Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0826120 | XP_003618039.1 | 99.263 | 407 | 2 | 1 | 1 | 406 | 1 | 407 | 0.0 | 806 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0826120 | sp|Q8S4Y1|THIC1_ARATH | 84.577 | 402 | 62 | 0 | 5 | 406 | 2 | 403 | 0.0 | 672 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0826120 | G7K0L3 | 99.263 | 407 | 2 | 1 | 1 | 406 | 1 | 407 | 0.0 | 806 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0775050 | Msa0826120 | 0.894699 | 1.928105e-75 | -8.615850e-47 |
| Msa0826120 | Msa1277390 | 0.813073 | 3.078817e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0826120 | MtrunA17_Chr3g0078111 | 99.263 | 407 | 2 | 1 | 1 | 406 | 1 | 407 | 0.0 | 806 |
| Msa0826120 | MtrunA17_Chr5g0448191 | 99.263 | 407 | 2 | 1 | 1 | 406 | 1 | 407 | 0.0 | 806 |
| Msa0826120 | MtrunA17_Chr4g0076421 | 77.078 | 397 | 76 | 1 | 10 | 406 | 2 | 383 | 0.0 | 626 |
| Msa0826120 | MtrunA17_Chr4g0010181 | 37.685 | 406 | 218 | 12 | 15 | 404 | 45 | 431 | 9.36e-65 | 213 |
| Msa0826120 | MtrunA17_Chr1g0169681 | 34.568 | 405 | 232 | 9 | 15 | 404 | 52 | 438 | 5.80e-58 | 196 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0826120 | AT5G48230.2 | 84.577 | 402 | 62 | 0 | 5 | 406 | 2 | 403 | 0.0 | 672 |
| Msa0826120 | AT5G47720.4 | 78.818 | 406 | 85 | 1 | 1 | 406 | 1 | 405 | 0.0 | 672 |
| Msa0826120 | AT5G47720.2 | 78.818 | 406 | 85 | 1 | 1 | 406 | 1 | 405 | 0.0 | 672 |
| Msa0826120 | AT5G47720.3 | 78.818 | 406 | 85 | 1 | 1 | 406 | 1 | 405 | 0.0 | 672 |
| Msa0826120 | AT5G47720.1 | 78.818 | 406 | 85 | 1 | 1 | 406 | 1 | 405 | 0.0 | 672 |
| Msa0826120 | AT5G48230.1 | 84.635 | 397 | 61 | 0 | 10 | 406 | 2 | 398 | 0.0 | 662 |
| Msa0826120 | AT5G47720.5 | 79.337 | 392 | 81 | 0 | 15 | 406 | 21 | 412 | 0.0 | 656 |
| Msa0826120 | AT1G04710.1 | 35.135 | 407 | 227 | 9 | 15 | 404 | 43 | 429 | 2.67e-63 | 210 |
| Msa0826120 | AT2G33150.1 | 34.783 | 414 | 241 | 8 | 4 | 404 | 40 | 437 | 1.08e-60 | 204 |
| Msa0826120 | AT5G48880.1 | 37.101 | 407 | 221 | 12 | 15 | 404 | 7 | 395 | 9.12e-60 | 200 |
| Msa0826120 | AT5G48880.3 | 37.101 | 407 | 221 | 12 | 15 | 404 | 50 | 438 | 1.27e-59 | 201 |
| Msa0826120 | AT5G48880.2 | 37.101 | 407 | 221 | 12 | 15 | 404 | 50 | 438 | 1.27e-59 | 201 |
| Msa0826120 | AT5G48880.4 | 37.101 | 407 | 221 | 12 | 15 | 404 | 50 | 438 | 1.27e-59 | 201 |
Find 202 sgRNAs with CRISPR-Local
Find 530 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAACTCATTGTTGAAATTT+TGG | 0.110619 | 5_3:-66268005 | None:intergenic |
| GAACGTCCTTAGTGCTAATT+TGG | 0.180846 | 5_3:+66270104 | Msa0826120:CDS |
| ATTAATCAAACGGTCGAAAT+AGG | 0.188299 | 5_3:+66268446 | Msa0826120:five_prime_UTR |
| AATGGATTACCTTAAGATTA+AGG | 0.196820 | 5_3:-66268776 | None:intergenic |
| TTCCCAGCGATAATTGATTT+TGG | 0.202086 | 5_3:+66268069 | Msa0826120:five_prime_UTR |
| GATATGTAGCTGCTCTTAAA+AGG | 0.206062 | 5_3:+66270040 | Msa0826120:intron |
| GGCATTGAAGCTTGGGCTTC+AGG | 0.214435 | 5_3:+66272899 | Msa0826120:CDS |
| GGAGAAAGGAATGAATAATT+AGG | 0.244780 | 5_3:-66268238 | None:intergenic |
| TCGTATCCTGGTAACACTTT+TGG | 0.258252 | 5_3:+66274419 | Msa0826120:CDS |
| CTTGCAAATCAGAAACTTCT+TGG | 0.274997 | 5_3:+66273277 | Msa0826120:CDS |
| AATTAGGGATTGAATTGAAT+TGG | 0.277197 | 5_3:-66268222 | None:intergenic |
| ATTGTGGAAGAAGTATTCTT+TGG | 0.277800 | 5_3:+66270081 | Msa0826120:CDS |
| ACCCAAAGTAACCACTTTCT+TGG | 0.286517 | 5_3:-66270770 | None:intergenic |
| ATTAGGGATTGAATTGAATT+GGG | 0.300359 | 5_3:-66268221 | None:intergenic |
| CCCTGCATTGGCAATAGCTT+TGG | 0.307145 | 5_3:-66273116 | None:intergenic |
| CCTTATGCTGGAAGCATTGC+CGG | 0.313728 | 5_3:-66271769 | None:intergenic |
| CCTGCATTGGCAATAGCTTT+GGG | 0.320450 | 5_3:-66273115 | None:intergenic |
| CAAAACAAAAGTCACGTTAA+AGG | 0.321503 | 5_3:+66275894 | Msa0826120:three_prime_UTR |
| ACACCAATGGGTGGGTTTCT+TGG | 0.326350 | 5_3:+66269889 | Msa0826120:CDS |
| TGCTGCGCAAAGTATTCAAT+TGG | 0.331118 | 5_3:+66270328 | Msa0826120:CDS |
| AATACTTCTTCCACAATTGC+TGG | 0.343408 | 5_3:-66270075 | None:intergenic |
| TTAATCAAACGGTCGAAATA+GGG | 0.344150 | 5_3:+66268447 | Msa0826120:five_prime_UTR |
| CAATCAGCACATTGATGGTT+TGG | 0.350816 | 5_3:-66268168 | None:intergenic |
| CCCAAGAAAGTGGTTACTTT+GGG | 0.367103 | 5_3:+66270769 | Msa0826120:CDS |
| TCCTTGTCAACAATTGTTGA+TGG | 0.368042 | 5_3:-66270834 | None:intergenic |
| AACGTCCTTAGTGCTAATTT+GGG | 0.374832 | 5_3:+66270105 | Msa0826120:CDS |
| TGGTGCTGCTGCATTAGTTT+TGG | 0.381346 | 5_3:+66272863 | Msa0826120:CDS |
| GACGACGGCGGCGCCGGTGG+AGG | 0.389406 | 5_3:-66267807 | None:intergenic |
| AGGTGGTGTGTGTAGTAGGA+TGG | 0.390106 | 5_3:-66267861 | None:intergenic |
| TTCATTCCTTTCTCCACCTC+AGG | 0.396717 | 5_3:+66268246 | Msa0826120:five_prime_UTR |
| CCAAGAGCAGCTTGTCTAGC+AGG | 0.397023 | 5_3:-66270135 | None:intergenic |
| ATGGATTACCTTAAGATTAA+GGG | 0.399153 | 5_3:-66268775 | None:intergenic |
| GAGAAGAGAAGTGGTTGGAA+TGG | 0.399306 | 5_3:+66268559 | Msa0826120:five_prime_UTR |
| TTGTGGAAGAAGTATTCTTT+GGG | 0.400326 | 5_3:+66270082 | Msa0826120:CDS |
| GGCGGCGCCGGTGGAGGGTG+AGG | 0.400850 | 5_3:-66267801 | None:intergenic |
| GAGAGAAGGCATTGAAGCTT+GGG | 0.409803 | 5_3:+66272892 | Msa0826120:CDS |
| AGAAGAGAAGTGGTTGGAAT+GGG | 0.410891 | 5_3:+66268560 | Msa0826120:five_prime_UTR |
| TGGTTTGTGGGATGTCTATA+AGG | 0.412478 | 5_3:+66270555 | Msa0826120:CDS |
| GTTAACAAAGTTTGTGCGTC+AGG | 0.413289 | 5_3:+66270192 | Msa0826120:CDS |
| CTTGCTTCTGCCAGGTACTT+AGG | 0.414540 | 5_3:-66270401 | None:intergenic |
| TCTGAGGTGGTGTGTGTAGT+AGG | 0.414679 | 5_3:-66267865 | None:intergenic |
| AACAACCACCCTTAATCTTA+AGG | 0.415742 | 5_3:+66268767 | Msa0826120:five_prime_UTR |
| ATCACTCCGGTTGAAGTCTC+TGG | 0.417791 | 5_3:+66270798 | Msa0826120:CDS |
| GCCCAAGAAAGTGGTTACTT+TGG | 0.418734 | 5_3:+66270768 | Msa0826120:CDS |
| CCCAAAGTAACCACTTTCTT+GGG | 0.420678 | 5_3:-66270769 | None:intergenic |
| TGCACAGATGTTTGTATCGT+TGG | 0.422469 | 5_3:+66269856 | Msa0826120:intron |
| GAGTACAATCAGCACATTGA+TGG | 0.422934 | 5_3:-66268173 | None:intergenic |
| GAGAAAGGAATGAATAATTA+GGG | 0.423518 | 5_3:-66268237 | None:intergenic |
| CCTGCTAGACAAGCTGCTCT+TGG | 0.430204 | 5_3:+66270135 | Msa0826120:CDS |
| GTATCATTGGGCCATCCTCT+TGG | 0.431528 | 5_3:+66274384 | Msa0826120:CDS |
| TGAAATTAATGAAGCCTTTG+CGG | 0.433981 | 5_3:+66273165 | Msa0826120:CDS |
| GAAACTTCTTGGACTAGATT+CGG | 0.439347 | 5_3:+66273288 | Msa0826120:CDS |
| GGAGCTGTTGTAAATAACTC+TGG | 0.441062 | 5_3:-66273079 | None:intergenic |
| CCCAAAGCTATTGCCAATGC+AGG | 0.447182 | 5_3:+66273115 | Msa0826120:CDS |
| CAAACTTCGACCAAGCTTCA+AGG | 0.448532 | 5_3:+66271725 | Msa0826120:CDS |
| TGGATATGCTGATGCTGCTC+AGG | 0.450989 | 5_3:+66272938 | Msa0826120:CDS |
| AGCTATTGCCAATGCAGGGC+TGG | 0.451948 | 5_3:+66273120 | Msa0826120:CDS |
| GAGAGGGACGACGGCGGCGC+CGG | 0.455831 | 5_3:-66267813 | None:intergenic |
| GGTGGTGTGTGTAGTAGGAT+GGG | 0.456717 | 5_3:-66267860 | None:intergenic |
| AAGTTATTTGACGGAGGAAG+CGG | 0.457904 | 5_3:-66267902 | None:intergenic |
| AGGGACGACGGCGGCGCCGG+TGG | 0.464928 | 5_3:-66267810 | None:intergenic |
| CGTTGTTGTGGCCGGTGGTA+TGG | 0.469342 | 5_3:+66270361 | Msa0826120:CDS |
| GGACACGATTCACTAGTTGA+TGG | 0.472023 | 5_3:+66270520 | Msa0826120:CDS |
| TATCCAAAATCAATTATCGC+TGG | 0.472739 | 5_3:-66268072 | None:intergenic |
| GGAGAGAAGGCATTGAAGCT+TGG | 0.472796 | 5_3:+66272891 | Msa0826120:CDS |
| ATATTGACCTTGCTTCTGCC+AGG | 0.474178 | 5_3:-66270409 | None:intergenic |
| CCGGCAATGCTTCCAGCATA+AGG | 0.477086 | 5_3:+66271769 | Msa0826120:CDS |
| TGGTCGAAGTTTGCGTAACT+TGG | 0.477342 | 5_3:-66271715 | None:intergenic |
| TAGAAGAGAAGAGAAGTGGT+TGG | 0.480999 | 5_3:+66268554 | Msa0826120:five_prime_UTR |
| TCTGTACCTGCCACCAAGCT+AGG | 0.481327 | 5_3:+66269922 | Msa0826120:CDS |
| TGAATATGAATTACTTTCAC+AGG | 0.483857 | 5_3:-66274974 | None:intergenic |
| TGAAGTCTCCAGCCCTGCAT+TGG | 0.486165 | 5_3:-66273128 | None:intergenic |
| GTTGACAAGGACGAGGGCCT+AGG | 0.486835 | 5_3:+66270846 | Msa0826120:CDS |
| ACAAGATATCAACCTTATGC+TGG | 0.493081 | 5_3:-66271781 | None:intergenic |
| CGGTTGAAGTCTCTGGTGGA+AGG | 0.493762 | 5_3:+66270805 | Msa0826120:CDS |
| CTTCCACCAGAGACTTCAAC+CGG | 0.493952 | 5_3:-66270804 | None:intergenic |
| GCAATCAGTAAGTTATTTGA+CGG | 0.494466 | 5_3:-66267911 | None:intergenic |
| GGTCTTCTCTTGTTATCGAA+TGG | 0.499232 | 5_3:-66270618 | None:intergenic |
| TTCAGGAAAGGATCCCGCCT+TGG | 0.504376 | 5_3:+66270499 | Msa0826120:intron |
| AGACAAGCTGCTCTTGGAGC+AGG | 0.505123 | 5_3:+66270141 | Msa0826120:CDS |
| CGACCAAGCTTCAAGGAGAC+TGG | 0.505206 | 5_3:+66271732 | Msa0826120:CDS |
| GAGTTAAACAAGAAGGAAAG+AGG | 0.505273 | 5_3:-66268737 | None:intergenic |
| CGATGATGAAGAGAGGAAGA+AGG | 0.505277 | 5_3:-66267775 | None:intergenic |
| AACGGTCGAAATAGGGGTAA+AGG | 0.505647 | 5_3:+66268454 | Msa0826120:five_prime_UTR |
