Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0824760 | XP_003617710.2 | 96.421 | 503 | 9 | 3 | 1 | 494 | 1 | 503 | 0.0 | 972 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0824760 | sp|Q9FM80|MTEF9_ARATH | 61.265 | 506 | 164 | 6 | 6 | 493 | 4 | 495 | 0.0 | 577 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0824760 | G7K4F3 | 96.421 | 503 | 9 | 3 | 1 | 494 | 1 | 503 | 0.0 | 972 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0824760 | TR | mTERF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006820 | Msa0824760 | 0.804292 | 2.316591e-49 | -8.615850e-47 |
| Msa0787730 | Msa0824760 | 0.805414 | 1.350505e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0824760 | MtrunA17_Chr5g0445491 | 96.421 | 503 | 9 | 3 | 1 | 494 | 1 | 503 | 0.0 | 972 |
| Msa0824760 | MtrunA17_Chr2g0294671 | 32.456 | 228 | 139 | 7 | 221 | 442 | 215 | 433 | 1.93e-26 | 112 |
| Msa0824760 | MtrunA17_Chr2g0294671 | 30.256 | 195 | 125 | 5 | 250 | 440 | 208 | 395 | 1.87e-17 | 85.1 |
| Msa0824760 | MtrunA17_Chr2g0294671 | 27.111 | 225 | 135 | 6 | 176 | 394 | 277 | 478 | 5.20e-17 | 83.6 |
| Msa0824760 | MtrunA17_Chr2g0311181 | 27.049 | 244 | 160 | 6 | 218 | 460 | 70 | 296 | 1.01e-25 | 107 |
| Msa0824760 | MtrunA17_Chr5g0428941 | 24.924 | 329 | 202 | 7 | 182 | 472 | 171 | 492 | 2.96e-25 | 108 |
| Msa0824760 | MtrunA17_Chr5g0428941 | 25.263 | 190 | 136 | 3 | 212 | 401 | 134 | 317 | 3.92e-11 | 65.5 |
| Msa0824760 | MtrunA17_Chr4g0043941 | 28.195 | 266 | 177 | 6 | 179 | 439 | 42 | 298 | 7.05e-24 | 102 |
| Msa0824760 | MtrunA17_Chr4g0043941 | 27.753 | 227 | 160 | 2 | 217 | 440 | 41 | 266 | 8.60e-19 | 87.4 |
| Msa0824760 | MtrunA17_Chr5g0417641 | 29.319 | 191 | 132 | 1 | 252 | 442 | 88 | 275 | 3.04e-21 | 94.4 |
| Msa0824760 | MtrunA17_Chr6g0448821 | 28.829 | 222 | 154 | 3 | 218 | 439 | 119 | 336 | 4.43e-21 | 95.1 |
| Msa0824760 | MtrunA17_Chr4g0034981 | 23.630 | 292 | 185 | 5 | 185 | 440 | 277 | 566 | 1.32e-19 | 92.0 |
| Msa0824760 | MtrunA17_Chr4g0034981 | 24.476 | 286 | 198 | 7 | 167 | 441 | 184 | 462 | 1.23e-12 | 70.1 |
| Msa0824760 | MtrunA17_Chr1g0212691 | 22.526 | 293 | 216 | 7 | 149 | 437 | 143 | 428 | 8.22e-18 | 86.3 |
| Msa0824760 | MtrunA17_Chr1g0212691 | 24.255 | 235 | 168 | 6 | 218 | 448 | 108 | 336 | 9.49e-15 | 76.6 |
| Msa0824760 | MtrunA17_Chr8g0391881 | 27.064 | 218 | 152 | 4 | 221 | 436 | 162 | 374 | 2.31e-17 | 84.0 |
| Msa0824760 | MtrunA17_Chr8g0391881 | 25.683 | 183 | 133 | 3 | 218 | 399 | 86 | 266 | 2.76e-13 | 71.2 |
| Msa0824760 | MtrunA17_Chr2g0304101 | 24.215 | 223 | 154 | 4 | 218 | 436 | 70 | 281 | 1.89e-16 | 80.1 |
| Msa0824760 | MtrunA17_Chr7g0250261 | 25.984 | 254 | 173 | 7 | 216 | 466 | 42 | 283 | 3.90e-16 | 79.0 |
| Msa0824760 | MtrunA17_Chr0c29g0494001 | 25.984 | 254 | 173 | 7 | 216 | 466 | 42 | 283 | 3.90e-16 | 79.0 |
| Msa0824760 | MtrunA17_Chr3g0094341 | 22.951 | 183 | 127 | 5 | 218 | 399 | 32 | 201 | 9.85e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0824760 | AT5G55580.1 | 61.265 | 506 | 164 | 6 | 6 | 493 | 4 | 495 | 0.0 | 577 |
| Msa0824760 | AT5G55580.2 | 73.669 | 357 | 90 | 1 | 137 | 493 | 37 | 389 | 0.0 | 553 |
| Msa0824760 | AT5G55580.3 | 56.790 | 405 | 143 | 6 | 6 | 392 | 4 | 394 | 2.15e-140 | 409 |
| Msa0824760 | AT2G21710.1 | 26.502 | 283 | 198 | 5 | 186 | 465 | 320 | 595 | 8.04e-27 | 114 |
| Msa0824760 | AT2G21710.1 | 23.256 | 387 | 271 | 11 | 97 | 472 | 127 | 498 | 2.22e-13 | 73.2 |
| Msa0824760 | AT4G02990.2 | 24.096 | 332 | 205 | 6 | 180 | 472 | 177 | 500 | 5.95e-24 | 105 |
| Msa0824760 | AT4G02990.1 | 24.096 | 332 | 205 | 6 | 180 | 472 | 177 | 500 | 5.95e-24 | 105 |
| Msa0824760 | AT1G78930.1 | 28.111 | 217 | 152 | 3 | 223 | 439 | 342 | 554 | 6.13e-23 | 102 |
| Msa0824760 | AT1G78930.1 | 27.879 | 165 | 111 | 3 | 211 | 372 | 397 | 556 | 4.08e-14 | 75.5 |
| Msa0824760 | AT4G38160.4 | 26.692 | 266 | 181 | 6 | 180 | 439 | 43 | 300 | 8.59e-23 | 99.8 |
| Msa0824760 | AT4G38160.4 | 29.310 | 232 | 156 | 6 | 217 | 442 | 41 | 270 | 1.18e-20 | 93.6 |
