Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0621210 | AES72821.1 | 96.344 | 465 | 4 | 1 | 1 | 465 | 48 | 499 | 0.0 | 908 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0621210 | sp|Q9FKT8|COX15_ARATH | 76.773 | 409 | 82 | 1 | 57 | 465 | 60 | 455 | 0.0 | 632 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0621210 | Msa0826430 | 0.800448 | 1.434127e-48 | -8.615850e-47 |
| Msa0621210 | Msa1071040 | 0.808410 | 3.139733e-50 | -8.615850e-47 |
| Msa0621210 | Msa1118440 | 0.824317 | 8.617700e-54 | -8.615850e-47 |
| Msa0621210 | Msa1159030 | 0.810814 | 9.557209e-51 | -8.615850e-47 |
| Msa0621210 | Msa1340560 | 0.824992 | 5.975177e-54 | -8.615850e-47 |
| Msa0621210 | Msa1453760 | 0.932624 | 6.438183e-95 | -8.615850e-47 |
| Msa0517940 | Msa0621210 | 0.804299 | 2.308814e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0621210 | MtrunA17_Chr3g0129841 | 96.344 | 465 | 4 | 1 | 1 | 465 | 1 | 452 | 0.0 | 905 |
| Msa0621210 | MtrunA17_Chr5g0447211 | 86.765 | 476 | 35 | 7 | 1 | 465 | 1 | 459 | 0.0 | 793 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0621210 | AT5G56090.1 | 76.773 | 409 | 82 | 1 | 57 | 465 | 60 | 455 | 0.0 | 632 |
Find 159 sgRNAs with CRISPR-Local
Find 279 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAGAATGGCTGGTTGTTTA+AGG | 0.156169 | 4_2:-73163722 | Msa0621210:three_prime_UTR |
| CTATTTACTGCGGTCTCTTT+TGG | 0.194502 | 4_2:-73165078 | Msa0621210:CDS |
| ATAAGGCACTCACTGAAATT+AGG | 0.203303 | 4_2:+73164361 | None:intergenic |
| CGCGCCGCCGCCACCGCCAC+TGG | 0.220692 | 4_2:-73167405 | Msa0621210:five_prime_UTR |
| CTTTGGCATGGCATCTGTTC+AGG | 0.249061 | 4_2:-73164280 | Msa0621210:intron |
| AGTTGAGACTATTATTATTC+AGG | 0.264715 | 4_2:-73163945 | Msa0621210:three_prime_UTR |
| AAGAATTCAAGTTCATATAT+TGG | 0.279114 | 4_2:-73165441 | Msa0621210:CDS |
| GTCTCTGGTGCATTTGTTGC+AGG | 0.281738 | 4_2:-73164938 | Msa0621210:CDS |
| GATGGTTAAAAGTGGTTTAG+AGG | 0.285283 | 4_2:-73165260 | Msa0621210:intron |
| CGGTGGCGGCGGCGCGTGGC+AGG | 0.286601 | 4_2:+73167412 | None:intergenic |
| GTGGCGGCGGCGCGTGGCAG+GGG | 0.288953 | 4_2:+73167414 | None:intergenic |
| CTAAGAGTTTCTGCTTTGTT+TGG | 0.292561 | 4_2:-73165316 | Msa0621210:CDS |
| GTTTGGCCTGGGTGCCGGGC+AGG | 0.295557 | 4_2:-73165299 | Msa0621210:CDS |
| TCACTTTACCGCTTGTATTC+AGG | 0.298272 | 4_2:+73165854 | None:intergenic |
| CTCATATGTACCTGTTTCAT+TGG | 0.300963 | 4_2:-73164098 | Msa0621210:CDS |
| AAAGTACCTTAGGAATATTA+TGG | 0.303428 | 4_2:+73166930 | None:intergenic |