| CCTCCAGTCTCCTTGAAGCT+TGG | 0.506596 | 5_3:-66271735 | None:intergenic |
| CTAGGCTCGATAGCTATTGA+AGG | 0.507513 | 5_3:+66269940 | Msa0826120:CDS |
| TGATTTGAGTGTTTAAATAG+TGG | 0.507773 | 5_3:-66268667 | None:intergenic |
| AAGAAAGTGGTTACTTTGGG+TGG | 0.508659 | 5_3:+66270772 | Msa0826120:CDS |
| ACGACGGCGGCGCCGGTGGA+GGG | 0.510099 | 5_3:-66267806 | None:intergenic |
| GGTGTTTGCAACGGAGGAGG+TGG | 0.510695 | 5_3:+66274927 | Msa0826120:CDS |
| GCTTTGGGGATGGCAATGGC+TGG | 0.511880 | 5_3:-66273100 | None:intergenic |
| GTTGAAAGAGTTAAACAAGA+AGG | 0.514879 | 5_3:-66268744 | None:intergenic |
| TAGTGAATCGTGTCCAAGGC+GGG | 0.514939 | 5_3:-66270512 | None:intergenic |
| TGGTGTTGCACGTACACCAA+TGG | 0.516183 | 5_3:+66269876 | Msa0826120:CDS |
| TTGCAGTGGTGCTCGTATCC+TGG | 0.516892 | 5_3:+66274407 | Msa0826120:CDS |
| GACACGATTCACTAGTTGAT+GGG | 0.517196 | 5_3:+66270521 | Msa0826120:CDS |
| AATAGCTATCGAGCCTAGCT+TGG | 0.518026 | 5_3:-66269935 | None:intergenic |
| GGCCATCCTCTTGGTTGCAG+TGG | 0.525412 | 5_3:+66274393 | Msa0826120:CDS |
| CAATGTTGATCCAGCAATTG+TGG | 0.526777 | 5_3:+66270065 | Msa0826120:CDS |
| GCTGCGCAAAGTATTCAATT+GGG | 0.527113 | 5_3:+66270329 | Msa0826120:CDS |
| TGGATGCCTCAACGGTGCCG+AGG | 0.527761 | 5_3:-66268196 | None:intergenic |
| TGGTGCATCTGCCCTTGTTG+TGG | 0.528344 | 5_3:+66274947 | Msa0826120:CDS |
| TATATACCTGAGGTGGAGAA+AGG | 0.529139 | 5_3:-66268252 | None:intergenic |
| GATGTTGAAAGATGGTTTGT+GGG | 0.529197 | 5_3:+66270543 | Msa0826120:CDS |
| GGATGTTGAAAGATGGTTTG+TGG | 0.529632 | 5_3:+66270542 | Msa0826120:CDS |
| CACAATTGCTGGATCAACAT+TGG | 0.530049 | 5_3:-66270064 | None:intergenic |
| GGAATTTCTGCCCAAGAAAG+TGG | 0.530213 | 5_3:+66270759 | Msa0826120:CDS |
| TTAAATAGTGGCGTGCGTGT+AGG | 0.531508 | 5_3:-66268655 | None:intergenic |
| ACATGGTGGAGCTGTATCAT+TGG | 0.532197 | 5_3:+66274371 | Msa0826120:CDS |
| ATATGTAGCTGCTCTTAAAA+GGG | 0.533700 | 5_3:+66270041 | Msa0826120:intron |
| TTTCCATCGATCAATGGCTC+CGG | 0.534726 | 5_3:+66269408 | Msa0826120:exon |
| ATTGGGCGATTACCTTTCCT+AGG | 0.536501 | 5_3:-66270863 | None:intergenic |
| GTTGAAGTCTCTGGTGGAAG+GGG | 0.537975 | 5_3:+66270807 | Msa0826120:CDS |
| GTAACGTAAGATTAATCAAA+CGG | 0.538189 | 5_3:+66268436 | Msa0826120:five_prime_UTR |
| ATCCAAAATCAATTATCGCT+GGG | 0.538490 | 5_3:-66268071 | None:intergenic |
| TTAGGGATTGAATTGAATTG+GGG | 0.542080 | 5_3:-66268220 | None:intergenic |
| TGGGATGTCTATAAGGATGT+AGG | 0.542446 | 5_3:+66270562 | Msa0826120:CDS |
| GCCATTAATTCCTACCGCAA+AGG | 0.542812 | 5_3:-66273179 | None:intergenic |
| ATGATGAAGAGAGGAAGAAG+GGG | 0.544362 | 5_3:-66267773 | None:intergenic |
| GATGATGAAGAGAGGAAGAA+GGG | 0.546577 | 5_3:-66267774 | None:intergenic |
| AATAAAATATATACCTGAGG+TGG | 0.547743 | 5_3:-66268259 | None:intergenic |
| ATCGCTGCCTCACCCTCCAC+CGG | 0.548495 | 5_3:+66267794 | Msa0826120:five_prime_UTR |
| GTCTATAAGGATGTAGGCAT+GGG | 0.549198 | 5_3:+66270568 | Msa0826120:CDS |
| AAATTAGAAGAGAAGAGAAG+TGG | 0.549939 | 5_3:+66268550 | Msa0826120:five_prime_UTR |
| CTTTGGGTGGGAAATCACTC+CGG | 0.551515 | 5_3:+66270785 | Msa0826120:CDS |
| TGTCTATAAGGATGTAGGCA+TGG | 0.552330 | 5_3:+66270567 | Msa0826120:CDS |
| GGTTGAAGTCTCTGGTGGAA+GGG | 0.553470 | 5_3:+66270806 | Msa0826120:CDS |
| GGTGTTGCACGTACACCAAT+GGG | 0.554411 | 5_3:+66269877 | Msa0826120:CDS |
| TCGAAATAGGGGTAAAGGCA+TGG | 0.555699 | 5_3:+66268459 | Msa0826120:five_prime_UTR |
| CACCACTGCAACCAAGAGGA+TGG | 0.555857 | 5_3:-66274395 | None:intergenic |
| GTTTGTGCGTCAGGAATGAA+AGG | 0.559395 | 5_3:+66270201 | Msa0826120:CDS |
| GGTGGTGTTTGCAACGGAGG+AGG | 0.560817 | 5_3:+66274924 | Msa0826120:CDS |
| GGATGCCTCAACGGTGCCGA+GGG | 0.561241 | 5_3:-66268195 | None:intergenic |
| GTTGATGGGATGTTGAAAGA+TGG | 0.562395 | 5_3:+66270535 | Msa0826120:CDS |
| AAAGAGGAAATGAATGAGGA+GGG | 0.562602 | 5_3:-66268721 | None:intergenic |
| AAGGAAAGAGGAAATGAATG+AGG | 0.563310 | 5_3:-66268725 | None:intergenic |
| TAATCAAACGGTCGAAATAG+GGG | 0.564952 | 5_3:+66268448 | Msa0826120:five_prime_UTR |
| AATAGCTTTGGGGATGGCAA+TGG | 0.565250 | 5_3:-66273104 | None:intergenic |
| ATGTGCTGATTGTACTCCCT+CGG | 0.569432 | 5_3:+66268179 | Msa0826120:five_prime_UTR |
| CATGGTGGAGCTGTATCATT+GGG | 0.570697 | 5_3:+66274372 | Msa0826120:CDS |
| CAGGCAAAAGTAAATGTACA+TGG | 0.572291 | 5_3:+66274354 | Msa0826120:intron |
| AGAAAGTGGTTACTTTGGGT+GGG | 0.573060 | 5_3:+66270773 | Msa0826120:CDS |
| CAACTAGTGAATCGTGTCCA+AGG | 0.573234 | 5_3:-66270516 | None:intergenic |
| ATAAATGACGTTGTTGTGGC+CGG | 0.573486 | 5_3:+66270353 | Msa0826120:CDS |
| GAAAGAGGAAATGAATGAGG+AGG | 0.575915 | 5_3:-66268722 | None:intergenic |
| AATGGAAAGTACGGTGTAGG+TGG | 0.576859 | 5_3:+66274906 | Msa0826120:CDS |
| GAGCTGTTGTAAATAACTCT+GGG | 0.576934 | 5_3:-66273078 | None:intergenic |
| ATGACCTCTAGGCTGTATAG+AGG | 0.580039 | 5_3:-66269446 | None:intergenic |
| AGCTATCGAGCCTAGCTTGG+TGG | 0.583813 | 5_3:-66269932 | None:intergenic |
| AAAAGTCACGTTAAAGGCAG+AGG | 0.589486 | 5_3:+66275900 | Msa0826120:three_prime_UTR |
| CACGCACGTGTAAAATCACT+CGG | 0.590173 | 5_3:+66268397 | Msa0826120:five_prime_UTR |
| CTGCCGGAGCCATTGATCGA+TGG | 0.591737 | 5_3:-66269411 | None:intergenic |
| GAGGAGTCTGAAGATGCTGC+CGG | 0.592288 | 5_3:-66269427 | None:intergenic |
| TTCACAGGAGCTCCACAACA+AGG | 0.592999 | 5_3:-66274959 | None:intergenic |
| ATCGAGCCTAGCTTGGTGGC+AGG | 0.593460 | 5_3:-66269928 | None:intergenic |
| CTGCATTGGCAATAGCTTTG+GGG | 0.597611 | 5_3:-66273114 | None:intergenic |
| GTAGGTGGTGTTTGCAACGG+AGG | 0.598679 | 5_3:+66274921 | Msa0826120:CDS |
| CTTGCCCCAAATTAGCACTA+AGG | 0.599342 | 5_3:-66270110 | None:intergenic |
| ACTCCGGTTGAAGTCTCTGG+TGG | 0.599869 | 5_3:+66270801 | Msa0826120:CDS |
| TGATGAAGAGAGGAAGAAGG+GGG | 0.601668 | 5_3:-66267772 | None:intergenic |
| GATGGGGATAACGCCGTCGG+TGG | 0.602904 | 5_3:-66267843 | None:intergenic |
| CCGTCGGTGGTTGAGAAGAG+AGG | 0.603296 | 5_3:-66267830 | None:intergenic |
| CAAGGACGAGGGCCTAGGAA+AGG | 0.607320 | 5_3:+66270851 | Msa0826120:CDS |
| GTACTCCCTCGGCACCGTTG+AGG | 0.607806 | 5_3:+66268190 | Msa0826120:five_prime_UTR |
| GTACCAAGAAACCCACCCAT+TGG | 0.608246 | 5_3:-66269892 | None:intergenic |
| AACAATTGTTGACAAGGACG+AGG | 0.609353 | 5_3:+66270839 | Msa0826120:CDS |
| ATTGGCAATAGCTTTGGGGA+TGG | 0.613894 | 5_3:-66273110 | None:intergenic |
| GATTACCTTAAGATTAAGGG+TGG | 0.615399 | 5_3:-66268772 | None:intergenic |
| GTCTAGTGTACCTAAGTACC+TGG | 0.616573 | 5_3:+66270391 | Msa0826120:CDS |
| ACTGGAGGCTCTGTTACTGC+CGG | 0.620647 | 5_3:+66271750 | Msa0826120:CDS |
| GTGGTGTGTGTAGTAGGATG+GGG | 0.621702 | 5_3:-66267859 | None:intergenic |
| CTAAGTACCTGGCAGAAGCA+AGG | 0.621882 | 5_3:+66270402 | Msa0826120:CDS |
| CCAAAGCTATTGCCAATGCA+GGG | 0.624619 | 5_3:+66273116 | Msa0826120:CDS |
| GGTGTAGGTGGTGTTTGCAA+CGG | 0.625440 | 5_3:+66274918 | Msa0826120:CDS |
| ATCAGTAAGTTATTTGACGG+AGG | 0.629088 | 5_3:-66267908 | None:intergenic |
| TTCGATAACAAGAGAAGACC+AGG | 0.630164 | 5_3:+66270621 | Msa0826120:CDS |
| ACCATCAACAATTGTTGACA+AGG | 0.631110 | 5_3:+66270833 | Msa0826120:CDS |
| TTGCACGTACACCAATGGGT+GGG | 0.631141 | 5_3:+66269881 | Msa0826120:CDS |
| TAGGGATTGAATTGAATTGG+GGG | 0.631763 | 5_3:-66268219 | None:intergenic |
| GCCGAAGTTGAGTTCTGAGG+TGG | 0.632443 | 5_3:-66267878 | None:intergenic |
| GGGCATAAATGACGTTGTTG+TGG | 0.634678 | 5_3:+66270349 | Msa0826120:CDS |
| GTTGCACGTACACCAATGGG+TGG | 0.635819 | 5_3:+66269880 | Msa0826120:CDS |
| GAGGCAGCGATGATGAAGAG+AGG | 0.645945 | 5_3:-66267782 | None:intergenic |
| CCTCTCTTCTCAACCACCGA+CGG | 0.646182 | 5_3:+66267830 | Msa0826120:five_prime_UTR |
| AATGACGTTGTTGTGGCCGG+TGG | 0.650291 | 5_3:+66270356 | Msa0826120:CDS |
| GGCGCCGAAGTTGAGTTCTG+AGG | 0.650392 | 5_3:-66267881 | None:intergenic |
| CGTCGGTGGTTGAGAAGAGA+GGG | 0.653384 | 5_3:-66267829 | None:intergenic |
| TGAGAAGAGAGGGACGACGG+CGG | 0.654401 | 5_3:-66267819 | None:intergenic |
| TTGAGCGTGTAACTCGTGGG+TGG | 0.654528 | 5_3:+66268627 | Msa0826120:five_prime_UTR |
| ACCACCTCAGAACTCAACTT+CGG | 0.656147 | 5_3:+66267877 | Msa0826120:five_prime_UTR |
| CGAGCACCACTGCAACCAAG+AGG | 0.657848 | 5_3:-66274399 | None:intergenic |
| ACGTCCTTAGTGCTAATTTG+GGG | 0.662324 | 5_3:+66270106 | Msa0826120:CDS |
| GGTTGAGAAGAGAGGGACGA+CGG | 0.663314 | 5_3:-66267822 | None:intergenic |
| CCAAGCTTCAAGGAGACTGG+AGG | 0.663840 | 5_3:+66271735 | Msa0826120:CDS |
| TCACAGGAGCTCCACAACAA+GGG | 0.671465 | 5_3:-66274958 | None:intergenic |
| ACAATTGTTGACAAGGACGA+GGG | 0.682480 | 5_3:+66270840 | Msa0826120:CDS |
| GCAAAAGTAAATGTACATGG+TGG | 0.690007 | 5_3:+66274357 | Msa0826120:CDS |
| TAGGATGGGGATAACGCCGT+CGG | 0.699879 | 5_3:-66267846 | None:intergenic |
| CTAGTGAATCGTGTCCAAGG+CGG | 0.721205 | 5_3:-66270513 | None:intergenic |
| AAATAGGGGTAAAGGCATGG+TGG | 0.728156 | 5_3:+66268462 | Msa0826120:five_prime_UTR |
| GACTCCTCTATACAGCCTAG+AGG | 0.751586 | 5_3:+66269442 | Msa0826120:CDS |