| Msa0824760 | AT4G38160.1 | 26.692 | 266 | 181 | 6 | 180 | 439 | 43 | 300 | 8.59e-23 | 99.8 |
| Msa0824760 | AT4G38160.1 | 29.310 | 232 | 156 | 6 | 217 | 442 | 41 | 270 | 1.18e-20 | 93.6 |
| Msa0824760 | AT4G38160.2 | 26.692 | 266 | 181 | 6 | 180 | 439 | 43 | 300 | 1.08e-22 | 99.8 |
| Msa0824760 | AT4G38160.2 | 29.310 | 232 | 156 | 6 | 217 | 442 | 41 | 270 | 1.40e-20 | 93.6 |
| Msa0824760 | AT4G38160.3 | 26.692 | 266 | 181 | 6 | 180 | 439 | 43 | 300 | 3.34e-22 | 98.6 |
| Msa0824760 | AT4G38160.3 | 29.310 | 232 | 156 | 6 | 217 | 442 | 41 | 270 | 3.24e-20 | 92.8 |
| Msa0824760 | AT2G03050.1 | 26.786 | 224 | 154 | 5 | 218 | 439 | 33 | 248 | 6.15e-21 | 93.2 |
| Msa0824760 | AT2G03050.2 | 26.786 | 224 | 154 | 5 | 218 | 439 | 34 | 249 | 7.72e-21 | 93.2 |
| Msa0824760 | AT2G21710.2 | 24.896 | 241 | 174 | 4 | 186 | 423 | 320 | 556 | 1.74e-20 | 95.1 |
| Msa0824760 | AT2G21710.2 | 23.256 | 387 | 271 | 11 | 97 | 472 | 127 | 498 | 3.94e-13 | 72.0 |
| Msa0824760 | AT2G44020.1 | 25.763 | 295 | 181 | 5 | 183 | 441 | 145 | 437 | 2.43e-20 | 94.4 |
| Msa0824760 | AT2G44020.1 | 25.957 | 235 | 152 | 8 | 211 | 442 | 83 | 298 | 1.57e-11 | 67.0 |
| Msa0824760 | AT2G21710.3 | 24.686 | 239 | 173 | 4 | 186 | 421 | 320 | 554 | 6.94e-20 | 93.2 |
| Msa0824760 | AT2G21710.3 | 23.256 | 387 | 271 | 11 | 97 | 472 | 127 | 498 | 3.48e-13 | 72.4 |
| Msa0824760 | AT2G34620.1 | 26.104 | 249 | 166 | 6 | 218 | 462 | 56 | 290 | 8.80e-20 | 90.5 |
| Msa0824760 | AT4G14605.2 | 26.027 | 219 | 155 | 5 | 221 | 439 | 236 | 447 | 1.31e-19 | 92.0 |
| Msa0824760 | AT4G14605.2 | 25.778 | 225 | 138 | 6 | 176 | 394 | 262 | 463 | 1.07e-13 | 73.6 |
| Msa0824760 | AT4G14605.1 | 26.027 | 219 | 155 | 5 | 221 | 439 | 236 | 447 | 1.31e-19 | 92.0 |
| Msa0824760 | AT4G14605.1 | 25.778 | 225 | 138 | 6 | 176 | 394 | 262 | 463 | 1.07e-13 | 73.6 |
| Msa0824760 | AT2G36000.2 | 27.600 | 250 | 157 | 8 | 218 | 461 | 74 | 305 | 3.74e-19 | 88.6 |
| Msa0824760 | AT2G36000.1 | 27.600 | 250 | 157 | 8 | 218 | 461 | 74 | 305 | 4.17e-19 | 89.0 |
| Msa0824760 | AT3G18870.1 | 25.984 | 254 | 130 | 8 | 221 | 466 | 69 | 272 | 7.98e-17 | 81.3 |
Find 95 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTAAGCACCTTTGGAATTA+AGG | 0.140140 | 5_3:-64283345 | Msa0824760:CDS |
| AGCAATAATTTGCCCTATTT+TGG | 0.169836 | 5_3:+64283106 | None:intergenic |
| CATGTGTTACAAATTGTTTC+AGG | 0.183767 | 5_3:+64281738 | None:intergenic |
| GACTCACGTTGCTTTCTTAA+TGG | 0.188627 | 5_3:-64283147 | Msa0824760:CDS |
| CATCTTCACAATGCTCTCTT+TGG | 0.219102 | 5_3:+64282890 | None:intergenic |
| TGACTTCAATCTCTTGTCTT+TGG | 0.225373 | 5_3:+64284212 | None:intergenic |
| CGTTGCTTTCTTAATGGGCT+TGG | 0.237557 | 5_3:-64283141 | Msa0824760:CDS |
| GGATGCTATTCTCTGACTTT+TGG | 0.242258 | 5_3:+64283844 | None:intergenic |
| ACATGTGCCTCTCATAAATT+TGG | 0.254970 | 5_3:+64283309 | None:intergenic |
| CTCCTTAGGAAATTTATTCT+TGG | 0.307382 | 5_3:+64282816 | None:intergenic |
| TCCAACGTATTGACATTTCA+TGG | 0.312784 | 5_3:-64282953 | Msa0824760:CDS |
| ACTAAACAAGCTCACCTTTC+AGG | 0.321032 | 5_3:+64282042 | None:intergenic |
| ATCTTCACAATGCTCTCTTT+GGG | 0.327138 | 5_3:+64282891 | None:intergenic |
| GCTAAGGTACATCGGGTATT+TGG | 0.329609 | 5_3:+64282495 | None:intergenic |
| CCAAGAGGAAATGGTCCTTT+TGG | 0.331786 | 5_3:+64282412 | None:intergenic |
| CTTGATTACTTAAGCACCTT+TGG | 0.335021 | 5_3:-64283353 | Msa0824760:CDS |
| TCGTCCTCGTCATAAGTTCT+TGG | 0.344950 | 5_3:-64282452 | Msa0824760:CDS |
| ACTCACGTTGCTTTCTTAAT+GGG | 0.345489 | 5_3:-64283146 | Msa0824760:CDS |
| TAGATTACTTAATGAGTCTT+GGG | 0.347132 | 5_3:-64283247 | Msa0824760:CDS |
| GATGTACCTTAGCTTGTCTT+TGG | 0.348758 | 5_3:-64282485 | Msa0824760:CDS |
| GGCGTACCTAGTACCAAAAT+AGG | 0.359195 | 5_3:-64283119 | Msa0824760:CDS |
| GTTGCTTTCTTAATGGGCTT+GGG | 0.365837 | 5_3:-64283140 | Msa0824760:CDS |
| GTTGTCTGAAGAGATTCTTT+TGG | 0.368169 | 5_3:-64283396 | Msa0824760:CDS |
| GCATGATTAGAGGAAGGAAT+TGG | 0.374741 | 5_3:+64284837 | None:intergenic |