| GCGGCGGCGCGTGGCAGGGG+AGG | 0.308288 | 4_2:+73167417 | None:intergenic |
| GTTTCTAAGACGGTGTCTGC+TGG | 0.323987 | 4_2:-73166112 | Msa0621210:CDS |
| AGTTTCTGCTTTGTTTGGCC+TGG | 0.325487 | 4_2:-73165311 | Msa0621210:CDS |
| GCTTTGTTTGGCCTGGGTGC+CGG | 0.332317 | 4_2:-73165304 | Msa0621210:CDS |
| TCTGTGATCGGAGGCATCTT+TGG | 0.335894 | 4_2:-73164297 | Msa0621210:CDS |
| GGTGGCGGCGGCGCGTGGCA+GGG | 0.338845 | 4_2:+73167413 | None:intergenic |
| CACAGAAGGTGGTTGGAATA+TGG | 0.346396 | 4_2:-73166039 | Msa0621210:CDS |
| CTTTGTTTGGCCTGGGTGCC+GGG | 0.347622 | 4_2:-73165303 | Msa0621210:CDS |
| TTCATATATTGGATGGAGTA+TGG | 0.349375 | 4_2:-73165430 | Msa0621210:CDS |
| GGCGGCGCGTGGCAGGGGAG+GGG | 0.353046 | 4_2:+73167419 | None:intergenic |
| TAATTTCAGTGAGTGCCTTA+TGG | 0.353453 | 4_2:-73164359 | Msa0621210:CDS |
| AAAGCCAGTGGCGGTGGCGG+CGG | 0.368260 | 4_2:+73167401 | None:intergenic |
| CGGCGGCGCGTGGCAGGGGA+GGG | 0.371904 | 4_2:+73167418 | None:intergenic |
| CTTGAATGATTGTTGTTGTA+TGG | 0.372902 | 4_2:+73167000 | None:intergenic |
| CTGGTCTTTCAATGACTGAT+TGG | 0.376044 | 4_2:-73165949 | Msa0621210:CDS |
| GGTGCCGGGCAGGGTCTCAT+TGG | 0.377328 | 4_2:-73165289 | Msa0621210:CDS |
| TTTGGCCTGGGTGCCGGGCA+GGG | 0.387716 | 4_2:-73165298 | Msa0621210:CDS |
| AAATTCGGTCGGTGGACAAT+TGG | 0.388965 | 4_2:+73163897 | None:intergenic |
| CTGTCGAATATTATTGATGA+TGG | 0.390093 | 4_2:-73163684 | Msa0621210:three_prime_UTR |
| GTTTCTGCTTTGTTTGGCCT+GGG | 0.391846 | 4_2:-73165310 | Msa0621210:CDS |
| GGCTCTTCGGCTCTGCTGCA+TGG | 0.395595 | 4_2:-73166018 | Msa0621210:CDS |
| ATGGTTGTCAACAAGAAAAC+TGG | 0.401662 | 4_2:-73164340 | Msa0621210:CDS |
| TAAGGCACTCACTGAAATTA+GGG | 0.406985 | 4_2:+73164362 | None:intergenic |
| ACGAAAGAAATGGGTGGAAA+TGG | 0.411067 | 4_2:+73166964 | None:intergenic |
| AGGTGAGCTGCGAGACGATA+AGG | 0.414513 | 4_2:+73165115 | None:intergenic |
| TGCTGCATGGGTGTTTACTA+TGG | 0.415471 | 4_2:-73166005 | Msa0621210:CDS |
| GGCTGAGAATATTCAGTTGG+TGG | 0.416405 | 4_2:+73165148 | None:intergenic |
| GTGGCGGTGGCGGCGGCGCG+TGG | 0.426527 | 4_2:+73167408 | None:intergenic |
| CTGCAATCTCTTTGAGCTGA+GGG | 0.429631 | 4_2:+73167470 | None:intergenic |
| TTTCTAAGACGGTGTCTGCT+GGG | 0.431255 | 4_2:-73166111 | Msa0621210:CDS |
| CCGGGCAGGGTCTCATTGGC+TGG | 0.436364 | 4_2:-73165285 | Msa0621210:CDS |
| TCATATGTACCTGTTTCATT+GGG | 0.436558 | 4_2:-73164097 | Msa0621210:CDS |
| ATCGGAAAGTACGAAAGAAA+TGG | 0.436920 | 4_2:+73166954 | None:intergenic |
| GTTTGGTTACAGGTCACCTT+GGG | 0.440175 | 4_2:-73164136 | Msa0621210:intron |