| ACGTTACAGATCATGACACG+TGG | 0.769946 | 5_3:-66268420 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATAAATTTTAAATATTT+GGG | - | chr5_3:66270985-66271004 | None:intergenic | 0.0% |
| !!! | TTTAATAAATTTTAAATATT+TGG | - | chr5_3:66270986-66271005 | None:intergenic | 0.0% |
| !!! | ATTTTGAAACAATTTTTTTT+TGG | + | chr5_3:66275654-66275673 | Msa0826120:intron | 10.0% |
| !! | TAAAATAAAATATATACCTG+AGG | - | chr5_3:66268265-66268284 | None:intergenic | 15.0% |
| !!! | ATCTGATTCATTTAAATTTT+TGG | + | chr5_3:66269501-66269520 | Msa0826120:intron | 15.0% |
| !! | TCAACAAAAATCTAATATAA+TGG | - | chr5_3:66270688-66270707 | None:intergenic | 15.0% |
| !!! | ATAACTTTTTTATACATCTA+TGG | + | chr5_3:66271574-66271593 | Msa0826120:intron | 15.0% |
| !! | GAAAAAAGATATCAATATAT+TGG | - | chr5_3:66271670-66271689 | None:intergenic | 15.0% |
| !!! | TTTTTTGGTAATAAAATACA+TGG | + | chr5_3:66271882-66271901 | Msa0826120:intron | 15.0% |
| !!! | GTTCAATGTTAATTTTTTTT+AGG | + | chr5_3:66271932-66271951 | Msa0826120:intron | 15.0% |
| !! | AAAACCAAAAAATAAGTTAA+GGG | + | chr5_3:66272199-66272218 | Msa0826120:intron | 15.0% |
| !! | GAAACAAAAAAATAAGTTAA+GGG | + | chr5_3:66272230-66272249 | Msa0826120:intron | 15.0% |
| !! | GAAACAAAAAAATAAGTTAA+GGG | + | chr5_3:66272230-66272249 | Msa0826120:intron | 15.0% |
| !! | AATTTATTAACGTTACAATT+TGG | - | chr5_3:66272348-66272367 | None:intergenic | 15.0% |
| !! | ATTGTAACGTTAATAAATTA+TGG | + | chr5_3:66272349-66272368 | Msa0826120:intron | 15.0% |
| !! | TTGTAACGTTAATAAATTAT+GGG | + | chr5_3:66272350-66272369 | Msa0826120:intron | 15.0% |
| !!! | TTATATTTTGATAAACCTAT+TGG | + | chr5_3:66272546-66272565 | Msa0826120:intron | 15.0% |
| !! | AATAGTTATTCATTAGTAAA+AGG | - | chr5_3:66274285-66274304 | None:intergenic | 15.0% |
| !!! | CTTGTTTTTCATTATTTATT+GGG | - | chr5_3:66275352-66275371 | None:intergenic | 15.0% |
| !! | TTTATCATCAATATTCAATT+TGG | - | chr5_3:66275734-66275753 | None:intergenic | 15.0% |
| !!! | TTTTTTTTAATCTTTGAAAG+TGG | + | chr5_3:66275774-66275793 | Msa0826120:three_prime_UTR | 15.0% |
| !!! | TTAACTCATTGTTGAAATTT+TGG | - | chr5_3:66268008-66268027 | None:intergenic | 20.0% |
| !!! | TAAATGCTTCTTTAAAACAA+AGG | + | chr5_3:66268341-66268360 | Msa0826120:intron | 20.0% |
| !! | TTGTATATGTTATGATCAAA+AGG | + | chr5_3:66268990-66269009 | Msa0826120:intron | 20.0% |
| !!! | TATTAAACTTGTTCATTCAT+CGG | - | chr5_3:66270276-66270295 | None:intergenic | 20.0% |
| !! | AAAAATTCTTTAACACTATC+AGG | + | chr5_3:66271120-66271139 | Msa0826120:intron | 20.0% |
| !!! | ATTTTGAGGACATTATATTA+AGG | - | chr5_3:66271172-66271191 | None:intergenic | 20.0% |
| !! | AATATAATGTCCTCAAAATA+AGG | + | chr5_3:66271173-66271192 | Msa0826120:intron | 20.0% |
| !! | ATATAATGTCCTCAAAATAA+GGG | + | chr5_3:66271174-66271193 | Msa0826120:intron | 20.0% |
| !!! | TAGTAGTAATCAAATTTTGA+TGG | - | chr5_3:66271200-66271219 | None:intergenic | 20.0% |
| !! | ATAAAAAAGTTATGCAGAAA+CGG | - | chr5_3:66271567-66271586 | None:intergenic | 20.0% |
| !!! | GGATATTTTTGTCAATTTTT+TGG | + | chr5_3:66271867-66271886 | Msa0826120:intron | 20.0% |
| !! | TTTAGGCTTAATTAATGATT+TGG | + | chr5_3:66271949-66271968 | Msa0826120:intron | 20.0% |
| !! | TTGTAACGTTAATAACTTAT+GGG | - | chr5_3:66272007-66272026 | None:intergenic | 20.0% |
| !! | ATTGTAACGTTAATAACTTA+TGG | - | chr5_3:66272008-66272027 | None:intergenic | 20.0% |
| !! | AAGTTATTAACGTTACAATT+TGG | + | chr5_3:66272009-66272028 | Msa0826120:intron | 20.0% |
| !!! | ACGAAACTTTTAATAGTTAA+GGG | - | chr5_3:66272290-66272309 | None:intergenic | 20.0% |
| !!! | AACGAAACTTTTAATAGTTA+AGG | - | chr5_3:66272289-66272308 | None:intergenic | 20.0% |
| !!! | AACTATTAAAAGTTTCGTTT+TGG | + | chr5_3:66272069-66272088 | Msa0826120:intron | 20.0% |
| !! | GAAACCAAAAATTAAGTTAA+GGG | - | chr5_3:66272096-66272115 | None:intergenic | 20.0% |
| !!! | CTTATTTTTTGGTTTTGTTT+TGG | - | chr5_3:66272195-66272214 | None:intergenic | 20.0% |
| !! | CAAAACCAAAAAATAAGTTA+AGG | + | chr5_3:66272198-66272217 | Msa0826120:intron | 20.0% |
| !!! | CTTATTTTTTTGTTTCGTTT+TGG | - | chr5_3:66272226-66272245 | None:intergenic | 20.0% |
| !! | CGAAACAAAAAAATAAGTTA+AGG | + | chr5_3:66272229-66272248 | Msa0826120:intron | 20.0% |
| !!! | CTTATTTTTTTGTTTCGTTT+TGG | - | chr5_3:66272226-66272245 | None:intergenic | 20.0% |
| !! | CGAAACAAAAAAATAAGTTA+AGG | + | chr5_3:66272229-66272248 | Msa0826120:intron | 20.0% |
| !!! | AACTATTAAAAGTTTCGTTT+TGG | - | chr5_3:66272069-66272088 | None:intergenic | 20.0% |
| !!! | AACGAAACTTTTAATAGTTA+AGG | + | chr5_3:66272289-66272308 | Msa0826120:intron | 20.0% |
| !!! | ACGAAACTTTTAATAGTTAA+GGG | + | chr5_3:66272290-66272309 | Msa0826120:intron | 20.0% |
| !! | TCAACTCTCAATAAAAAAAA+AGG | - | chr5_3:66272425-66272444 | None:intergenic | 20.0% |
| !!! | AGTTTATCAATTTTAGTGAA+TGG | + | chr5_3:66272504-66272523 | Msa0826120:intron | 20.0% |
| !!! | TTCATTTTCATTAAAAACCA+AGG | - | chr5_3:66272823-66272842 | None:intergenic | 20.0% |
| !!! | ATTTGTAGTGTTTTATATGT+TGG | + | chr5_3:66273015-66273034 | Msa0826120:intron | 20.0% |
| !! | TAACATGCCATAAATAATTA+AGG | + | chr5_3:66273623-66273642 | Msa0826120:intron | 20.0% |
| !!! | TCTTTGAAAAACAATATGAA+GGG | - | chr5_3:66273795-66273814 | None:intergenic | 20.0% |
| !!! | AGTTTTGGAATGTTAAAAAT+TGG | - | chr5_3:66273877-66273896 | None:intergenic | 20.0% |
| !! | TGTAGTTTCTCAAAATTTAT+TGG | - | chr5_3:66273933-66273952 | None:intergenic | 20.0% |
| !! | TTACATAGTTAAACTTAACA+AGG | - | chr5_3:66274026-66274045 | None:intergenic | 20.0% |
| !!! | ATATTTGTATTTTGCATGTT+AGG | + | chr5_3:66274045-66274064 | Msa0826120:intron | 20.0% |
| !! | AATTCTGTTTGTAATAAAGT+GGG | - | chr5_3:66274078-66274097 | None:intergenic | 20.0% |
| !! | TAATTCTGTTTGTAATAAAG+TGG | - | chr5_3:66274079-66274098 | None:intergenic | 20.0% |
| !! | AAACAAAATAATTCATGATG+AGG | - | chr5_3:66274163-66274182 | None:intergenic | 20.0% |
| !!! | TTTTGTTTGGATCAATATAT+TGG | - | chr5_3:66274217-66274236 | None:intergenic | 20.0% |
| !!! | GAAAAATAATAGCTTTTGTT+TGG | - | chr5_3:66274230-66274249 | None:intergenic | 20.0% |
| !!! | AAAAGCTATTATTTTTCATC+AGG | + | chr5_3:66274233-66274252 | Msa0826120:intron | 20.0% |
| !! | TGCAAAATAATAGTTATTTG+AGG | - | chr5_3:66274336-66274355 | None:intergenic | 20.0% |
| !!! | TCAAATAACTATTATTTTGC+AGG | + | chr5_3:66274335-66274354 | Msa0826120:intron | 20.0% |
| !! | ATGATATACATAAGTTCATA+TGG | + | chr5_3:66274750-66274769 | Msa0826120:intron | 20.0% |
| !! | TTTAGACTAATTGAATCAAA+AGG | - | chr5_3:66274856-66274875 | None:intergenic | 20.0% |
| !!! | GCTTGTTTTTCATTATTTAT+TGG | - | chr5_3:66275353-66275372 | None:intergenic | 20.0% |
| !!! | TTTAAGTTTGTCTTTTTCTT+GGG | - | chr5_3:66275535-66275554 | None:intergenic | 20.0% |
| !!! | TTTTAAGTTTGTCTTTTTCT+TGG | - | chr5_3:66275536-66275555 | None:intergenic | 20.0% |
| !!! | GTTTTATTGAAAATGTAAAG+TGG | + | chr5_3:66275626-66275645 | Msa0826120:intron | 20.0% |
| !! | ATACTTATCATAACACTAAT+TGG | + | chr5_3:66275691-66275710 | Msa0826120:intron | 20.0% |
| !! | TACTTATCATAACACTAATT+GGG | + | chr5_3:66275692-66275711 | Msa0826120:intron | 20.0% |
| !!! | ACTTGTTTTTTTGTTTTTCT+GGG | - | chr5_3:66275850-66275869 | None:intergenic | 20.0% |
| !!! | TACTTGTTTTTTTGTTTTTC+TGG | - | chr5_3:66275851-66275870 | None:intergenic | 20.0% |
| ! | ATTAGGGATTGAATTGAATT+GGG | - | chr5_3:66268224-66268243 | None:intergenic | 25.0% |
| ! | AATTAGGGATTGAATTGAAT+TGG | - | chr5_3:66268225-66268244 | None:intergenic | 25.0% |
| ! | GAGAAAGGAATGAATAATTA+GGG | - | chr5_3:66268240-66268259 | None:intergenic | 25.0% |
| ! | AATAAAATATATACCTGAGG+TGG | - | chr5_3:66268262-66268281 | None:intergenic | 25.0% |
| ! | GTAACGTAAGATTAATCAAA+CGG | + | chr5_3:66268436-66268455 | Msa0826120:five_prime_UTR | 25.0% |
| ! | TGATTTGAGTGTTTAAATAG+TGG | - | chr5_3:66268670-66268689 | None:intergenic | 25.0% |
| !! | ATGGATTACCTTAAGATTAA+GGG | - | chr5_3:66268778-66268797 | None:intergenic | 25.0% |
| !!! | AATGGATTACCTTAAGATTA+AGG | - | chr5_3:66268779-66268798 | None:intergenic | 25.0% |
| ! | ATGTTATGATCAAAAGGAAA+AGG | + | chr5_3:66268996-66269015 | Msa0826120:intron | 25.0% |
| ! | AAGTACTTAATTTCTTAGTG+TGG | - | chr5_3:66269155-66269174 | None:intergenic | 25.0% |
| !! | AACCATTTTATTCGAGAAAT+TGG | + | chr5_3:66269190-66269209 | Msa0826120:intron | 25.0% |
| !! | ACCATTTTATTCGAGAAATT+GGG | + | chr5_3:66269191-66269210 | Msa0826120:intron | 25.0% |
| ! | TGAATCTGTCATTAAAAACA+TGG | - | chr5_3:66269387-66269406 | None:intergenic | 25.0% |
| ! | AAATGAATCAGATAAATGCT+AGG | - | chr5_3:66269494-66269513 | None:intergenic | 25.0% |
| !! | TCTTTAATGATTTTGCCTAA+TGG | - | chr5_3:66269553-66269572 | None:intergenic | 25.0% |
| ! | TCAAAATTAAACTCTTCTCA+TGG | + | chr5_3:66269796-66269815 | Msa0826120:intron | 25.0% |