| TTGAAGTCAAAGACAGTTGC+AGG | 0.386479 | 5_3:-64284198 | Msa0824760:intron |
| CAATCAACTTGCACGAGTAC+TGG | 0.402183 | 5_3:-64282239 | Msa0824760:three_prime_UTR |
| AGAAGCAGAAGCATGATTAG+AGG | 0.407915 | 5_3:+64284827 | None:intergenic |
| TAAACTAAAGTGCCAAGTTA+TGG | 0.418506 | 5_3:-64281928 | Msa0824760:three_prime_UTR |
| TGATGATGAAGATGAAGAAA+TGG | 0.419929 | 5_3:-64284679 | Msa0824760:CDS |
| GAAGTTGTGGTTGCCTCAAA+AGG | 0.421347 | 5_3:+64283198 | None:intergenic |
| CTGCATTACAGTATTGATGA+TGG | 0.426933 | 5_3:-64282846 | Msa0824760:CDS |
| ACTAAAGATCCAAGAGGAAA+TGG | 0.436568 | 5_3:+64282403 | None:intergenic |
| AGATATTTAATTGAGGAAGT+TGG | 0.438021 | 5_3:-64283029 | Msa0824760:CDS |
| ATAGATTACTTAATGAGTCT+TGG | 0.440723 | 5_3:-64283248 | Msa0824760:CDS |
| TGACAAAATGATTCATCAGT+TGG | 0.450331 | 5_3:+64282379 | None:intergenic |
| GCAGGTGCTATCTCTGTCCT+TGG | 0.454121 | 5_3:-64282584 | Msa0824760:intron |
| CAAAGAGAGCATTGTGAAGA+TGG | 0.456446 | 5_3:-64282889 | Msa0824760:CDS |
| TAGACAACAAGAAAAGGAAA+AGG | 0.464265 | 5_3:-64283906 | Msa0824760:CDS |
| CCAAAAGGACCATTTCCTCT+TGG | 0.467379 | 5_3:-64282412 | Msa0824760:CDS |
| TTCGATGGAGAAAAGATATC+CGG | 0.473213 | 5_3:-64283420 | Msa0824760:CDS |
| TATGACGAGGACGAATTCTC+TGG | 0.474277 | 5_3:+64282461 | None:intergenic |
| AGAATGTTGAAAGGATTGTA+AGG | 0.481481 | 5_3:+64284861 | None:intergenic |
| ATGTGTTACAAATTGTTTCA+GGG | 0.484475 | 5_3:+64281739 | None:intergenic |
| AATTGAGGAAGTTGGCATCA+AGG | 0.486070 | 5_3:-64283021 | Msa0824760:CDS |
| TCAATTAAATATCTTACTGT+TGG | 0.487640 | 5_3:+64283038 | None:intergenic |
| GATGTTTCTTAACAAAGAGT+TGG | 0.488384 | 5_3:-64282919 | Msa0824760:CDS |
| TACAGATAGACAACAAGAAA+AGG | 0.490910 | 5_3:-64283912 | Msa0824760:intron |
| AATTGTCTATGTATCATGTA+TGG | 0.491141 | 5_3:+64281770 | None:intergenic |
| GCTGTTTCTGTTAGCCTGAA+AGG | 0.491234 | 5_3:-64282056 | Msa0824760:intron |
| TTCCAAGAATAAATTTCCTA+AGG | 0.495242 | 5_3:-64282818 | Msa0824760:CDS |
| AATTAATGTATGTTCTGCAC+AGG | 0.499032 | 5_3:-64283276 | Msa0824760:CDS |
| ATTATACAGTTCATCAATGA+AGG | 0.506760 | 5_3:+64281886 | None:intergenic |
| AAAGCCGAAGTATTTGTACT+TGG | 0.508230 | 5_3:-64282551 | Msa0824760:CDS |
| GCGTACCTAGTACCAAAATA+GGG | 0.510052 | 5_3:-64283118 | Msa0824760:CDS |
| AACAGTAAGATATTTAATTG+AGG | 0.516231 | 5_3:-64283036 | Msa0824760:CDS |
| TTGTGATTCCTTAATTCCAA+AGG | 0.518718 | 5_3:+64283337 | None:intergenic |
| ACCAATCGAAAATCACCCTA+TGG | 0.522397 | 5_3:-64284726 | Msa0824760:CDS |
| TCTTTGGCATTAAGATCAGT+AGG | 0.525087 | 5_3:+64284228 | None:intergenic |
| CGGCTTTAGATTAGCTTCCA+AGG | 0.526666 | 5_3:+64282567 | None:intergenic |
| ATAAATTTCCTAAGGAGCAT+AGG | 0.526985 | 5_3:-64282810 | Msa0824760:CDS |
| TGAATATACAACTTTAATGA+AGG | 0.533737 | 5_3:+64281842 | None:intergenic |
| AAGACAAGCTAAGGTACATC+GGG | 0.535136 | 5_3:+64282488 | None:intergenic |
| GTAGTTTCGTAGAAATTCGA+TGG | 0.537172 | 5_3:-64283435 | Msa0824760:intron |
| TTTACCAAGTACAAATACTT+CGG | 0.538689 | 5_3:+64282547 | None:intergenic |
| GTACATCGGGTATTTGGTCA+AGG | 0.541793 | 5_3:+64282501 | None:intergenic |
| TCTCTAAAGAAAGCTCCAAA+AGG | 0.542731 | 5_3:-64282427 | Msa0824760:CDS |
| GGAATTGGAAGAATGTTGAA+AGG | 0.542797 | 5_3:+64284852 | None:intergenic |
| TCTGGTCCAAAGACAAGCTA+AGG | 0.551617 | 5_3:+64282479 | None:intergenic |
| AGACAACAAGAAAAGGAAAA+GGG | 0.551962 | 5_3:-64283905 | Msa0824760:CDS |
| AAATGATAGAATCCATAACT+TGG | 0.557217 | 5_3:+64281916 | None:intergenic |
| ATACGTTGGACAAGAATTTG+AGG | 0.570242 | 5_3:+64282966 | None:intergenic |
| CACGAGTACTGGAAAATGAT+CGG | 0.571795 | 5_3:-64282228 | Msa0824760:three_prime_UTR |
| AAATATTGTGCATATAGAGT+AGG | 0.577021 | 5_3:+64282148 | None:intergenic |
| ATGTATGTTCTGCACAGGAA+AGG | 0.591778 | 5_3:-64283271 | Msa0824760:CDS |
| AAAGACAAGCTAAGGTACAT+CGG | 0.593674 | 5_3:+64282487 | None:intergenic |
| AGATTACTTAATGAGTCTTG+GGG | 0.595406 | 5_3:-64283246 | Msa0824760:CDS |
| AGAATCTCTTCAGACAACTC+CGG | 0.598051 | 5_3:+64283401 | None:intergenic |
