0823830:CDS |
| ATTGCAGCGGATGATGAGTG+CGG | 0.738074 | 5_3:-62672494 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAAAAAAATTAAAAATTTC+TGG | + | chr5_3:62673408-62673427 | Msa0823830:intron | 10.0% |
| !! | TAAATTTAATTGACATATAT+GGG | - | chr5_3:62673687-62673706 | None:intergenic | 10.0% |
| !!! | AATAAACTTTATCAAAATTT+TGG | - | chr5_3:62673904-62673923 | None:intergenic | 10.0% |
| !! | TTACTAAAAATTTCTAAATT+AGG | - | chr5_3:62677115-62677134 | None:intergenic | 10.0% |
| !!! | TAATTTAGAAATTTTTAGTA+AGG | + | chr5_3:62677114-62677133 | Msa0823830:CDS | 10.0% |
| !!! | TCAATTCTAACAAAATTTTA+CGG | - | chr5_3:62672783-62672802 | None:intergenic | 15.0% |
| !!! | TAAAATTTTGTTAGAATTGA+AGG | + | chr5_3:62672783-62672802 | Msa0823830:intron | 15.0% |
| !! | CTAAATTTAATTGACATATA+TGG | - | chr5_3:62673688-62673707 | None:intergenic | 15.0% |
| !!! | TGTCAATTAAATTTAGATTT+TGG | + | chr5_3:62673692-62673711 | Msa0823830:intron | 15.0% |
| !!! | TTTTGATAAAGTTTATTGAA+TGG | + | chr5_3:62673907-62673926 | Msa0823830:intron | 15.0% |
| !! | AAATTTGTAAAAGCAAAATT+AGG | + | chr5_3:62678392-62678411 | Msa0823830:three_prime_UTR | 15.0% |
| !! | AAGTCATAGTCTAATTAATA+AGG | + | chr5_3:62673055-62673074 | Msa0823830:intron | 20.0% |
| !! | AGTCATAGTCTAATTAATAA+GGG | + | chr5_3:62673056-62673075 | Msa0823830:intron | 20.0% |
| !!! | GGTTAAATTTTAGATTTCAT+TGG | + | chr5_3:62673206-62673225 | Msa0823830:intron | 20.0% |
| !! | AAAATGCAAATAAATATGAG+TGG | + | chr5_3:62673273-62673292 | Msa0823830:intron | 20.0% |
| !!! | AAAAGTATAAAAATCATGTG+TGG | + | chr5_3:62673370-62673389 | Msa0823830:intron | 20.0% |
| !!! | TTTTTAATTTTTTTGTTCCC+AGG | - | chr5_3:62673404-62673423 | None:intergenic | 20.0% |
| !! | AAGGTTTATAATGTTATTCT+CGG | - | chr5_3:62673493-62673512 | None:intergenic | 20.0% |
| !!! | AATTTTGGTTATTTTCAGTT+TGG | - | chr5_3:62673889-62673908 | None:intergenic | 20.0% |
| !!! | GATTTTTTTTTCTCTTTTCA+CGG | + | chr5_3:62674631-62674650 | Msa0823830:intron | 20.0% |
| !! | CCAAATAAACTAAAACAAAA+TGG | - | chr5_3:62674800-62674819 | None:intergenic | 20.0% |
| !!! | CCATTTTGTTTTAGTTTATT+TGG | + | chr5_3:62674797-62674816 | Msa0823830:intron | 20.0% |
| !! | AATCATTATCTAAACAAACA+CGG | - | chr5_3:62674903-62674922 | None:intergenic | 20.0% |
| !! | TGATTATTCAAGTATATATG+AGG | + | chr5_3:62675395-62675414 | Msa0823830:CDS | 20.0% |
| !!! | CATAACACTAATTTTAAAGA+GGG | - | chr5_3:62675478-62675497 | None:intergenic | 20.0% |
| !! | GAATAACCAACATAATAAAA+GGG | - | chr5_3:62676512-62676531 | None:intergenic | 20.0% |
| !! | AGAATAACCAACATAATAAA+AGG | - | chr5_3:62676513-62676532 | None:intergenic | 20.0% |
| !! | ATATTGTGTTAATTAATCTG+TGG | + | chr5_3:62676549-62676568 | Msa0823830:intron | 20.0% |
| !! | ACAGTAAATAAAATATTGTC+TGG | + | chr5_3:62676617-62676636 | Msa0823830:intron | 20.0% |
| !! | ATGAATATTCAAAGCAATAT+TGG | + | chr5_3:62676673-62676692 | Msa0823830:intron | 20.0% |
| !! | GTGTAAATTGATTAATTTCA+AGG | + | chr5_3:62676811-62676830 | Msa0823830:intron | 20.0% |
| !!! | TTACTGTTGATAATAATGAA+AGG | + | chr5_3:62677632-62677651 | Msa0823830:CDS | 20.0% |
| !!! | CATTTGGCTTTATTATTTAT+TGG | + | chr5_3:62678475-62678494 | Msa0823830:three_prime_UTR | 20.0% |
| ! | GATATTGAGAATTTGAGAAA+TGG | - | chr5_3:62672247-62672266 | None:intergenic | 25.0% |
| ! | ACTAGAAGAATGAATGAATT+AGG | - | chr5_3:62672611-62672630 | None:intergenic | 25.0% |
| !! | CTATATCGTTTATTCCATTT+TGG | + | chr5_3:62672649-62672668 | Msa0823830:intron | 25.0% |
| !!! | TATTGTTTTAAGTTCATTCC+AGG | + | chr5_3:62672750-62672769 | Msa0823830:intron | 25.0% |
| ! | GTTAGAATTGAAGGTTAATT+AGG | + | chr5_3:62672792-62672811 | Msa0823830:intron | 25.0% |
| ! | AAATAAATATGAGTGGTAGT+GGG | + | chr5_3:62673280-62673299 | Msa0823830:intron | 25.0% |
| !!! | TAAGTTGAGTTTTATTCTCA+TGG | + | chr5_3:62673312-62673331 | Msa0823830:intron | 25.0% |
| !! | TTTTTATTCCTACGCTAATA+GGG | - | chr5_3:62673354-62673373 | None:intergenic | 25.0% |
| ! | TTCAAAACTTGAAACAAACA+TGG | + | chr5_3:62673440-62673459 | Msa0823830:intron | 25.0% |
| ! | TCAAAACTTGAAACAAACAT+GGG | + | chr5_3:62673441-62673460 | Msa0823830:intron | 25.0% |
| ! | AGGTTTATAATGTTATTCTC+GGG | - | chr5_3:62673492-62673511 | None:intergenic | 25.0% |
| !! | TGTTTTCAAAACAAACAAGT+AGG | + | chr5_3:62673810-62673829 | Msa0823830:intron | 25.0% |
| ! | TAAATTATTCAACACACACA+GGG | - | chr5_3:62674047-62674066 | None:intergenic | 25.0% |
| ! | TGTGTGTTGAATAATTTAGT+TGG | + | chr5_3:62674049-62674068 | Msa0823830:intron | 25.0% |
| ! | GTGTGTTGAATAATTTAGTT+GGG | + | chr5_3:62674050-62674069 | Msa0823830:intron | 25.0% |
| !! | TGAATAATTTAGTTGGGTTT+TGG | + | chr5_3:62674056-62674075 | Msa0823830:intron | 25.0% |
| ! | GGACTAATTGATATATCTTT+CGG | + | chr5_3:62674579-62674598 | Msa0823830:intron | 25.0% |
| ! | AAAAAACTAAACACTGTCTT+AGG | - | chr5_3:62674678-62674697 | None:intergenic | 25.0% |
| ! | GTTTGTTTAGATAATGATTC+AGG | + | chr5_3:62674904-62674923 | Msa0823830:intron | 25.0% |
| ! | AAGATTATGAAGTAAGCTTT+CGG | - | chr5_3:62675046-62675065 | None:intergenic | 25.0% |
| ! | CATGATATCAAAAGGAAAAA+AGG | - | chr5_3:62675265-62675284 | None:intergenic | 25.0% |