| ! | AGAAGATCAACTAAAATGAA+AGG | - | chr5_3:66269826-66269845 | None:intergenic | 25.0% |
| ! | TGATTCAATGCTAAAATTTC+AGG | + | chr5_3:66270482-66270501 | Msa0826120:intron | 25.0% |
| !! | ATTTCTGTTCAAATTGGTTT+CGG | + | chr5_3:66270657-66270676 | Msa0826120:intron | 25.0% |
| !! | GTAAGTTTAAGATTTACATG+TGG | - | chr5_3:66271372-66271391 | None:intergenic | 25.0% |
| ! | TAAACTTACCTGCTTATTAT+TGG | + | chr5_3:66271383-66271402 | Msa0826120:intron | 25.0% |
| ! | ATGAGAATATTGGTATTACA+TGG | + | chr5_3:66271465-66271484 | Msa0826120:intron | 25.0% |
| ! | TGAGAATATTGGTATTACAT+GGG | + | chr5_3:66271466-66271485 | Msa0826120:intron | 25.0% |
| ! | GTAACCAACAAATAACTTAA+GGG | - | chr5_3:66272381-66272400 | None:intergenic | 25.0% |
| ! | TGTAACCAACAAATAACTTA+AGG | - | chr5_3:66272380-66272399 | None:intergenic | 25.0% |
| !!! | GTTATTTGTTGGTTACATTT+TGG | + | chr5_3:66271980-66271999 | Msa0826120:intron | 25.0% |
| ! | GAAACCAAAAAGTAACTTAA+GGG | - | chr5_3:66272321-66272340 | None:intergenic | 25.0% |
| ! | CGAAACCAAAAATTAAGTTA+AGG | - | chr5_3:66272097-66272116 | None:intergenic | 25.0% |
| !!! | CTTAATTTTTGGTTTCGTTT+TGG | + | chr5_3:66272100-66272119 | Msa0826120:intron | 25.0% |
| ! | GAAACCAAAAAGTAACTTAA+GGG | + | chr5_3:66272321-66272340 | Msa0826120:intron | 25.0% |
| !!! | GTTATTTGTTGGTTACATTT+TGG | - | chr5_3:66271980-66271999 | None:intergenic | 25.0% |
| ! | TGTAACCAACAAATAACTTA+AGG | + | chr5_3:66272380-66272399 | Msa0826120:intron | 25.0% |
| ! | GTAACCAACAAATAACTTAA+GGG | + | chr5_3:66272381-66272400 | Msa0826120:intron | 25.0% |
| !! | TCTAACTGACTTAATGATAT+AGG | - | chr5_3:66272673-66272692 | None:intergenic | 25.0% |
| ! | CATGTCAAAATTAAACTTAC+AGG | - | chr5_3:66272798-66272817 | None:intergenic | 25.0% |
| !!! | AATGTTATTGTTGATAGTGA+TGG | + | chr5_3:66272843-66272862 | Msa0826120:intron | 25.0% |
| ! | CAGAAATCAATTAAAACTCA+TGG | - | chr5_3:66273241-66273260 | None:intergenic | 25.0% |
| !! | TTTAATTGATTTCTGTCTGT+AGG | + | chr5_3:66273246-66273265 | Msa0826120:intron | 25.0% |
| !! | TTGTTGTTAGCTGATATTAT+AGG | - | chr5_3:66273598-66273617 | None:intergenic | 25.0% |
| !! | CTCTTTGAAAAACAATATGA+AGG | - | chr5_3:66273796-66273815 | None:intergenic | 25.0% |
| ! | ATAGTTAAACTTAACAAGGA+AGG | - | chr5_3:66274022-66274041 | None:intergenic | 25.0% |
| ! | AGCTCTTAAATTCTGTTTAA+TGG | + | chr5_3:66274552-66274571 | Msa0826120:intron | 25.0% |
| !! | AGTTCATATGGATTTTTAAC+TGG | + | chr5_3:66274762-66274781 | Msa0826120:intron | 25.0% |
| ! | GTCTAAACATTATTACATAC+AGG | + | chr5_3:66274869-66274888 | Msa0826120:intron | 25.0% |
| ! | TGAATATGAATTACTTTCAC+AGG | - | chr5_3:66274977-66274996 | None:intergenic | 25.0% |
| ! | TGTTAATGAGAACATTTCTT+AGG | + | chr5_3:66275153-66275172 | Msa0826120:intron | 25.0% |
| !! | AAAAGTTGGAGTATTTATTG+AGG | + | chr5_3:66275579-66275598 | Msa0826120:intron | 25.0% |
| !! | AAAGTTGGAGTATTTATTGA+GGG | + | chr5_3:66275580-66275599 | Msa0826120:intron | 25.0% |
| ! | TATTTATTGAGGGTAAAGTT+GGG | + | chr5_3:66275590-66275609 | Msa0826120:intron | 25.0% |
| ! | CATCAATATTCAATTTGGAT+TGG | - | chr5_3:66275729-66275748 | None:intergenic | 25.0% |
| GCAATCAGTAAGTTATTTGA+CGG | - | chr5_3:66267914-66267933 | None:intergenic | 30.0% | |
| ATCCAAAATCAATTATCGCT+GGG | - | chr5_3:66268074-66268093 | None:intergenic | 30.0% | |
| TATCCAAAATCAATTATCGC+TGG | - | chr5_3:66268075-66268094 | None:intergenic | 30.0% | |
| ! | TGATTTTGGATATCTCATGT+TGG | + | chr5_3:66268083-66268102 | Msa0826120:five_prime_UTR | 30.0% |
| !!! | GTTGGTGGCAATTTTAATTT+TGG | + | chr5_3:66268101-66268120 | Msa0826120:five_prime_UTR | 30.0% |
| TTAGGGATTGAATTGAATTG+GGG | - | chr5_3:66268223-66268242 | None:intergenic | 30.0% | |
| GGAGAAAGGAATGAATAATT+AGG | - | chr5_3:66268241-66268260 | None:intergenic | 30.0% | |
| ATTAATCAAACGGTCGAAAT+AGG | + | chr5_3:66268446-66268465 | Msa0826120:five_prime_UTR | 30.0% | |
| TTAATCAAACGGTCGAAATA+GGG | + | chr5_3:66268447-66268466 | Msa0826120:five_prime_UTR | 30.0% | |
| AAATTAGAAGAGAAGAGAAG+TGG | + | chr5_3:66268550-66268569 | Msa0826120:five_prime_UTR | 30.0% | |
| GTTGAAAGAGTTAAACAAGA+AGG | - | chr5_3:66268747-66268766 | None:intergenic | 30.0% | |
| AGATAGATCTGAAAGTTAAG+AGG | - | chr5_3:66268808-66268827 | None:intergenic | 30.0% | |
| TCCCAATTTCTCGAATAAAA+TGG | - | chr5_3:66269195-66269214 | None:intergenic | 30.0% | |
| !!! | TGTGTTGACTTGTTTTAGTT+AGG | + | chr5_3:66269340-66269359 | Msa0826120:intron | 30.0% |
| ! | ATTCATTTTCCATCGATCAA+TGG | + | chr5_3:66269402-66269421 | Msa0826120:exon | 30.0% |
| ATCTGTTCATTTCATCCATT+AGG | + | chr5_3:66269535-66269554 | Msa0826120:intron | 30.0% | |
| GAATAAACATGCTGTTGTAA+AGG | + | chr5_3:66269629-66269648 | Msa0826120:intron | 30.0% | |
| !! | AAGAGTTTAATTTTGACACG+CGG | - | chr5_3:66269792-66269811 | None:intergenic | 30.0% |
| AATTAAACTCTTCTCATGGT+AGG | + | chr5_3:66269800-66269819 | Msa0826120:intron | 30.0% | |
| ATATGTAGCTGCTCTTAAAA+GGG | + | chr5_3:66270041-66270060 | Msa0826120:intron | 30.0% | |
| !! | ATTGTGGAAGAAGTATTCTT+TGG | + | chr5_3:66270081-66270100 | Msa0826120:CDS | 30.0% |
| !! | TTGTGGAAGAAGTATTCTTT+GGG | + | chr5_3:66270082-66270101 | Msa0826120:CDS | 30.0% |
| CAATGCTAAAATTTCAGGAA+AGG | + | chr5_3:66270487-66270506 | Msa0826120:intron | 30.0% | |
| ! | GGATTGATTTCTGTTCAAAT+TGG | + | chr5_3:66270651-66270670 | Msa0826120:intron | 30.0% |
| !!! | ATGTCTGTGTTTTTTTGTAC+AGG | + | chr5_3:66270707-66270726 | Msa0826120:intron | 30.0% |
| !! | TGCCATGTTTCAAGTTAATT+GGG | - | chr5_3:66270883-66270902 | None:intergenic | 30.0% |
| !! | TTGCCATGTTTCAAGTTAAT+TGG | - | chr5_3:66270884-66270903 | None:intergenic | 30.0% |
| TCTATGTATATGTATCTTGC+AGG | - | chr5_3:66270934-66270953 | None:intergenic | 30.0% | |
| !! | AATTAGGTGTTATTATGTGG+AGG | - | chr5_3:66271235-66271254 | None:intergenic | 30.0% |
| !! | AGCAATTAGGTGTTATTATG+TGG | - | chr5_3:66271238-66271257 | None:intergenic | 30.0% |
| GCTGATGTAAGAGAATTTAT+TGG | - | chr5_3:66271283-66271302 | None:intergenic | 30.0% | |
| !! | ATAATGGACCAATAATAAGC+AGG | - | chr5_3:66271394-66271413 | None:intergenic | 30.0% |
| CTAGTACTGCACTAAAATAA+TGG | - | chr5_3:66271410-66271429 | None:intergenic | 30.0% | |
| ! | TTTTCTCAGCATGAGAATAT+TGG | + | chr5_3:66271455-66271474 | Msa0826120:intron | 30.0% |
| TTCAATGTCAGCTAATGTAA+GGG | + | chr5_3:66271505-66271524 | Msa0826120:intron | 30.0% | |
| GAAGTTACAAAACTAGCAAA+TGG | - | chr5_3:66271605-66271624 | None:intergenic | 30.0% | |
| CGAAACCAAAAAGTAACTTA+AGG | - | chr5_3:66272320-66272339 | None:intergenic | 30.0% | |
| !!! | GTTACTTTTTGGTTTCGTTT+TGG | + | chr5_3:66272040-66272059 | Msa0826120:intron | 30.0% |
| ! | TGGTCCCTTAACTTAATTTT+TGG | + | chr5_3:66272089-66272108 | Msa0826120:intron | 30.0% |
| ATACATTCATCCTAACGTAA+AGG | - | chr5_3:66272159-66272178 | None:intergenic | 30.0% | |
| GATGAATGTATTAGCGTTAA+GGG | + | chr5_3:66272168-66272187 | Msa0826120:intron | 30.0% | |
| !!! | TGGTCCCTTAACTTATTTTT+TGG | - | chr5_3:66272206-66272225 | None:intergenic | 30.0% |
| !!! | GTTACTTTTTGGTTTCGTTT+TGG | - | chr5_3:66272040-66272059 | None:intergenic | 30.0% |
| CGAAACCAAAAAGTAACTTA+AGG | + | chr5_3:66272320-66272339 | Msa0826120:intron | 30.0% | |
| ! | AAAAGGCTTAATTGCTCTTT+TGG | - | chr5_3:66272408-66272427 | None:intergenic | 30.0% |
| TGTAGTTATTACGCAATTTC+TGG | - | chr5_3:66272474-66272493 | None:intergenic | 30.0% | |
| GAAATTGCGTAATAACTACA+TGG | + | chr5_3:66272474-66272493 | Msa0826120:intron | 30.0% | |
| ! | ATTGCACTATGTTTTCCAAT+AGG | - | chr5_3:66272564-66272583 | None:intergenic | 30.0% |
| GCAAAAAATTGTCTACATGA+CGG | - | chr5_3:66272651-66272670 | None:intergenic | 30.0% | |
| !! | TTTAATTTTGACATGAGCCT+TGG | + | chr5_3:66272803-66272822 | Msa0826120:intron | 30.0% |
| TGAATATCAATATGAGCTGA+AGG | - | chr5_3:66272992-66273011 | None:intergenic | 30.0% | |
| TGAAATTAATGAAGCCTTTG+CGG | + | chr5_3:66273165-66273184 | Msa0826120:CDS | 30.0% | |
| ! | ATAGAAGTTTAGAGCCATTA+AGG | - | chr5_3:66273487-66273506 | None:intergenic | 30.0% |
| !!! | CTCTTTTTTGGATAACAAGA+GGG | + | chr5_3:66273520-66273539 | Msa0826120:intron | 30.0% |
| GTAACTGTGTTTCATTCTTT+GGG | - | chr5_3:66273552-66273571 | None:intergenic | 30.0% | |
| TGTAACTGTGTTTCATTCTT+TGG | - | chr5_3:66273553-66273572 | None:intergenic | 30.0% | |
| GGAGGTTCCTTAATTATTTA+TGG | - | chr5_3:66273633-66273652 | None:intergenic | 30.0% | |
| TTAGAGATTGTCACTCATAA+TGG | - | chr5_3:66273711-66273730 | None:intergenic | 30.0% | |
| AGCATCTTAAAACCTTTGTA+TGG | - | chr5_3:66273999-66274018 | None:intergenic | 30.0% | |
| AAATAATTCATGATGAGGAG+TGG | - | chr5_3:66274158-66274177 | None:intergenic | 30.0% | |
| TGGATCAATATATTGGTCAA+TGG | - | chr5_3:66274210-66274229 | None:intergenic | 30.0% | |
| TGTGTTTGAAGAAGAAATGT+CGG | + | chr5_3:66274518-66274537 | Msa0826120:intron | 30.0% | |