| GTGCTTAAGTAATCAAGAAG+TGG | 0.598694 | 5_3:+64283359 | None:intergenic |
| GCAGAAGCATGATTAGAGGA+AGG | 0.598929 | 5_3:+64284831 | None:intergenic |
| TCTTCATCATCAGAGTCATA+CGG | 0.598960 | 5_3:+64284690 | None:intergenic |
| CATCAGAGTCATACGGAGAG+AGG | 0.602302 | 5_3:+64284697 | None:intergenic |
| ATACTGTAATGCAGAAGCTG+AGG | 0.609678 | 5_3:+64282855 | None:intergenic |
| ACCGTGTATTCTAGAAGTTG+TGG | 0.612066 | 5_3:+64283185 | None:intergenic |
| ACAAGAAAATAACAGTGCAA+AGG | 0.615006 | 5_3:-64283819 | Msa0824760:intron |
| TACTGTAATGCAGAAGCTGA+GGG | 0.620289 | 5_3:+64282856 | None:intergenic |
| TCCATGAAATGTCAATACGT+TGG | 0.626915 | 5_3:+64282952 | None:intergenic |
| GGTGTGAGATCTCTTAACAA+TGG | 0.634820 | 5_3:-64283884 | Msa0824760:CDS |
| AATTCATCCAAATTTATGAG+AGG | 0.636805 | 5_3:-64283316 | Msa0824760:CDS |
| GGTAAATGAACTTCACAATG+AGG | 0.640731 | 5_3:-64282530 | Msa0824760:CDS |
| AATCTTGACTAGCCTTACAC+AGG | 0.642412 | 5_3:-64282763 | Msa0824760:intron |
| ACCACAACTTCTAGAATACA+CGG | 0.655167 | 5_3:-64283186 | Msa0824760:CDS |
| TATAGAGTAGGCACATCACA+TGG | 0.663477 | 5_3:+64282160 | None:intergenic |
| GTTGGAACTAAAGATCCAAG+AGG | 0.706322 | 5_3:+64282397 | None:intergenic |
| GAAACCAAGAACTTATGACG+AGG | 0.725904 | 5_3:+64282448 | None:intergenic |
| ACAACTTCTAGAATACACGG+TGG | 0.811670 | 5_3:-64283183 | Msa0824760:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTCTACTAAAATTAAAAAT+TGG | + | chr5_3:64282075-64282094 | None:intergenic | 10.0% |
| !! | AAAATACTAAAATTTCATCA+TGG | + | chr5_3:64282027-64282046 | None:intergenic | 15.0% |
| !! | ATATATTTGAATTGAAGTAA+TGG | - | chr5_3:64282156-64282175 | Msa0824760:three_prime_UTR | 15.0% |
| !! | TATATTTGAATTGAAGTAAT+GGG | - | chr5_3:64282157-64282176 | Msa0824760:three_prime_UTR | 15.0% |
| !!! | AGTGCATTAATTTTAATTTT+TGG | - | chr5_3:64282294-64282313 | Msa0824760:CDS | 15.0% |
| !! | ATAATATAACTACTAATAAG+AGG | + | chr5_3:64282858-64282877 | None:intergenic | 15.0% |
| !! | AGTAGTTATATTATGTTATT+AGG | - | chr5_3:64282864-64282883 | Msa0824760:CDS | 15.0% |
| !! | CATTGTAATTATATGTATTT+AGG | - | chr5_3:64283048-64283067 | Msa0824760:CDS | 15.0% |
| !!! | TTTTAGTAGAAAATTTGAAG+TGG | - | chr5_3:64282083-64282102 | Msa0824760:three_prime_UTR | 20.0% |
| !!! | TTTAGTAGAAAATTTGAAGT+GGG | - | chr5_3:64282084-64282103 | Msa0824760:three_prime_UTR | 20.0% |
| !!! | CTTGGTAGTTTTAATTATAA+GGG | - | chr5_3:64282436-64282455 | Msa0824760:CDS | 20.0% |
| !!! | TTGGTAGTTTTAATTATAAG+GGG | - | chr5_3:64282437-64282456 | Msa0824760:CDS | 20.0% |
| !! | TCAATTAAATATCTTACTGT+TGG | + | chr5_3:64283555-64283574 | None:intergenic | 20.0% |
| !! | AACAGTAAGATATTTAATTG+AGG | - | chr5_3:64283554-64283573 | Msa0824760:intron | 20.0% |
| !! | AAGGAAATGATGTTATATAA+TGG | - | chr5_3:64283908-64283927 | Msa0824760:CDS | 20.0% |
| !! | TGAATATACAACTTTAATGA+AGG | + | chr5_3:64284751-64284770 | None:intergenic | 20.0% |
| ! | GTTTGAATTGGAGAAATAAA+CGG | - | chr5_3:64282242-64282261 | Msa0824760:three_prime_UTR | 25.0% |
| !! | ATGTTTGAAAAAGTTTTGCT+TGG | - | chr5_3:64282418-64282437 | Msa0824760:CDS | 25.0% |
| !!! | GCTTGGTAGTTTTAATTATA+AGG | - | chr5_3:64282435-64282454 | Msa0824760:CDS | 25.0% |
| !! | ATAAAGTGTCTATGCTATAT+AGG | + | chr5_3:64282472-64282491 | None:intergenic | 25.0% |
| ! | CTTTATATTGTAGGTGTATT+TGG | - | chr5_3:64282486-64282505 | Msa0824760:CDS | 25.0% |
| ! | AATTCATCCAAATTTATGAG+AGG | - | chr5_3:64283274-64283293 | Msa0824760:CDS | 25.0% |
| ! | ATAGATTACTTAATGAGTCT+TGG | - | chr5_3:64283342-64283361 | Msa0824760:CDS | 25.0% |
| ! | TAGATTACTTAATGAGTCTT+GGG | - | chr5_3:64283343-64283362 | Msa0824760:CDS | 25.0% |
| !! | ATATAAGAAGAATCCTTTTG+AGG | - | chr5_3:64283379-64283398 | Msa0824760:CDS | 25.0% |
| ! | AGATATTTAATTGAGGAAGT+TGG | - | chr5_3:64283561-64283580 | Msa0824760:intron | 25.0% |
| ! | TTCCAAGAATAAATTTCCTA+AGG | - | chr5_3:64283772-64283791 | Msa0824760:intron | 25.0% |
| ! | TTTACCAAGTACAAATACTT+CGG | + | chr5_3:64284046-64284065 | None:intergenic | 25.0% |