| !! | TTCCTTTTGATATCATGAAA+AGG | + | chr5_3:62675268-62675287 | Msa0823830:CDS | 25.0% |
| !! | TCCTTTTGATATCATGAAAA+GGG | + | chr5_3:62675269-62675288 | Msa0823830:CDS | 25.0% |
| !!! | GCATAACACTAATTTTAAAG+AGG | - | chr5_3:62675479-62675498 | None:intergenic | 25.0% |
| ! | TCAACAAGAAACCTAAAATA+CGG | - | chr5_3:62675705-62675724 | None:intergenic | 25.0% |
| !!! | CTTTTTCTTTCAAAGGTATT+TGG | - | chr5_3:62676004-62676023 | None:intergenic | 25.0% |
| ! | AAAAAGTTCCTGTTATAAAG+CGG | + | chr5_3:62676018-62676037 | Msa0823830:CDS | 25.0% |
| ! | ATAACTATCTTTAAGTCAGA+TGG | - | chr5_3:62676188-62676207 | None:intergenic | 25.0% |
| !! | TAAGTATGATATCGATTAGA+AGG | - | chr5_3:62676308-62676327 | None:intergenic | 25.0% |
| ! | AAGAAAATGAAGAAGATACA+AGG | + | chr5_3:62677731-62677750 | Msa0823830:CDS | 25.0% |
| ! | AGAAAATGAAGAAGATACAA+GGG | + | chr5_3:62677732-62677751 | Msa0823830:CDS | 25.0% |
| ! | TGAATTATTTAAGTCGACAA+GGG | + | chr5_3:62678296-62678315 | Msa0823830:three_prime_UTR | 25.0% |
| !! | TTACAAATTTTCCATCAACA+TGG | - | chr5_3:62678382-62678401 | None:intergenic | 25.0% |
| AGAAGAATGAATGAATTAGG+AGG | - | chr5_3:62672608-62672627 | None:intergenic | 30.0% | |
| ! | TTCCATTTTGGATTCTGTTA+TGG | + | chr5_3:62672661-62672680 | Msa0823830:intron | 30.0% |
| AACCATAACAGAATCCAAAA+TGG | - | chr5_3:62672666-62672685 | None:intergenic | 30.0% | |
| !! | TGGTTGATTTTCGTGAAATT+AGG | + | chr5_3:62672681-62672700 | Msa0823830:intron | 30.0% |
| !!! | GTTTTAAGTTGAGGTTAGAT+AGG | + | chr5_3:62672711-62672730 | Msa0823830:intron | 30.0% |
| TAGATAGGAAGCTTGATATA+TGG | + | chr5_3:62672726-62672745 | Msa0823830:intron | 30.0% | |
| ATTAACTGTTTATCCAAACG+AGG | - | chr5_3:62672818-62672837 | None:intergenic | 30.0% | |
| TATAAGTTATAGCTATCTCC+TGG | + | chr5_3:62672930-62672949 | Msa0823830:intron | 30.0% | |
| !! | CTTATTTTCATAAGTTCTCC+AGG | - | chr5_3:62672951-62672970 | None:intergenic | 30.0% |
| CTGGAGAACTTATGAAAATA+AGG | + | chr5_3:62672949-62672968 | Msa0823830:intron | 30.0% | |
| !!! | ATGTGATAAGCTGTTTTTGT+AGG | + | chr5_3:62672991-62673010 | Msa0823830:intron | 30.0% |
| ACTTATTTGAACTTATCCAC+TGG | - | chr5_3:62673039-62673058 | None:intergenic | 30.0% | |
| AGTCTAATTAATAAGGGTAG+AGG | + | chr5_3:62673062-62673081 | Msa0823830:intron | 30.0% | |
| AGGAAGTTGTAGGAAAATTT+AGG | + | chr5_3:62673082-62673101 | Msa0823830:intron | 30.0% | |
| GGAAGTTGTAGGAAAATTTA+GGG | + | chr5_3:62673083-62673102 | Msa0823830:intron | 30.0% | |
| TTCCTGGAAATAATATTCCT+GGG | - | chr5_3:62673158-62673177 | None:intergenic | 30.0% | |
| ATTCCTGGAAATAATATTCC+TGG | - | chr5_3:62673159-62673178 | None:intergenic | 30.0% | |
| AAGAAAATGAAAGTCATTCC+TGG | - | chr5_3:62673174-62673193 | None:intergenic | 30.0% | |
| ! | CATTTTCTTGATCATGTGTT+TGG | + | chr5_3:62673185-62673204 | Msa0823830:intron | 30.0% |
| CAAATAAATATGAGTGGTAG+TGG | + | chr5_3:62673279-62673298 | Msa0823830:intron | 30.0% | |
| ! | CTTTTTATTCCTACGCTAAT+AGG | - | chr5_3:62673355-62673374 | None:intergenic | 30.0% |
| CAAAACTTGAAACAAACATG+GGG | + | chr5_3:62673442-62673461 | Msa0823830:intron | 30.0% | |
| !! | CTTCTAAAAGTGTTTCCTAA+GGG | - | chr5_3:62673528-62673547 | None:intergenic | 30.0% |
| ! | AGAAGGTTTTGCTGAAATTT+TGG | + | chr5_3:62673543-62673562 | Msa0823830:intron | 30.0% |
| ATGTTCTGTTATTCGATGAA+AGG | + | chr5_3:62673654-62673673 | Msa0823830:intron | 30.0% | |
| CCATCAGTATAATGATAAAG+AGG | - | chr5_3:62673731-62673750 | None:intergenic | 30.0% | |
| CCTCTTTATCATTATACTGA+TGG | + | chr5_3:62673728-62673747 | Msa0823830:intron | 30.0% | |
| ! | ACTGATGGCTTTTATATGTT+TGG | + | chr5_3:62673743-62673762 | Msa0823830:intron | 30.0% |
| ACCAAACAGAACTGTTATAA+GGG | - | chr5_3:62673966-62673985 | None:intergenic | 30.0% | |
| AACCAAACAGAACTGTTATA+AGG | - | chr5_3:62673967-62673986 | None:intergenic | 30.0% | |
| CTAAATTATTCAACACACAC+AGG | - | chr5_3:62674048-62674067 | None:intergenic | 30.0% | |
| CCTGAAATTGTATATGGAAA+AGG | - | chr5_3:62674084-62674103 | None:intergenic | 30.0% | |
| ! | CCTTTTCCATATACAATTTC+AGG | + | chr5_3:62674081-62674100 | Msa0823830:intron | 30.0% |
| TATCCTACAATTGAAACTCA+GGG | - | chr5_3:62674180-62674199 | None:intergenic | 30.0% | |
| ! | TTTCGTAGAGAGATTTTAGA+AGG | + | chr5_3:62674283-62674302 | Msa0823830:intron | 30.0% |
| !! | ATTTTAGAAGGAAGTAAAGC+TGG | + | chr5_3:62674295-62674314 | Msa0823830:intron | 30.0% |
| ! | TCATTTAAGAGTACAGATTC+TGG | + | chr5_3:62674350-62674369 | Msa0823830:intron | 30.0% |
| ACCTCAAAATCAGTTTAGTT+TGG | + | chr5_3:62674418-62674437 | Msa0823830:intron | 30.0% | |
| ! | CATGAACAAGTCTTTTCAAA+TGG | + | chr5_3:62674544-62674563 | Msa0823830:intron | 30.0% |
| TTCAAATGGTTCTCATCATT+TGG | + | chr5_3:62674558-62674577 | Msa0823830:intron | 30.0% | |
| !! | TATATCTTTCGGTGCAATTT+TGG | + | chr5_3:62674590-62674609 | Msa0823830:intron | 30.0% |
| !!! | TTTTTTTTCTCTTTTCACGG+TGG | + | chr5_3:62674634-62674653 | Msa0823830:intron | 30.0% |
| ACAACAATCTTTACATTTGC+AGG | + | chr5_3:62674711-62674730 | Msa0823830:intron | 30.0% | |
| TTATCTAAACAAACACGGAA+AGG | - | chr5_3:62674898-62674917 | None:intergenic | 30.0% | |