| AAGCAGAAAAATGGAAAGTA+CGG | + | chr5_3:66274897-66274916 | Msa0826120:CDS | 30.0% | |
| AAGGAAAGAGTGGTAAAATT+TGG | + | chr5_3:66275099-66275118 | Msa0826120:intron | 30.0% | |
| AATTCTTCGCAATAAGTTTC+TGG | + | chr5_3:66275246-66275265 | Msa0826120:intron | 30.0% | |
| GAATTATTCATTACACAGCA+AGG | - | chr5_3:66275276-66275295 | None:intergenic | 30.0% | |
| !! | GACACTCATTTTGAAAAAGA+GGG | - | chr5_3:66275443-66275462 | None:intergenic | 30.0% |
| !! | ATTCCTTAATTTGTGTGCAT+TGG | - | chr5_3:66275473-66275492 | None:intergenic | 30.0% |
| AAATTGTGTGAGAGAAAAGT+TGG | + | chr5_3:66275565-66275584 | Msa0826120:intron | 30.0% | |
| GTATTTATTGAGGGTAAAGT+TGG | + | chr5_3:66275589-66275608 | Msa0826120:intron | 30.0% | |
| !!! | AACGTGACTTTTGTTTTGTT+TGG | - | chr5_3:66275892-66275911 | None:intergenic | 30.0% |
| CAAAACAAAAGTCACGTTAA+AGG | + | chr5_3:66275894-66275913 | Msa0826120:three_prime_UTR | 30.0% | |
| ATCAGTAAGTTATTTGACGG+AGG | - | chr5_3:66267911-66267930 | None:intergenic | 35.0% | |
| !! | TTCCCAGCGATAATTGATTT+TGG | + | chr5_3:66268069-66268088 | Msa0826120:five_prime_UTR | 35.0% |
| ! | TTTTGGATATCTCATGTTGG+TGG | + | chr5_3:66268086-66268105 | Msa0826120:five_prime_UTR | 35.0% |
| TAGGGATTGAATTGAATTGG+GGG | - | chr5_3:66268222-66268241 | None:intergenic | 35.0% | |
| TAATCAAACGGTCGAAATAG+GGG | + | chr5_3:66268448-66268467 | Msa0826120:five_prime_UTR | 35.0% | |
| ACAACTACCTACTACTGATA+GGG | - | chr5_3:66268519-66268538 | None:intergenic | 35.0% | |
| AACAACTACCTACTACTGAT+AGG | - | chr5_3:66268520-66268539 | None:intergenic | 35.0% | |
| AAAGAGGAAATGAATGAGGA+GGG | - | chr5_3:66268724-66268743 | None:intergenic | 35.0% | |
| AAGGAAAGAGGAAATGAATG+AGG | - | chr5_3:66268728-66268747 | None:intergenic | 35.0% | |
| GAGTTAAACAAGAAGGAAAG+AGG | - | chr5_3:66268740-66268759 | None:intergenic | 35.0% | |
| AACAACCACCCTTAATCTTA+AGG | + | chr5_3:66268767-66268786 | Msa0826120:five_prime_UTR | 35.0% | |
| GATTACCTTAAGATTAAGGG+TGG | - | chr5_3:66268775-66268794 | None:intergenic | 35.0% | |
| AAAGTTAAGAGGAGAAGGAA+TGG | - | chr5_3:66268797-66268816 | None:intergenic | 35.0% | |
| ATCTGAAAGTTAAGAGGAGA+AGG | - | chr5_3:66268802-66268821 | None:intergenic | 35.0% | |
| AGTTGAACATCATTGAAACG+CGG | - | chr5_3:66269058-66269077 | None:intergenic | 35.0% | |
| AGAGAAAAATCACGTTGTCA+AGG | - | chr5_3:66269122-66269141 | None:intergenic | 35.0% | |
| AAATGGTTTAAACAAACGCG+AGG | - | chr5_3:66269178-66269197 | None:intergenic | 35.0% | |
| !! | AAAGTTTGGTAATGACCTCT+AGG | - | chr5_3:66269460-66269479 | None:intergenic | 35.0% |
| CAACAATCGCAATCATTCAT+AGG | - | chr5_3:66269745-66269764 | None:intergenic | 35.0% | |
| GATATGTAGCTGCTCTTAAA+AGG | + | chr5_3:66270040-66270059 | Msa0826120:intron | 35.0% | |
| AATACTTCTTCCACAATTGC+TGG | - | chr5_3:66270078-66270097 | None:intergenic | 35.0% | |
| AACGTCCTTAGTGCTAATTT+GGG | + | chr5_3:66270105-66270124 | Msa0826120:CDS | 35.0% | |
| ! | GATGTTGAAAGATGGTTTGT+GGG | + | chr5_3:66270543-66270562 | Msa0826120:CDS | 35.0% |
| ! | AAGAGAAGACCAGGTATTTT+GGG | + | chr5_3:66270630-66270649 | Msa0826120:intron | 35.0% |
| GAAATCAATCCCAAAATACC+TGG | - | chr5_3:66270642-66270661 | None:intergenic | 35.0% | |
| ACCATCAACAATTGTTGACA+AGG | + | chr5_3:66270833-66270852 | Msa0826120:CDS | 35.0% | |
| TCCTTGTCAACAATTGTTGA+TGG | - | chr5_3:66270837-66270856 | None:intergenic | 35.0% | |
| TCATTCTTGTGTGCATATGA+TGG | + | chr5_3:66270907-66270926 | Msa0826120:intron | 35.0% | |
| !!! | TTTTGATGGCCCTTATTTTG+AGG | - | chr5_3:66271186-66271205 | None:intergenic | 35.0% |
| CTTCAATGTCAGCTAATGTA+AGG | + | chr5_3:66271504-66271523 | Msa0826120:intron | 35.0% | |
| GCTAATGTAAGGGATTAATC+AGG | + | chr5_3:66271515-66271534 | Msa0826120:intron | 35.0% | |
| ACAAGATATCAACCTTATGC+TGG | - | chr5_3:66271784-66271803 | None:intergenic | 35.0% | |
| AGACACATAGGAAAAGAATG+AGG | - | chr5_3:66271823-66271842 | None:intergenic | 35.0% | |
| TCTGCTTCTCTGTTTGTATT+TGG | + | chr5_3:66271846-66271865 | Msa0826120:intron | 35.0% | |
| ! | TGGTCTTGAACATTATTCAC+TGG | + | chr5_3:66271902-66271921 | Msa0826120:intron | 35.0% |
| TGGTCCCTTAAGTTATTTGT+TGG | + | chr5_3:66271969-66271988 | Msa0826120:intron | 35.0% | |
| !!! | TGGTCCCTTAAGTTACTTTT+TGG | + | chr5_3:66272029-66272048 | Msa0826120:intron | 35.0% |
| TAAAGGACCAAAATGGTTGA+CGG | - | chr5_3:66272142-66272161 | None:intergenic | 35.0% | |
| GGATGAATGTATTAGCGTTA+AGG | + | chr5_3:66272167-66272186 | Msa0826120:intron | 35.0% | |
| !!! | TGGTCCCTTAAGTTACTTTT+TGG | - | chr5_3:66272029-66272048 | None:intergenic | 35.0% |
| TGGTCCCTTAAGTTATTTGT+TGG | - | chr5_3:66271969-66271988 | None:intergenic | 35.0% | |
| TTGAGAGTTGAGTGATTTAG+TGG | + | chr5_3:66272434-66272453 | Msa0826120:intron | 35.0% | |
| TGAGAGTTGAGTGATTTAGT+GGG | + | chr5_3:66272435-66272454 | Msa0826120:intron | 35.0% | |
| TTGCGTAATAACTACATGGA+TGG | + | chr5_3:66272478-66272497 | Msa0826120:intron | 35.0% | |
| TCATTTGATGTGATCTGTAC+AGG | + | chr5_3:66273054-66273073 | Msa0826120:intron | 35.0% | |
| GAGCTGTTGTAAATAACTCT+GGG | - | chr5_3:66273081-66273100 | None:intergenic | 35.0% | |
| CTTGCAAATCAGAAACTTCT+TGG | + | chr5_3:66273277-66273296 | Msa0826120:CDS | 35.0% | |
| ! | GAAACTTCTTGGACTAGATT+CGG | + | chr5_3:66273288-66273307 | Msa0826120:CDS | 35.0% |
| CAACTTTCACATGATGACAA+GGG | - | chr5_3:66273324-66273343 | None:intergenic | 35.0% | |
| ATCATGTGAAAGTTGCAATC+TGG | + | chr5_3:66273329-66273348 | Msa0826120:intron | 35.0% | |
| CAATCTTCAAGACACTCAAT+CGG | - | chr5_3:66273379-66273398 | None:intergenic | 35.0% | |
| TTATCCAAAAAAGAGGAGGA+GGG | - | chr5_3:66273515-66273534 | None:intergenic | 35.0% | |
| ! | CTTGTTATCCAAAAAAGAGG+AGG | - | chr5_3:66273519-66273538 | None:intergenic | 35.0% |
| ! | CCTCTTGTTATCCAAAAAAG+AGG | - | chr5_3:66273522-66273541 | None:intergenic | 35.0% |
| !!! | CCTCTTTTTTGGATAACAAG+AGG | + | chr5_3:66273519-66273538 | Msa0826120:intron | 35.0% |
| ACACAGTTACAACTTAACCT+AGG | + | chr5_3:66273562-66273581 | Msa0826120:intron | 35.0% | |
| ! | AGATTGTCACTCATAATGGA+AGG | - | chr5_3:66273707-66273726 | None:intergenic | 35.0% |
| ! | TAGATTGCTTGAGATGGATT+GGG | - | chr5_3:66273737-66273756 | None:intergenic | 35.0% |
| TATTGCTAGATTGCTTGAGA+TGG | - | chr5_3:66273743-66273762 | None:intergenic | 35.0% | |
| ! | AAACAATATGAAGGGAGTGT+TGG | - | chr5_3:66273787-66273806 | None:intergenic | 35.0% |
| ! | TAAAAATTGGCTCATGATCG+TGG | - | chr5_3:66273864-66273883 | None:intergenic | 35.0% |
| TCTTAAAACCTTTGTATGGC+AGG | - | chr5_3:66273995-66274014 | None:intergenic | 35.0% | |
| CTTGCATCTGATGAGAAATT+AGG | + | chr5_3:66274103-66274122 | Msa0826120:intron | 35.0% | |
| TGTTTCTCCAAACCTAAGTT+TGG | + | chr5_3:66274178-66274197 | Msa0826120:intron | 35.0% | |
| GTTTCTCCAAACCTAAGTTT+GGG | + | chr5_3:66274179-66274198 | Msa0826120:intron | 35.0% | |
| TTTCTCCAAACCTAAGTTTG+GGG | + | chr5_3:66274180-66274199 | Msa0826120:intron | 35.0% | |
| CAGGCAAAAGTAAATGTACA+TGG | + | chr5_3:66274354-66274373 | Msa0826120:intron | 35.0% | |
| GCAAAAGTAAATGTACATGG+TGG | + | chr5_3:66274357-66274376 | Msa0826120:CDS | 35.0% | |
| ! | AAAAATGGAAAGTACGGTGT+AGG | + | chr5_3:66274903-66274922 | Msa0826120:CDS | 35.0% |
| AGTTGTTTACGAGGACAAAA+AGG | + | chr5_3:66275080-66275099 | Msa0826120:intron | 35.0% | |
| TTCTCTTCGCAATAAGTTTC+TGG | + | chr5_3:66275204-66275223 | Msa0826120:intron | 35.0% | |
| GAAGAATTCATTACACAGCA+AGG | - | chr5_3:66275234-66275253 | None:intergenic | 35.0% | |
| GCTAACACTTATAATGACTC+TGG | + | chr5_3:66275390-66275409 | Msa0826120:intron | 35.0% | |
| !! | CGACACTCATTTTGAAAAAG+AGG | - | chr5_3:66275444-66275463 | None:intergenic | 35.0% |
| TAGCCAATGCACACAAATTA+AGG | + | chr5_3:66275467-66275486 | Msa0826120:intron | 35.0% | |
| GATGATGAAGAGAGGAAGAA+GGG | - | chr5_3:66267777-66267796 | None:intergenic | 40.0% | |
| AAGTTATTTGACGGAGGAAG+CGG | - | chr5_3:66267905-66267924 | None:intergenic | 40.0% | |
| ! | CAATCAGCACATTGATGGTT+TGG | - | chr5_3:66268171-66268190 | None:intergenic | 40.0% |
| GAGTACAATCAGCACATTGA+TGG | - | chr5_3:66268176-66268195 | None:intergenic | 40.0% | |
| TATATACCTGAGGTGGAGAA+AGG | - | chr5_3:66268255-66268274 | None:intergenic | 40.0% | |
| TCTTGATCCCTATCAGTAGT+AGG | + | chr5_3:66268509-66268528 | Msa0826120:intron | 40.0% | |
| TAGAAGAGAAGAGAAGTGGT+TGG | + | chr5_3:66268554-66268573 | Msa0826120:five_prime_UTR | 40.0% | |
| AGAAGAGAAGTGGTTGGAAT+GGG | + | chr5_3:66268560-66268579 | Msa0826120:five_prime_UTR | 40.0% | |
| GAAAGAGGAAATGAATGAGG+AGG | - | chr5_3:66268725-66268744 | None:intergenic | 40.0% | |
| GAGTAGTGACGATAAAAACG+AGG | - | chr5_3:66268928-66268947 | None:intergenic | 40.0% | |
| TACACTTCTAGTAGCGTGTT+TGG | + | chr5_3:66269030-66269049 | Msa0826120:intron | 40.0% | |