| TTTCAACCCCTCGTTATGTA+TGG | 0.447927 | 4_2:+73166087 | None:intergenic |
| AAGTACCTTAGGAATATTAT+GGG | 0.454815 | 4_2:+73166931 | None:intergenic |
| AGTGATTCAGCCGGTGGCTC+AGG | 0.456013 | 4_2:+73165034 | None:intergenic |
| AGTCATTGAAAGACCAGATC+TGG | 0.459275 | 4_2:+73165955 | None:intergenic |
| GGGTTGCAGTTGCAAGGATC+CGG | 0.461286 | 4_2:+73164382 | None:intergenic |
| GTGTTTACTATGGTCATACT+TGG | 0.461574 | 4_2:-73165995 | Msa0621210:CDS |
| AAGACCAGATCTGGTGAGTC+TGG | 0.463516 | 4_2:+73165964 | None:intergenic |
| TTCCGAAGATGGGTGATACA+TGG | 0.467914 | 4_2:-73164774 | Msa0621210:CDS |
| TGTTTACTATGGTCATACTT+GGG | 0.468604 | 4_2:-73165994 | Msa0621210:CDS |
| TCATATCAATTGCATCATCA+TGG | 0.469035 | 4_2:+73163841 | None:intergenic |
| AGGATGAGAGAAAGGAATTG+TGG | 0.470689 | 4_2:+73167027 | None:intergenic |
| GTGGTTGGAATATGGCTCTT+CGG | 0.471056 | 4_2:-73166031 | Msa0621210:CDS |
| CCAGCCAATGAGACCCTGCC+CGG | 0.472748 | 4_2:+73165285 | None:intergenic |
| TGGTGGAGAGATAAAATGTT+TGG | 0.475471 | 4_2:-73167121 | Msa0621210:exon |
| GGGTCTCATTGGCTGGTGGA+TGG | 0.475646 | 4_2:-73165278 | Msa0621210:CDS |
| GGATGAGAGAAAGGAATTGT+GGG | 0.480774 | 4_2:+73167028 | None:intergenic |
| AATGACTGATTGGAAATTCA+CGG | 0.482925 | 4_2:-73165939 | Msa0621210:CDS |
| ATCCATGTATCACCCATCTT+CGG | 0.483371 | 4_2:+73164772 | None:intergenic |
| TTAACCAGACTCACCAGATC+TGG | 0.485033 | 4_2:-73165968 | Msa0621210:CDS |
| ACTTCTCAAATCGCTGCCTC+AGG | 0.487353 | 4_2:-73163993 | Msa0621210:CDS |
| CAAGGAAGAGGAGTCTAGAA+TGG | 0.487497 | 4_2:-73163736 | Msa0621210:three_prime_UTR |
| TGTGCAGTACCCAATGAAAC+AGG | 0.491136 | 4_2:+73164088 | None:intergenic |
| GCTCTTCGGCTCTGCTGCAT+GGG | 0.492096 | 4_2:-73166017 | Msa0621210:CDS |
| GTTTACTATGGTCATACTTG+GGG | 0.495384 | 4_2:-73165993 | Msa0621210:CDS |
| GGGTTGAAACTGCTCGTGAC+AGG | 0.495776 | 4_2:-73166073 | Msa0621210:CDS |
| ATGGAAGAAGGATGAGAGAA+AGG | 0.500541 | 4_2:+73167019 | None:intergenic |
| GTTGGTCTTACTGCTGTCTC+TGG | 0.501689 | 4_2:-73164953 | Msa0621210:CDS |
| ATTCAAGTTCATATATTGGA+TGG | 0.507471 | 4_2:-73165437 | Msa0621210:CDS |
| TGTTGTTATGCCTGAGCCAC+CGG | 0.507525 | 4_2:-73165044 | Msa0621210:CDS |
| TGGAGTATGGACATCGTATG+TGG | 0.508780 | 4_2:-73165417 | Msa0621210:CDS |
| TTATGAAGAAAATATGAATA+CGG | 0.509606 | 4_2:+73165364 | None:intergenic |
| CCTGCAGTCCGGTCTGTGAT+CGG | 0.510812 | 4_2:-73164309 | Msa0621210:CDS |
| GGAGTATGGACATCGTATGT+GGG | 0.512226 | 4_2:-73165416 | Msa0621210:CDS |
| TCAAAGAAATTTCGAATCAG+AGG | 0.513360 | 4_2:+73164724 | None:intergenic |
