Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0826430 | AET00959.1 | 91.832 | 404 | 16 | 3 | 1 | 387 | 1 | 404 | 0.0 | 705 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0826430 | sp|Q2HJ56|PWP1_BOVIN | 33.729 | 421 | 236 | 11 | 1 | 394 | 6 | 410 | 1.64e-59 | 204 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0826430 | G7K4Y6 | 91.832 | 404 | 16 | 3 | 1 | 387 | 1 | 404 | 0.0 | 705 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0621210 | Msa0826430 | 0.800448 | 1.434127e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0826430 | MtrunA17_Chr5g0447911 | 91.832 | 404 | 16 | 3 | 1 | 387 | 1 | 404 | 0.0 | 704 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0826430 | AT4G18905.1 | 54.808 | 416 | 153 | 7 | 1 | 382 | 1 | 415 | 3.82e-142 | 414 |
| Msa0826430 | AT4G18905.2 | 52.113 | 426 | 159 | 7 | 1 | 382 | 1 | 425 | 1.36e-138 | 405 |
| Msa0826430 | AT4G18900.1 | 53.061 | 392 | 148 | 6 | 21 | 387 | 5 | 385 | 7.45e-125 | 369 |
| Msa0826430 | AT4G35370.1 | 47.174 | 407 | 148 | 8 | 2 | 387 | 3 | 363 | 4.69e-116 | 345 |
Find 139 sgRNAs with CRISPR-Local
Find 463 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGAAGAAGATGAAGATTT+AGG | 0.118417 | 5_3:-66764719 | None:intergenic |
| TGGGACCATCCATTGAAATT+TGG | 0.157308 | 5_3:+66768189 | Msa0826430:CDS |
| GGTTGCATGTTCCAACATTT+TGG | 0.201619 | 5_3:+66771574 | Msa0826430:three_prime_UTR |
| TCTCGAAAATACGGGAAATA+AGG | 0.213191 | 5_3:+66771443 | Msa0826430:three_prime_UTR |
| AAGAAGAAGATGAAGATTTA+GGG | 0.230024 | 5_3:-66764718 | None:intergenic |
| TTATACTTAAGATTGATATT+TGG | 0.252354 | 5_3:+66771624 | Msa0826430:three_prime_UTR |
| CATTAGTGCTGCCGTATTAT+AGG | 0.256100 | 5_3:-66770814 | None:intergenic |
| CTGACAAGCGAGTGAAGATT+TGG | 0.281740 | 5_3:+66769718 | Msa0826430:CDS |
| TTCTTGGCTGTTGGTTCAAT+GGG | 0.292446 | 5_3:+66768170 | Msa0826430:CDS |
| CTTCTTGGCTGTTGGTTCAA+TGG | 0.294754 | 5_3:+66768169 | Msa0826430:CDS |
| CCCATTCTTGTTGGCATTGG+AGG | 0.307526 | 5_3:+66771294 | Msa0826430:three_prime_UTR |
| TTCAATGATATATACAGTTT+TGG | 0.330356 | 5_3:+66771710 | Msa0826430:three_prime_UTR |
| GGGACCATCCATTGAAATTT+GGG | 0.330425 | 5_3:+66768190 | Msa0826430:CDS |
| ACTTATCTTCAGTACTTTCC+TGG | 0.330956 | 5_3:-66771319 | None:intergenic |
| CGGTGCGGCGGTATTGTTGC+CGG | 0.335986 | 5_3:-66764755 | None:intergenic |
| GCTTCTTGCGACTGGATCTA+TGG | 0.347478 | 5_3:+66770924 | Msa0826430:intron |
| TGGCAAAGAGAAAAGGAAAA+AGG | 0.348457 | 5_3:+66768333 | Msa0826430:CDS |
| GTAAGGACGCCGTCGCATTC+TGG | 0.349631 | 5_3:+66770377 | Msa0826430:CDS |
| AACTACAACGGTTGGGCATT+GGG | 0.354724 | 5_3:-66771775 | None:intergenic |
| GGAGTATGATTCTGAAGATA+TGG | 0.361330 | 5_3:+66767548 | Msa0826430:CDS |
| TATGGTAACAGGGAACTTCT+TGG | 0.361380 | 5_3:+66768154 | Msa0826430:intron |
| CAAGTTCATATCGCGGGTAT+TGG | 0.366174 | 5_3:-66767778 | None:intergenic |
| TCTTCAATTTCATCTTTAGA+AGG | 0.369876 | 5_3:-66764886 | None:intergenic |
| ACAATACCGCCGCACCGTTC+CGG | 0.371804 | 5_3:+66764761 | Msa0826430:five_prime_UTR |
| AAGTCCAAACATTGTCTTCA+TGG | 0.376616 | 5_3:-66771525 | None:intergenic |
| CCCCTTAAAGGAGGAGAAAA+AGG | 0.386260 | 5_3:+66767861 | Msa0826430:CDS |
| CTCGAAAATACGGGAAATAA+GGG | 0.392186 | 5_3:+66771444 | Msa0826430:three_prime_UTR |
| CAACCCATTCTTGTTGGCAT+TGG | 0.397781 | 5_3:+66771291 | Msa0826430:three_prime_UTR |
| TCTGCTTTCGAAACCCCTTT+CGG | 0.399941 | 5_3:-66764844 | None:intergenic |
| TGCCCCATGAAGACAATGTT+TGG | 0.400741 | 5_3:+66771521 | Msa0826430:three_prime_UTR |
| ATTTGTAACAGGTAAAACTT+TGG | 0.407331 | 5_3:+66771038 | Msa0826430:intron |
| GAAGGCATCTCTCGAAAATA+CGG | 0.412196 | 5_3:+66771434 | Msa0826430:three_prime_UTR |
| TTTGTAACAGGTAAAACTTT+GGG | 0.415218 | 5_3:+66771039 | Msa0826430:intron |
| GCTGTGCAAAGTGGAAATTC+CGG | 0.418822 | 5_3:-66767825 | None:intergenic |
| TCACCATGATATCATCATTC+CGG | 0.419784 | 5_3:+66767806 | Msa0826430:CDS |
| AAGATTTGGGATGTTGTTGC+TGG | 0.420460 | 5_3:+66769732 | Msa0826430:CDS |
| CACAGGTTCAAGCAGTTGCT+TGG | 0.423769 | 5_3:+66770090 | Msa0826430:intron |
| CAACTACAACGGTTGGGCAT+TGG | 0.427953 | 5_3:-66771776 | None:intergenic |
| GGTGCGGCGGTATTGTTGCC+GGG | 0.428879 | 5_3:-66764754 | None:intergenic |
| TGCAGAGGATTCCAAAATGT+TGG | 0.429002 | 5_3:-66771585 | None:intergenic |
| TAATGAGCTTCAAAATGTTT+TGG | 0.429448 | 5_3:+66771662 | Msa0826430:three_prime_UTR |
| TTGCTTGGAACAAGGAATAC+AGG | 0.435006 | 5_3:+66769540 | Msa0826430:CDS |
| GCCTCCAATGCCAACAAGAA+TGG | 0.436954 | 5_3:-66771295 | None:intergenic |
| AAACATTGTCTTCATGGGGC+AGG | 0.442800 | 5_3:-66771519 | None:intergenic |
| TGATATTACCGACGCCTTGA+AGG | 0.443645 | 5_3:+66765945 | Msa0826430:CDS |
| TACTCAACTGCGAACAAGTT+GGG | 0.444697 | 5_3:+66771553 | Msa0826430:three_prime_UTR |
| AAGGCCCTTCAAAACATGTT+AGG | 0.446137 | 5_3:-66771752 | None:intergenic |
| CAATTTCGTGGATTCCGAAA+GGG | 0.447261 | 5_3:+66764830 | Msa0826430:CDS |
| TTAACCGTAGCTGGTGCAAT+TGG | 0.448209 | 5_3:+66765898 | Msa0826430:CDS |
| ATCCATGTTGAGATCCTTCA+AGG | 0.448626 | 5_3:-66765959 | None:intergenic |
| TTCTTCTTCTCTCGCGCCCC+CGG | 0.450355 | 5_3:+66764736 | Msa0826430:five_prime_UTR |
| GTCATGCAGCTTCTTGCGAC+TGG | 0.450737 | 5_3:+66770916 | Msa0826430:intron |
| GCACAACAGATCCTTCTTAG+TGG | 0.453648 | 5_3:+66770122 | Msa0826430:CDS |
| ACAGGGAACTTCTTGGCTGT+TGG | 0.465917 | 5_3:+66768161 | Msa0826430:intron |
| TTATGATTGCCGCAATTTCG+TGG | 0.471697 | 5_3:+66764818 | Msa0826430:exon |
| ACTCAGTACTTGGTCTTGCT+TGG | 0.472198 | 5_3:+66769525 | Msa0826430:CDS |
| ATCAAGGTCCCAAATTTCAA+TGG | 0.478209 | 5_3:-66768198 | None:intergenic |
| AGAGATGCCTTCATCAGATA+AGG | 0.487262 | 5_3:-66771423 | None:intergenic |
| GTTTGATCATACTGTTGCCT+TGG | 0.487656 | 5_3:+66770148 | Msa0826430:CDS |
| AGTCACACCGACTCAGTACT+TGG | 0.488863 | 5_3:+66769515 | Msa0826430:CDS |
| CCTCCAATGCCAACAAGAAT+GGG | 0.490352 | 5_3:-66771294 | None:intergenic |
| TACCTCTGTATCCTATAATA+CGG | 0.501888 | 5_3:+66770803 | Msa0826430:CDS |
| AAACTTTGCAGAAGGATGTA+AGG | 0.503411 | 5_3:+66770360 | Msa0826430:intron |
| GGTAGAGCCATGTGTGGTGT+TGG | 0.505588 | 5_3:+66768309 | Msa0826430:CDS |
| GTAGAGCCATGTGTGGTGTT+GGG | 0.506307 | 5_3:+66768310 | Msa0826430:CDS |
| GATGTACCTAGTGAGAGTGT+TGG | 0.506656 | 5_3:-66764917 | None:intergenic |
| AATGGATCATCACTCTGATA+AGG | 0.510295 | 5_3:+66769770 | Msa0826430:CDS |
| AAACATGTTAGGAAATATGA+TGG | 0.511291 | 5_3:-66771741 | None:intergenic |
| AGAGGACAACCCATTCTTGT+TGG | 0.512142 | 5_3:+66771285 | Msa0826430:three_prime_UTR |
| TTAGATGCAACAGAAGATGT+TGG | 0.514344 | 5_3:-66771075 | None:intergenic |
| AGTCCAAACATTGTCTTCAT+GGG | 0.519437 | 5_3:-66771524 | None:intergenic |
| CAGCGCTGATGTAGAGAGCT+TGG | 0.522228 | 5_3:+66770415 | Msa0826430:CDS |
| AATTTCGTGGATTCCGAAAG+GGG | 0.523413 | 5_3:+66764831 | Msa0826430:CDS |
| TGTTGGGTGGCAAAGAGAAA+AGG | 0.525906 | 5_3:+66768326 | Msa0826430:CDS |
| TGGAAAGTGTACTATTACAA+TGG | 0.526286 | 5_3:+66769752 | Msa0826430:CDS |
| TTTATACACTTACAACATCA+AGG | 0.526703 | 5_3:-66768214 | None:intergenic |
| AATTTCCACTTTGCACAGCA+TGG | 0.534774 | 5_3:+66767829 | Msa0826430:CDS |
| AACATTGTCTTCATGGGGCA+GGG | 0.536124 | 5_3:-66771518 | None:intergenic |
| GAGATGCCTTCATCAGATAA+GGG | 0.537543 | 5_3:-66771422 | None:intergenic |
| TTGTTGGCATTGGAGGCTCC+AGG | 0.537669 | 5_3:+66771301 | Msa0826430:three_prime_UTR |