| ! | AAATATTGTGCATATAGAGT+AGG | + | chr5_3:64284445-64284464 | None:intergenic | 25.0% |
| ! | AAATGATAGAATCCATAACT+TGG | + | chr5_3:64284677-64284696 | None:intergenic | 25.0% |
| ! | ATTATACAGTTCATCAATGA+AGG | + | chr5_3:64284707-64284726 | None:intergenic | 25.0% |
| !! | TTTTTGTATCTCAACTCAAT+TGG | - | chr5_3:64284775-64284794 | Msa0824760:CDS | 25.0% |
| ! | AATTGTCTATGTATCATGTA+TGG | + | chr5_3:64284823-64284842 | None:intergenic | 25.0% |
| ! | ATGTGTTACAAATTGTTTCA+GGG | + | chr5_3:64284854-64284873 | None:intergenic | 25.0% |
| AGAATGTTGAAAGGATTGTA+AGG | + | chr5_3:64281732-64281751 | None:intergenic | 30.0% | |
| !!! | CGATTGGTTTTGAGAATTTT+GGG | + | chr5_3:64281852-64281871 | None:intergenic | 30.0% |
| !!! | TCGATTGGTTTTGAGAATTT+TGG | + | chr5_3:64281853-64281872 | None:intergenic | 30.0% |
| ! | TGATGATGAAGATGAAGAAA+TGG | - | chr5_3:64281911-64281930 | Msa0824760:three_prime_UTR | 30.0% |
| TTGTGAAGTTGTGTTTGAAT+TGG | - | chr5_3:64282230-64282249 | Msa0824760:three_prime_UTR | 30.0% | |
| ATTGAACTTGTGTTGTATCT+AGG | - | chr5_3:64282325-64282344 | Msa0824760:CDS | 30.0% | |
| GCATAGACACTTTATATTGT+AGG | - | chr5_3:64282477-64282496 | Msa0824760:CDS | 30.0% | |
| TACAGATAGACAACAAGAAA+AGG | - | chr5_3:64282678-64282697 | Msa0824760:intron | 30.0% | |
| TAGACAACAAGAAAAGGAAA+AGG | - | chr5_3:64282684-64282703 | Msa0824760:intron | 30.0% | |
| AGACAACAAGAAAAGGAAAA+GGG | - | chr5_3:64282685-64282704 | Msa0824760:intron | 30.0% | |
| !!! | TGCACTGTTATTTTCTTGTA+AGG | + | chr5_3:64282770-64282789 | None:intergenic | 30.0% |
| ACAAGAAAATAACAGTGCAA+AGG | - | chr5_3:64282771-64282790 | Msa0824760:CDS | 30.0% | |
| !! | AACAGTGCAAAGGTATTAAA+TGG | - | chr5_3:64282781-64282800 | Msa0824760:CDS | 30.0% |
| ACTAATAAGAGGTCTAACAA+TGG | + | chr5_3:64282847-64282866 | None:intergenic | 30.0% | |
| !!! | TTTTGGGACTGAATATTGAT+TGG | - | chr5_3:64282962-64282981 | Msa0824760:CDS | 30.0% |
| ! | TTTGGGACTGAATATTGATT+GGG | - | chr5_3:64282963-64282982 | Msa0824760:CDS | 30.0% |
| TTTCAAGAATTTCGAGAGTT+TGG | + | chr5_3:64282994-64283013 | None:intergenic | 30.0% | |
| AAACTCTCGAAATTCTTGAA+AGG | - | chr5_3:64282993-64283012 | Msa0824760:CDS | 30.0% | |
| AACTCTCGAAATTCTTGAAA+GGG | - | chr5_3:64282994-64283013 | Msa0824760:CDS | 30.0% | |
| ! | AGATTCTTTTGGATGAGAAA+TGG | - | chr5_3:64283205-64283224 | Msa0824760:CDS | 30.0% |
| TTGTGATTCCTTAATTCCAA+AGG | + | chr5_3:64283256-64283275 | None:intergenic | 30.0% | |
| AATTAATGTATGTTCTGCAC+AGG | - | chr5_3:64283314-64283333 | Msa0824760:CDS | 30.0% | |
| AGATTACTTAATGAGTCTTG+GGG | - | chr5_3:64283344-64283363 | Msa0824760:CDS | 30.0% | |
| !! | AGCAATAATTTGCCCTATTT+TGG | + | chr5_3:64283487-64283506 | None:intergenic | 30.0% |
| CTCAACACTGTAAGAAAAAA+GGG | + | chr5_3:64283520-64283539 | None:intergenic | 30.0% | |
| TCTCAACACTGTAAGAAAAA+AGG | + | chr5_3:64283521-64283540 | None:intergenic | 30.0% | |
| GATGTTTCTTAACAAAGAGT+TGG | - | chr5_3:64283671-64283690 | Msa0824760:intron | 30.0% | |
| CTCCTTAGGAAATTTATTCT+TGG | + | chr5_3:64283777-64283796 | None:intergenic | 30.0% | |
| ! | ATAAATTTCCTAAGGAGCAT+AGG | - | chr5_3:64283780-64283799 | Msa0824760:intron | 30.0% |
| ATGCAAAAATAACCTGTGTA+AGG | + | chr5_3:64283842-64283861 | None:intergenic | 30.0% | |
| TGTTACAAGGATCAAACAAA+AGG | + | chr5_3:64283948-64283967 | None:intergenic | 30.0% | |
| TAACTGTTAGTCATGTTACA+AGG | + | chr5_3:64283961-64283980 | None:intergenic | 30.0% | |
| TGACAAAATGATTCATCAGT+TGG | + | chr5_3:64284214-64284233 | None:intergenic | 30.0% | |
| ! | CTGATGAATCATTTTGTCAA+CGG | - | chr5_3:64284215-64284234 | Msa0824760:CDS | 30.0% |
| ! | TAAACTAAAGTGCCAAGTTA+TGG | - | chr5_3:64284662-64284681 | Msa0824760:CDS | 30.0% |
| CATGTGTTACAAATTGTTTC+AGG | + | chr5_3:64284855-64284874 | None:intergenic | 30.0% | |
| GGAATTGGAAGAATGTTGAA+AGG | + | chr5_3:64281741-64281760 | None:intergenic | 35.0% | |
| !!! | GGTTTTGAGAATTTTGGGAT+TGG | + | chr5_3:64281847-64281866 | None:intergenic | 35.0% |