| TTGGGTACTGCACATCAAGC+TGG | 0.514431 | 4_2:-73164079 | Msa0621210:CDS |
| GAAGAGGAGTCTAGAATGGC+TGG | 0.516054 | 4_2:-73163732 | Msa0621210:three_prime_UTR |
| TGTTTGATTCACAAGCTCAC+AGG | 0.516244 | 4_2:-73167067 | Msa0621210:CDS |
| TGCTTAATCACACGGTTCGA+AGG | 0.519149 | 4_2:-73164027 | Msa0621210:CDS |
| CCGATCCCATAATATTCCTA+AGG | 0.521182 | 4_2:-73166936 | Msa0621210:intron |
| AGACGATAAGGGCTTACTCT+TGG | 0.530529 | 4_2:+73165127 | None:intergenic |
| TGTTTGGTTACAGGTCACCT+TGG | 0.532225 | 4_2:-73164137 | Msa0621210:intron |
| TCGGAAAGTACGAAAGAAAT+GGG | 0.534716 | 4_2:+73166955 | None:intergenic |
| TGAGACCCTGCCCGGCACCC+AGG | 0.535609 | 4_2:+73165293 | None:intergenic |
| CACGGTTCGAAGGCCATCCT+CGG | 0.537075 | 4_2:-73164017 | Msa0621210:CDS |
| GGCAGGGTCTCATTGGCTGG+TGG | 0.537460 | 4_2:-73165282 | Msa0621210:CDS |
| AAGAAATGGGTGGAAATGGA+AGG | 0.537983 | 4_2:+73166968 | None:intergenic |
| TGAGAATACATCGACTGTAC+AGG | 0.539915 | 4_2:-73164704 | Msa0621210:intron |
| AAATTAGGGTTGCAGTTGCA+AGG | 0.542607 | 4_2:+73164376 | None:intergenic |
| AATCACTAACATGGGTCCGT+GGG | 0.544047 | 4_2:-73165018 | Msa0621210:CDS |
| GATTGTTGTTGTATGGAAGA+AGG | 0.544230 | 4_2:+73167007 | None:intergenic |
| CCGATCACAGACCGGACTGC+AGG | 0.547715 | 4_2:+73164309 | None:intergenic |
| CTTGGCTGAGAATATTCAGT+TGG | 0.547748 | 4_2:+73165145 | None:intergenic |
| ATGACTGATTGGAAATTCAC+GGG | 0.548486 | 4_2:-73165938 | Msa0621210:CDS |
| CTCCTTTGTCTGATGAGGCG+TGG | 0.550365 | 4_2:-73165907 | Msa0621210:CDS |
| TGAGCTGAGGGTTTAACCAA+AGG | 0.554120 | 4_2:+73167482 | None:intergenic |
| CCTTAGGAATATTATGGGAT+CGG | 0.554125 | 4_2:+73166936 | None:intergenic |
| GTGGCAGGGGAGGGGAGAAG+CGG | 0.554242 | 4_2:+73167427 | None:intergenic |
| GGTGAGCTGCGAGACGATAA+GGG | 0.554481 | 4_2:+73165116 | None:intergenic |
| CACCGGCTGAATCACTAACA+TGG | 0.555370 | 4_2:-73165027 | Msa0621210:CDS |
| GGTGGAGAGATAAAATGTTT+GGG | 0.557457 | 4_2:-73167120 | Msa0621210:exon |
| TTGCCTGTCAGCTTACTCGT+TGG | 0.557599 | 4_2:-73164971 | Msa0621210:CDS |
| AAACAGGTACATATGAGAGA+AGG | 0.559091 | 4_2:+73164104 | None:intergenic |
| TCTCATGCACAGAAGGTGGT+TGG | 0.559566 | 4_2:-73166046 | Msa0621210:CDS |
| GGGTCATCGTGTTTCTAAGA+CGG | 0.562157 | 4_2:-73166122 | Msa0621210:CDS |
| TGGACATACATCCTGCAGTC+CGG | 0.563232 | 4_2:-73164320 | Msa0621210:CDS |
| AGGAGGTTCTCATGCACAGA+AGG | 0.564528 | 4_2:-73166053 | Msa0621210:CDS |
| GTTTGATTCACAAGCTCACA+GGG | 0.567830 | 4_2:-73167066 | Msa0621210:CDS |