| ATCTCCTTCTCCTTCTCAAG+AGG | 0.538511 | 5_3:+66771267 | Msa0826430:three_prime_UTR |
| ATTCCGGAATGATGATATCA+TGG | 0.539451 | 5_3:-66767809 | None:intergenic |
| GCACATGCTTTAACCGTAGC+TGG | 0.541928 | 5_3:+66765889 | Msa0826430:CDS |
| TGACAAGCGAGTGAAGATTT+GGG | 0.543098 | 5_3:+66769719 | Msa0826430:CDS |
| TACGGTCAGAGTGGTGGTGC+CGG | 0.545155 | 5_3:-66764780 | None:intergenic |
| GGGACACCCTTATCTGATGA+AGG | 0.548642 | 5_3:+66771416 | Msa0826430:three_prime_UTR |
| GATCAAACGAACCACTAAGA+AGG | 0.549508 | 5_3:-66770133 | None:intergenic |
| TCAATTTCATCTTTAGAAGG+AGG | 0.552892 | 5_3:-66764883 | None:intergenic |
| AGGTCCCAAATTTCAATGGA+TGG | 0.555988 | 5_3:-66768194 | None:intergenic |
| TCAGAGTGGTGGTGCCGGAA+CGG | 0.561104 | 5_3:-66764775 | None:intergenic |
| CATGGATAACTATGATGAAG+AGG | 0.561882 | 5_3:+66765975 | Msa0826430:CDS |
| GTGCGGCGGTATTGTTGCCG+GGG | 0.564212 | 5_3:-66764753 | None:intergenic |
| TTTACCAATTGCACCAGCTA+CGG | 0.566294 | 5_3:-66765902 | None:intergenic |
| TGATGTAGAGAGCTTGGCAT+GGG | 0.570407 | 5_3:+66770421 | Msa0826430:CDS |
| CTACTCAACTGCGAACAAGT+TGG | 0.571474 | 5_3:+66771552 | Msa0826430:three_prime_UTR |
| TAACTCTGTTGTACACGATA+CGG | 0.573513 | 5_3:-66764798 | None:intergenic |
| AATATACAAGTTCATATCGC+GGG | 0.574203 | 5_3:-66767784 | None:intergenic |
| ACTTGGTCTTGCTTGGAACA+AGG | 0.574512 | 5_3:+66769532 | Msa0826430:CDS |
| GATCTATGGATAAAACGTAA+AGG | 0.575703 | 5_3:+66770938 | Msa0826430:CDS |
| TCATTGCATGGCAGGAACAT+CGG | 0.576715 | 5_3:+66771860 | Msa0826430:three_prime_UTR |
| CGCCTTGAAGGATCTCAACA+TGG | 0.577123 | 5_3:+66765957 | Msa0826430:CDS |
| ATTATAGGATACAGAGGTAA+CGG | 0.581773 | 5_3:-66770799 | None:intergenic |
| AAGGCATCTCTCGAAAATAC+GGG | 0.582528 | 5_3:+66771435 | Msa0826430:three_prime_UTR |
| TTGCCACCCAACACCACACA+TGG | 0.587638 | 5_3:-66768316 | None:intergenic |
| TTTCGGAATCCACGAAATTG+CGG | 0.589319 | 5_3:-66764827 | None:intergenic |
| CAAACAACAACAGAATCAGT+TGG | 0.589362 | 5_3:-66767588 | None:intergenic |
| GCAATTGGTAAACCATCCAA+TGG | 0.595294 | 5_3:+66765913 | Msa0826430:CDS |
| GCAATTTCGTGGATTCCGAA+AGG | 0.597881 | 5_3:+66764829 | Msa0826430:CDS |
| TCAAGCCATGCTGTGCAAAG+TGG | 0.598638 | 5_3:-66767834 | None:intergenic |
| ACAAAAGAGTGCTCAGTGTG+TGG | 0.598926 | 5_3:-66770446 | None:intergenic |
| CAGTCCGAACATCAAAACAT+TGG | 0.599001 | 5_3:-66770716 | None:intergenic |
| GAAATCAACAAAATACAAAG+AGG | 0.602238 | 5_3:+66769490 | Msa0826430:intron |
| TGTTAGGTGAGTCTTGAAGA+TGG | 0.604591 | 5_3:+66770687 | Msa0826430:intron |
| ACAACGGTTGGGCATTGGGA+AGG | 0.606527 | 5_3:-66771771 | None:intergenic |
| GAGCCATGTGTGGTGTTGGG+TGG | 0.607120 | 5_3:+66768313 | Msa0826430:CDS |
| TTGTCCTCTTGAGAAGGAGA+AGG | 0.609717 | 5_3:-66771271 | None:intergenic |
| CTGATGTAGAGAGCTTGGCA+TGG | 0.610832 | 5_3:+66770420 | Msa0826430:CDS |
| AATGGGTTGTCCTCTTGAGA+AGG | 0.611325 | 5_3:-66771277 | None:intergenic |
| TCATCTCCAACACTCTCACT+AGG | 0.616650 | 5_3:+66764911 | Msa0826430:CDS |
| TGTTGTTTGTGCGCGTACTG+AGG | 0.617359 | 5_3:+66767602 | Msa0826430:CDS |
| GTTGAGATCCTTCAAGGCGT+CGG | 0.622922 | 5_3:-66765953 | None:intergenic |
| AGTAGCATTCTGCACAGATG+TGG | 0.625228 | 5_3:-66770751 | None:intergenic |
| ATTCTGCACAGATGTGGCAT+TGG | 0.628001 | 5_3:-66770745 | None:intergenic |
| GAATATACAAGTTCATATCG+CGG | 0.630543 | 5_3:-66767785 | None:intergenic |
| ACAAAACAATGACAAAAGCA+AGG | 0.632518 | 5_3:-66771838 | None:intergenic |
| GCATTCTGGCTATACGTGGT+CGG | 0.636465 | 5_3:+66770391 | Msa0826430:CDS |
| AGCAAGACCAAGTACTGAGT+CGG | 0.637057 | 5_3:-66769522 | None:intergenic |
| GTCCAAACATTGTCTTCATG+GGG | 0.644464 | 5_3:-66771523 | None:intergenic |
| CACGTATAGCCAGAATGCGA+CGG | 0.645659 | 5_3:-66770386 | None:intergenic |
| TGCGGCGGTATTGTTGCCGG+GGG | 0.649703 | 5_3:-66764752 | None:intergenic |
| CGTCGCATTCTGGCTATACG+TGG | 0.650851 | 5_3:+66770387 | Msa0826430:CDS |
| GTGGTGCCGGAACGGTGCGG+CGG | 0.654436 | 5_3:-66764767 | None:intergenic |
| CTGGCAGGTATGGATACTTG+AGG | 0.666889 | 5_3:+66767752 | Msa0826430:intron |
| GTGGTGGTGCCGGAACGGTG+CGG | 0.676805 | 5_3:-66764770 | None:intergenic |
| ACACGATACGGTCAGAGTGG+TGG | 0.684721 | 5_3:-66764786 | None:intergenic |
| TATGATGAAGAGGATGACAA+AGG | 0.685139 | 5_3:+66765985 | Msa0826430:CDS |
| TGCCGTATTATAGGATACAG+AGG | 0.687331 | 5_3:-66770805 | None:intergenic |
| TGTACACGATACGGTCAGAG+TGG | 0.702564 | 5_3:-66764789 | None:intergenic |
| TGATGAGGTAGAGCCATGTG+TGG | 0.762909 | 5_3:+66768303 | Msa0826430:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTTTTTTTT+TGG | + | chr5_3:66771200-66771219 | Msa0826430:intron | 0.0% |
| !!! | TTTTTTTTTTTTTTTTTTTT+GGG | + | chr5_3:66771200-66771219 | Msa0826430:intron | 0.0% |
| !!! | ATGTAATATATATGTTTTTA+AGG | + | chr5_3:66767524-66767543 | Msa0826430:intron | 10.0% |
| !! | TAAAACTTATAAGATGAAAA+TGG | + | chr5_3:66765350-66765369 | Msa0826430:intron | 15.0% |
| !! | AAAACTTATAAGATGAAAAT+GGG | + | chr5_3:66765351-66765370 | Msa0826430:intron | 15.0% |
| !! | CAATAATAATTAATACAAGA+TGG | - | chr5_3:66765804-66765823 | None:intergenic | 15.0% |
| !!! | TAATATATATGTTTTTAAGG+AGG | + | chr5_3:66767527-66767546 | Msa0826430:intron | 15.0% |
| !! | ATCTTAAAATAGTTTCATTA+TGG | + | chr5_3:66768136-66768155 | Msa0826430:intron | 15.0% |
| !! | AAAAAAATCCTTGTTAAATA+GGG | - | chr5_3:66768248-66768267 | None:intergenic | 15.0% |
| !!! | TAAATTTTGTAACTAACTTT+TGG | + | chr5_3:66769155-66769174 | Msa0826430:intron | 15.0% |
| !!! | ATCAAGTTTTAATACAAAAA+TGG | - | chr5_3:66769419-66769438 | None:intergenic | 15.0% |
| !! | TTTAAATGCTTCATTAATTA+CGG | + | chr5_3:66769867-66769886 | Msa0826430:intron | 15.0% |
| !!! | TTTTACAAATTACTTAAGAA+AGG | - | chr5_3:66769984-66770003 | None:intergenic | 15.0% |
| !! | AAACAATTTAAATAAGTCAA+GGG | - | chr5_3:66770029-66770048 | None:intergenic | 15.0% |
| !! | ATAATAAATAAAACTAACGA+GGG | - | chr5_3:66770582-66770601 | None:intergenic | 15.0% |
| !! | TATAATAAATAAAACTAACG+AGG | - | chr5_3:66770583-66770602 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAAAACAGTTGT+CGG | - | chr5_3:66771193-66771212 | None:intergenic | 15.0% |
| !! | TTATACTTAAGATTGATATT+TGG | + | chr5_3:66771624-66771643 | Msa0826430:three_prime_UTR | 15.0% |
| !!! | TTATAAGTTTTAATCGCTTA+TGG | - | chr5_3:66765342-66765361 | None:intergenic | 20.0% |
| !!! | TTGGTATTTTTCTCTTTTAA+GGG | + | chr5_3:66765374-66765393 | Msa0826430:intron | 20.0% |
| !! | TCTGTATAGAATATGTAATT+TGG | - | chr5_3:66765484-66765503 | None:intergenic | 20.0% |
| !! | AAATTACATATTCTATACAG+AGG | + | chr5_3:66765483-66765502 | Msa0826430:intron | 20.0% |
| !! | AATTACATATTCTATACAGA+GGG | + | chr5_3:66765484-66765503 | Msa0826430:intron | 20.0% |
| !!! | TTGTGTATTATTTTTTGTAG+AGG | + | chr5_3:66765576-66765595 | Msa0826430:intron | 20.0% |
| !! | TTAAGTGTTAAATACAGATT+CGG | - | chr5_3:66765762-66765781 | None:intergenic | 20.0% |
| !! | ATATACTTTAAATAGCTGAA+AGG | - | chr5_3:66766836-66766855 | None:intergenic | 20.0% |
| !!! | ATTTTTTCTCATGATATATC+AGG | + | chr5_3:66767358-66767377 | Msa0826430:intron | 20.0% |
| !!! | TTTTTATCAGAGTAATGAAT+TGG | + | chr5_3:66767414-66767433 | Msa0826430:intron | 20.0% |
| !! | CAAAAAAATCCTTGTTAAAT+AGG | - | chr5_3:66768249-66768268 | None:intergenic | 20.0% |