| TCTTCATCATCAGAGTCATA+CGG | + | chr5_3:64281903-64281922 | None:intergenic | 35.0% | |
| AACTTGTGTTGTATCTAGGA+CGG | - | chr5_3:64282329-64282348 | Msa0824760:CDS | 35.0% | |
| TCTTTGGCATTAAGATCAGT+AGG | + | chr5_3:64282365-64282384 | None:intergenic | 35.0% | |
| TGACTTCAATCTCTTGTCTT+TGG | + | chr5_3:64282381-64282400 | None:intergenic | 35.0% | |
| ACTAATTCACACACTGACAA+TGG | + | chr5_3:64282616-64282635 | None:intergenic | 35.0% | |
| ! | GATGCTATTCTCTGACTTTT+GGG | + | chr5_3:64282748-64282767 | None:intergenic | 35.0% |
| TTATTGAATGCCCAAAAGTC+AGG | - | chr5_3:64282930-64282949 | Msa0824760:CDS | 35.0% | |
| TATTGAATGCCCAAAAGTCA+GGG | - | chr5_3:64282931-64282950 | Msa0824760:CDS | 35.0% | |
| ! | ATAAAATGCCCCTGACTTTT+GGG | + | chr5_3:64282943-64282962 | None:intergenic | 35.0% |
| ! | AATAAAATGCCCCTGACTTT+TGG | + | chr5_3:64282944-64282963 | None:intergenic | 35.0% |
| !!! | AAGTCAGGGGCATTTTATTT+TGG | - | chr5_3:64282945-64282964 | Msa0824760:CDS | 35.0% |
| !!! | AGTCAGGGGCATTTTATTTT+GGG | - | chr5_3:64282946-64282965 | Msa0824760:CDS | 35.0% |
| GTAGTTTCGTAGAAATTCGA+TGG | - | chr5_3:64283155-64283174 | Msa0824760:CDS | 35.0% | |
| TTCGATGGAGAAAAGATATC+CGG | - | chr5_3:64283170-64283189 | Msa0824760:CDS | 35.0% | |
| ! | GTTGTCTGAAGAGATTCTTT+TGG | - | chr5_3:64283194-64283213 | Msa0824760:CDS | 35.0% |
| GTGCTTAAGTAATCAAGAAG+TGG | + | chr5_3:64283234-64283253 | None:intergenic | 35.0% | |
| CTTGATTACTTAAGCACCTT+TGG | - | chr5_3:64283237-64283256 | Msa0824760:CDS | 35.0% | |
| !! | CTTAAGCACCTTTGGAATTA+AGG | - | chr5_3:64283245-64283264 | Msa0824760:CDS | 35.0% |
| ACATGTGCCTCTCATAAATT+TGG | + | chr5_3:64283284-64283303 | None:intergenic | 35.0% | |
| !! | ACCACAACTTCTAGAATACA+CGG | - | chr5_3:64283404-64283423 | Msa0824760:CDS | 35.0% |
| ! | ACTCACGTTGCTTTCTTAAT+GGG | - | chr5_3:64283444-64283463 | Msa0824760:intron | 35.0% |
| !!! | ATTTGCCCTATTTTGGTACT+AGG | + | chr5_3:64283480-64283499 | None:intergenic | 35.0% |
| ACACTGTAAGAAAAAAGGGA+CGG | + | chr5_3:64283516-64283535 | None:intergenic | 35.0% | |
| TGGCATCAAGGAAAAAGATT+TGG | - | chr5_3:64283581-64283600 | Msa0824760:intron | 35.0% | |
| GGCATCAAGGAAAAAGATTT+GGG | - | chr5_3:64283582-64283601 | Msa0824760:intron | 35.0% | |
| ATACGTTGGACAAGAATTTG+AGG | + | chr5_3:64283627-64283646 | None:intergenic | 35.0% | |
| ! | TCCAACGTATTGACATTTCA+TGG | - | chr5_3:64283637-64283656 | Msa0824760:intron | 35.0% |
| TCCATGAAATGTCAATACGT+TGG | + | chr5_3:64283641-64283660 | None:intergenic | 35.0% | |
| ATCTTCACAATGCTCTCTTT+GGG | + | chr5_3:64283702-64283721 | None:intergenic | 35.0% | |
| !! | CTGCATTACAGTATTGATGA+TGG | - | chr5_3:64283744-64283763 | Msa0824760:intron | 35.0% |
| ! | TTTTCATTCCTATGCTCCTT+AGG | + | chr5_3:64283791-64283810 | None:intergenic | 35.0% |
| GAGCATAGGAATGAAAAATG+CGG | - | chr5_3:64283794-64283813 | Msa0824760:intron | 35.0% | |
| TTATTCTCCCTTTGCACAAA+AGG | - | chr5_3:64283876-64283895 | Msa0824760:CDS | 35.0% | |
| ! | AAAGCCGAAGTATTTGTACT+TGG | - | chr5_3:64284039-64284058 | Msa0824760:intron | 35.0% |
| GGTAAATGAACTTCACAATG+AGG | - | chr5_3:64284060-64284079 | Msa0824760:intron | 35.0% | |
| AAAGACAAGCTAAGGTACAT+CGG | + | chr5_3:64284106-64284125 | None:intergenic | 35.0% | |
| ! | TCTCTAAAGAAAGCTCCAAA+AGG | - | chr5_3:64284163-64284182 | Msa0824760:intron | 35.0% |
| ACTAAAGATCCAAGAGGAAA+TGG | + | chr5_3:64284190-64284209 | None:intergenic | 35.0% | |
| ! | ATGAATCATTTTGTCAACGG+TGG | - | chr5_3:64284218-64284237 | Msa0824760:CDS | 35.0% |
| ! | TGAATCATTTTGTCAACGGT+GGG | - | chr5_3:64284219-64284238 | Msa0824760:CDS | 35.0% |
| ! | ATTAATCCCTGTCTTATTGC+AGG | - | chr5_3:64284605-64284624 | Msa0824760:intron | 35.0% |
| GCATGATTAGAGGAAGGAAT+TGG | + | chr5_3:64281756-64281775 | None:intergenic | 40.0% | |
| ! | AGAAGCAGAAGCATGATTAG+AGG | + | chr5_3:64281766-64281785 | None:intergenic | 40.0% |
| ACCAATCGAAAATCACCCTA+TGG | - | chr5_3:64281864-64281883 | Msa0824760:three_prime_UTR | 40.0% | |