| TGATCGCACTCAAATACATG+AGG | - | chr5_3:66269264-66269283 | None:intergenic | 40.0% | |
| AGGCAAGCACAACAAAAGTT+TGG | - | chr5_3:66269474-66269493 | None:intergenic | 40.0% | |
| TGCACAGATGTTTGTATCGT+TGG | + | chr5_3:66269856-66269875 | Msa0826120:intron | 40.0% | |
| CACAATTGCTGGATCAACAT+TGG | - | chr5_3:66270067-66270086 | None:intergenic | 40.0% | |
| CAATGTTGATCCAGCAATTG+TGG | + | chr5_3:66270065-66270084 | Msa0826120:CDS | 40.0% | |
| GAACGTCCTTAGTGCTAATT+TGG | + | chr5_3:66270104-66270123 | Msa0826120:CDS | 40.0% | |
| ACGTCCTTAGTGCTAATTTG+GGG | + | chr5_3:66270106-66270125 | Msa0826120:CDS | 40.0% | |
| GTTAACAAAGTTTGTGCGTC+AGG | + | chr5_3:66270192-66270211 | Msa0826120:CDS | 40.0% | |
| ! | TGCTGCGCAAAGTATTCAAT+TGG | + | chr5_3:66270328-66270347 | Msa0826120:CDS | 40.0% |
| ! | GCTGCGCAAAGTATTCAATT+GGG | + | chr5_3:66270329-66270348 | Msa0826120:CDS | 40.0% |
| ATAAATGACGTTGTTGTGGC+CGG | + | chr5_3:66270353-66270372 | Msa0826120:CDS | 40.0% | |
| ! | AGACATGTTTTCCATACCAC+CGG | - | chr5_3:66270375-66270394 | None:intergenic | 40.0% |
| GACACGATTCACTAGTTGAT+GGG | + | chr5_3:66270521-66270540 | Msa0826120:CDS | 40.0% | |
| ! | GTTGATGGGATGTTGAAAGA+TGG | + | chr5_3:66270535-66270554 | Msa0826120:CDS | 40.0% |
| GGATGTTGAAAGATGGTTTG+TGG | + | chr5_3:66270542-66270561 | Msa0826120:CDS | 40.0% | |
| ! | TGGTTTGTGGGATGTCTATA+AGG | + | chr5_3:66270555-66270574 | Msa0826120:CDS | 40.0% |
| TGGGATGTCTATAAGGATGT+AGG | + | chr5_3:66270562-66270581 | Msa0826120:CDS | 40.0% | |
| TGTCTATAAGGATGTAGGCA+TGG | + | chr5_3:66270567-66270586 | Msa0826120:CDS | 40.0% | |
| GTCTATAAGGATGTAGGCAT+GGG | + | chr5_3:66270568-66270587 | Msa0826120:CDS | 40.0% | |
| ! | GGTCTTCTCTTGTTATCGAA+TGG | - | chr5_3:66270621-66270640 | None:intergenic | 40.0% |
| TTCGATAACAAGAGAAGACC+AGG | + | chr5_3:66270621-66270640 | Msa0826120:CDS | 40.0% | |
| ! | CAAGAGAAGACCAGGTATTT+TGG | + | chr5_3:66270629-66270648 | Msa0826120:intron | 40.0% |
| CCCAAAGTAACCACTTTCTT+GGG | - | chr5_3:66270772-66270791 | None:intergenic | 40.0% | |
| ! | CCCAAGAAAGTGGTTACTTT+GGG | + | chr5_3:66270769-66270788 | Msa0826120:CDS | 40.0% |
| ACCCAAAGTAACCACTTTCT+TGG | - | chr5_3:66270773-66270792 | None:intergenic | 40.0% | |
| ! | AAGAAAGTGGTTACTTTGGG+TGG | + | chr5_3:66270772-66270791 | Msa0826120:CDS | 40.0% |
| ! | AGAAAGTGGTTACTTTGGGT+GGG | + | chr5_3:66270773-66270792 | Msa0826120:CDS | 40.0% |
| AACAATTGTTGACAAGGACG+AGG | + | chr5_3:66270839-66270858 | Msa0826120:CDS | 40.0% | |
| ACAATTGTTGACAAGGACGA+GGG | + | chr5_3:66270840-66270859 | Msa0826120:CDS | 40.0% | |
| ! | CGCCCAATTAACTTGAAACA+TGG | + | chr5_3:66270878-66270897 | Msa0826120:intron | 40.0% |
| GTAAGGGATTAATCAGGACT+AGG | + | chr5_3:66271521-66271540 | Msa0826120:intron | 40.0% | |
| GGATTAATCAGGACTAGGAT+TGG | + | chr5_3:66271526-66271545 | Msa0826120:intron | 40.0% | |
| CATCAAACTGGGATATCGAA+AGG | - | chr5_3:66271692-66271711 | None:intergenic | 40.0% | |
| TAACTTGGCAGCATCAAACT+GGG | - | chr5_3:66271703-66271722 | None:intergenic | 40.0% | |
| AGAAGCAGAGAAAGACACAT+AGG | - | chr5_3:66271835-66271854 | None:intergenic | 40.0% | |
| CCTAACGTAAAGGACCAAAA+TGG | - | chr5_3:66272149-66272168 | None:intergenic | 40.0% | |
| !! | CCATTTTGGTCCTTTACGTT+AGG | + | chr5_3:66272146-66272165 | Msa0826120:intron | 40.0% |
| GAGAGTTGAGTGATTTAGTG+GGG | + | chr5_3:66272436-66272455 | Msa0826120:intron | 40.0% | |
| ! | CTAACACTTTCAAGAAGCAC+AGG | + | chr5_3:66272613-66272632 | Msa0826120:intron | 40.0% |
| CAGGTCATTGCAAAAATCAC+TGG | + | chr5_3:66272918-66272937 | Msa0826120:CDS | 40.0% | |
| GGAGCTGTTGTAAATAACTC+TGG | - | chr5_3:66273082-66273101 | None:intergenic | 40.0% | |
| ATTAATGAAGCCTTTGCGGT+AGG | + | chr5_3:66273169-66273188 | Msa0826120:intron | 40.0% | |
| GCAACTTTCACATGATGACA+AGG | - | chr5_3:66273325-66273344 | None:intergenic | 40.0% | |
| TGAAGATTGCATGCTGTTGT+AGG | + | chr5_3:66273390-66273409 | Msa0826120:intron | 40.0% | |
| GTCCACATTTACCTTCATTG+CGG | + | chr5_3:66273460-66273479 | Msa0826120:intron | 40.0% | |
| TATCCAAAAAAGAGGAGGAG+GGG | - | chr5_3:66273514-66273533 | None:intergenic | 40.0% | |
| GTTATCCAAAAAAGAGGAGG+AGG | - | chr5_3:66273516-66273535 | None:intergenic | 40.0% | |
| CTAGATTGCTTGAGATGGAT+TGG | - | chr5_3:66273738-66273757 | None:intergenic | 40.0% | |
| ! | TGCTTACATAGTGGAGCTTT+GGG | - | chr5_3:66273901-66273920 | None:intergenic | 40.0% |
| AGCTTGTAGTGCTTACATAG+TGG | - | chr5_3:66273910-66273929 | None:intergenic | 40.0% | |
| AAACCTTTGTATGGCAGGAT+CGG | - | chr5_3:66273990-66274009 | None:intergenic | 40.0% | |
| ! | TCGTATCCTGGTAACACTTT+TGG | + | chr5_3:66274419-66274438 | Msa0826120:CDS | 40.0% |
| ! | CGTATCCTGGTAACACTTTT+GGG | + | chr5_3:66274420-66274439 | Msa0826120:CDS | 40.0% |
| ! | GTATCCTGGTAACACTTTTG+GGG | + | chr5_3:66274421-66274440 | Msa0826120:CDS | 40.0% |
| ! | TATCCTGGTAACACTTTTGG+GGG | + | chr5_3:66274422-66274441 | Msa0826120:CDS | 40.0% |
| !! | CAGGTACTGAAGCAGAAAAA+TGG | + | chr5_3:66274888-66274907 | Msa0826120:intron | 40.0% |
| !! | CAGGTTTCTAGTTGTTTACG+AGG | + | chr5_3:66275071-66275090 | Msa0826120:intron | 40.0% |
| AAAAGTCACGTTAAAGGCAG+AGG | + | chr5_3:66275900-66275919 | Msa0826120:three_prime_UTR | 40.0% | |
| CGATGATGAAGAGAGGAAGA+AGG | - | chr5_3:66267778-66267797 | None:intergenic | 45.0% | |
| ACCACCTCAGAACTCAACTT+CGG | + | chr5_3:66267877-66267896 | Msa0826120:five_prime_UTR | 45.0% | |
| !! | ATGTGCTGATTGTACTCCCT+CGG | + | chr5_3:66268179-66268198 | Msa0826120:five_prime_UTR | 45.0% |
| GGATTGAATTGAATTGGGGG+TGG | - | chr5_3:66268219-66268238 | None:intergenic | 45.0% | |
| TTCATTCCTTTCTCCACCTC+AGG | + | chr5_3:66268246-66268265 | Msa0826120:five_prime_UTR | 45.0% | |
| CACGCACGTGTAAAATCACT+CGG | + | chr5_3:66268397-66268416 | Msa0826120:five_prime_UTR | 45.0% | |
| ACGTTACAGATCATGACACG+TGG | - | chr5_3:66268423-66268442 | None:intergenic | 45.0% | |
| AACGGTCGAAATAGGGGTAA+AGG | + | chr5_3:66268454-66268473 | Msa0826120:five_prime_UTR | 45.0% | |
| TCGAAATAGGGGTAAAGGCA+TGG | + | chr5_3:66268459-66268478 | Msa0826120:five_prime_UTR | 45.0% | |
| ! | AAATAGGGGTAAAGGCATGG+TGG | + | chr5_3:66268462-66268481 | Msa0826120:five_prime_UTR | 45.0% |
| GAGAAGAGAAGTGGTTGGAA+TGG | + | chr5_3:66268559-66268578 | Msa0826120:five_prime_UTR | 45.0% | |
| !! | TGTTTTGAGCGTGTAACTCG+TGG | + | chr5_3:66268623-66268642 | Msa0826120:five_prime_UTR | 45.0% |
| !! | GTTTTGAGCGTGTAACTCGT+GGG | + | chr5_3:66268624-66268643 | Msa0826120:five_prime_UTR | 45.0% |
| TTAAATAGTGGCGTGCGTGT+AGG | - | chr5_3:66268658-66268677 | None:intergenic | 45.0% | |
| AACACTTCTAGCAGCGTGTT+TGG | + | chr5_3:66269089-66269108 | Msa0826120:intron | 45.0% | |
| TTTCCATCGATCAATGGCTC+CGG | + | chr5_3:66269408-66269427 | Msa0826120:exon | 45.0% | |
| ATGACCTCTAGGCTGTATAG+AGG | - | chr5_3:66269449-66269468 | None:intergenic | 45.0% | |
| AATAGCTATCGAGCCTAGCT+TGG | - | chr5_3:66269938-66269957 | None:intergenic | 45.0% | |
| CTAGGCTCGATAGCTATTGA+AGG | + | chr5_3:66269940-66269959 | Msa0826120:CDS | 45.0% | |
| CTTGCCCCAAATTAGCACTA+AGG | - | chr5_3:66270113-66270132 | None:intergenic | 45.0% | |
| GTTTGTGCGTCAGGAATGAA+AGG | + | chr5_3:66270201-66270220 | Msa0826120:CDS | 45.0% | |
| GGGCATAAATGACGTTGTTG+TGG | + | chr5_3:66270349-66270368 | Msa0826120:CDS | 45.0% | |
| GTCTAGTGTACCTAAGTACC+TGG | + | chr5_3:66270391-66270410 | Msa0826120:CDS | 45.0% | |
| ATATTGACCTTGCTTCTGCC+AGG | - | chr5_3:66270412-66270431 | None:intergenic | 45.0% | |
| CAACTAGTGAATCGTGTCCA+AGG | - | chr5_3:66270519-66270538 | None:intergenic | 45.0% | |
| GGACACGATTCACTAGTTGA+TGG | + | chr5_3:66270520-66270539 | Msa0826120:CDS | 45.0% | |
| !!! | GCAGTTCAGAGTTTTGAACG+TGG | + | chr5_3:66270738-66270757 | Msa0826120:CDS | 45.0% |
| GGAATTTCTGCCCAAGAAAG+TGG | + | chr5_3:66270759-66270778 | Msa0826120:CDS | 45.0% | |
| GCCCAAGAAAGTGGTTACTT+TGG | + | chr5_3:66270768-66270787 | Msa0826120:CDS | 45.0% | |
| ATTGGGCGATTACCTTTCCT+AGG | - | chr5_3:66270866-66270885 | None:intergenic | 45.0% | |
| ! | GGATTTTGTTGCACTTACGC+AGG | - | chr5_3:66271151-66271170 | None:intergenic | 45.0% |
| CAGCTTAGCACAGAGCAATT+AGG | - | chr5_3:66271251-66271270 | None:intergenic | 45.0% | |
| GTAACTTGGCAGCATCAAAC+TGG | - | chr5_3:66271704-66271723 | None:intergenic | 45.0% | |
| TGGTCGAAGTTTGCGTAACT+TGG | - | chr5_3:66271718-66271737 | None:intergenic | 45.0% | |
| CAAACTTCGACCAAGCTTCA+AGG | + | chr5_3:66271725-66271744 | Msa0826120:CDS | 45.0% | |
| GTTGACGGAGGAAGAGTTAA+GGG | - | chr5_3:66272127-66272146 | None:intergenic | 45.0% | |
| ! | TCTTCCTCCGTCAACCATTT+TGG | + | chr5_3:66272132-66272151 | Msa0826120:intron | 45.0% |
| !!! | TGGTGCTGCTGCATTAGTTT+TGG | + | chr5_3:66272863-66272882 | Msa0826120:CDS | 45.0% |
| !!! | GCTGCATTAGTTTTGGTGAG+TGG | + | chr5_3:66272870-66272889 | Msa0826120:CDS | 45.0% |