| !! | CTGTTTGAAAATTTAAATGT+TGG | + | chr5_3:66768506-66768525 | Msa0826430:intron | 20.0% |
| !!! | TCTAACATTTTTCCAAAATT+TGG | + | chr5_3:66768982-66769001 | Msa0826430:intron | 20.0% |
| !!! | TTTGGATTTTGATTAGTATT+TGG | + | chr5_3:66769173-66769192 | Msa0826430:intron | 20.0% |
| !! | ATAATTATACAAGAAAACGA+GGG | - | chr5_3:66769262-66769281 | None:intergenic | 20.0% |
| !! | AATAATTATACAAGAAAACG+AGG | - | chr5_3:66769263-66769282 | None:intergenic | 20.0% |
| !! | CAAATAAAACCATTATGTTA+AGG | - | chr5_3:66769613-66769632 | None:intergenic | 20.0% |
| !! | CAAACAATTTAAATAAGTCA+AGG | - | chr5_3:66770030-66770049 | None:intergenic | 20.0% |
| !! | ATTAAGTAAAATTAGTACAC+AGG | - | chr5_3:66770496-66770515 | None:intergenic | 20.0% |
| !! | TAATAAATAAAACTAACGAG+GGG | - | chr5_3:66770581-66770600 | None:intergenic | 20.0% |
| !!! | AATTTCCAATTTTGTTTTCT+TGG | + | chr5_3:66770624-66770643 | Msa0826430:intron | 20.0% |
| !! | TACAATAGAGATATATAGTA+GGG | - | chr5_3:66771130-66771149 | None:intergenic | 20.0% |
| !! | TTACAATAGAGATATATAGT+AGG | - | chr5_3:66771131-66771150 | None:intergenic | 20.0% |
| !!! | TTCAATGATATATACAGTTT+TGG | + | chr5_3:66771710-66771729 | Msa0826430:three_prime_UTR | 20.0% |
| ! | AAGAAGAAGATGAAGATTTA+GGG | - | chr5_3:66764721-66764740 | None:intergenic | 25.0% |
| ! | TCTTCAATTTCATCTTTAGA+AGG | - | chr5_3:66764889-66764908 | None:intergenic | 25.0% |
| ! | AGTTTCAATTATGAATGAAG+AGG | - | chr5_3:66764955-66764974 | None:intergenic | 25.0% |
| ! | TGTGAGTAGTCAATAAAATT+TGG | + | chr5_3:66765301-66765320 | Msa0826430:intron | 25.0% |
| ! | GTGAGTAGTCAATAAAATTT+GGG | + | chr5_3:66765302-66765321 | Msa0826430:intron | 25.0% |
| !! | GTTGGTATTTTTCTCTTTTA+AGG | + | chr5_3:66765373-66765392 | Msa0826430:intron | 25.0% |
| !! | TTTGGTATTATTTCTTGTCA+GGG | - | chr5_3:66765466-66765485 | None:intergenic | 25.0% |
| !! | ATTTGGTATTATTTCTTGTC+AGG | - | chr5_3:66765467-66765486 | None:intergenic | 25.0% |
| ! | AATTTGTCCCCAATATAAAA+TGG | + | chr5_3:66765542-66765561 | Msa0826430:intron | 25.0% |
| !! | AGTCTCTACCATTTTATATT+GGG | - | chr5_3:66765553-66765572 | None:intergenic | 25.0% |
| !! | TAGTCTCTACCATTTTATAT+TGG | - | chr5_3:66765554-66765573 | None:intergenic | 25.0% |
| !!! | TTTTTTGTAGAGGACTAAAT+TGG | + | chr5_3:66765586-66765605 | Msa0826430:intron | 25.0% |
| !! | TTTTTGTAGAGGACTAAATT+GGG | + | chr5_3:66765587-66765606 | Msa0826430:intron | 25.0% |
| !!! | AATATCATCACTTTTTCCAT+TGG | - | chr5_3:66765932-66765951 | None:intergenic | 25.0% |
| ! | CAATTAGATTCCACATTATT+TGG | - | chr5_3:66766462-66766481 | None:intergenic | 25.0% |
| ! | CAAATAATGTGGAATCTAAT+TGG | + | chr5_3:66766460-66766479 | Msa0826430:intron | 25.0% |
| !!! | ACATTTTTTTGTACGACTAA+GGG | - | chr5_3:66766580-66766599 | None:intergenic | 25.0% |
| !!! | TACATTTTTTTGTACGACTA+AGG | - | chr5_3:66766581-66766600 | None:intergenic | 25.0% |
| ! | AAATGTAAAAGAAATGGATG+AGG | - | chr5_3:66766702-66766721 | None:intergenic | 25.0% |
| !! | ATCCATTTCTTTTACATTTG+AGG | + | chr5_3:66766703-66766722 | Msa0826430:intron | 25.0% |
| !! | TCCATTTCTTTTACATTTGA+GGG | + | chr5_3:66766704-66766723 | Msa0826430:intron | 25.0% |
| ! | GTATTCCTGATTATATTCTT+AGG | - | chr5_3:66766753-66766772 | None:intergenic | 25.0% |
| ! | ACTATTTCAATGTAACACAA+TGG | + | chr5_3:66766871-66766890 | Msa0826430:intron | 25.0% |
| ! | TCCATAAGCTACAAATTAAA+CGG | + | chr5_3:66767274-66767293 | Msa0826430:intron | 25.0% |
| ! | GTATAAATATAAGCAGCATA+AGG | - | chr5_3:66767336-66767355 | None:intergenic | 25.0% |
| !! | ACATTTTTATCGTTGATGTA+TGG | - | chr5_3:66767442-66767461 | None:intergenic | 25.0% |
| !! | TTTACTTGATACTTGTTGAT+GGG | + | chr5_3:66767902-66767921 | Msa0826430:intron | 25.0% |
| !! | ACATTTTACTTGCAAAGAAA+TGG | - | chr5_3:66767967-66767986 | None:intergenic | 25.0% |
| ! | TTTCTTTGCAAGTAAAATGT+AGG | + | chr5_3:66767967-66767986 | Msa0826430:intron | 25.0% |
| ! | TTCTTTGCAAGTAAAATGTA+GGG | + | chr5_3:66767968-66767987 | Msa0826430:intron | 25.0% |
| ! | AAGATAATAAGATGATGCAA+AGG | - | chr5_3:66768121-66768140 | None:intergenic | 25.0% |
| ! | AATAGTTTCATTATGGTAAC+AGG | + | chr5_3:66768143-66768162 | Msa0826430:intron | 25.0% |
| ! | ATAGTTTCATTATGGTAACA+GGG | + | chr5_3:66768144-66768163 | Msa0826430:intron | 25.0% |
| ! | TTTATACACTTACAACATCA+AGG | - | chr5_3:66768217-66768236 | None:intergenic | 25.0% |
| ! | TCAACCACCATAAAATTATT+TGG | + | chr5_3:66768397-66768416 | Msa0826430:intron | 25.0% |
| !! | GTAACCAAATAATTTTATGG+TGG | - | chr5_3:66768404-66768423 | None:intergenic | 25.0% |
| !! | GAGGTAACCAAATAATTTTA+TGG | - | chr5_3:66768407-66768426 | None:intergenic | 25.0% |
| ! | AGTGTTATAAAAACATAGAC+AGG | - | chr5_3:66768739-66768758 | None:intergenic | 25.0% |
| ! | CTAAAAGCAACTATTTAAGT+AGG | - | chr5_3:66768961-66768980 | None:intergenic | 25.0% |
| !! | TTTTTCCAAAATTTGGATTC+TGG | + | chr5_3:66768989-66769008 | Msa0826430:intron | 25.0% |
| !!! | ATTGATCATCTTTTGACTTT+TGG | + | chr5_3:66769125-66769144 | Msa0826430:intron | 25.0% |
| ! | GAAATCAACAAAATACAAAG+AGG | + | chr5_3:66769490-66769509 | Msa0826430:intron | 25.0% |
| !!! | GAATACAGGTTTGTTAAATT+TGG | + | chr5_3:66769554-66769573 | Msa0826430:intron | 25.0% |
| ! | AAAGTTCTATATTGTTGACA+AGG | + | chr5_3:66769942-66769961 | Msa0826430:intron | 25.0% |
| ! | AATATTGCAAACAAAGTGTA+AGG | - | chr5_3:66770237-66770256 | None:intergenic | 25.0% |
| !! | TTTGAAGTTTAGCTATCTAA+TGG | + | chr5_3:66770324-66770343 | Msa0826430:intron | 25.0% |
| ! | TAGATCCAAGAAAACAAAAT+TGG | - | chr5_3:66770632-66770651 | None:intergenic | 25.0% |
| !!! | TTTTGTTTTCTTGGATCTAA+AGG | + | chr5_3:66770633-66770652 | Msa0826430:intron | 25.0% |
| ! | AATGATTTAATTGTCCTGTT+AGG | + | chr5_3:66770671-66770690 | Msa0826430:intron | 25.0% |
| !! | GTTTTACCTGTTACAAATAA+TGG | - | chr5_3:66771036-66771055 | None:intergenic | 25.0% |
| ! | ATTTGTAACAGGTAAAACTT+TGG | + | chr5_3:66771038-66771057 | Msa0826430:intron | 25.0% |
| ! | TTTGTAACAGGTAAAACTTT+GGG | + | chr5_3:66771039-66771058 | Msa0826430:intron | 25.0% |
| ! | ACAATAGAGATATATAGTAG+GGG | - | chr5_3:66771129-66771148 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTGGGTGTTTGTT+AGG | + | chr5_3:66771233-66771252 | Msa0826430:intron | 25.0% |
| ! | TTAAGAATACCTGAAGTTAA+AGG | - | chr5_3:66771351-66771370 | None:intergenic | 25.0% |
| !! | ATCATCAATTTTTGCAGTTA+TGG | + | chr5_3:66771395-66771414 | Msa0826430:intron | 25.0% |
| !! | TCATCAATTTTTGCAGTTAT+GGG | + | chr5_3:66771396-66771415 | Msa0826430:intron | 25.0% |
| !! | TAATGAGCTTCAAAATGTTT+TGG | + | chr5_3:66771662-66771681 | Msa0826430:three_prime_UTR | 25.0% |
| !!! | TCAAAATGTTTTGGTAGTTT+AGG | + | chr5_3:66771671-66771690 | Msa0826430:three_prime_UTR | 25.0% |
| ! | AAACATGTTAGGAAATATGA+TGG | - | chr5_3:66771744-66771763 | None:intergenic | 25.0% |
| !!! | TATTTCCTAACATGTTTTGA+AGG | + | chr5_3:66771747-66771766 | Msa0826430:three_prime_UTR | 25.0% |
| !!! | ATTTCCTAACATGTTTTGAA+GGG | + | chr5_3:66771748-66771767 | Msa0826430:three_prime_UTR | 25.0% |
| GAAGAAGAAGATGAAGATTT+AGG | - | chr5_3:66764722-66764741 | None:intergenic | 30.0% | |
| ! | TCAATTTCATCTTTAGAAGG+AGG | - | chr5_3:66764886-66764905 | None:intergenic | 30.0% |
| ! | TCTGAAACATCGTTATCAAA+TGG | - | chr5_3:66765031-66765050 | None:intergenic | 30.0% |