| AGATTATGAAGTAAGCTTTC+GGG | - | chr5_3:62675045-62675064 | None:intergenic | 30.0% | |
| AAGCATGAAAATCACATGAT+CGG | - | chr5_3:62675097-62675116 | None:intergenic | 30.0% | |
| ! | ACATTGGTTAAACAATGAGA+GGG | - | chr5_3:62675127-62675146 | None:intergenic | 30.0% |
| ATTGTTTAACCAATGTGACT+AGG | + | chr5_3:62675131-62675150 | Msa0823830:intron | 30.0% | |
| AGGGTACATATGTTATTCTA+AGG | + | chr5_3:62675166-62675185 | Msa0823830:intron | 30.0% | |
| ! | CCTTTTGATATCATGAAAAG+GGG | + | chr5_3:62675270-62675289 | Msa0823830:CDS | 30.0% |
| TATACCTCTTGTGAGAAAAT+GGG | + | chr5_3:62675332-62675351 | Msa0823830:CDS | 30.0% | |
| GCTGGAAAAGAAAAACAAAA+AGG | - | chr5_3:62675539-62675558 | None:intergenic | 30.0% | |
| CTCTCAGAATAATTTCTGAT+TGG | - | chr5_3:62675626-62675645 | None:intergenic | 30.0% | |
| ! | ATTATTCTGAGAGTGAAACA+AGG | + | chr5_3:62675633-62675652 | Msa0823830:CDS | 30.0% |
| AAGGAGATAATCCAACATTT+GGG | + | chr5_3:62675652-62675671 | Msa0823830:CDS | 30.0% | |
| ! | ATCATCTTCATCCGTATTTT+AGG | + | chr5_3:62675691-62675710 | Msa0823830:CDS | 30.0% |
| !! | ACAGGAACTTTTTCTTTCAA+AGG | - | chr5_3:62676011-62676030 | None:intergenic | 30.0% |
| AGTTCAATCTTAGATGTACT+GGG | - | chr5_3:62676149-62676168 | None:intergenic | 30.0% | |
| TAGTTCAATCTTAGATGTAC+TGG | - | chr5_3:62676150-62676169 | None:intergenic | 30.0% | |
| CCAACATAATAAAAGGGAAT+GGG | - | chr5_3:62676506-62676525 | None:intergenic | 30.0% | |
| ACCAACATAATAAAAGGGAA+TGG | - | chr5_3:62676507-62676526 | None:intergenic | 30.0% | |
| GCTTTATAAAATGTTCCTTC+TGG | + | chr5_3:62676714-62676733 | Msa0823830:intron | 30.0% | |
| TGTTTACAGTCTAAGTTACA+AGG | + | chr5_3:62676872-62676891 | Msa0823830:intron | 30.0% | |
| TCATCTTGAATTTCTCTTTC+CGG | - | chr5_3:62676964-62676983 | None:intergenic | 30.0% | |
| AAATCTTGCTGGTAAAGAAA+GGG | + | chr5_3:62677501-62677520 | Msa0823830:CDS | 30.0% | |
| ! | TCTGAGTTATCAGTATTGAA+TGG | - | chr5_3:62677541-62677560 | None:intergenic | 30.0% |
| ATAATGAAAGGCGATCAAAA+AGG | + | chr5_3:62677644-62677663 | Msa0823830:CDS | 30.0% | |
| CTGAATTATTTAAGTCGACA+AGG | + | chr5_3:62678295-62678314 | Msa0823830:three_prime_UTR | 30.0% | |
| TCAGAAACATTAGTTACTTC+AGG | - | chr5_3:62678336-62678355 | None:intergenic | 30.0% | |
| GTAGAAATATGATCTAACGA+GGG | - | chr5_3:62678436-62678455 | None:intergenic | 30.0% | |
| AGTAGAAATATGATCTAACG+AGG | - | chr5_3:62678437-62678456 | None:intergenic | 30.0% | |
| TGTTAGGTAAGGTTAAACAA+AGG | - | chr5_3:62678517-62678536 | None:intergenic | 30.0% | |
| !!! | CTTTTTCAATTTGCTGTGTT+AGG | - | chr5_3:62678533-62678552 | None:intergenic | 30.0% |
| !! | ATTCGATTCTAGAACTTCCA+TGG | + | chr5_3:62672311-62672330 | Msa0823830:exon | 35.0% |
| TGTGGTTGTTCTTCATGAAT+CGG | - | chr5_3:62672576-62672595 | None:intergenic | 35.0% | |
| !!! | GGTTTCGTTGTTTTAAGTTG+AGG | + | chr5_3:62672702-62672721 | Msa0823830:intron | 35.0% |
| ! | AAATTTTACGGTTTTTCGCC+TGG | - | chr5_3:62672771-62672790 | None:intergenic | 35.0% |
| ! | TTTAGGGTGTGTTTGTTTCA+AGG | + | chr5_3:62673099-62673118 | Msa0823830:intron | 35.0% |
| TTCCCAGGAATATTATTTCC+AGG | + | chr5_3:62673153-62673172 | Msa0823830:intron | 35.0% | |
| TCATGTGTGGTTAAAATTCC+TGG | + | chr5_3:62673383-62673402 | Msa0823830:intron | 35.0% | |
| CATGTGTGGTTAAAATTCCT+GGG | + | chr5_3:62673384-62673403 | Msa0823830:intron | 35.0% | |
| ATTCTCGGGAATATGAGATA+AGG | - | chr5_3:62673478-62673497 | None:intergenic | 35.0% | |
| !! | CCTTCTAAAAGTGTTTCCTA+AGG | - | chr5_3:62673529-62673548 | None:intergenic | 35.0% |
| ! | CCTTAGGAAACACTTTTAGA+AGG | + | chr5_3:62673526-62673545 | Msa0823830:intron | 35.0% |
| TAGCATTTACCTCGTGAATA+AGG | + | chr5_3:62673573-62673592 | Msa0823830:intron | 35.0% | |
| ! | GTGAATAAGGCATTAAGGTT+TGG | + | chr5_3:62673586-62673605 | Msa0823830:intron | 35.0% |
| TCTTGTGAACCATGAACAAT+AGG | - | chr5_3:62673836-62673855 | None:intergenic | 35.0% | |
| TTCAAGTGCAGTTCATAGTT+TGG | - | chr5_3:62673866-62673885 | None:intergenic | 35.0% | |
| ACCCTTATAACAGTTCTGTT+TGG | + | chr5_3:62673962-62673981 | Msa0823830:intron | 35.0% | |
| ACATGAAAATGCAAGCTTCA+GGG | + | chr5_3:62674018-62674037 | Msa0823830:intron | 35.0% | |
| ATCCTACAATTGAAACTCAG+GGG | - | chr5_3:62674179-62674198 | None:intergenic | 35.0% | |
| CTATCCTACAATTGAAACTC+AGG | - | chr5_3:62674181-62674200 | None:intergenic | 35.0% | |
| AGTCATGACTCAGTGATTTA+AGG | + | chr5_3:62674255-62674274 | Msa0823830:intron | 35.0% | |
| !!! | CTAAACTGATTTTGAGGTTC+AGG | - | chr5_3:62674416-62674435 | None:intergenic | 35.0% |
| !! | GCCAAACTAAACTGATTTTG+AGG | - | chr5_3:62674422-62674441 | None:intergenic | 35.0% |
| AGTTCATCGAACCTATTCTT+TGG | + | chr5_3:62674469-62674488 | Msa0823830:intron | 35.0% | |
| GTTCATCGAACCTATTCTTT+GGG | + | chr5_3:62674470-62674489 | Msa0823830:intron | 35.0% | |
| AAACTAAACACTGTCTTAGG+CGG | - | chr5_3:62674675-62674694 | None:intergenic | 35.0% | |
| GGATGCAATCTAATATGCTA+CGG | + | chr5_3:62674732-62674751 | Msa0823830:intron | 35.0% | |
| ! | CAAGTAAGGATGTTTTCAAC+TGG | + | chr5_3:62674771-62674790 | Msa0823830:intron | 35.0% |
| GTAGGTGTATGATATTGTTG+CGG | + | chr5_3:62674839-62674858 | Msa0823830:intron | 35.0% | |