| GTTCCCTCCTTTGTCTGATG+AGG | 0.567933 | 4_2:-73165912 | Msa0621210:CDS |
| GAATCACTAACATGGGTCCG+TGG | 0.568732 | 4_2:-73165019 | Msa0621210:CDS |
| TTTACTATGGTCATACTTGG+GGG | 0.574839 | 4_2:-73165992 | Msa0621210:CDS |
| ATCGCTGCCTCAGGTTGTCA+AGG | 0.575597 | 4_2:-73163984 | Msa0621210:CDS |
| GTAAAACAAACATAAGTCCA+AGG | 0.594062 | 4_2:+73165386 | None:intergenic |
| TATGTTACTGCTTAATCACA+CGG | 0.599610 | 4_2:-73164035 | Msa0621210:CDS |
| TAGTTTGCCTTGACAACCTG+AGG | 0.605573 | 4_2:+73163977 | None:intergenic |
| GGCTGGTGGATGGTTAAAAG+TGG | 0.606546 | 4_2:-73165268 | Msa0621210:CDS |
| GCAGTCCGGTCTGTGATCGG+AGG | 0.609023 | 4_2:-73164306 | Msa0621210:CDS |
| CATGTTAGTGATTCAGCCGG+TGG | 0.609054 | 4_2:+73165028 | None:intergenic |
| AACAGGTACATATGAGAGAA+GGG | 0.611039 | 4_2:+73164105 | None:intergenic |
| GATTTGAGAAGTGCCGAGGA+TGG | 0.611196 | 4_2:+73164004 | None:intergenic |
| TTCTAAGACGGTGTCTGCTG+GGG | 0.611493 | 4_2:-73166110 | Msa0621210:CDS |
| AGAAATGGGTGGAAATGGAA+GGG | 0.612420 | 4_2:+73166969 | None:intergenic |
| GATCGGAGGCATCTTTGGCA+TGG | 0.616105 | 4_2:-73164292 | Msa0621210:CDS |
| AGATGCCTCCGATCACAGAC+CGG | 0.616679 | 4_2:+73164301 | None:intergenic |
| ACCCATGTTAGTGATTCAGC+CGG | 0.619631 | 4_2:+73165025 | None:intergenic |
| ACGCCTCATCAGACAAAGGA+GGG | 0.621078 | 4_2:+73165909 | None:intergenic |
| ACTGCAATCTCTTTGAGCTG+AGG | 0.621370 | 4_2:+73167469 | None:intergenic |
| TCTTTACTTTAGCAGCCCCA+CGG | 0.622740 | 4_2:+73165002 | None:intergenic |
| GAGTATGGACATCGTATGTG+GGG | 0.623390 | 4_2:-73165415 | Msa0621210:CDS |
| TGCTGGGGCCATACATAACG+AGG | 0.625400 | 4_2:-73166095 | Msa0621210:CDS |
| AGGTTCTCATGCACAGAAGG+TGG | 0.627630 | 4_2:-73166050 | Msa0621210:CDS |
| AGCAGTCGCCTGAATACAAG+CGG | 0.633913 | 4_2:-73165862 | Msa0621210:intron |
| ACAAGAAGAAAAGAACGAAG+AGG | 0.639298 | 4_2:+73167355 | None:intergenic |
| ACCGGCTGAATCACTAACAT+GGG | 0.639359 | 4_2:-73165026 | Msa0621210:CDS |
| TTGAAACTGCTCGTGACAGG+AGG | 0.640175 | 4_2:-73166070 | Msa0621210:CDS |
| AGACCAACGAGTAAGCTGAC+AGG | 0.646512 | 4_2:+73164968 | None:intergenic |
| TAAAACAAACATAAGTCCAA+GGG | 0.647579 | 4_2:+73165387 | None:intergenic |
| CAGCGATTTGAGAAGTGCCG+AGG | 0.653773 | 4_2:+73164000 | None:intergenic |
| TCAGCATTTGCTATTTACTG+CGG | 0.654834 | 4_2:-73165088 | Msa0621210:CDS |
| CACGCCTCATCAGACAAAGG+AGG | 0.657857 | 4_2:+73165908 | None:intergenic |
| GAGAAGGGTCGTAATTCCCA+AGG | 0.663918 | 4_2:+73164120 | None:intergenic |
| GAAAGGAATTGTGGGCGTAG+CGG | 0.668134 | 4_2:+73167036 | None:intergenic |