| AAAAATAAACCAATCCGAAC+AGG | + | chr5_3:66765257-66765276 | Msa0826430:intron | 30.0% | |
| CTTATAAGATGAAAATGGGT+TGG | + | chr5_3:66765355-66765374 | Msa0826430:intron | 30.0% | |
| !! | ATTTTTCTCTTTTAAGGGAC+TGG | + | chr5_3:66765379-66765398 | Msa0826430:intron | 30.0% |
| TTCTTGTCAGGGAATAAATT+GGG | - | chr5_3:66765455-66765474 | None:intergenic | 30.0% | |
| TTTCTTGTCAGGGAATAAAT+TGG | - | chr5_3:66765456-66765475 | None:intergenic | 30.0% | |
| ! | GTCTCTACCATTTTATATTG+GGG | - | chr5_3:66765552-66765571 | None:intergenic | 30.0% |
| AAAATTATGAAGGACCAAAC+TGG | + | chr5_3:66765617-66765636 | Msa0826430:intron | 30.0% | |
| AAATTATGAAGGACCAAACT+GGG | + | chr5_3:66765618-66765637 | Msa0826430:intron | 30.0% | |
| ATTATTGCTTATTGCAGTGT+AGG | + | chr5_3:66765817-66765836 | Msa0826430:intron | 30.0% | |
| ATGAGTTAAAGATAGATGGA+TGG | - | chr5_3:66766022-66766041 | None:intergenic | 30.0% | |
| GTGAATGAGTTAAAGATAGA+TGG | - | chr5_3:66766026-66766045 | None:intergenic | 30.0% | |
| TACATGTGTCTATGTAATGT+CGG | - | chr5_3:66766205-66766224 | None:intergenic | 30.0% | |
| TAGACACATGTAGTTACATT+TGG | + | chr5_3:66766213-66766232 | Msa0826430:intron | 30.0% | |
| ! | TTTTCTGATCATGAGTTTAC+TGG | - | chr5_3:66766428-66766447 | None:intergenic | 30.0% |
| ACTACACTTACCAAATAATG+TGG | + | chr5_3:66766449-66766468 | Msa0826430:intron | 30.0% | |
| TAGAATATGAATGCACAACT+TGG | - | chr5_3:66766533-66766552 | None:intergenic | 30.0% | |
| TCCCTCAAATGTAAAAGAAA+TGG | - | chr5_3:66766708-66766727 | None:intergenic | 30.0% | |
| TTCCTGATTATATTCTTAGG+TGG | - | chr5_3:66766750-66766769 | None:intergenic | 30.0% | |
| ! | TGTATAAAAAGCGTAAACAC+TGG | + | chr5_3:66766790-66766809 | Msa0826430:intron | 30.0% |
| AATAGCTGAAAGGTTAATTG+CGG | - | chr5_3:66766826-66766845 | None:intergenic | 30.0% | |
| !! | TGTTTTTCAGTTGCATTAGT+AGG | + | chr5_3:66766977-66766996 | Msa0826430:intron | 30.0% |
| ATTCATAAGGTTTGTAGTGT+TGG | - | chr5_3:66767200-66767219 | None:intergenic | 30.0% | |
| GGAAAAACTATGATAAACCA+AGG | - | chr5_3:66767315-66767334 | None:intergenic | 30.0% | |
| ! | AGGATTTGAGTTATTCAGTT+CGG | + | chr5_3:66767378-66767397 | Msa0826430:intron | 30.0% |
| ATCTTCAATTCATGTTCACA+AGG | - | chr5_3:66767662-66767681 | None:intergenic | 30.0% | |
| AATATACAAGTTCATATCGC+GGG | - | chr5_3:66767787-66767806 | None:intergenic | 30.0% | |
| GAATATACAAGTTCATATCG+CGG | - | chr5_3:66767788-66767807 | None:intergenic | 30.0% | |
| AGTAAAGAACTCATAGGATT+TGG | - | chr5_3:66767888-66767907 | None:intergenic | 30.0% | |
| GTATCAAGTAAAGAACTCAT+AGG | - | chr5_3:66767894-66767913 | None:intergenic | 30.0% | |
| ! | CTTTACTTGATACTTGTTGA+TGG | + | chr5_3:66767901-66767920 | Msa0826430:intron | 30.0% |
| ! | CTGTAATGTTTTATGCAGTT+TGG | + | chr5_3:66767929-66767948 | Msa0826430:intron | 30.0% |
| AAAAGGAAAAAGGGGAAAAA+TGG | + | chr5_3:66768343-66768362 | Msa0826430:CDS | 30.0% | |
| AAAGGAAAAAGGGGAAAAAT+GGG | + | chr5_3:66768344-66768363 | Msa0826430:CDS | 30.0% | |
| AAGTTGGAACCAAATAATGT+GGG | - | chr5_3:66768589-66768608 | None:intergenic | 30.0% | |
| !! | GTCTTTTTCACTCTCAAATA+AGG | + | chr5_3:66768786-66768805 | Msa0826430:intron | 30.0% |
| ! | AGAATCCAGAATCCAAATTT+TGG | - | chr5_3:66768997-66769016 | None:intergenic | 30.0% |
| ACAATAGAGCAAAATGTACT+TGG | - | chr5_3:66769076-66769095 | None:intergenic | 30.0% | |
| ! | TACATTTTGCTCTATTGTCA+GGG | + | chr5_3:66769078-66769097 | Msa0826430:intron | 30.0% |
| !!! | GGATTTTGATTAGTATTTGG+TGG | + | chr5_3:66769176-66769195 | Msa0826430:intron | 30.0% |
| CTAGATTTACCAACAACAAA+TGG | + | chr5_3:66769331-66769350 | Msa0826430:intron | 30.0% | |
| !! | AAGAGATTTCCATTTGTTGT+TGG | - | chr5_3:66769343-66769362 | None:intergenic | 30.0% |
| !! | TGCTGATTCTGTAATTTGTT+TGG | + | chr5_3:66769462-66769481 | Msa0826430:intron | 30.0% |
| CTATGCTTTCCTTAACATAA+TGG | + | chr5_3:66769601-66769620 | Msa0826430:intron | 30.0% | |
| ! | TGGAAAGTGTACTATTACAA+TGG | + | chr5_3:66769752-66769771 | Msa0826430:CDS | 30.0% |
| CAATTTAAATAAGTCAAGGG+CGG | - | chr5_3:66770026-66770045 | None:intergenic | 30.0% | |
| GAAAAATTGGATCATTACCA+AGG | - | chr5_3:66770168-66770187 | None:intergenic | 30.0% | |
| ! | TCCAATTTTTCCTTGTTACT+TGG | + | chr5_3:66770177-66770196 | Msa0826430:intron | 30.0% |
| GTGTTAATAAACTTTGCAGA+AGG | + | chr5_3:66770352-66770371 | Msa0826430:intron | 30.0% | |
| ATTATAGGATACAGAGGTAA+CGG | - | chr5_3:66770802-66770821 | None:intergenic | 30.0% | |
| TACCTCTGTATCCTATAATA+CGG | + | chr5_3:66770803-66770822 | Msa0826430:CDS | 30.0% | |
| GATCTATGGATAAAACGTAA+AGG | + | chr5_3:66770938-66770957 | Msa0826430:CDS | 30.0% | |
| TTACTGCCATTATTTGTAAC+AGG | + | chr5_3:66771027-66771046 | Msa0826430:intron | 30.0% | |
| ! | AAGAAAAAACTGACAGCTTT+TGG | - | chr5_3:66771105-66771124 | None:intergenic | 30.0% |
| AAAAAACAACTACAACGGTT+GGG | - | chr5_3:66771785-66771804 | None:intergenic | 30.0% | |
| TGAGGAAAAAACAACTACAA+CGG | - | chr5_3:66771790-66771809 | None:intergenic | 30.0% | |
| !!! | GTTGTTTTTTCCTCACTAAA+AGG | + | chr5_3:66771795-66771814 | Msa0826430:three_prime_UTR | 30.0% |
| ACAAAACAATGACAAAAGCA+AGG | - | chr5_3:66771841-66771860 | None:intergenic | 30.0% | |
| TAACTCTGTTGTACACGATA+CGG | - | chr5_3:66764801-66764820 | None:intergenic | 35.0% | |
| !! | AAATTGTGACGGACCATAAT+GGG | - | chr5_3:66765424-66765443 | None:intergenic | 35.0% |
| !! | TAAATTGTGACGGACCATAA+TGG | - | chr5_3:66765425-66765444 | None:intergenic | 35.0% |
| ! | GGTCCTTCATAATTTTCTTG+TGG | - | chr5_3:66765613-66765632 | None:intergenic | 35.0% |
| ! | AAGAGCTTTTGAGCAGAAAA+TGG | - | chr5_3:66765677-66765696 | None:intergenic | 35.0% |
| AAGCTCTTCACTTAAAGTCT+TGG | + | chr5_3:66765689-66765708 | Msa0826430:intron | 35.0% | |
| AGCTCTTCACTTAAAGTCTT+GGG | + | chr5_3:66765690-66765709 | Msa0826430:intron | 35.0% | |
| ATACATGAAAAGGATGGCAA+TGG | - | chr5_3:66765738-66765757 | None:intergenic | 35.0% | |
| TTCGGAATACATGAAAAGGA+TGG | - | chr5_3:66765744-66765763 | None:intergenic | 35.0% | |
| CAGATTCGGAATACATGAAA+AGG | - | chr5_3:66765748-66765767 | None:intergenic | 35.0% | |
| !!! | TCATCACTTTTTCCATTGGA+TGG | - | chr5_3:66765928-66765947 | None:intergenic | 35.0% |
| CATGGATAACTATGATGAAG+AGG | + | chr5_3:66765975-66765994 | Msa0826430:CDS | 35.0% | |
| TATGATGAAGAGGATGACAA+AGG | + | chr5_3:66765985-66766004 | Msa0826430:CDS | 35.0% | |
| ! | AAAGTTTTGCACCTAAACCA+AGG | - | chr5_3:66766335-66766354 | None:intergenic | 35.0% |
| !!! | GGTGCAAAACTTTTTTCTGA+TGG | + | chr5_3:66766342-66766361 | Msa0826430:intron | 35.0% |
| CTGTAATGTAATACCAAACC+TGG | + | chr5_3:66766365-66766384 | Msa0826430:intron | 35.0% | |
| GTGGAATCTAATTGGTAAAG+AGG | + | chr5_3:66766468-66766487 | Msa0826430:intron | 35.0% | |
| TGCCACCTAAGAATATAATC+AGG | + | chr5_3:66766745-66766764 | Msa0826430:intron | 35.0% | |
| ! | TAAAAAGCGTAAACACTGGT+AGG | + | chr5_3:66766794-66766813 | Msa0826430:intron | 35.0% |
| !! | GCCGTTTAATTTGTAGCTTA+TGG | - | chr5_3:66767278-66767297 | None:intergenic | 35.0% |
| ATTAAACGGCTTATCCAAAC+AGG | + | chr5_3:66767288-66767307 | Msa0826430:intron | 35.0% | |
| TTAAACGGCTTATCCAAACA+GGG | + | chr5_3:66767289-66767308 | Msa0826430:intron | 35.0% | |
| ! | GGATTTGAGTTATTCAGTTC+GGG | + | chr5_3:66767379-66767398 | Msa0826430:intron | 35.0% |