| !! | AGTTTTGGTGAGTGGAGAGA+AGG | + | chr5_3:66272878-66272897 | Msa0826120:CDS | 45.0% |
| !! | GAGAGAAGGCATTGAAGCTT+GGG | + | chr5_3:66272892-66272911 | Msa0826120:CDS | 45.0% |
| !! | AATAGCTTTGGGGATGGCAA+TGG | - | chr5_3:66273107-66273126 | None:intergenic | 45.0% |
| !! | ATTGGCAATAGCTTTGGGGA+TGG | - | chr5_3:66273113-66273132 | None:intergenic | 45.0% |
| ! | CTGCATTGGCAATAGCTTTG+GGG | - | chr5_3:66273117-66273136 | None:intergenic | 45.0% |
| ! | CCTGCATTGGCAATAGCTTT+GGG | - | chr5_3:66273118-66273137 | None:intergenic | 45.0% |
| CCAAAGCTATTGCCAATGCA+GGG | + | chr5_3:66273116-66273135 | Msa0826120:CDS | 45.0% | |
| GCCTTTGCGGTAGGAATTAA+TGG | + | chr5_3:66273178-66273197 | Msa0826120:intron | 45.0% | |
| GCCATTAATTCCTACCGCAA+AGG | - | chr5_3:66273182-66273201 | None:intergenic | 45.0% | |
| TGATTTCTGTCTGTAGGTCG+TGG | + | chr5_3:66273252-66273271 | Msa0826120:intron | 45.0% | |
| GACCGCAATGAAGGTAAATG+TGG | - | chr5_3:66273465-66273484 | None:intergenic | 45.0% | |
| ACCTTCATTGCGGTCCTTAA+TGG | + | chr5_3:66273470-66273489 | Msa0826120:intron | 45.0% | |
| ATCCAAAAAAGAGGAGGAGG+GGG | - | chr5_3:66273513-66273532 | None:intergenic | 45.0% | |
| TTATAGGAGCGACTACTCCT+AGG | - | chr5_3:66273582-66273601 | None:intergenic | 45.0% | |
| TTGGCAAATATGGGATGCGA+TGG | - | chr5_3:66273664-66273683 | None:intergenic | 45.0% | |
| ATCGCATCCCATATTTGCCA+AGG | + | chr5_3:66273663-66273682 | Msa0826120:intron | 45.0% | |
| GCTGATGCCTTGGCAAATAT+GGG | - | chr5_3:66273673-66273692 | None:intergenic | 45.0% | |
| TGCTGATGCCTTGGCAAATA+TGG | - | chr5_3:66273674-66273693 | None:intergenic | 45.0% | |
| AAACAAGTCTGCTGATGCCT+TGG | - | chr5_3:66273683-66273702 | None:intergenic | 45.0% | |
| !! | ATTGCTTGAGATGGATTGGG+AGG | - | chr5_3:66273734-66273753 | None:intergenic | 45.0% |
| !! | CAATATGAAGGGAGTGTTGG+AGG | - | chr5_3:66273784-66273803 | None:intergenic | 45.0% |
| ! | GCTTACATAGTGGAGCTTTG+GGG | - | chr5_3:66273900-66273919 | None:intergenic | 45.0% |
| ! | GTGCTTACATAGTGGAGCTT+TGG | - | chr5_3:66273902-66273921 | None:intergenic | 45.0% |
| ATTAGGAACCACGAGTTACG+AGG | + | chr5_3:66274120-66274139 | Msa0826120:intron | 45.0% | |
| TCATGATGAGGAGTGGTCAA+TGG | - | chr5_3:66274151-66274170 | None:intergenic | 45.0% | |
| ! | ACATGGTGGAGCTGTATCAT+TGG | + | chr5_3:66274371-66274390 | Msa0826120:CDS | 45.0% |
| ! | CATGGTGGAGCTGTATCATT+GGG | + | chr5_3:66274372-66274391 | Msa0826120:CDS | 45.0% |
| !! | ATACCCCCAAAAGTGTTACC+AGG | - | chr5_3:66274428-66274447 | None:intergenic | 45.0% |
| ! | AATGGAAAGTACGGTGTAGG+TGG | + | chr5_3:66274906-66274925 | Msa0826120:CDS | 45.0% |
| CGAGGACAAAAAGGAAAGAG+TGG | + | chr5_3:66275089-66275108 | Msa0826120:intron | 45.0% | |
| !!! | TTATAATTTATCAATAATTT+TGG | + | chr5_3:66271430-66271449 | Msa0826120:intron | 5.0% |
| !!! | TATAATTTATCAATAATTTT+GGG | + | chr5_3:66271431-66271450 | Msa0826120:intron | 5.0% |
| GTGGTGTGTGTAGTAGGATG+GGG | - | chr5_3:66267862-66267881 | None:intergenic | 50.0% | |
| GGTGGTGTGTGTAGTAGGAT+GGG | - | chr5_3:66267863-66267882 | None:intergenic | 50.0% | |
| AGGTGGTGTGTGTAGTAGGA+TGG | - | chr5_3:66267864-66267883 | None:intergenic | 50.0% | |
| ! | TCTGAGGTGGTGTGTGTAGT+AGG | - | chr5_3:66267868-66267887 | None:intergenic | 50.0% |
| GACTCCTCTATACAGCCTAG+AGG | + | chr5_3:66269442-66269461 | Msa0826120:CDS | 50.0% | |
| !! | TGGTGTTGCACGTACACCAA+TGG | + | chr5_3:66269876-66269895 | Msa0826120:CDS | 50.0% |
| ! | GGTGTTGCACGTACACCAAT+GGG | + | chr5_3:66269877-66269896 | Msa0826120:CDS | 50.0% |
| TTGCACGTACACCAATGGGT+GGG | + | chr5_3:66269881-66269900 | Msa0826120:CDS | 50.0% | |
| ! | ACACCAATGGGTGGGTTTCT+TGG | + | chr5_3:66269889-66269908 | Msa0826120:CDS | 50.0% |
| GTACCAAGAAACCCACCCAT+TGG | - | chr5_3:66269895-66269914 | None:intergenic | 50.0% | |
| CTTGCTTCTGCCAGGTACTT+AGG | - | chr5_3:66270404-66270423 | None:intergenic | 50.0% | |
| CTAAGTACCTGGCAGAAGCA+AGG | + | chr5_3:66270402-66270421 | Msa0826120:CDS | 50.0% | |
| TAGTGAATCGTGTCCAAGGC+GGG | - | chr5_3:66270515-66270534 | None:intergenic | 50.0% | |
| CTAGTGAATCGTGTCCAAGG+CGG | - | chr5_3:66270516-66270535 | None:intergenic | 50.0% | |
| CTTTGGGTGGGAAATCACTC+CGG | + | chr5_3:66270785-66270804 | Msa0826120:CDS | 50.0% | |
| ATCACTCCGGTTGAAGTCTC+TGG | + | chr5_3:66270798-66270817 | Msa0826120:CDS | 50.0% | |
| CTTCCACCAGAGACTTCAAC+CGG | - | chr5_3:66270807-66270826 | None:intergenic | 50.0% | |
| GGTTGAAGTCTCTGGTGGAA+GGG | + | chr5_3:66270806-66270825 | Msa0826120:CDS | 50.0% | |
| GTTGAAGTCTCTGGTGGAAG+GGG | + | chr5_3:66270807-66270826 | Msa0826120:CDS | 50.0% | |
| !! | CCTTATGCTGGAAGCATTGC+CGG | - | chr5_3:66271772-66271791 | None:intergenic | 50.0% |
| GGTTGACGGAGGAAGAGTTA+AGG | - | chr5_3:66272128-66272147 | None:intergenic | 50.0% | |
| AGGACCAAAATGGTTGACGG+AGG | - | chr5_3:66272139-66272158 | None:intergenic | 50.0% | |
| !! | GGAGAGAAGGCATTGAAGCT+TGG | + | chr5_3:66272891-66272910 | Msa0826120:CDS | 50.0% |
| TGGATATGCTGATGCTGCTC+AGG | + | chr5_3:66272938-66272957 | Msa0826120:CDS | 50.0% | |
| CCCAAAGCTATTGCCAATGC+AGG | + | chr5_3:66273115-66273134 | Msa0826120:CDS | 50.0% | |
| ! | CCCTGCATTGGCAATAGCTT+TGG | - | chr5_3:66273119-66273138 | None:intergenic | 50.0% |
| ACGTTCCACAGCACAGAAAG+GGG | - | chr5_3:66273424-66273443 | None:intergenic | 50.0% | |
| CACGTTCCACAGCACAGAAA+GGG | - | chr5_3:66273425-66273444 | None:intergenic | 50.0% | |
| ACACGTTCCACAGCACAGAA+AGG | - | chr5_3:66273426-66273445 | None:intergenic | 50.0% | |
| GCCATTAAGGACCGCAATGA+AGG | - | chr5_3:66273474-66273493 | None:intergenic | 50.0% | |
| TCCAAAAAAGAGGAGGAGGG+GGG | - | chr5_3:66273512-66273531 | None:intergenic | 50.0% | |
| ATATGGGATGCGATGGAGGA+TGG | - | chr5_3:66273657-66273676 | None:intergenic | 50.0% | |
| GCAAATATGGGATGCGATGG+AGG | - | chr5_3:66273661-66273680 | None:intergenic | 50.0% | |
| !! | ATGAAGGGAGTGTTGGAGGA+TGG | - | chr5_3:66273780-66273799 | None:intergenic | 50.0% |
| !! | ACTTCACGTCGATTCACGTG+TGG | - | chr5_3:66273826-66273845 | None:intergenic | 50.0% |
| !!! | AGTGGAGCTTTGGGGAGTTT+TGG | - | chr5_3:66273892-66273911 | None:intergenic | 50.0% |
| TCCATTCTCCATCGACACCT+CGG | + | chr5_3:66273955-66273974 | Msa0826120:intron | 50.0% | |
| GCTTGCCCCAAACTTAGGTT+TGG | - | chr5_3:66274188-66274207 | None:intergenic | 50.0% | |
| ! | CAATGGCTTGCCCCAAACTT+AGG | - | chr5_3:66274193-66274212 | None:intergenic | 50.0% |
| GTATCATTGGGCCATCCTCT+TGG | + | chr5_3:66274384-66274403 | Msa0826120:CDS | 50.0% | |
| GGTGTAGGTGGTGTTTGCAA+CGG | + | chr5_3:66274918-66274937 | Msa0826120:CDS | 50.0% | |
| TCACAGGAGCTCCACAACAA+GGG | - | chr5_3:66274961-66274980 | None:intergenic | 50.0% | |
| TTCACAGGAGCTCCACAACA+AGG | - | chr5_3:66274962-66274981 | None:intergenic | 50.0% | |
| ACATTGATGCCTCGCTCTTC+AGG | + | chr5_3:66275037-66275056 | Msa0826120:intron | 50.0% | |
| GAGGCAGCGATGATGAAGAG+AGG | - | chr5_3:66267785-66267804 | None:intergenic | 55.0% | |
| GGTTGAGAAGAGAGGGACGA+CGG | - | chr5_3:66267825-66267844 | None:intergenic | 55.0% | |
| CGTCGGTGGTTGAGAAGAGA+GGG | - | chr5_3:66267832-66267851 | None:intergenic | 55.0% | |
| CCTCTCTTCTCAACCACCGA+CGG | + | chr5_3:66267830-66267849 | Msa0826120:five_prime_UTR | 55.0% | |
| TAGGATGGGGATAACGCCGT+CGG | - | chr5_3:66267849-66267868 | None:intergenic | 55.0% | |
| !! | GCCGAAGTTGAGTTCTGAGG+TGG | - | chr5_3:66267881-66267900 | None:intergenic | 55.0% |
| ATTGGGGGTGGATGCCTCAA+CGG | - | chr5_3:66268207-66268226 | None:intergenic | 55.0% | |
| TTGAGCGTGTAACTCGTGGG+TGG | + | chr5_3:66268627-66268646 | Msa0826120:five_prime_UTR | 55.0% | |
| GAGGAGTCTGAAGATGCTGC+CGG | - | chr5_3:66269430-66269449 | None:intergenic | 55.0% | |
| GTTGCACGTACACCAATGGG+TGG | + | chr5_3:66269880-66269899 | Msa0826120:CDS | 55.0% | |
| TCTGTACCTGCCACCAAGCT+AGG | + | chr5_3:66269922-66269941 | Msa0826120:CDS | 55.0% | |
| AGCTATCGAGCCTAGCTTGG+TGG | - | chr5_3:66269935-66269954 | None:intergenic | 55.0% | |
| CCAAGAGCAGCTTGTCTAGC+AGG | - | chr5_3:66270138-66270157 | None:intergenic | 55.0% | |
| CCTGCTAGACAAGCTGCTCT+TGG | + | chr5_3:66270135-66270154 | Msa0826120:CDS | 55.0% | |
| AGACAAGCTGCTCTTGGAGC+AGG | + | chr5_3:66270141-66270160 | Msa0826120:CDS | 55.0% | |
| AATGACGTTGTTGTGGCCGG+TGG | + | chr5_3:66270356-66270375 | Msa0826120:CDS | 55.0% | |
| TTCAGGAAAGGATCCCGCCT+TGG | + | chr5_3:66270499-66270518 | Msa0826120:intron | 55.0% | |
| ACTCCGGTTGAAGTCTCTGG+TGG | + | chr5_3:66270801-66270820 | Msa0826120:CDS | 55.0% | |
| CGGTTGAAGTCTCTGGTGGA+AGG | + | chr5_3:66270805-66270824 | Msa0826120:CDS | 55.0% | |
| CGACCAAGCTTCAAGGAGAC+TGG | + | chr5_3:66271732-66271751 | Msa0826120:CDS | 55.0% | |
| CCTCCAGTCTCCTTGAAGCT+TGG | - | chr5_3:66271738-66271757 | None:intergenic | 55.0% | |
| CCAAGCTTCAAGGAGACTGG+AGG | + | chr5_3:66271735-66271754 | Msa0826120:CDS | 55.0% | |