| ! | CACATTGGTTAAACAATGAG+AGG | - | chr5_3:62675128-62675147 | None:intergenic | 35.0% |
| CAATTATCACCTAGTCACAT+TGG | - | chr5_3:62675143-62675162 | None:intergenic | 35.0% | |
| TGACTAGGTGATAATTGTCT+AGG | + | chr5_3:62675146-62675165 | Msa0823830:intron | 35.0% | |
| GACTAGGTGATAATTGTCTA+GGG | + | chr5_3:62675147-62675166 | Msa0823830:intron | 35.0% | |
| ATGTCTAAGTTTCAGATGCT+TGG | + | chr5_3:62675195-62675214 | Msa0823830:intron | 35.0% | |
| AAAGAAGTTCTTGTGACTCA+AGG | + | chr5_3:62675223-62675242 | Msa0823830:intron | 35.0% | |
| ! | CCCCTTTTCATGATATCAAA+AGG | - | chr5_3:62675273-62675292 | None:intergenic | 35.0% |
| CTATACCTCTTGTGAGAAAA+TGG | + | chr5_3:62675331-62675350 | Msa0823830:CDS | 35.0% | |
| ATGTATTCATATATACCGCC+TGG | + | chr5_3:62675447-62675466 | Msa0823830:intron | 35.0% | |
| CAAGGAGATAATCCAACATT+TGG | + | chr5_3:62675651-62675670 | Msa0823830:CDS | 35.0% | |
| AAAGATGACAAAAACGATGC+AGG | + | chr5_3:62675741-62675760 | Msa0823830:CDS | 35.0% | |
| TTTGGACAAGAATAGAAGTC+AGG | + | chr5_3:62675770-62675789 | Msa0823830:CDS | 35.0% | |
| ATCTGTCTATGGAAATGAAG+AGG | + | chr5_3:62675830-62675849 | Msa0823830:CDS | 35.0% | |
| ! | AGGTCACTAGTATTTTCAGT+TGG | - | chr5_3:62675867-62675886 | None:intergenic | 35.0% |
| !! | TGTTTTTGTCCTAGCTGAAA+TGG | - | chr5_3:62676072-62676091 | None:intergenic | 35.0% |
| ATTTCAGCTAGGACAAAAAC+AGG | + | chr5_3:62676071-62676090 | Msa0823830:CDS | 35.0% | |
| ACTATCTTTAAGTCAGATGG+AGG | - | chr5_3:62676185-62676204 | None:intergenic | 35.0% | |
| GATTAGAAGGCAGAAGAAAT+GGG | - | chr5_3:62676295-62676314 | None:intergenic | 35.0% | |
| CACAAACAGATGAATTGCAA+GGG | - | chr5_3:62676390-62676409 | None:intergenic | 35.0% | |
| ACACAAACAGATGAATTGCA+AGG | - | chr5_3:62676391-62676410 | None:intergenic | 35.0% | |
| TTGCAATTCATCTGTTTGTG+TGG | + | chr5_3:62676390-62676409 | Msa0823830:intron | 35.0% | |
| TGGTTCAAATTATGCGAAGT+GGG | + | chr5_3:62676410-62676429 | Msa0823830:intron | 35.0% | |
| ATTATGCGAAGTGGGAAATT+AGG | + | chr5_3:62676418-62676437 | Msa0823830:intron | 35.0% | |
| ACGATGTAGAACATGATTCA+AGG | + | chr5_3:62676453-62676472 | Msa0823830:intron | 35.0% | |
| ! | CCCATTCCCTTTTATTATGT+TGG | + | chr5_3:62676503-62676522 | Msa0823830:intron | 35.0% |
| TTGTATTTGATTCAGCCAGA+AGG | - | chr5_3:62676732-62676751 | None:intergenic | 35.0% | |
| GAGAAATTCAAGATGACTAC+TGG | + | chr5_3:62676968-62676987 | Msa0823830:CDS | 35.0% | |
| AGATGACTACTGGCAATTTA+AGG | + | chr5_3:62676978-62676997 | Msa0823830:CDS | 35.0% | |
| ! | TGCTAACTGTAGTTTGAGAT+TGG | - | chr5_3:62677036-62677055 | None:intergenic | 35.0% |
| AACTACAGTTAGCATTCATG+CGG | + | chr5_3:62677042-62677061 | Msa0823830:CDS | 35.0% | |
| !!! | ATTTTTAGTAAGGCGTCAAG+TGG | + | chr5_3:62677124-62677143 | Msa0823830:CDS | 35.0% |
| TTTAGTCATATGTGCTTCAG+AGG | - | chr5_3:62677329-62677348 | None:intergenic | 35.0% | |
| !! | CTTGGCAGTTCACTTTTAAA+TGG | - | chr5_3:62677424-62677443 | None:intergenic | 35.0% |
| GAAATCTTGCTGGTAAAGAA+AGG | + | chr5_3:62677500-62677519 | Msa0823830:CDS | 35.0% | |
| AGATAAAAGTCACAAGTCTG+AGG | + | chr5_3:62677558-62677577 | Msa0823830:CDS | 35.0% | |
| CATGTTTACTGGATCTTGAA+CGG | - | chr5_3:62677675-62677694 | None:intergenic | 35.0% | |
| AAGATCCAGTAAACATGAAG+AGG | + | chr5_3:62677678-62677697 | Msa0823830:CDS | 35.0% | |
| !!! | ACGTGATTGATGCTTTTTTC+TGG | - | chr5_3:62677770-62677789 | None:intergenic | 35.0% |
| CAACGACAAGTATTCTCATA+GGG | + | chr5_3:62677870-62677889 | Msa0823830:CDS | 35.0% | |
| !!! | CATCAACATGGCTCTAATTT+TGG | - | chr5_3:62678370-62678389 | None:intergenic | 35.0% |
| CAAAATTAGAGCCATGTTGA+TGG | + | chr5_3:62678368-62678387 | Msa0823830:three_prime_UTR | 35.0% | |
| ACGAGGGTTAAAAATACATC+AGG | - | chr5_3:62678420-62678439 | None:intergenic | 35.0% | |
| ! | CATATTTCTACTGTTCCATC+AGG | + | chr5_3:62678445-62678464 | Msa0823830:three_prime_UTR | 35.0% |
| TCCATCAGGCATAAATCATT+TGG | + | chr5_3:62678459-62678478 | Msa0823830:three_prime_UTR | 35.0% | |
| !! | TCAATTTGCTGTGTTAGGTA+AGG | - | chr5_3:62678528-62678547 | None:intergenic | 35.0% |
| ATGATCAAGGTCAGCTTCAA+CGG | - | chr5_3:62672523-62672542 | None:intergenic | 40.0% | |
| !! | CGAGATAACGTTGATGATCA+AGG | - | chr5_3:62672536-62672555 | None:intergenic | 40.0% |
| TCATGAATCGGAGAAGAAGA+AGG | - | chr5_3:62672564-62672583 | None:intergenic | 40.0% | |
| CATGAAGAACAACCACAAGA+AGG | + | chr5_3:62672579-62672598 | Msa0823830:CDS | 40.0% | |
| ATTAGGAGGTTACCTTCTTG+TGG | - | chr5_3:62672594-62672613 | None:intergenic | 40.0% | |
| AAGGTTAATTAGGCCTCGTT+TGG | + | chr5_3:62672802-62672821 | Msa0823830:intron | 40.0% | |
| CAAACAGAAACTTATGCCAG+TGG | + | chr5_3:62673020-62673039 | Msa0823830:intron | 40.0% | |
| ATAAGGGTAGAGGAAGTTGT+AGG | + | chr5_3:62673072-62673091 | Msa0823830:intron | 40.0% | |
| TATTCCTACGCTAATAGGGT+GGG | - | chr5_3:62673350-62673369 | None:intergenic | 40.0% | |
| TTATTCCTACGCTAATAGGG+TGG | - | chr5_3:62673351-62673370 | None:intergenic | 40.0% | |
| ! | CTAAGGGTGTGTTTGTTTCA+AGG | - | chr5_3:62673512-62673531 | None:intergenic | 40.0% |
| CTTGAAACAAACACACCCTT+AGG | + | chr5_3:62673510-62673529 | Msa0823830:intron | 40.0% | |