| ! | TCCATAGGGTGATTTTCGAT+TGG | + | chr5_3:64281868-64281887 | None:intergenic | 40.0% |
| ! | GGAGAGAGGAATTTTCCATA+GGG | + | chr5_3:64281882-64281901 | None:intergenic | 40.0% |
| TTGAAGTCAAAGACAGTTGC+AGG | - | chr5_3:64282392-64282411 | Msa0824760:CDS | 40.0% | |
| TGTCAGACACTAACACGTTA+TGG | + | chr5_3:64282515-64282534 | None:intergenic | 40.0% | |
| TTGAATGTAACCACACGAGT+CGG | + | chr5_3:64282543-64282562 | None:intergenic | 40.0% | |
| GGTGTGAGATCTCTTAACAA+TGG | - | chr5_3:64282706-64282725 | Msa0824760:intron | 40.0% | |
| ! | GGATGCTATTCTCTGACTTT+TGG | + | chr5_3:64282749-64282768 | None:intergenic | 40.0% |
| GCTGCAGTTATTGTGTGATT+AGG | - | chr5_3:64282886-64282905 | Msa0824760:CDS | 40.0% | |
| TTATTGTGTGATTAGGCAGC+AGG | - | chr5_3:64282893-64282912 | Msa0824760:CDS | 40.0% | |
| ATTGAATGCCCAAAAGTCAG+GGG | - | chr5_3:64282932-64282951 | Msa0824760:CDS | 40.0% | |
| !!! | ACCCACAACTCGAGTTTTTT+GGG | - | chr5_3:64283021-64283040 | Msa0824760:CDS | 40.0% |
| AGCACCACAGGTACATTAAT+TGG | + | chr5_3:64283100-64283119 | None:intergenic | 40.0% | |
| ! | TTAATGTACCTGTGGTGCTA+TGG | - | chr5_3:64283101-64283120 | Msa0824760:CDS | 40.0% |
| ATAAGATTCCATAGCACCAC+AGG | + | chr5_3:64283112-64283131 | None:intergenic | 40.0% | |
| AGAATCTCTTCAGACAACTC+CGG | + | chr5_3:64283192-64283211 | None:intergenic | 40.0% | |
| ATGTATGTTCTGCACAGGAA+AGG | - | chr5_3:64283319-64283338 | Msa0824760:CDS | 40.0% | |
| ! | ACCGTGTATTCTAGAAGTTG+TGG | + | chr5_3:64283408-64283427 | None:intergenic | 40.0% |
| !! | ACAACTTCTAGAATACACGG+TGG | - | chr5_3:64283407-64283426 | Msa0824760:CDS | 40.0% |
| ! | GACTCACGTTGCTTTCTTAA+TGG | - | chr5_3:64283443-64283462 | Msa0824760:intron | 40.0% |
| !! | GTTGCTTTCTTAATGGGCTT+GGG | - | chr5_3:64283450-64283469 | Msa0824760:intron | 40.0% |
| GCGTACCTAGTACCAAAATA+GGG | - | chr5_3:64283472-64283491 | Msa0824760:intron | 40.0% | |
| AATTGAGGAAGTTGGCATCA+AGG | - | chr5_3:64283569-64283588 | Msa0824760:intron | 40.0% | |
| CATCTTCACAATGCTCTCTT+TGG | + | chr5_3:64283703-64283722 | None:intergenic | 40.0% | |
| !! | CAAAGAGAGCATTGTGAAGA+TGG | - | chr5_3:64283701-64283720 | Msa0824760:intron | 40.0% |
| TACTGTAATGCAGAAGCTGA+GGG | + | chr5_3:64283737-64283756 | None:intergenic | 40.0% | |
| ATACTGTAATGCAGAAGCTG+AGG | + | chr5_3:64283738-64283757 | None:intergenic | 40.0% | |
| !! | AATCTTGACTAGCCTTACAC+AGG | - | chr5_3:64283827-64283846 | Msa0824760:CDS | 40.0% |
| ! | CCTTGTTCCTTTTGTGCAAA+GGG | + | chr5_3:64283886-64283905 | None:intergenic | 40.0% |
| ! | TCCTTGTTCCTTTTGTGCAA+AGG | + | chr5_3:64283887-64283906 | None:intergenic | 40.0% |
| GCACAAAAGGAACAAGGAAA+AGG | - | chr5_3:64283889-64283908 | Msa0824760:CDS | 40.0% | |
| AAGACAAGCTAAGGTACATC+GGG | + | chr5_3:64284105-64284124 | None:intergenic | 40.0% | |
| !! | GATGTACCTTAGCTTGTCTT+TGG | - | chr5_3:64284105-64284124 | Msa0824760:intron | 40.0% |
| GAAACCAAGAACTTATGACG+AGG | + | chr5_3:64284145-64284164 | None:intergenic | 40.0% | |
| GTTGGAACTAAAGATCCAAG+AGG | + | chr5_3:64284196-64284215 | None:intergenic | 40.0% | |
| !! | CACGAGTACTGGAAAATGAT+CGG | - | chr5_3:64284362-64284381 | Msa0824760:intron | 40.0% |
| TATAGAGTAGGCACATCACA+TGG | + | chr5_3:64284433-64284452 | None:intergenic | 40.0% | |
| ACTAAACAAGCTCACCTTTC+AGG | + | chr5_3:64284551-64284570 | None:intergenic | 40.0% | |
| GGTCACAAGTGTACAAAAAG+TGG | + | chr5_3:64284802-64284821 | None:intergenic | 40.0% | |
| ! | GCAGAAGCATGATTAGAGGA+AGG | + | chr5_3:64281762-64281781 | None:intergenic | 45.0% |
| ! | CGGAGAGAGGAATTTTCCAT+AGG | + | chr5_3:64281883-64281902 | None:intergenic | 45.0% |
| !!! | GACCCACAACTCGAGTTTTT+TGG | - | chr5_3:64283020-64283039 | Msa0824760:CDS | 45.0% |
| ! | CCCCAAAAAACTCGAGTTGT+GGG | + | chr5_3:64283025-64283044 | None:intergenic | 45.0% |
| !!! | CCCACAACTCGAGTTTTTTG+GGG | - | chr5_3:64283022-64283041 | Msa0824760:CDS | 45.0% |
| ! | TCCCCAAAAAACTCGAGTTG+TGG | + | chr5_3:64283026-64283045 | None:intergenic | 45.0% |