| ! | GATTTGAGTTATTCAGTTCG+GGG | + | chr5_3:66767380-66767399 | Msa0826430:intron | 35.0% |
| TAACAAAACCATGCAAGTGT+TGG | - | chr5_3:66767475-66767494 | None:intergenic | 35.0% | |
| !!! | ACACTTGCATGGTTTTGTTA+AGG | + | chr5_3:66767475-66767494 | Msa0826430:intron | 35.0% |
| ! | GGAGTATGATTCTGAAGATA+TGG | + | chr5_3:66767548-66767567 | Msa0826430:CDS | 35.0% |
| CAAACAACAACAGAATCAGT+TGG | - | chr5_3:66767591-66767610 | None:intergenic | 35.0% | |
| TATTACATGTTTATCTGCCC+TGG | + | chr5_3:66767733-66767752 | Msa0826430:intron | 35.0% | |
| TCACCATGATATCATCATTC+CGG | + | chr5_3:66767806-66767825 | Msa0826430:CDS | 35.0% | |
| ATTCCGGAATGATGATATCA+TGG | - | chr5_3:66767812-66767831 | None:intergenic | 35.0% | |
| ! | ACCTTTTTCTCCTCCTTTAA+GGG | - | chr5_3:66767865-66767884 | None:intergenic | 35.0% |
| ATCAAGGTCCCAAATTTCAA+TGG | - | chr5_3:66768201-66768220 | None:intergenic | 35.0% | |
| TGTTGTTGCCCTATTTAACA+AGG | + | chr5_3:66768237-66768256 | Msa0826430:intron | 35.0% | |
| ! | CTTTTGTTCTCAGATTGATG+AGG | + | chr5_3:66768288-66768307 | Msa0826430:intron | 35.0% |
| TGGCAAAGAGAAAAGGAAAA+AGG | + | chr5_3:66768333-66768352 | Msa0826430:CDS | 35.0% | |
| GGCAAAGAGAAAAGGAAAAA+GGG | + | chr5_3:66768334-66768353 | Msa0826430:CDS | 35.0% | |
| GCAAAGAGAAAAGGAAAAAG+GGG | + | chr5_3:66768335-66768354 | Msa0826430:CDS | 35.0% | |
| AAAGGGGAAAAATGGGAAAA+AGG | + | chr5_3:66768351-66768370 | Msa0826430:CDS | 35.0% | |
| GGAACTCAAAAAATGGGAAA+AGG | - | chr5_3:66768567-66768586 | None:intergenic | 35.0% | |
| ATGTGGGGAACTCAAAAAAT+GGG | - | chr5_3:66768573-66768592 | None:intergenic | 35.0% | |
| AATGTGGGGAACTCAAAAAA+TGG | - | chr5_3:66768574-66768593 | None:intergenic | 35.0% | |
| ! | TTTGAGTTCCCCACATTATT+TGG | + | chr5_3:66768577-66768596 | Msa0826430:intron | 35.0% |
| AGTTGGAACCAAATAATGTG+GGG | - | chr5_3:66768588-66768607 | None:intergenic | 35.0% | |
| GAAGTTGGAACCAAATAATG+TGG | - | chr5_3:66768590-66768609 | None:intergenic | 35.0% | |
| TACTCCTTCAACTTGAATGT+GGG | + | chr5_3:66768617-66768636 | Msa0826430:intron | 35.0% | |
| ACAAAATCACCGTAATGTGA+GGG | + | chr5_3:66768659-66768678 | Msa0826430:intron | 35.0% | |
| ! | TTTTGTGTTCCCTCACATTA+CGG | - | chr5_3:66768671-66768690 | None:intergenic | 35.0% |
| AGGGAACACAAAAACTGTAT+TGG | + | chr5_3:66768678-66768697 | Msa0826430:intron | 35.0% | |
| GAACACAAAAACTGTATTGG+AGG | + | chr5_3:66768681-66768700 | Msa0826430:intron | 35.0% | |
| AAACCATTAGGCTCCATTTA+GGG | - | chr5_3:66768869-66768888 | None:intergenic | 35.0% | |
| TAGTATGCAGCTACTCAATA+TGG | - | chr5_3:66768910-66768929 | None:intergenic | 35.0% | |
| !! | CATATCTACCTTCTAGTTTG+TGG | + | chr5_3:66769025-66769044 | Msa0826430:intron | 35.0% |
| AATACCATCCACAAACTAGA+AGG | - | chr5_3:66769036-66769055 | None:intergenic | 35.0% | |
| ! | GTACATTTTGCTCTATTGTC+AGG | + | chr5_3:66769077-66769096 | Msa0826430:intron | 35.0% |
| ! | TGTTGTTGGTAAATCTAGCT+TGG | - | chr5_3:66769329-66769348 | None:intergenic | 35.0% |
| CAAATTACAGAATCAGCAAG+AGG | - | chr5_3:66769460-66769479 | None:intergenic | 35.0% | |
| GTCAAACTCAAAAGATGTCA+AGG | - | chr5_3:66769654-66769673 | None:intergenic | 35.0% | |
| AATGGATCATCACTCTGATA+AGG | + | chr5_3:66769770-66769789 | Msa0826430:CDS | 35.0% | |
| ! | ATGTGGATTGAAAGACATCA+TGG | - | chr5_3:66770065-66770084 | None:intergenic | 35.0% |
| GCCAAGTAACAAGGAAAAAT+TGG | - | chr5_3:66770181-66770200 | None:intergenic | 35.0% | |
| TGTAGAAAAGCCAAGTAACA+AGG | - | chr5_3:66770190-66770209 | None:intergenic | 35.0% | |
| AAACTTTGCAGAAGGATGTA+AGG | + | chr5_3:66770360-66770379 | Msa0826430:intron | 35.0% | |
| !!! | CGATCCAATGTTTTGATGTT+CGG | + | chr5_3:66770712-66770731 | Msa0826430:CDS | 35.0% |
| TTAGATGCAACAGAAGATGT+TGG | - | chr5_3:66771078-66771097 | None:intergenic | 35.0% | |
| ACTTATCTTCAGTACTTTCC+TGG | - | chr5_3:66771322-66771341 | None:intergenic | 35.0% | |
| ! | AGTAGATGACCTTTAACTTC+AGG | + | chr5_3:66771339-66771358 | Msa0826430:intron | 35.0% |
| TCTCGAAAATACGGGAAATA+AGG | + | chr5_3:66771443-66771462 | Msa0826430:three_prime_UTR | 35.0% | |
| CTCGAAAATACGGGAAATAA+GGG | + | chr5_3:66771444-66771463 | Msa0826430:three_prime_UTR | 35.0% | |
| AGTCCAAACATTGTCTTCAT+GGG | - | chr5_3:66771527-66771546 | None:intergenic | 35.0% | |
| AAGTCCAAACATTGTCTTCA+TGG | - | chr5_3:66771528-66771547 | None:intergenic | 35.0% | |
| GAAAAAACAACTACAACGGT+TGG | - | chr5_3:66771786-66771805 | None:intergenic | 35.0% | |
| ! | AACTCTCTAACCTTTTAGTG+AGG | - | chr5_3:66771808-66771827 | None:intergenic | 35.0% |
| !! | GTCATTGTTTTGTCATTGCA+TGG | + | chr5_3:66771848-66771867 | Msa0826430:three_prime_UTR | 35.0% |
| TTATGATTGCCGCAATTTCG+TGG | + | chr5_3:66764818-66764837 | Msa0826430:exon | 40.0% | |
| TTTCGGAATCCACGAAATTG+CGG | - | chr5_3:66764830-66764849 | None:intergenic | 40.0% | |
| CAATTTCGTGGATTCCGAAA+GGG | + | chr5_3:66764830-66764849 | Msa0826430:CDS | 40.0% | |
| AATTTCGTGGATTCCGAAAG+GGG | + | chr5_3:66764831-66764850 | Msa0826430:CDS | 40.0% | |
| AGAAGGAGGTTCAGCAAAAA+CGG | - | chr5_3:66764872-66764891 | None:intergenic | 40.0% | |
| !!! | CTTTTAAGGGACTGGCTTAT+TGG | + | chr5_3:66765387-66765406 | Msa0826430:intron | 40.0% |
| GGGCCACAAGAAAATTATGA+AGG | + | chr5_3:66765607-66765626 | Msa0826430:intron | 40.0% | |
| TAAAGTCTTGGGTGAAGAGA+TGG | + | chr5_3:66765701-66765720 | Msa0826430:intron | 40.0% | |
| TTTACCAATTGCACCAGCTA+CGG | - | chr5_3:66765905-66765924 | None:intergenic | 40.0% | |
| GCAATTGGTAAACCATCCAA+TGG | + | chr5_3:66765913-66765932 | Msa0826430:CDS | 40.0% | |
| ATCCATGTTGAGATCCTTCA+AGG | - | chr5_3:66765962-66765981 | None:intergenic | 40.0% | |
| TACCTAACTATGTACTCTGC+CGG | + | chr5_3:66766047-66766066 | Msa0826430:intron | 40.0% | |
| ATTACGCCACTGGATAAAAC+CGG | - | chr5_3:66766069-66766088 | None:intergenic | 40.0% | |
| TAATCACTTGTGAGGCTGTT+TGG | + | chr5_3:66766085-66766104 | Msa0826430:intron | 40.0% | |
| GTTTATGAGTTCAGCTACCT+TGG | + | chr5_3:66766315-66766334 | Msa0826430:intron | 40.0% | |
| TATGTGTAGTATCACATGCC+AGG | - | chr5_3:66766386-66766405 | None:intergenic | 40.0% | |
| ! | TTTTGTACGACTAAGGGTCA+AGG | - | chr5_3:66766574-66766593 | None:intergenic | 40.0% |
| ! | CATAAGGTTTGTAGTGTTGG+AGG | - | chr5_3:66767197-66767216 | None:intergenic | 40.0% |
| GATAAGTTCCAACACTTGCA+TGG | + | chr5_3:66767464-66767483 | Msa0826430:intron | 40.0% | |
| AATTTCCACTTTGCACAGCA+TGG | + | chr5_3:66767829-66767848 | Msa0826430:CDS | 40.0% | |
| !! | CTTTTTCTCCTCCTTTAAGG+GGG | - | chr5_3:66767863-66767882 | None:intergenic | 40.0% |
| ! | CCTTTTTCTCCTCCTTTAAG+GGG | - | chr5_3:66767864-66767883 | None:intergenic | 40.0% |
| ! | GACCTTTTTCTCCTCCTTTA+AGG | - | chr5_3:66767866-66767885 | None:intergenic | 40.0% |
| TATGGTAACAGGGAACTTCT+TGG | + | chr5_3:66768154-66768173 | Msa0826430:intron | 40.0% | |
| !! | TTCTTGGCTGTTGGTTCAAT+GGG | + | chr5_3:66768170-66768189 | Msa0826430:CDS | 40.0% |
| TGGGACCATCCATTGAAATT+TGG | + | chr5_3:66768189-66768208 | Msa0826430:CDS | 40.0% | |
| GGGACCATCCATTGAAATTT+GGG | + | chr5_3:66768190-66768209 | Msa0826430:CDS | 40.0% | |
| AGGTCCCAAATTTCAATGGA+TGG | - | chr5_3:66768197-66768216 | None:intergenic | 40.0% | |
| ! | TTTGGTTACCTCTTTTGCTC+TGG | + | chr5_3:66768415-66768434 | Msa0826430:intron | 40.0% |