| ! | ACCTCGTGAATAAGGCATTA+AGG | + | chr5_3:62673581-62673600 | Msa0823830:intron | 40.0% |
| ! | ACCTTAATGCCTTATTCACG+AGG | - | chr5_3:62673585-62673604 | None:intergenic | 40.0% |
| ACAAGTAGGCCTATTGTTCA+TGG | + | chr5_3:62673824-62673843 | Msa0823830:intron | 40.0% | |
| TGGAACTGATGTGTTGAAGA+TGG | + | chr5_3:62673927-62673946 | Msa0823830:intron | 40.0% | |
| CTGATGTGTTGAAGATGGTT+TGG | + | chr5_3:62673932-62673951 | Msa0823830:intron | 40.0% | |
| ACAGAACTGTTATAAGGGTG+TGG | - | chr5_3:62673961-62673980 | None:intergenic | 40.0% | |
| CACATGAAAATGCAAGCTTC+AGG | + | chr5_3:62674017-62674036 | Msa0823830:intron | 40.0% | |
| CATGAAAATGCAAGCTTCAG+GGG | + | chr5_3:62674019-62674038 | Msa0823830:intron | 40.0% | |
| GTGGCACCTGAAATTGTATA+TGG | - | chr5_3:62674090-62674109 | None:intergenic | 40.0% | |
| GACTCGTTAGAGATCTGAAT+CGG | - | chr5_3:62674239-62674258 | None:intergenic | 40.0% | |
| CCAAACTGAACCCAAAGAAT+AGG | - | chr5_3:62674483-62674502 | None:intergenic | 40.0% | |
| ! | CCTATTCTTTGGGTTCAGTT+TGG | + | chr5_3:62674480-62674499 | Msa0823830:intron | 40.0% |
| ATACAAACTGAACCATGACG+AGG | + | chr5_3:62674509-62674528 | Msa0823830:intron | 40.0% | |
| ACTTGTTCATGCTCGTTTGT+AGG | - | chr5_3:62674535-62674554 | None:intergenic | 40.0% | |
| ! | CTCTTTTCACGGTGGTTTTT+TGG | + | chr5_3:62674642-62674661 | Msa0823830:intron | 40.0% |
| CATGTGTCAGACTACAAGTA+AGG | + | chr5_3:62674757-62674776 | Msa0823830:intron | 40.0% | |
| ! | GTTAGTGCTACTACTGTTGT+AGG | + | chr5_3:62674821-62674840 | Msa0823830:intron | 40.0% |
| ATCATTGTCCTTTGTCTCAG+TGG | - | chr5_3:62674989-62675008 | None:intergenic | 40.0% | |
| !! | AAGGACAATGATACTGACTC+TGG | + | chr5_3:62674997-62675016 | Msa0823830:CDS | 40.0% |
| ! | TCATCCCATTTTCTCACAAG+AGG | - | chr5_3:62675339-62675358 | None:intergenic | 40.0% |
| !! | ATTTTAAAGAGGGTCTTGCC+AGG | - | chr5_3:62675468-62675487 | None:intergenic | 40.0% |
| ATCTGATGTAGCTTCTCGTT+TGG | - | chr5_3:62675564-62675583 | None:intergenic | 40.0% | |
| GCAATGTTTGTCAGCAAACA+TGG | + | chr5_3:62675597-62675616 | Msa0823830:CDS | 40.0% | |
| TACGGATGAAGATGATGATC+AGG | - | chr5_3:62675687-62675706 | None:intergenic | 40.0% | |
| TCTTTGCTTGGATCTGTCTA+TGG | + | chr5_3:62675819-62675838 | Msa0823830:CDS | 40.0% | |
| CTATGGAAATGAAGAGGATG+AGG | + | chr5_3:62675836-62675855 | Msa0823830:CDS | 40.0% | |
| AGAAATGCTTCCATCCTTCT+TGG | - | chr5_3:62675976-62675995 | None:intergenic | 40.0% | |
| ! | GACTGATTCCGCTTTATAAC+AGG | - | chr5_3:62676029-62676048 | None:intergenic | 40.0% |
| TTAAGACAGCCATTTCAGCT+AGG | + | chr5_3:62676060-62676079 | Msa0823830:CDS | 40.0% | |
| CGATTAGAAGGCAGAAGAAA+TGG | - | chr5_3:62676296-62676315 | None:intergenic | 40.0% | |
| AGTTCTTCAAACTGCTGAAG+AGG | + | chr5_3:62676337-62676356 | Msa0823830:CDS | 40.0% | |
| GTGGTTCAAATTATGCGAAG+TGG | + | chr5_3:62676409-62676428 | Msa0823830:intron | 40.0% | |
| ACAGTCTAAGTTACAAGGCA+AGG | + | chr5_3:62676877-62676896 | Msa0823830:intron | 40.0% | |
| CAGTCTAAGTTACAAGGCAA+GGG | + | chr5_3:62676878-62676897 | Msa0823830:intron | 40.0% | |
| TTCTGACCTACCAAATGACA+TGG | + | chr5_3:62676937-62676956 | Msa0823830:CDS | 40.0% | |
| GACTACTGGCAATTTAAGGA+AGG | + | chr5_3:62676982-62677001 | Msa0823830:CDS | 40.0% | |
| ACTGGCAATTTAAGGAAGGA+TGG | + | chr5_3:62676986-62677005 | Msa0823830:CDS | 40.0% | |
| ! | GTTTGAGATTGGCTGTCTTT+GGG | - | chr5_3:62677025-62677044 | None:intergenic | 40.0% |
| ! | AGTTTGAGATTGGCTGTCTT+TGG | - | chr5_3:62677026-62677045 | None:intergenic | 40.0% |
| TATTCTTCAGGCAGCTACTA+GGG | + | chr5_3:62677078-62677097 | Msa0823830:CDS | 40.0% | |
| !! | CAGCTACTAGGGGTATTAAA+AGG | + | chr5_3:62677089-62677108 | Msa0823830:CDS | 40.0% |
| !!! | CACTTTTTCTGCAATAGCCT+TGG | - | chr5_3:62677278-62677297 | None:intergenic | 40.0% |
| CAAGGCTATTGCAGAAAAAG+TGG | + | chr5_3:62677276-62677295 | Msa0823830:CDS | 40.0% | |
| TTCGCAGCCATGATAAAAAG+TGG | + | chr5_3:62677391-62677410 | Msa0823830:CDS | 40.0% | |
| CCATGATAAAAAGTGGAGCT+GGG | + | chr5_3:62677398-62677417 | Msa0823830:CDS | 40.0% | |
| GCTGAGATTAGAAATCTTGC+TGG | + | chr5_3:62677490-62677509 | Msa0823830:CDS | 40.0% | |
| ATCCAGTAAACATGAAGAGG+AGG | + | chr5_3:62677681-62677700 | Msa0823830:CDS | 40.0% | |
| TTCCTCCTCTTCATGTTTAC+TGG | - | chr5_3:62677686-62677705 | None:intergenic | 40.0% | |
| ATGAGAATACTTGTCGTTGG+AGG | - | chr5_3:62677869-62677888 | None:intergenic | 40.0% | |
| CCTATGAGAATACTTGTCGT+TGG | - | chr5_3:62677872-62677891 | None:intergenic | 40.0% | |
| CCAACGACAAGTATTCTCAT+AGG | + | chr5_3:62677869-62677888 | Msa0823830:CDS | 40.0% | |
| AGTATTCTCATAGGGAGAGT+AGG | + | chr5_3:62677878-62677897 | Msa0823830:CDS | 40.0% | |
| TACGTGAATGTCTATGCTCA+TGG | - | chr5_3:62678026-62678045 | None:intergenic | 40.0% | |
| GAATGTCTATGCTCATCATC+AGG | - | chr5_3:62678063-62678082 | None:intergenic | 40.0% | |
| TATGCTTTGTCTTTCTGCTC+CGG | - | chr5_3:62678167-62678186 | None:intergenic | 40.0% | |
| GAAAGACAAAGCATAAGAGC+AGG | + | chr5_3:62678172-62678191 | Msa0823830:CDS | 40.0% | |
| GCCAAATGATTTATGCCTGA+TGG | - | chr5_3:62678463-62678482 | None:intergenic | 40.0% | |