| GCAGCCAATTAATGTACCTG+TGG | - | chr5_3:64283093-64283112 | Msa0824760:CDS | 45.0% | |
| GAAGTTGTGGTTGCCTCAAA+AGG | + | chr5_3:64283395-64283414 | None:intergenic | 45.0% | |
| !! | CGTTGCTTTCTTAATGGGCT+TGG | - | chr5_3:64283449-64283468 | Msa0824760:intron | 45.0% |
| GGCGTACCTAGTACCAAAAT+AGG | - | chr5_3:64283471-64283490 | Msa0824760:intron | 45.0% | |
| CCCTTTGCACAAAAGGAACA+AGG | - | chr5_3:64283883-64283902 | Msa0824760:CDS | 45.0% | |
| ! | TTATTGACTACTGTGCCTGC+AGG | - | chr5_3:64283988-64284007 | Msa0824760:intron | 45.0% |
| !! | CGGCTTTAGATTAGCTTCCA+AGG | + | chr5_3:64284026-64284045 | None:intergenic | 45.0% |
| GTACATCGGGTATTTGGTCA+AGG | + | chr5_3:64284092-64284111 | None:intergenic | 45.0% | |
| GCTAAGGTACATCGGGTATT+TGG | + | chr5_3:64284098-64284117 | None:intergenic | 45.0% | |
| TCTGGTCCAAAGACAAGCTA+AGG | + | chr5_3:64284114-64284133 | None:intergenic | 45.0% | |
| TATGACGAGGACGAATTCTC+TGG | + | chr5_3:64284132-64284151 | None:intergenic | 45.0% | |
| TCGTCCTCGTCATAAGTTCT+TGG | - | chr5_3:64284138-64284157 | Msa0824760:intron | 45.0% | |
| ! | CCAAGAGGAAATGGTCCTTT+TGG | + | chr5_3:64284181-64284200 | None:intergenic | 45.0% |
| CCAAAAGGACCATTTCCTCT+TGG | - | chr5_3:64284178-64284197 | Msa0824760:intron | 45.0% | |
| CAATCAACTTGCACGAGTAC+TGG | - | chr5_3:64284351-64284370 | Msa0824760:intron | 45.0% | |
| !! | GCTGTTTCTGTTAGCCTGAA+AGG | - | chr5_3:64284534-64284553 | Msa0824760:intron | 45.0% |
| CCACAACCTGCAATAAGACA+GGG | + | chr5_3:64284614-64284633 | None:intergenic | 45.0% | |
| ACCACAACCTGCAATAAGAC+AGG | + | chr5_3:64284615-64284634 | None:intergenic | 45.0% | |
| CATCAGAGTCATACGGAGAG+AGG | + | chr5_3:64281896-64281915 | None:intergenic | 50.0% | |
| ! | TCATTTTGTCAACGGTGGGC+TGG | - | chr5_3:64284223-64284242 | Msa0824760:CDS | 50.0% |
| ! | CCCTGTCTTATTGCAGGTTG+TGG | - | chr5_3:64284611-64284630 | Msa0824760:CDS | 50.0% |
| !! | TGACACAACACCGACTCGTG+TGG | - | chr5_3:64282530-64282549 | Msa0824760:CDS | 55.0% |
| AGGACAGAGATAGCACCTGC+AGG | + | chr5_3:64284006-64284025 | None:intergenic | 55.0% | |
| ! | GCAGGTGCTATCTCTGTCCT+TGG | - | chr5_3:64284006-64284025 | Msa0824760:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 64281702 | 64284910 | 64281702 | ID=Msa0824760;Name=Msa0824760 |
| chr5_3 | mRNA | 64281702 | 64284910 | 64281702 | ID=Msa0824760-mRNA-1;Parent=Msa0824760;Name=Msa0824760-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|1|0.83|1|0.8|0.66|6|512|494 |
| chr5_3 | exon | 64281702 | 64281985 | 64281702 | ID=Msa0824760-mRNA-1:exon:20052;Parent=Msa0824760-mRNA-1 |
| chr5_3 | exon | 64282057 | 64282602 | 64282057 | ID=Msa0824760-mRNA-1:exon:20051;Parent=Msa0824760-mRNA-1 |
| chr5_3 | exon | 64282764 | 64283453 | 64282764 | ID=Msa0824760-mRNA-1:exon:20050;Parent=Msa0824760-mRNA-1 |
| chr5_3 | exon | 64283820 | 64283929 | 64283820 | ID=Msa0824760-mRNA-1:exon:20049;Parent=Msa0824760-mRNA-1 |
| chr5_3 | exon | 64284199 | 64284265 | 64284199 | ID=Msa0824760-mRNA-1:exon:20048;Parent=Msa0824760-mRNA-1 |
| chr5_3 | exon | 64284611 | 64284910 | 64284611 | ID=Msa0824760-mRNA-1:exon:20047;Parent=Msa0824760-mRNA-1 |
| chr5_3 | CDS | 64284611 | 64284910 | 64284611 | ID=Msa0824760-mRNA-1:cds;Parent=Msa0824760-mRNA-1 |
| chr5_3 | CDS | 64284199 | 64284265 | 64284199 | ID=Msa0824760-mRNA-1:cds;Parent=Msa0824760-mRNA-1 |
| chr5_3 | CDS | 64283820 | 64283929 | 64283820 | ID=Msa0824760-mRNA-1:cds;Parent=Msa0824760-mRNA-1 |
| chr5_3 | CDS | 64282764 | 64283453 | 64282764 | ID=Msa0824760-mRNA-1:cds;Parent=Msa0824760-mRNA-1 |
| chr5_3 | CDS | 64282285 | 64282602 | 64282285 | ID=Msa0824760-mRNA-1:cds;Parent=Msa0824760-mRNA-1 |
| chr5_3 | three_prime_UTR | 64282057 | 64282284 | 64282057 | ID=Msa0824760-mRNA-1:three_prime_utr;Parent=Msa0824760-mRNA-1 |
| chr5_3 | three_prime_UTR | 64281702 | 64281985 | 64281702 | ID=Msa0824760-mRNA-1:three_prime_utr;Parent=Msa0824760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