| CTGGGGCCATACATAACGAG+GGG | 0.678781 | 4_2:-73166093 | Msa0621210:CDS |
| ATCACTAACATGGGTCCGTG+GGG | 0.679851 | 4_2:-73165017 | Msa0621210:CDS |
| GAAAGTACGAAAGAAATGGG+TGG | 0.680151 | 4_2:+73166958 | None:intergenic |
| GCTGGGGCCATACATAACGA+GGG | 0.687361 | 4_2:-73166094 | Msa0621210:CDS |
| AACCACGCCTCATCAGACAA+AGG | 0.710528 | 4_2:+73165905 | None:intergenic |
| AGTATGGACATCGTATGTGG+GGG | 0.718998 | 4_2:-73165414 | Msa0621210:CDS |
| AAATAGCAAATGCTGATGTG+AGG | 0.721510 | 4_2:+73165095 | None:intergenic |
| TGATTCACAAGCTCACAGGG+AGG | 0.754269 | 4_2:-73167063 | Msa0621210:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGATAATTAATAAGATAAAA+TGG | - | chr4_2:73165369-73165388 | Msa0621210:CDS | 10.0% |
| !!! | TACATTTATTTTTGTAATTA+TGG | - | chr4_2:73166581-73166600 | Msa0621210:intron | 10.0% |
| !!! | AAATTTTCATTCTTTTTATG+TGG | - | chr4_2:73163887-73163906 | Msa0621210:three_prime_UTR | 15.0% |
| !!! | AATTTTCATTCTTTTTATGT+GGG | - | chr4_2:73163888-73163907 | Msa0621210:three_prime_UTR | 15.0% |
| !! | ATGAACATTAAAAACATAAA+GGG | + | chr4_2:73164417-73164436 | None:intergenic | 15.0% |
| !! | TTGATTTATAATTACAATTG+TGG | - | chr4_2:73164515-73164534 | Msa0621210:CDS | 15.0% |
| !! | TGATTTATAATTACAATTGT+GGG | - | chr4_2:73164516-73164535 | Msa0621210:CDS | 15.0% |
| !!! | TTTTAAACAACAAAGATTTA+CGG | - | chr4_2:73164541-73164560 | Msa0621210:intron | 15.0% |
| !! | AGGAAAAAAAAAAGATAAAA+TGG | - | chr4_2:73165401-73165420 | Msa0621210:CDS | 15.0% |
| !!! | ATCAAATTGATTTACATATT+TGG | - | chr4_2:73165434-73165453 | Msa0621210:CDS | 15.0% |
| !! | GTATTTATTATGAAAATCAA+AGG | - | chr4_2:73165594-73165613 | Msa0621210:intron | 15.0% |
| !! | TTATGAAGAAAATATGAATA+CGG | + | chr4_2:73165778-73165797 | None:intergenic | 15.0% |
| !!! | TATTCATATTTTCTTCATAA+AGG | - | chr4_2:73165778-73165797 | Msa0621210:intron | 15.0% |
| !!! | ATTCATATTTTCTTCATAAA+GGG | - | chr4_2:73165779-73165798 | Msa0621210:intron | 15.0% |
| !! | ATTACAAGTACAAATAAAAT+AGG | + | chr4_2:73166266-73166285 | None:intergenic | 15.0% |
| !! | CAAAAAAATTTAAGTAACAA+AGG | + | chr4_2:73166649-73166668 | None:intergenic | 15.0% |
| !!! | AATTTTTTTGAAACTTAAAC+TGG | - | chr4_2:73166659-73166678 | Msa0621210:intron | 15.0% |
| !! | TAACAATATTTAACGATAAA+TGG | + | chr4_2:73166920-73166939 | None:intergenic | 15.0% |
| !! | ATTTATCGTTAAATATTGTT+AGG | - | chr4_2:73166919-73166938 | Msa0621210:intron | 15.0% |
| !! | GAATAATGATTAATATTGTT+GGG | - | chr4_2:73166955-73166974 | Msa0621210:CDS | 15.0% |