| TTCCAATCAACGAGAGCTTC+CGG | - | chr5_3:62672405-62672424 | None:intergenic | 45.0% | |
| GATGTTCGTCATCTTCTCTC+CGG | + | chr5_3:62672447-62672466 | Msa0823830:CDS | 45.0% | |
| TTCCTTGTAATGCTGTTCCC+AGG | + | chr5_3:62673138-62673157 | Msa0823830:intron | 45.0% | |
| TTCCTGGGAACAGCATTACA+AGG | - | chr5_3:62673143-62673162 | None:intergenic | 45.0% | |
| AATTCCCACCCTATTAGCGT+AGG | + | chr5_3:62673343-62673362 | Msa0823830:intron | 45.0% | |
| CCAACTAAAGCACATAACGC+AGG | - | chr5_3:62673625-62673644 | None:intergenic | 45.0% | |
| CCTGCGTTATGTGCTTTAGT+TGG | + | chr5_3:62673622-62673641 | Msa0823830:intron | 45.0% | |
| ! | CGGTTAAACAGAAGAGTGTG+TGG | - | chr5_3:62674109-62674128 | None:intergenic | 45.0% |
| ATTTGAACCGCAACTTGGCA+AGG | - | chr5_3:62674138-62674157 | None:intergenic | 45.0% | |
| GACCCCTGAGTTTCAATTGT+AGG | + | chr5_3:62674174-62674193 | Msa0823830:intron | 45.0% | |
| ! | TTGGCTGCTGGCTATTAAGT+TGG | + | chr5_3:62674609-62674628 | Msa0823830:intron | 45.0% |
| ! | TAGCTTGTCCACTGAGACAA+AGG | + | chr5_3:62674978-62674997 | Msa0823830:CDS | 45.0% |
| !! | CTTTCGGGTACTGGAAAGTT+AGG | - | chr5_3:62675030-62675049 | None:intergenic | 45.0% |
| ! | TGAAGTAAGCTTTCGGGTAC+TGG | - | chr5_3:62675039-62675058 | None:intergenic | 45.0% |
| !! | GGAAAAAAGGTGCCTGTGAA+TGG | - | chr5_3:62675252-62675271 | None:intergenic | 45.0% |
| TGATGTAGCTTCTCGTTTGG+AGG | - | chr5_3:62675561-62675580 | None:intergenic | 45.0% | |
| GAAGATGATGATCAGGCATC+AGG | - | chr5_3:62675680-62675699 | None:intergenic | 45.0% | |
| AAACGATGCAGGCTCAACTT+TGG | + | chr5_3:62675752-62675771 | Msa0823830:CDS | 45.0% | |
| CAAGAATAGAAGTCAGGAGC+TGG | + | chr5_3:62675776-62675795 | Msa0823830:CDS | 45.0% | |
| GGAAATGAAGAGGATGAGGA+TGG | + | chr5_3:62675840-62675859 | Msa0823830:CDS | 45.0% | |
| CTTGAGAGAAACGCACATGT+GGG | + | chr5_3:62675885-62675904 | Msa0823830:CDS | 45.0% | |
| ! | CTGCTACTTCTGCATCATCA+GGG | + | chr5_3:62675919-62675938 | Msa0823830:CDS | 45.0% |
| ! | TGCTACTTCTGCATCATCAG+GGG | + | chr5_3:62675920-62675939 | Msa0823830:CDS | 45.0% |
| ATCTTCAGATGCAGCCAAGA+AGG | + | chr5_3:62675959-62675978 | Msa0823830:CDS | 45.0% | |
| ACCATTAGACCCTGAATCTG+AGG | - | chr5_3:62676102-62676121 | None:intergenic | 45.0% | |
| TCAGATGGAGGTTCAACAAC+AGG | - | chr5_3:62676173-62676192 | None:intergenic | 45.0% | |
| TGAGTCTGTTCTTGCTGAAC+AGG | + | chr5_3:62676250-62676269 | Msa0823830:CDS | 45.0% | |
| GGTAGGTCAGAACTCATAGA+CGG | - | chr5_3:62676929-62676948 | None:intergenic | 45.0% | |
| ACCTACCAAATGACATGGAC+CGG | + | chr5_3:62676942-62676961 | Msa0823830:CDS | 45.0% | |
| TCTTTCCGGTCCATGTCATT+TGG | - | chr5_3:62676950-62676969 | None:intergenic | 45.0% | |
| TACAGTTAGCATTCATGCGG+CGG | + | chr5_3:62677045-62677064 | Msa0823830:CDS | 45.0% | |
| CTATTCTTCAGGCAGCTACT+AGG | + | chr5_3:62677077-62677096 | Msa0823830:CDS | 45.0% | |
| ATTCTTCAGGCAGCTACTAG+GGG | + | chr5_3:62677079-62677098 | Msa0823830:CDS | 45.0% | |
| ! | AGTAAGGCGTCAAGTGGTAA+TGG | + | chr5_3:62677130-62677149 | Msa0823830:CDS | 45.0% |
| AATTCCCACCATCACTTCCA+AGG | - | chr5_3:62677162-62677181 | None:intergenic | 45.0% | |
| TCTGCATTCAGATTGCGATG+TGG | - | chr5_3:62677232-62677251 | None:intergenic | 45.0% | |
| ACATCGCAATCTGAATGCAG+AGG | + | chr5_3:62677231-62677250 | Msa0823830:CDS | 45.0% | |
| GCCATGATAAAAAGTGGAGC+TGG | + | chr5_3:62677397-62677416 | Msa0823830:CDS | 45.0% | |
| !!! | CCCAGCTCCACTTTTTATCA+TGG | - | chr5_3:62677401-62677420 | None:intergenic | 45.0% |
| GGCTCAACAGATAAAGCTCT+TGG | - | chr5_3:62677442-62677461 | None:intergenic | 45.0% | |
| CTTGCTGGTAAAGAAAGGGA+AGG | + | chr5_3:62677505-62677524 | Msa0823830:CDS | 45.0% | |
| ACATGAAGAGGAGGAAGAAG+AGG | + | chr5_3:62677690-62677709 | Msa0823830:CDS | 45.0% | |
| GTCGATCTTCACACAGAAGT+CGG | + | chr5_3:62677788-62677807 | Msa0823830:CDS | 45.0% | |
| TCGATCTTCACACAGAAGTC+GGG | + | chr5_3:62677789-62677808 | Msa0823830:CDS | 45.0% | |
| AGAATACTTGTCGTTGGAGG+AGG | - | chr5_3:62677866-62677885 | None:intergenic | 45.0% | |
| ! | AGAGCGGTGTTTTTCATCAG+AGG | - | chr5_3:62677968-62677987 | None:intergenic | 45.0% |
| ! | CTGATGATGAGCATAGTCAC+CGG | + | chr5_3:62678145-62678164 | Msa0823830:CDS | 45.0% |
| AGACAAGTCACAAGTAAGCG+AGG | + | chr5_3:62678245-62678264 | Msa0823830:exon | 45.0% | |
| AAGTCACAAGTAAGCGAGGT+TGG | + | chr5_3:62678249-62678268 | Msa0823830:three_prime_UTR | 45.0% | |
| AGTCACAAGTAAGCGAGGTT+GGG | + | chr5_3:62678250-62678269 | Msa0823830:three_prime_UTR | 45.0% | |
| GTTACTTCAGGTGACTGAGA+GGG | - | chr5_3:62678324-62678343 | None:intergenic | 45.0% | |
| AGTTACTTCAGGTGACTGAG+AGG | - | chr5_3:62678325-62678344 | None:intergenic | 45.0% | |
| !!! | AATACAATAATTATTTTATT+TGG | + | chr5_3:62676745-62676764 | Msa0823830:intron | 5.0% |
| !!! | ATACAATAATTATTTTATTT+GGG | + | chr5_3:62676746-62676765 | Msa0823830:intron | 5.0% |
| TCCATGGATCTCGAAGTCGT+TGG | + | chr5_3:62672327-62672346 | Msa0823830:exon | 50.0% | |
| ATTGCAGCGGATGATGAGTG+CGG | - | chr5_3:62672497-62672516 | None:intergenic | 50.0% | |
| GCTTCAACGGTAGATTGCAG+CGG | - | chr5_3:62672510-62672529 | None:intergenic | 50.0% | |