| ACTGGAGGCTCTGTTACTGC+CGG | + | chr5_3:66271750-66271769 | Msa0826120:CDS | 55.0% | |
| CCGGCAATGCTTCCAGCATA+AGG | + | chr5_3:66271769-66271788 | Msa0826120:CDS | 55.0% | |
| ! | GGCATTGAAGCTTGGGCTTC+AGG | + | chr5_3:66272899-66272918 | Msa0826120:CDS | 55.0% |
| AGCTATTGCCAATGCAGGGC+TGG | + | chr5_3:66273120-66273139 | Msa0826120:CDS | 55.0% | |
| TGAAGTCTCCAGCCCTGCAT+TGG | - | chr5_3:66273131-66273150 | None:intergenic | 55.0% | |
| CACAGCACAGAAAGGGGTAG+GGG | - | chr5_3:66273418-66273437 | None:intergenic | 55.0% | |
| CCACAGCACAGAAAGGGGTA+GGG | - | chr5_3:66273419-66273438 | None:intergenic | 55.0% | |
| TCCACAGCACAGAAAGGGGT+AGG | - | chr5_3:66273420-66273439 | None:intergenic | 55.0% | |
| CAAAAAAGAGGAGGAGGGGG+GGG | - | chr5_3:66273510-66273529 | None:intergenic | 55.0% | |
| CCAAAAAAGAGGAGGAGGGG+GGG | - | chr5_3:66273511-66273530 | None:intergenic | 55.0% | |
| !! | TCACGTCGATTCACGTGTGG+TGG | - | chr5_3:66273823-66273842 | None:intergenic | 55.0% |
| !! | TCCGAGGTGTCGATGGAGAA+TGG | - | chr5_3:66273959-66273978 | None:intergenic | 55.0% |
| !! | GGACTTATCCGAGGTGTCGA+TGG | - | chr5_3:66273966-66273985 | None:intergenic | 55.0% |
| ! | AGGATCGGTGGACTTATCCG+AGG | - | chr5_3:66273975-66273994 | None:intergenic | 55.0% |
| CCTTTGTATGGCAGGATCGG+TGG | - | chr5_3:66273987-66274006 | None:intergenic | 55.0% | |
| CCACCGATCCTGCCATACAA+AGG | + | chr5_3:66273984-66274003 | Msa0826120:intron | 55.0% | |
| TGGCAATGCCTCGTAACTCG+TGG | - | chr5_3:66274131-66274150 | None:intergenic | 55.0% | |
| CACCACTGCAACCAAGAGGA+TGG | - | chr5_3:66274398-66274417 | None:intergenic | 55.0% | |
| TTGCAGTGGTGCTCGTATCC+TGG | + | chr5_3:66274407-66274426 | Msa0826120:CDS | 55.0% | |
| GTAGGTGGTGTTTGCAACGG+AGG | + | chr5_3:66274921-66274940 | Msa0826120:CDS | 55.0% | |
| TGGTGCATCTGCCCTTGTTG+TGG | + | chr5_3:66274947-66274966 | Msa0826120:CDS | 55.0% | |
| ! | TCTTCAGGAAGCATGCGTGC+AGG | + | chr5_3:66275052-66275071 | Msa0826120:intron | 55.0% |
| TGAGAAGAGAGGGACGACGG+CGG | - | chr5_3:66267822-66267841 | None:intergenic | 60.0% | |
| CCGTCGGTGGTTGAGAAGAG+AGG | - | chr5_3:66267833-66267852 | None:intergenic | 60.0% | |
| ! | GGCGCCGAAGTTGAGTTCTG+AGG | - | chr5_3:66267884-66267903 | None:intergenic | 60.0% |
| CTGCCGGAGCCATTGATCGA+TGG | - | chr5_3:66269414-66269433 | None:intergenic | 60.0% | |
| ! | ATCGAGCCTAGCTTGGTGGC+AGG | - | chr5_3:66269931-66269950 | None:intergenic | 60.0% |
| CGTTGTTGTGGCCGGTGGTA+TGG | + | chr5_3:66270361-66270380 | Msa0826120:CDS | 60.0% | |
| GTTGACAAGGACGAGGGCCT+AGG | + | chr5_3:66270846-66270865 | Msa0826120:CDS | 60.0% | |
| CAAGGACGAGGGCCTAGGAA+AGG | + | chr5_3:66270851-66270870 | Msa0826120:CDS | 60.0% | |
| !! | GCTTTGGGGATGGCAATGGC+TGG | - | chr5_3:66273103-66273122 | None:intergenic | 60.0% |
| CCCTACCCCTTTCTGTGCTG+TGG | + | chr5_3:66273416-66273435 | Msa0826120:intron | 60.0% | |
| !!! | CCCCCCCTCCTCCTCTTTTT+TGG | + | chr5_3:66273508-66273527 | Msa0826120:intron | 60.0% |
| TGGGATGCGATGGAGGATGG+CGG | - | chr5_3:66273654-66273673 | None:intergenic | 60.0% | |
| GGCCATCCTCTTGGTTGCAG+TGG | + | chr5_3:66274393-66274412 | Msa0826120:CDS | 60.0% | |
| CGAGCACCACTGCAACCAAG+AGG | - | chr5_3:66274402-66274421 | None:intergenic | 60.0% | |
| GGTGGTGTTTGCAACGGAGG+AGG | + | chr5_3:66274924-66274943 | Msa0826120:CDS | 60.0% | |
| GGTGTTTGCAACGGAGGAGG+TGG | + | chr5_3:66274927-66274946 | Msa0826120:CDS | 60.0% | |
| CGCATGCTTCCTGAAGAGCG+AGG | - | chr5_3:66275049-66275068 | None:intergenic | 60.0% | |
| ATCGCTGCCTCACCCTCCAC+CGG | + | chr5_3:66267794-66267813 | Msa0826120:five_prime_UTR | 65.0% | |
| GATGGGGATAACGCCGTCGG+TGG | - | chr5_3:66267846-66267865 | None:intergenic | 65.0% | |
| GTACTCCCTCGGCACCGTTG+AGG | + | chr5_3:66268190-66268209 | Msa0826120:five_prime_UTR | 65.0% | |
| ! | GGATGCCTCAACGGTGCCGA+GGG | - | chr5_3:66268198-66268217 | None:intergenic | 65.0% |
| ! | TGGATGCCTCAACGGTGCCG+AGG | - | chr5_3:66268199-66268218 | None:intergenic | 65.0% |
| ! | GATGCGATGGAGGATGGCGG+AGG | - | chr5_3:66273651-66273670 | None:intergenic | 65.0% |
| !!! | ACGACGGCGGCGCCGGTGGA+GGG | - | chr5_3:66267809-66267828 | None:intergenic | 80.0% |
| ! | GAGAGGGACGACGGCGGCGC+CGG | - | chr5_3:66267816-66267835 | None:intergenic | 80.0% |
| !!! | GGCGGCGCCGGTGGAGGGTG+AGG | - | chr5_3:66267804-66267823 | None:intergenic | 85.0% |
| !!! | GACGACGGCGGCGCCGGTGG+AGG | - | chr5_3:66267810-66267829 | None:intergenic | 85.0% |
| !! | AGGGACGACGGCGGCGCCGG+TGG | - | chr5_3:66267813-66267832 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 66267774 | 66275930 | 66267774 | ID=Msa0826120;Name=Msa0826120 |
| chr5_3 | mRNA | 66267774 | 66275930 | 66267774 | ID=Msa0826120-mRNA-1;Parent=Msa0826120;Name=Msa0826120-mRNA-1;_AED=0.18;_eAED=0.18;_QI=910|1|1|1|0.68|0.58|17|202|406 |
| chr5_3 | exon | 66267774 | 66268267 | 66267774 | ID=Msa0826120-mRNA-1:exon:20758;Parent=Msa0826120-mRNA-1 |
| chr5_3 | exon | 66268363 | 66268513 | 66268363 | ID=Msa0826120-mRNA-1:exon:20759;Parent=Msa0826120-mRNA-1 |
| chr5_3 | exon | 66268543 | 66268788 | 66268543 | ID=Msa0826120-mRNA-1:exon:20760;Parent=Msa0826120-mRNA-1 |
| chr5_3 | exon | 66269402 | 66269463 | 66269402 | ID=Msa0826120-mRNA-1:exon:20761;Parent=Msa0826120-mRNA-1 |
| chr5_3 | exon | 66269863 | 66269961 | 66269863 | ID=Msa0826120-mRNA-1:exon:20762;Parent=Msa0826120-mRNA-1 |
| chr5_3 | exon | 66270049 | 66270222 | 66270049 | ID=Msa0826120-mRNA-1:exon:20763;Parent=Msa0826120-mRNA-1 |
| chr5_3 | exon | 66270318 | 66270423 | 66270318 | ID=Msa0826120-mRNA-1:exon:20764;Parent=Msa0826120-mRNA-1 |
| chr5_3 | exon | 66270504 | 66270642 | 66270504 | ID=Msa0826120-mRNA-1:exon:20765;Parent=Msa0826120-mRNA-1 |
| chr5_3 | exon | 66270729 | 66270872 | 66270729 | ID=Msa0826120-mRNA-1:exon:20766;Parent=Msa0826120-mRNA-1 |
| chr5_3 | exon | 66271705 | 66271790 | 66271705 | ID=Msa0826120-mRNA-1:exon:20767;Parent=Msa0826120-mRNA-1 |
| chr5_3 | exon | 66272860 | 66272959 | 66272860 | ID=Msa0826120-mRNA-1:exon:20768;Parent=Msa0826120-mRNA-1 |
| chr5_3 | exon | 66273076 | 66273186 | 66273076 | ID=Msa0826120-mRNA-1:exon:20769;Parent=Msa0826120-mRNA-1 |
| chr5_3 | exon | 66273268 | 66273309 | 66273268 | ID=Msa0826120-mRNA-1:exon:20770;Parent=Msa0826120-mRNA-1 |
| chr5_3 | exon | 66274357 | 66274443 | 66274357 | ID=Msa0826120-mRNA-1:exon:20771;Parent=Msa0826120-mRNA-1 |
| chr5_3 | exon | 66274891 | 66275023 | 66274891 | ID=Msa0826120-mRNA-1:exon:20772;Parent=Msa0826120-mRNA-1 |
| chr5_3 | exon | 66275735 | 66275818 | 66275735 | ID=Msa0826120-mRNA-1:exon:20773;Parent=Msa0826120-mRNA-1 |
| chr5_3 | exon | 66275856 | 66275930 | 66275856 | ID=Msa0826120-mRNA-1:exon:20774;Parent=Msa0826120-mRNA-1 |
| chr5_3 | five_prime_UTR | 66267774 | 66268267 | 66267774 | ID=Msa0826120-mRNA-1:five_prime_utr;Parent=Msa0826120-mRNA-1 |
| chr5_3 | five_prime_UTR | 66268363 | 66268513 | 66268363 | ID=Msa0826120-mRNA-1:five_prime_utr;Parent=Msa0826120-mRNA-1 |
| chr5_3 | five_prime_UTR | 66268543 | 66268788 | 66268543 | ID=Msa0826120-mRNA-1:five_prime_utr;Parent=Msa0826120-mRNA-1 |
| chr5_3 | five_prime_UTR | 66269402 | 66269420 | 66269402 | ID=Msa0826120-mRNA-1:five_prime_utr;Parent=Msa0826120-mRNA-1 |
| chr5_3 | CDS | 66269421 | 66269463 | 66269421 | ID=Msa0826120-mRNA-1:cds;Parent=Msa0826120-mRNA-1 |
| chr5_3 | CDS | 66269863 | 66269961 | 66269863 | ID=Msa0826120-mRNA-1:cds;Parent=Msa0826120-mRNA-1 |
| chr5_3 | CDS | 66270049 | 66270222 | 66270049 | ID=Msa0826120-mRNA-1:cds;Parent=Msa0826120-mRNA-1 |
| chr5_3 | CDS | 66270318 | 66270423 | 66270318 | ID=Msa0826120-mRNA-1:cds;Parent=Msa0826120-mRNA-1 |
| chr5_3 | CDS | 66270504 | 66270642 | 66270504 | ID=Msa0826120-mRNA-1:cds;Parent=Msa0826120-mRNA-1 |
| chr5_3 | CDS | 66270729 | 66270872 | 66270729 | ID=Msa0826120-mRNA-1:cds;Parent=Msa0826120-mRNA-1 |
| chr5_3 | CDS | 66271705 | 66271790 | 66271705 | ID=Msa0826120-mRNA-1:cds;Parent=Msa0826120-mRNA-1 |
| chr5_3 | CDS | 66272860 | 66272959 | 66272860 | ID=Msa0826120-mRNA-1:cds;Parent=Msa0826120-mRNA-1 |
| chr5_3 | CDS | 66273076 | 66273186 | 66273076 | ID=Msa0826120-mRNA-1:cds;Parent=Msa0826120-mRNA-1 |
| chr5_3 | CDS | 66273268 | 66273309 | 66273268 | ID=Msa0826120-mRNA-1:cds;Parent=Msa0826120-mRNA-1 |
| chr5_3 | CDS | 66274357 | 66274443 | 66274357 | ID=Msa0826120-mRNA-1:cds;Parent=Msa0826120-mRNA-1 |
| chr5_3 | CDS | 66274891 | 66274980 | 66274891 | ID=Msa0826120-mRNA-1:cds;Parent=Msa0826120-mRNA-1 |
| chr5_3 | three_prime_UTR | 66274981 | 66275023 | 66274981 | ID=Msa0826120-mRNA-1:three_prime_utr;Parent=Msa0826120-mRNA-1 |
| chr5_3 | three_prime_UTR | 66275735 | 66275818 | 66275735 | ID=Msa0826120-mRNA-1:three_prime_utr;Parent=Msa0826120-mRNA-1 |
| chr5_3 | three_prime_UTR | 66275856 | 66275930 | 66275856 | ID=Msa0826120-mRNA-1:three_prime_utr;Parent=Msa0826120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