| !! | ACATGTGCTGTTCTTTTGTG+TGG | + | chr5_3:66768477-66768496 | Msa0826430:intron | 40.0% |
| TGTTGGTCGTCTATAACTGT+TGG | + | chr5_3:66768523-66768542 | Msa0826430:intron | 40.0% | |
| GTTGGTCGTCTATAACTGTT+GGG | + | chr5_3:66768524-66768543 | Msa0826430:intron | 40.0% | |
| GTACTCCTTCAACTTGAATG+TGG | + | chr5_3:66768616-66768635 | Msa0826430:intron | 40.0% | |
| ACTCCTTCAACTTGAATGTG+GGG | + | chr5_3:66768618-66768637 | Msa0826430:intron | 40.0% | |
| !! | AAACCCCACATTCAAGTTGA+AGG | - | chr5_3:66768624-66768643 | None:intergenic | 40.0% |
| CACAAAATCACCGTAATGTG+AGG | + | chr5_3:66768658-66768677 | Msa0826430:intron | 40.0% | |
| CACAAAAACTGTATTGGAGG+AGG | + | chr5_3:66768684-66768703 | Msa0826430:intron | 40.0% | |
| ACTGTATTGGAGGAGGATTT+AGG | + | chr5_3:66768691-66768710 | Msa0826430:intron | 40.0% | |
| AACCATTAGGCTCCATTTAG+GGG | - | chr5_3:66768868-66768887 | None:intergenic | 40.0% | |
| CAAACCATTAGGCTCCATTT+AGG | - | chr5_3:66768870-66768889 | None:intergenic | 40.0% | |
| CTAAATGGAGCCTAATGGTT+TGG | + | chr5_3:66768868-66768887 | Msa0826430:intron | 40.0% | |
| !! | TCTACCTTCTAGTTTGTGGA+TGG | + | chr5_3:66769029-66769048 | Msa0826430:intron | 40.0% |
| TGTACTTGGACTTGAGTGAA+TGG | - | chr5_3:66769062-66769081 | None:intergenic | 40.0% | |
| AGTGAAGACTTATCGAGTCA+GGG | - | chr5_3:66769104-66769123 | None:intergenic | 40.0% | |
| ATAGATGCCATATGCATGTG+AGG | + | chr5_3:66769209-66769228 | Msa0826430:intron | 40.0% | |
| TAGATGCCATATGCATGTGA+GGG | + | chr5_3:66769210-66769229 | Msa0826430:intron | 40.0% | |
| ! | GTTGGTAAATCTAGCTTGGA+AGG | - | chr5_3:66769325-66769344 | None:intergenic | 40.0% |
| TTGCTTGGAACAAGGAATAC+AGG | + | chr5_3:66769540-66769559 | Msa0826430:CDS | 40.0% | |
| TGACAAGCGAGTGAAGATTT+GGG | + | chr5_3:66769719-66769738 | Msa0826430:CDS | 40.0% | |
| ! | AAGATTTGGGATGTTGTTGC+TGG | + | chr5_3:66769732-66769751 | Msa0826430:CDS | 40.0% |
| GGATTGAAAGACATCATGGA+AGG | - | chr5_3:66770061-66770080 | None:intergenic | 40.0% | |
| TTCAATCCACATATCCTCAC+AGG | + | chr5_3:66770073-66770092 | Msa0826430:intron | 40.0% | |
| GATCAAACGAACCACTAAGA+AGG | - | chr5_3:66770136-66770155 | None:intergenic | 40.0% | |
| GTTTGATCATACTGTTGCCT+TGG | + | chr5_3:66770148-66770167 | Msa0826430:CDS | 40.0% | |
| !! | GTGCGTTATGGTTATTTCTG+AGG | + | chr5_3:66770470-66770489 | Msa0826430:intron | 40.0% |
| ATCTTCAAGACTCACCTAAC+AGG | - | chr5_3:66770688-66770707 | None:intergenic | 40.0% | |
| TGTTAGGTGAGTCTTGAAGA+TGG | + | chr5_3:66770687-66770706 | Msa0826430:intron | 40.0% | |
| CAGTCCGAACATCAAAACAT+TGG | - | chr5_3:66770719-66770738 | None:intergenic | 40.0% | |
| TGCCGTATTATAGGATACAG+AGG | - | chr5_3:66770808-66770827 | None:intergenic | 40.0% | |
| CATTAGTGCTGCCGTATTAT+AGG | - | chr5_3:66770817-66770836 | None:intergenic | 40.0% | |
| TTAACCCTACCCTATTGACA+TGG | + | chr5_3:66770892-66770911 | Msa0826430:intron | 40.0% | |
| TGCATGACACCATGTCAATA+GGG | - | chr5_3:66770904-66770923 | None:intergenic | 40.0% | |
| GAGATGCCTTCATCAGATAA+GGG | - | chr5_3:66771425-66771444 | None:intergenic | 40.0% | |
| AGAGATGCCTTCATCAGATA+AGG | - | chr5_3:66771426-66771445 | None:intergenic | 40.0% | |
| !! | GAAGGCATCTCTCGAAAATA+CGG | + | chr5_3:66771434-66771453 | Msa0826430:three_prime_UTR | 40.0% |
| ! | AAGGCATCTCTCGAAAATAC+GGG | + | chr5_3:66771435-66771454 | Msa0826430:three_prime_UTR | 40.0% |
| GTCCAAACATTGTCTTCATG+GGG | - | chr5_3:66771526-66771545 | None:intergenic | 40.0% | |
| TACTCAACTGCGAACAAGTT+GGG | + | chr5_3:66771553-66771572 | Msa0826430:three_prime_UTR | 40.0% | |
| ! | GGTTGCATGTTCCAACATTT+TGG | + | chr5_3:66771574-66771593 | Msa0826430:three_prime_UTR | 40.0% |
| TGCAGAGGATTCCAAAATGT+TGG | - | chr5_3:66771588-66771607 | None:intergenic | 40.0% | |
| AAGGCCCTTCAAAACATGTT+AGG | - | chr5_3:66771755-66771774 | None:intergenic | 40.0% | |
| !! | TTGTTTTGTCATTGCATGGC+AGG | + | chr5_3:66771852-66771871 | Msa0826430:three_prime_UTR | 40.0% |
| GCAATTTCGTGGATTCCGAA+AGG | + | chr5_3:66764829-66764848 | Msa0826430:CDS | 45.0% | |
| TCTGCTTTCGAAACCCCTTT+CGG | - | chr5_3:66764847-66764866 | None:intergenic | 45.0% | |
| GAAGGAGGTTCAGCAAAAAC+GGG | - | chr5_3:66764871-66764890 | None:intergenic | 45.0% | |
| TCATCTCCAACACTCTCACT+AGG | + | chr5_3:66764911-66764930 | Msa0826430:CDS | 45.0% | |
| ! | GATGTACCTAGTGAGAGTGT+TGG | - | chr5_3:66764920-66764939 | None:intergenic | 45.0% |
| CAAGTGATTAACGGCCTGTT+CGG | - | chr5_3:66765274-66765293 | None:intergenic | 45.0% | |
| GGTTGAGTGAAGACCCATTA+TGG | + | chr5_3:66765408-66765427 | Msa0826430:intron | 45.0% | |
| GGGTCGAGAGTAAATTGTGA+CGG | - | chr5_3:66765435-66765454 | None:intergenic | 45.0% | |
| TCCCTGACAGATTACATCAG+AGG | + | chr5_3:66765515-66765534 | Msa0826430:intron | 45.0% | |
| CCCTCTGATGTAATCTGTCA+GGG | - | chr5_3:66765519-66765538 | None:intergenic | 45.0% | |
| CCCTGACAGATTACATCAGA+GGG | + | chr5_3:66765516-66765535 | Msa0826430:intron | 45.0% | |
| TCCCTCTGATGTAATCTGTC+AGG | - | chr5_3:66765520-66765539 | None:intergenic | 45.0% | |
| CTAAGAGTGAAGACCCAGTT+TGG | - | chr5_3:66765634-66765653 | None:intergenic | 45.0% | |
| TTAACCGTAGCTGGTGCAAT+TGG | + | chr5_3:66765898-66765917 | Msa0826430:CDS | 45.0% | |
| TGATATTACCGACGCCTTGA+AGG | + | chr5_3:66765945-66765964 | Msa0826430:CDS | 45.0% | |
| AACCGGCAGAGTACATAGTT+AGG | - | chr5_3:66766052-66766071 | None:intergenic | 45.0% | |
| GAGTTCAGCTACCTTGGTTT+AGG | + | chr5_3:66766321-66766340 | Msa0826430:intron | 45.0% | |
| GTAGTATCACATGCCAGGTT+TGG | - | chr5_3:66766381-66766400 | None:intergenic | 45.0% | |
| AAGGGTCAAGGTTCTGTTCT+AGG | - | chr5_3:66766562-66766581 | None:intergenic | 45.0% | |
| TGATAAACCAAGGCCCTGTT+TGG | - | chr5_3:66767305-66767324 | None:intergenic | 45.0% | |
| GAGTTATTCAGTTCGGGGAA+CGG | + | chr5_3:66767385-66767404 | Msa0826430:intron | 45.0% | |
| TCAAGTATCCATACCTGCCA+GGG | - | chr5_3:66767753-66767772 | None:intergenic | 45.0% | |
| CAAGTTCATATCGCGGGTAT+TGG | - | chr5_3:66767781-66767800 | None:intergenic | 45.0% | |
| GCTGTGCAAAGTGGAAATTC+CGG | - | chr5_3:66767828-66767847 | None:intergenic | 45.0% | |
| CCCCTTAAAGGAGGAGAAAA+AGG | + | chr5_3:66767861-66767880 | Msa0826430:CDS | 45.0% | |
| !! | ATGATGCAAAGGCATCAAGC+AGG | - | chr5_3:66768110-66768129 | None:intergenic | 45.0% |
| !! | CTTCTTGGCTGTTGGTTCAA+TGG | + | chr5_3:66768169-66768188 | Msa0826430:CDS | 45.0% |
| TGTTGGGTGGCAAAGAGAAA+AGG | + | chr5_3:66768326-66768345 | Msa0826430:CDS | 45.0% | |
| ! | AAGGAGTACGACTTGGAAGT+TGG | - | chr5_3:66768605-66768624 | None:intergenic | 45.0% |
| ! | CAAGTTGAAGGAGTACGACT+TGG | - | chr5_3:66768612-66768631 | None:intergenic | 45.0% |
| GTATTGGAGGAGGATTTAGG+AGG | + | chr5_3:66768694-66768713 | Msa0826430:intron | 45.0% | |
| AACCCCTAAATGGAGCCTAA+TGG | + | chr5_3:66768863-66768882 | Msa0826430:intron | 45.0% | |
| ! | AATGGAGCCTAATGGTTTGG+TGG | + | chr5_3:66768871-66768890 | Msa0826430:intron | 45.0% |
| !! | ATGGAGCCTAATGGTTTGGT+GGG | + | chr5_3:66768872-66768891 | Msa0826430:intron | 45.0% |
| ACACAACCCACCAAACCATT+AGG | - | chr5_3:66768881-66768900 | None:intergenic | 45.0% | |
| !! | TAATGGTTTGGTGGGTTGTG+TGG | + | chr5_3:66768880-66768899 | Msa0826430:intron | 45.0% |
| GAGTGAAGACTTATCGAGTC+AGG | - | chr5_3:66769105-66769124 | None:intergenic | 45.0% | |
| CATTGACCCTCACATGCATA+TGG | - | chr5_3:66769219-66769238 | None:intergenic | 45.0% | |