| GCAACTTGGCAAGGTGGAAT+CGG | - | chr5_3:62674129-62674148 | None:intergenic | 50.0% | |
| GATTCCACCTTGCCAAGTTG+CGG | + | chr5_3:62674128-62674147 | Msa0823830:intron | 50.0% | |
| CTCGGATTTGAACCGCAACT+TGG | - | chr5_3:62674143-62674162 | None:intergenic | 50.0% | |
| !!! | TTCGGTGCAATTTTGGCTGC+TGG | + | chr5_3:62674597-62674616 | Msa0823830:intron | 50.0% |
| TCAGGTGCAGTGAGTTCATC+AGG | + | chr5_3:62674922-62674941 | Msa0823830:CDS | 50.0% | |
| GACTCAAGGTAGCCATTCAC+AGG | + | chr5_3:62675237-62675256 | Msa0823830:intron | 50.0% | |
| TTAAAGAGGGTCTTGCCAGG+CGG | - | chr5_3:62675465-62675484 | None:intergenic | 50.0% | |
| GGCATCAGGAACCCAAATGT+TGG | - | chr5_3:62675666-62675685 | None:intergenic | 50.0% | |
| AGTCAGGAGCTGGATCAAAC+AGG | + | chr5_3:62675786-62675805 | Msa0823830:CDS | 50.0% | |
| ! | GGAGGTGCATTGTCTTTGCT+TGG | + | chr5_3:62675807-62675826 | Msa0823830:CDS | 50.0% |
| CCACATGTGCGTTTCTCTCA+AGG | - | chr5_3:62675887-62675906 | None:intergenic | 50.0% | |
| CCTTGAGAGAAACGCACATG+TGG | + | chr5_3:62675884-62675903 | Msa0823830:CDS | 50.0% | |
| ! | GCTGCTACTTCTGCATCATC+AGG | + | chr5_3:62675918-62675937 | Msa0823830:CDS | 50.0% |
| TCAGATGCAGCCAAGAAGGA+TGG | + | chr5_3:62675963-62675982 | Msa0823830:CDS | 50.0% | |
| ACAGGAGTTGCCTCAGATTC+AGG | + | chr5_3:62676089-62676108 | Msa0823830:CDS | 50.0% | |
| CAGGAGTTGCCTCAGATTCA+GGG | + | chr5_3:62676090-62676109 | Msa0823830:CDS | 50.0% | |
| GCCTCAGATTCAGGGTCTAA+TGG | + | chr5_3:62676098-62676117 | Msa0823830:CDS | 50.0% | |
| AACAGGATCGTGCTCATGGA+AGG | + | chr5_3:62676267-62676286 | Msa0823830:CDS | 50.0% | |
| ! | TCCGGTCCATGTCATTTGGT+AGG | - | chr5_3:62676946-62676965 | None:intergenic | 50.0% |
| ! | GATTGGCTGTCTTTGGGAGT+TGG | - | chr5_3:62677019-62677038 | None:intergenic | 50.0% |
| AGCTGCCTGAAGAATAGCTG+CGG | - | chr5_3:62677074-62677093 | None:intergenic | 50.0% | |
| !! | GCGTCAAGTGGTAATGGTCA+AGG | + | chr5_3:62677136-62677155 | Msa0823830:CDS | 50.0% |
| !! | AGTGGTAATGGTCAAGGCCT+TGG | + | chr5_3:62677142-62677161 | Msa0823830:CDS | 50.0% |
| AAGGCCTTGGAAGTGATGGT+GGG | + | chr5_3:62677155-62677174 | Msa0823830:CDS | 50.0% | |
| TTTGCCGTCATCTCAACTGC+AGG | + | chr5_3:62677198-62677217 | Msa0823830:CDS | 50.0% | |
| TTGCCGTCATCTCAACTGCA+GGG | + | chr5_3:62677199-62677218 | Msa0823830:CDS | 50.0% | |
| AGACCCTGCAGTTGAGATGA+CGG | - | chr5_3:62677205-62677224 | None:intergenic | 50.0% | |
| TGCTTCTGTTCCAGTTGCCA+AGG | + | chr5_3:62677258-62677277 | Msa0823830:CDS | 50.0% | |
| ! | TCTGCAATAGCCTTGGCAAC+TGG | - | chr5_3:62677271-62677290 | None:intergenic | 50.0% |
| GAACCTGAAAGTCCAGAGCT+CGG | - | chr5_3:62677466-62677485 | None:intergenic | 50.0% | |
| TTCACACAGAAGTCGGGACA+GGG | + | chr5_3:62677795-62677814 | Msa0823830:CDS | 50.0% | |
| ATGCAGACAGGGACAGAAAC+AGG | + | chr5_3:62677818-62677837 | Msa0823830:CDS | 50.0% | |
| CAGGTCTCATGCTGAAAGAG+AGG | + | chr5_3:62678191-62678210 | Msa0823830:CDS | 50.0% | |
| TGCTGAAAGAGAGGCAGAGT+TGG | + | chr5_3:62678200-62678219 | Msa0823830:CDS | 50.0% | |
| TGAAAGAGAGGCAGAGTTGG+AGG | + | chr5_3:62678203-62678222 | Msa0823830:CDS | 50.0% | |
| GCCAACGACTTCGAGATCCA+TGG | - | chr5_3:62672331-62672350 | None:intergenic | 55.0% | |
| CACCGGAAGCTCTCGTTGAT+TGG | + | chr5_3:62672400-62672419 | Msa0823830:CDS | 55.0% | |
| ! | CGTTTGAGGCGAGGAGGAAT+TGG | - | chr5_3:62672474-62672493 | None:intergenic | 55.0% |
| GATGATGAGTGCGGCGTTTG+AGG | - | chr5_3:62672488-62672507 | None:intergenic | 55.0% | |
| TGAACCGCAACTTGGCAAGG+TGG | - | chr5_3:62674135-62674154 | None:intergenic | 55.0% | |
| CTCGTTTGTAGGCCTCGTCA+TGG | - | chr5_3:62674524-62674543 | None:intergenic | 55.0% | |
| ATCATGAAAAGGGGCCGTGC+AGG | + | chr5_3:62675279-62675298 | Msa0823830:CDS | 55.0% | |
| CCATCCTAATCCCACCTGCA+CGG | - | chr5_3:62675296-62675315 | None:intergenic | 55.0% | |
| GTAGCTTCTCGTTTGGAGGC+TGG | - | chr5_3:62675557-62675576 | None:intergenic | 55.0% | |
| CAGGAGCTGGATCAAACAGG+AGG | + | chr5_3:62675789-62675808 | Msa0823830:CDS | 55.0% | |
| GCTGAACAGGATCGTGCTCA+TGG | + | chr5_3:62676263-62676282 | Msa0823830:CDS | 55.0% | |
| GAACTCATAGACGGATCCGC+TGG | - | chr5_3:62676920-62676939 | None:intergenic | 55.0% | |
| GGTCAAGGCCTTGGAAGTGA+TGG | + | chr5_3:62677151-62677170 | Msa0823830:CDS | 55.0% | |
| CAAGGCCTTGGAAGTGATGG+TGG | + | chr5_3:62677154-62677173 | Msa0823830:CDS | 55.0% | |
| GTGGGAATTTGCCCAGCTCT+CGG | + | chr5_3:62677173-62677192 | Msa0823830:CDS | 55.0% | |
| AAAGTGGCTACTGCAGCAGC+AGG | + | chr5_3:62677292-62677311 | Msa0823830:CDS | 55.0% | |
| AGAGGAGGAAGAAGAGGACG+AGG | + | chr5_3:62677696-62677715 | Msa0823830:CDS | 55.0% | |
| CTTCACACAGAAGTCGGGAC+AGG | + | chr5_3:62677794-62677813 | Msa0823830:CDS | 55.0% | |
| CAGACAGGGACAGAAACAGG+CGG | + | chr5_3:62677821-62677840 | Msa0823830:CDS | 55.0% | |
| TAGGCATGACAGCTCCTCTG+AGG | + | chr5_3:62677897-62677916 | Msa0823830:CDS | 55.0% | |
| ! | CATGACAGCTCCTCTGAGGA+GGG | + | chr5_3:62677901-62677920 | Msa0823830:CDS | 55.0% |
| !! | AGGGTGAGCATCGACACTTG+AGG | + | chr5_3:62677920-62677939 | Msa0823830:CDS | 55.0% |
| CACGATGACGTCGAGAAGAG+CGG | - | chr5_3:62677984-62678003 | None:intergenic | 55.0% | |