| TAGCTTGGAAGGCTTCTGTT+GGG | - | chr5_3:66769314-66769333 | None:intergenic | 45.0% | |
| !! | AGCAAGACCAAGTACTGAGT+CGG | - | chr5_3:66769525-66769544 | None:intergenic | 45.0% |
| !! | ACTCAGTACTTGGTCTTGCT+TGG | + | chr5_3:66769525-66769544 | Msa0826430:CDS | 45.0% |
| !! | ACTTGGTCTTGCTTGGAACA+AGG | + | chr5_3:66769532-66769551 | Msa0826430:CDS | 45.0% |
| CTGACAAGCGAGTGAAGATT+TGG | + | chr5_3:66769718-66769737 | Msa0826430:CDS | 45.0% | |
| CTTGAACCTGTGAGGATATG+TGG | - | chr5_3:66770082-66770101 | None:intergenic | 45.0% | |
| GCACAACAGATCCTTCTTAG+TGG | + | chr5_3:66770122-66770141 | Msa0826430:CDS | 45.0% | |
| TGATGTAGAGAGCTTGGCAT+GGG | + | chr5_3:66770421-66770440 | Msa0826430:CDS | 45.0% | |
| !! | ACAAAAGAGTGCTCAGTGTG+TGG | - | chr5_3:66770449-66770468 | None:intergenic | 45.0% |
| ! | ACACACTGAGCACTCTTTTG+TGG | + | chr5_3:66770448-66770467 | Msa0826430:CDS | 45.0% |
| ! | CACTCTTTTGTGGTGCGTTA+TGG | + | chr5_3:66770458-66770477 | Msa0826430:intron | 45.0% |
| ATTCTGCACAGATGTGGCAT+TGG | - | chr5_3:66770748-66770767 | None:intergenic | 45.0% | |
| AGTAGCATTCTGCACAGATG+TGG | - | chr5_3:66770754-66770773 | None:intergenic | 45.0% | |
| GACACCATGTCAATAGGGTA+GGG | - | chr5_3:66770899-66770918 | None:intergenic | 45.0% | |
| TGACACCATGTCAATAGGGT+AGG | - | chr5_3:66770900-66770919 | None:intergenic | 45.0% | |
| CTGCATGACACCATGTCAAT+AGG | - | chr5_3:66770905-66770924 | None:intergenic | 45.0% | |
| ATCTGCAGCATTCGGTATAC+AGG | - | chr5_3:66770991-66771010 | None:intergenic | 45.0% | |
| GTATACCGAATGCTGCAGAT+TGG | + | chr5_3:66770991-66771010 | Msa0826430:intron | 45.0% | |
| GAGTTCCAATCTGCAGCATT+CGG | - | chr5_3:66770999-66771018 | None:intergenic | 45.0% | |
| ATCTCCTTCTCCTTCTCAAG+AGG | + | chr5_3:66771267-66771286 | Msa0826430:three_prime_UTR | 45.0% | |
| TTGTCCTCTTGAGAAGGAGA+AGG | - | chr5_3:66771274-66771293 | None:intergenic | 45.0% | |
| !! | AATGGGTTGTCCTCTTGAGA+AGG | - | chr5_3:66771280-66771299 | None:intergenic | 45.0% |
| AGAGGACAACCCATTCTTGT+TGG | + | chr5_3:66771285-66771304 | Msa0826430:three_prime_UTR | 45.0% | |
| CAACCCATTCTTGTTGGCAT+TGG | + | chr5_3:66771291-66771310 | Msa0826430:three_prime_UTR | 45.0% | |
| CCTCCAATGCCAACAAGAAT+GGG | - | chr5_3:66771297-66771316 | None:intergenic | 45.0% | |
| AACATTGTCTTCATGGGGCA+GGG | - | chr5_3:66771521-66771540 | None:intergenic | 45.0% | |
| AAACATTGTCTTCATGGGGC+AGG | - | chr5_3:66771522-66771541 | None:intergenic | 45.0% | |
| TGCCCCATGAAGACAATGTT+TGG | + | chr5_3:66771521-66771540 | Msa0826430:three_prime_UTR | 45.0% | |
| CTACTCAACTGCGAACAAGT+TGG | + | chr5_3:66771552-66771571 | Msa0826430:three_prime_UTR | 45.0% | |
| ! | AAGACTTGCGCATTTTGCAG+AGG | - | chr5_3:66771603-66771622 | None:intergenic | 45.0% |
| AACTACAACGGTTGGGCATT+GGG | - | chr5_3:66771778-66771797 | None:intergenic | 45.0% | |
| TCATTGCATGGCAGGAACAT+CGG | + | chr5_3:66771860-66771879 | Msa0826430:three_prime_UTR | 45.0% | |
| !! | ATATAAAAAAAAAATTCATA+AGG | - | chr5_3:66767213-66767232 | None:intergenic | 5.0% |
| !!! | TTTATTTTTTAAAATCTAAA+AGG | - | chr5_3:66769387-66769406 | None:intergenic | 5.0% |
| TGTACACGATACGGTCAGAG+TGG | - | chr5_3:66764792-66764811 | None:intergenic | 50.0% | |
| GATTAACGGCCTGTTCGGAT+TGG | - | chr5_3:66765269-66765288 | None:intergenic | 50.0% | |
| CGAACAGGCCGTTAATCACT+TGG | + | chr5_3:66765272-66765291 | Msa0826430:intron | 50.0% | |
| CAGCAGCGCCAAGTGATTAA+CGG | - | chr5_3:66765283-66765302 | None:intergenic | 50.0% | |
| GCACATGCTTTAACCGTAGC+TGG | + | chr5_3:66765889-66765908 | Msa0826430:CDS | 50.0% | |
| GTTGAGATCCTTCAAGGCGT+CGG | - | chr5_3:66765956-66765975 | None:intergenic | 50.0% | |
| CGCCTTGAAGGATCTCAACA+TGG | + | chr5_3:66765957-66765976 | Msa0826430:CDS | 50.0% | |
| !!! | ACTCTGCCGGTTTTATCCAG+TGG | + | chr5_3:66766060-66766079 | Msa0826430:intron | 50.0% |
| CTCACAAGTGATTACGCCAC+TGG | - | chr5_3:66766079-66766098 | None:intergenic | 50.0% | |
| CAGTGGCGTAATCACTTGTG+AGG | + | chr5_3:66766077-66766096 | Msa0826430:intron | 50.0% | |
| CTTAGACTTGCAAGCGAAGC+TGG | + | chr5_3:66766502-66766521 | Msa0826430:intron | 50.0% | |
| TCCAGAGTGTGGTAAGGAGA+AGG | - | chr5_3:66767142-66767161 | None:intergenic | 50.0% | |
| TGATGGTCCAGAGTGTGGTA+AGG | - | chr5_3:66767148-66767167 | None:intergenic | 50.0% | |
| ! | TGTTGTTTGTGCGCGTACTG+AGG | + | chr5_3:66767602-66767621 | Msa0826430:CDS | 50.0% |
| ACATGTTTATCTGCCCTGGC+AGG | + | chr5_3:66767737-66767756 | Msa0826430:intron | 50.0% | |
| TTTATCTGCCCTGGCAGGTA+TGG | + | chr5_3:66767742-66767761 | Msa0826430:intron | 50.0% | |
| CTCAAGTATCCATACCTGCC+AGG | - | chr5_3:66767754-66767773 | None:intergenic | 50.0% | |
| CTGGCAGGTATGGATACTTG+AGG | + | chr5_3:66767752-66767771 | Msa0826430:intron | 50.0% | |
| TCAAGCCATGCTGTGCAAAG+TGG | - | chr5_3:66767837-66767856 | None:intergenic | 50.0% | |
| TGGCTTGATTGCCCCCTTAA+AGG | + | chr5_3:66767849-66767868 | Msa0826430:CDS | 50.0% | |
| CTTGATTGCCCCCTTAAAGG+AGG | + | chr5_3:66767852-66767871 | Msa0826430:CDS | 50.0% | |
| ACAGGGAACTTCTTGGCTGT+TGG | + | chr5_3:66768161-66768180 | Msa0826430:intron | 50.0% | |
| TGATGAGGTAGAGCCATGTG+TGG | + | chr5_3:66768303-66768322 | Msa0826430:CDS | 50.0% | |
| GTAGAGCCATGTGTGGTGTT+GGG | + | chr5_3:66768310-66768329 | Msa0826430:CDS | 50.0% | |
| CAGCGAATCCAGAGCAAAAG+AGG | - | chr5_3:66768426-66768445 | None:intergenic | 50.0% | |
| CTAGCTTGGAAGGCTTCTGT+TGG | - | chr5_3:66769315-66769334 | None:intergenic | 50.0% | |
| !! | AGTCACACCGACTCAGTACT+TGG | + | chr5_3:66769515-66769534 | Msa0826430:CDS | 50.0% |
| AGCAACTGCTTGAACCTGTG+AGG | - | chr5_3:66770090-66770109 | None:intergenic | 50.0% | |
| CACAGGTTCAAGCAGTTGCT+TGG | + | chr5_3:66770090-66770109 | Msa0826430:intron | 50.0% | |
| CACGTATAGCCAGAATGCGA+CGG | - | chr5_3:66770389-66770408 | None:intergenic | 50.0% | |
| ! | GCATTCTGGCTATACGTGGT+CGG | + | chr5_3:66770391-66770410 | Msa0826430:CDS | 50.0% |
| CTGATGTAGAGAGCTTGGCA+TGG | + | chr5_3:66770420-66770439 | Msa0826430:CDS | 50.0% | |
| CTAACGAGGGGAAGTTAGTG+TGG | - | chr5_3:66770569-66770588 | None:intergenic | 50.0% | |
| GCTTCTTGCGACTGGATCTA+TGG | + | chr5_3:66770924-66770943 | Msa0826430:intron | 50.0% | |
| ! | CCCATTCTTGTTGGCATTGG+AGG | + | chr5_3:66771294-66771313 | Msa0826430:three_prime_UTR | 50.0% |
| GCCTCCAATGCCAACAAGAA+TGG | - | chr5_3:66771298-66771317 | None:intergenic | 50.0% | |
| GGGACACCCTTATCTGATGA+AGG | + | chr5_3:66771416-66771435 | Msa0826430:three_prime_UTR | 50.0% | |
| CAACTACAACGGTTGGGCAT+TGG | - | chr5_3:66771779-66771798 | None:intergenic | 50.0% | |
| ACACGATACGGTCAGAGTGG+TGG | - | chr5_3:66764789-66764808 | None:intergenic | 55.0% | |
| GCCTTCTCCTTACCACACTC+TGG | + | chr5_3:66767138-66767157 | Msa0826430:intron | 55.0% | |
| ! | GAAGGTGATGGTCCAGAGTG+TGG | - | chr5_3:66767153-66767172 | None:intergenic | 55.0% |
| CACTCTGGACCATCACCTTC+TGG | + | chr5_3:66767153-66767172 | Msa0826430:intron | 55.0% | |
| TCTGGACCATCACCTTCTGG+TGG | + | chr5_3:66767156-66767175 | Msa0826430:intron | 55.0% | |
| CTGGACCATCACCTTCTGGT+GGG | + | chr5_3:66767157-66767176 | Msa0826430:intron | 55.0% | |
| TGATGCCCACCAGAAGGTGA+TGG | - | chr5_3:66767165-66767184 | None:intergenic | 55.0% | |
| !! | GAGTACTGATGCCCACCAGA+AGG | - | chr5_3:66767171-66767190 | None:intergenic | 55.0% |
| GGCTTATCCAAACAGGGCCT+TGG | + | chr5_3:66767295-66767314 | Msa0826430:intron | 55.0% | |
| GGTAGAGCCATGTGTGGTGT+TGG | + | chr5_3:66768309-66768328 | Msa0826430:CDS | 55.0% | |
| TTGCCACCCAACACCACACA+TGG | - | chr5_3:66768319-66768338 | None:intergenic | 55.0% | |
| TTTAGGGGTTGCGAGGGGAA+GGG | - | chr5_3:66768853-66768872 | None:intergenic | 55.0% | |
| ATTTAGGGGTTGCGAGGGGA+AGG | - | chr5_3:66768854-66768873 | None:intergenic | 55.0% | |
| TTCCCCTCGCAACCCCTAAA+TGG | + | chr5_3:66768853-66768872 | Msa0826430:intron | 55.0% | |
| CTCCATTTAGGGGTTGCGAG+GGG | - | chr5_3:66768858-66768877 | None:intergenic | 55.0% | |
| GCTCCATTTAGGGGTTGCGA+GGG | - | chr5_3:66768859-66768878 | None:intergenic | 55.0% | |
| ! | CGTCGCATTCTGGCTATACG+TGG | + | chr5_3:66770387-66770406 | Msa0826430:CDS | 55.0% |
| !! | CAGCGCTGATGTAGAGAGCT+TGG | + | chr5_3:66770415-66770434 | Msa0826430:CDS | 55.0% |
| GTCATGCAGCTTCTTGCGAC+TGG | + | chr5_3:66770916-66770935 | Msa0826430:intron | 55.0% | |
| ! | TTGTTGGCATTGGAGGCTCC+AGG | + | chr5_3:66771301-66771320 | Msa0826430:three_prime_UTR | 55.0% |
| !! | ACAACGGTTGGGCATTGGGA+AGG | - | chr5_3:66771774-66771793 | None:intergenic | 55.0% |
| TTCTTCTTCTCTCGCGCCCC+CGG | + | chr5_3:66764736-66764755 | Msa0826430:five_prime_UTR | 60.0% | |
| ACAATACCGCCGCACCGTTC+CGG | + | chr5_3:66764761-66764780 | Msa0826430:five_prime_UTR | 60.0% | |
| ! | TCAGAGTGGTGGTGCCGGAA+CGG | - | chr5_3:66764778-66764797 | None:intergenic | 60.0% |
| ! | TACGGTCAGAGTGGTGGTGC+CGG | - | chr5_3:66764783-66764802 | None:intergenic | 60.0% |
| ! | GAGCCATGTGTGGTGTTGGG+TGG | + | chr5_3:66768313-66768332 | Msa0826430:CDS | 60.0% |
| !! | AGGGAGGGCTTTGGGAGGAA+GGG | - | chr5_3:66768829-66768848 | None:intergenic | 60.0% |
| !! | AAGGGAGGGCTTTGGGAGGA+AGG | - | chr5_3:66768830-66768849 | None:intergenic | 60.0% |
| GGAAGGGAAGGGAGGGCTTT+GGG | - | chr5_3:66768837-66768856 | None:intergenic | 60.0% | |
| GGCTCCATTTAGGGGTTGCG+AGG | - | chr5_3:66768860-66768879 | None:intergenic | 60.0% | |
| GTAAGGACGCCGTCGCATTC+TGG | + | chr5_3:66770377-66770396 | Msa0826430:CDS | 60.0% | |
| TGCGGCGGTATTGTTGCCGG+GGG | - | chr5_3:66764755-66764774 | None:intergenic | 65.0% | |
| GTGCGGCGGTATTGTTGCCG+GGG | - | chr5_3:66764756-66764775 | None:intergenic | 65.0% | |
| GGTGCGGCGGTATTGTTGCC+GGG | - | chr5_3:66764757-66764776 | None:intergenic | 65.0% | |
| CGGTGCGGCGGTATTGTTGC+CGG | - | chr5_3:66764758-66764777 | None:intergenic | 65.0% | |
| !! | AGGGAAGGGAGGGCTTTGGG+AGG | - | chr5_3:66768834-66768853 | None:intergenic | 65.0% |
| GGGAAGGGAAGGGAGGGCTT+TGG | - | chr5_3:66768838-66768857 | None:intergenic | 65.0% | |
| TGCGAGGGGAAGGGAAGGGA+GGG | - | chr5_3:66768844-66768863 | None:intergenic | 65.0% | |
| TTGCGAGGGGAAGGGAAGGG+AGG | - | chr5_3:66768845-66768864 | None:intergenic | 65.0% | |
| GGGTTGCGAGGGGAAGGGAA+GGG | - | chr5_3:66768848-66768867 | None:intergenic | 65.0% | |
| ! | GTGGTGGTGCCGGAACGGTG+CGG | - | chr5_3:66764773-66764792 | None:intergenic | 70.0% |
| GGGGTTGCGAGGGGAAGGGA+AGG | - | chr5_3:66768849-66768868 | None:intergenic | 70.0% | |
| ! | GTGGTGCCGGAACGGTGCGG+CGG | - | chr5_3:66764770-66764789 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 66764707 | 66771959 | 66764707 | ID=Msa0826430;Name=Msa0826430 |
| chr5_3 | mRNA | 66764707 | 66771959 | 66764707 | ID=Msa0826430-mRNA-1;Parent=Msa0826430;Name=Msa0826430-mRNA-1;_AED=0.07;_eAED=0.07;_QI=113|0.8|0.87|0.93|0.86|0.87|16|671|403 |
| chr5_3 | exon | 66764707 | 66764932 | 66764707 | ID=Msa0826430-mRNA-1:exon:20931;Parent=Msa0826430-mRNA-1 |
| chr5_3 | exon | 66765834 | 66766006 | 66765834 | ID=Msa0826430-mRNA-1:exon:20932;Parent=Msa0826430-mRNA-1 |
| chr5_3 | exon | 66766987 | 66767015 | 66766987 | ID=Msa0826430-mRNA-1:exon:20933;Parent=Msa0826430-mRNA-1 |
| chr5_3 | exon | 66767546 | 66767644 | 66767546 | ID=Msa0826430-mRNA-1:exon:20934;Parent=Msa0826430-mRNA-1 |
| chr5_3 | exon | 66767759 | 66767882 | 66767759 | ID=Msa0826430-mRNA-1:exon:20935;Parent=Msa0826430-mRNA-1 |
| chr5_3 | exon | 66768165 | 66768223 | 66768165 | ID=Msa0826430-mRNA-1:exon:20936;Parent=Msa0826430-mRNA-1 |
| chr5_3 | exon | 66768301 | 66768372 | 66768301 | ID=Msa0826430-mRNA-1:exon:20937;Parent=Msa0826430-mRNA-1 |
| chr5_3 | exon | 66769491 | 66769561 | 66769491 | ID=Msa0826430-mRNA-1:exon:20938;Parent=Msa0826430-mRNA-1 |
| chr5_3 | exon | 66769695 | 66769791 | 66769695 | ID=Msa0826430-mRNA-1:exon:20939;Parent=Msa0826430-mRNA-1 |
| chr5_3 | exon | 66770095 | 66770169 | 66770095 | ID=Msa0826430-mRNA-1:exon:20940;Parent=Msa0826430-mRNA-1 |
| chr5_3 | exon | 66770371 | 66770469 | 66770371 | ID=Msa0826430-mRNA-1:exon:20941;Parent=Msa0826430-mRNA-1 |
| chr5_3 | exon | 66770693 | 66770835 | 66770693 | ID=Msa0826430-mRNA-1:exon:20942;Parent=Msa0826430-mRNA-1 |
| chr5_3 | exon | 66770925 | 66770959 | 66770925 | ID=Msa0826430-mRNA-1:exon:20943;Parent=Msa0826430-mRNA-1 |
| chr5_3 | exon | 66771049 | 66771110 | 66771049 | ID=Msa0826430-mRNA-1:exon:20944;Parent=Msa0826430-mRNA-1 |
| chr5_3 | exon | 66771252 | 66771335 | 66771252 | ID=Msa0826430-mRNA-1:exon:20945;Parent=Msa0826430-mRNA-1 |
| chr5_3 | exon | 66771412 | 66771959 | 66771412 | ID=Msa0826430-mRNA-1:exon:20946;Parent=Msa0826430-mRNA-1 |
| chr5_3 | five_prime_UTR | 66764707 | 66764819 | 66764707 | ID=Msa0826430-mRNA-1:five_prime_utr;Parent=Msa0826430-mRNA-1 |
| chr5_3 | CDS | 66764820 | 66764932 | 66764820 | ID=Msa0826430-mRNA-1:cds;Parent=Msa0826430-mRNA-1 |
| chr5_3 | CDS | 66765834 | 66766006 | 66765834 | ID=Msa0826430-mRNA-1:cds;Parent=Msa0826430-mRNA-1 |
| chr5_3 | CDS | 66766987 | 66767015 | 66766987 | ID=Msa0826430-mRNA-1:cds;Parent=Msa0826430-mRNA-1 |
| chr5_3 | CDS | 66767546 | 66767644 | 66767546 | ID=Msa0826430-mRNA-1:cds;Parent=Msa0826430-mRNA-1 |
| chr5_3 | CDS | 66767759 | 66767882 | 66767759 | ID=Msa0826430-mRNA-1:cds;Parent=Msa0826430-mRNA-1 |
| chr5_3 | CDS | 66768165 | 66768223 | 66768165 | ID=Msa0826430-mRNA-1:cds;Parent=Msa0826430-mRNA-1 |
| chr5_3 | CDS | 66768301 | 66768372 | 66768301 | ID=Msa0826430-mRNA-1:cds;Parent=Msa0826430-mRNA-1 |
| chr5_3 | CDS | 66769491 | 66769561 | 66769491 | ID=Msa0826430-mRNA-1:cds;Parent=Msa0826430-mRNA-1 |
| chr5_3 | CDS | 66769695 | 66769791 | 66769695 | ID=Msa0826430-mRNA-1:cds;Parent=Msa0826430-mRNA-1 |
| chr5_3 | CDS | 66770095 | 66770169 | 66770095 | ID=Msa0826430-mRNA-1:cds;Parent=Msa0826430-mRNA-1 |
| chr5_3 | CDS | 66770371 | 66770469 | 66770371 | ID=Msa0826430-mRNA-1:cds;Parent=Msa0826430-mRNA-1 |
| chr5_3 | CDS | 66770693 | 66770835 | 66770693 | ID=Msa0826430-mRNA-1:cds;Parent=Msa0826430-mRNA-1 |
| chr5_3 | CDS | 66770925 | 66770959 | 66770925 | ID=Msa0826430-mRNA-1:cds;Parent=Msa0826430-mRNA-1 |
| chr5_3 | CDS | 66771049 | 66771071 | 66771049 | ID=Msa0826430-mRNA-1:cds;Parent=Msa0826430-mRNA-1 |
| chr5_3 | three_prime_UTR | 66771072 | 66771110 | 66771072 | ID=Msa0826430-mRNA-1:three_prime_utr;Parent=Msa0826430-mRNA-1 |
| chr5_3 | three_prime_UTR | 66771252 | 66771335 | 66771252 | ID=Msa0826430-mRNA-1:three_prime_utr;Parent=Msa0826430-mRNA-1 |
| chr5_3 | three_prime_UTR | 66771412 | 66771959 | 66771412 | ID=Msa0826430-mRNA-1:three_prime_utr;Parent=Msa0826430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