| TCTTCTCGACGTCATCGTGG+AGG | + | chr5_3:62677985-62678004 | Msa0823830:CDS | 55.0% | |
| CTTCTCGACGTCATCGTGGA+GGG | + | chr5_3:62677986-62678005 | Msa0823830:CDS | 55.0% | |
| AAGAGAGGCAGAGTTGGAGG+AGG | + | chr5_3:62678206-62678225 | Msa0823830:CDS | 55.0% | |
| AGAGAGGCAGAGTTGGAGGA+GGG | + | chr5_3:62678207-62678226 | Msa0823830:CDS | 55.0% | |
| CACAAGTAAGCGAGGTTGGG+CGG | + | chr5_3:62678253-62678272 | Msa0823830:three_prime_UTR | 55.0% | |
| ACAAGTAAGCGAGGTTGGGC+GGG | + | chr5_3:62678254-62678273 | Msa0823830:three_prime_UTR | 55.0% | |
| CGTCGAACAGCATCGCGTGA+CGG | - | chr5_3:62672353-62672372 | None:intergenic | 60.0% | |
| GCGATGCTGTTCGACGACGA+CGG | + | chr5_3:62672357-62672376 | Msa0823830:CDS | 60.0% | |
| GAGGCGAGGAGGAATTGGAC+CGG | - | chr5_3:62672469-62672488 | None:intergenic | 60.0% | |
| AGGGGTCTCGCTGTACGACT+CGG | - | chr5_3:62674161-62674180 | None:intergenic | 60.0% | |
| ATGAAAAGGGGCCGTGCAGG+TGG | + | chr5_3:62675282-62675301 | Msa0823830:CDS | 60.0% | |
| TGAAAAGGGGCCGTGCAGGT+GGG | + | chr5_3:62675283-62675302 | Msa0823830:CDS | 60.0% | |
| CCGTGCAGGTGGGATTAGGA+TGG | + | chr5_3:62675293-62675312 | Msa0823830:CDS | 60.0% | |
| ! | CTGCCAGAAGCACACTCCAG+CGG | + | chr5_3:62676901-62676920 | Msa0823830:CDS | 60.0% |
| GATCCGCTGGAGTGTGCTTC+TGG | - | chr5_3:62676907-62676926 | None:intergenic | 60.0% | |
| GGCAGCCGCAGCTATTCTTC+AGG | + | chr5_3:62677066-62677085 | Msa0823830:CDS | 60.0% | |
| GACGGCAAACTCCGAGAGCT+GGG | - | chr5_3:62677187-62677206 | None:intergenic | 60.0% | |
| TGACGGCAAACTCCGAGAGC+TGG | - | chr5_3:62677188-62677207 | None:intergenic | 60.0% | |
| TACTGCAGCAGCAGGTGAGG+CGG | + | chr5_3:62677300-62677319 | Msa0823830:CDS | 60.0% | |
| TCTGTTGAGCCACCGAGCTC+TGG | + | chr5_3:62677451-62677470 | Msa0823830:CDS | 60.0% | |
| CCTGAAAGTCCAGAGCTCGG+TGG | - | chr5_3:62677463-62677482 | None:intergenic | 60.0% | |
| !! | CCACCGAGCTCTGGACTTTC+AGG | + | chr5_3:62677460-62677479 | Msa0823830:CDS | 60.0% |
| TCGGGACAGGGATGCAGACA+GGG | + | chr5_3:62677807-62677826 | Msa0823830:CDS | 60.0% | |
| ! | GCATGACAGCTCCTCTGAGG+AGG | + | chr5_3:62677900-62677919 | Msa0823830:CDS | 60.0% |
| TCGATGCTCACCCTCCTCAG+AGG | - | chr5_3:62677914-62677933 | None:intergenic | 60.0% | |
| CGCTCTTCTCGACGTCATCG+TGG | + | chr5_3:62677982-62678001 | Msa0823830:CDS | 60.0% | |
| GAGAGGCAGAGTTGGAGGAG+GGG | + | chr5_3:62678208-62678227 | Msa0823830:CDS | 60.0% | |
| AGAGGCAGAGTTGGAGGAGG+GGG | + | chr5_3:62678209-62678228 | Msa0823830:CDS | 60.0% | |
| GCTGTTCGACGACGACGGCA+TGG | + | chr5_3:62672362-62672381 | Msa0823830:CDS | 65.0% | |
| GTTCGACGACGACGGCATGG+CGG | + | chr5_3:62672365-62672384 | Msa0823830:CDS | 65.0% | |
| GGCGGCGTTCGTGAACTCAC+CGG | + | chr5_3:62672383-62672402 | Msa0823830:CDS | 65.0% | |
| ! | TGAGTGCGGCGTTTGAGGCG+AGG | - | chr5_3:62672483-62672502 | None:intergenic | 65.0% |
| GGCTACTGCAGCAGCAGGTG+AGG | + | chr5_3:62677297-62677316 | Msa0823830:CDS | 65.0% | |
| GTCGGGACAGGGATGCAGAC+AGG | + | chr5_3:62677806-62677825 | Msa0823830:CDS | 65.0% | |
| ! | GTGCGGCGTTTGAGGCGAGG+AGG | - | chr5_3:62672480-62672499 | None:intergenic | 70.0% |
| GGGGCCGTGCAGGTGGGATT+AGG | + | chr5_3:62675289-62675308 | Msa0823830:CDS | 70.0% | |
| !! | CGAGGTTGGGCGGGCTAGCA+GGG | + | chr5_3:62678263-62678282 | Msa0823830:three_prime_UTR | 70.0% |
| !! | GCGAGGTTGGGCGGGCTAGC+AGG | + | chr5_3:62678262-62678281 | Msa0823830:three_prime_UTR | 75.0% |
| !! | GGTTGGGCGGGCTAGCAGGG+AGG | + | chr5_3:62678266-62678285 | Msa0823830:three_prime_UTR | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 62672238 | 62678565 | 62672238 | ID=Msa0823830;Name=Msa0823830 |
| chr5_3 | mRNA | 62672238 | 62678565 | 62672238 | ID=Msa0823830-mRNA-1;Parent=Msa0823830;Name=Msa0823830-mRNA-1;_AED=0.23;_eAED=0.23;_QI=92|0.5|0.8|1|1|1|5|320|918 |
| chr5_3 | exon | 62672238 | 62672600 | 62672238 | ID=Msa0823830-mRNA-1:exon:19497;Parent=Msa0823830-mRNA-1 |
| chr5_3 | exon | 62674914 | 62675065 | 62674914 | ID=Msa0823830-mRNA-1:exon:19498;Parent=Msa0823830-mRNA-1 |
| chr5_3 | exon | 62675249 | 62675416 | 62675249 | ID=Msa0823830-mRNA-1:exon:19499;Parent=Msa0823830-mRNA-1 |
| chr5_3 | exon | 62675558 | 62676358 | 62675558 | ID=Msa0823830-mRNA-1:exon:19500;Parent=Msa0823830-mRNA-1 |
| chr5_3 | exon | 62676881 | 62678565 | 62676881 | ID=Msa0823830-mRNA-1:exon:19501;Parent=Msa0823830-mRNA-1 |
| chr5_3 | five_prime_UTR | 62672238 | 62672329 | 62672238 | ID=Msa0823830-mRNA-1:five_prime_utr;Parent=Msa0823830-mRNA-1 |
| chr5_3 | CDS | 62672330 | 62672600 | 62672330 | ID=Msa0823830-mRNA-1:cds;Parent=Msa0823830-mRNA-1 |
| chr5_3 | CDS | 62674914 | 62675065 | 62674914 | ID=Msa0823830-mRNA-1:cds;Parent=Msa0823830-mRNA-1 |
| chr5_3 | CDS | 62675249 | 62675416 | 62675249 | ID=Msa0823830-mRNA-1:cds;Parent=Msa0823830-mRNA-1 |
| chr5_3 | CDS | 62675558 | 62676358 | 62675558 | ID=Msa0823830-mRNA-1:cds;Parent=Msa0823830-mRNA-1 |
| chr5_3 | CDS | 62676881 | 62678245 | 62676881 | ID=Msa0823830-mRNA-1:cds;Parent=Msa0823830-mRNA-1 |
| chr5_3 | three_prime_UTR | 62678246 | 62678565 | 62678246 | ID=Msa0823830-mRNA-1:three_prime_utr;Parent=Msa0823830-mRNA-1 |
| Gene Sequence |
| Protein sequence |