| !! | TACAAACGAAATAAAAAATT+CGG | + | chr4_2:73167260-73167279 | None:intergenic | 15.0% |
| !!! | TGTAAAATTATACATTTTCA+AGG | - | chr4_2:73167385-73167404 | Msa0621210:five_prime_UTR | 15.0% |
| !! | AGAATGAAAATTTCAACAAA+GGG | + | chr4_2:73163880-73163899 | None:intergenic | 20.0% |
| !! | AAGAATGAAAATTTCAACAA+AGG | + | chr4_2:73163881-73163900 | None:intergenic | 20.0% |
| !! | GATGAACATTAAAAACATAA+AGG | + | chr4_2:73164418-73164437 | None:intergenic | 20.0% |
| !! | TGAATGTTTAGTATGTATAT+TGG | - | chr4_2:73164954-73164973 | Msa0621210:CDS | 20.0% |
| !! | AGATAAAATGGATAATGTTA+AGG | - | chr4_2:73165381-73165400 | Msa0621210:CDS | 20.0% |
| !!! | AACTTGTTGATTTACATTTT+TGG | - | chr4_2:73165488-73165507 | Msa0621210:intron | 20.0% |
| !!! | AAGAATTCAAGTTCATATAT+TGG | - | chr4_2:73165698-73165717 | Msa0621210:intron | 20.0% |
| !! | TTTATGTTGTTAAATTTCCA+CGG | + | chr4_2:73166702-73166721 | None:intergenic | 20.0% |
| !! | GGAATAATGATTAATATTGT+TGG | - | chr4_2:73166954-73166973 | Msa0621210:CDS | 20.0% |
| ! | GAATGAAAATTTCAACAAAG+GGG | + | chr4_2:73163879-73163898 | None:intergenic | 25.0% |
| ! | AAGTACCTTAGGAATATTAT+GGG | + | chr4_2:73164211-73164230 | None:intergenic | 25.0% |
| !! | AAAGTACCTTAGGAATATTA+TGG | + | chr4_2:73164212-73164231 | None:intergenic | 25.0% |
| !!! | AGAATATAAGAAAGTACCTT+AGG | + | chr4_2:73164222-73164241 | None:intergenic | 25.0% |
| !!! | TTCAATTAGTGGATTTAGAT+GGG | - | chr4_2:73164361-73164380 | Msa0621210:CDS | 25.0% |
| ! | CATTAAAAACATAAAGGGTA+TGG | + | chr4_2:73164412-73164431 | None:intergenic | 25.0% |
| ! | GAATTCCTAGATTACAAAAT+GGG | + | chr4_2:73164677-73164696 | None:intergenic | 25.0% |
| ! | TGAATTCCTAGATTACAAAA+TGG | + | chr4_2:73164678-73164697 | None:intergenic | 25.0% |
| ! | AATTCAAAAACTTGCAATCT+TGG | - | chr4_2:73164692-73164711 | Msa0621210:intron | 25.0% |
| ! | ATTCAAAAACTTGCAATCTT+GGG | - | chr4_2:73164693-73164712 | Msa0621210:intron | 25.0% |
| ! | TAAACATTCACACAAAACAT+TGG | + | chr4_2:73164944-73164963 | None:intergenic | 25.0% |
| !! | ATTCAAGTTCATATATTGGA+TGG | - | chr4_2:73165702-73165721 | Msa0621210:intron | 25.0% |
| ! | TAAAACAAACATAAGTCCAA+GGG | + | chr4_2:73165755-73165774 | None:intergenic | 25.0% |
| ! | TACTTGTAATGATAATTGAG+TGG | - | chr4_2:73166276-73166295 | Msa0621210:intron | 25.0% |
| !! | ATTTAATACTTTTCCGAAGA+TGG | - | chr4_2:73166354-73166373 | Msa0621210:intron | 25.0% |
| !! | TTTAATACTTTTCCGAAGAT+GGG | - | chr4_2:73166355-73166374 | Msa0621210:intron | 25.0% |
| !! | TCATTTCAAGAATGTTTTCA+GGG | + | chr4_2:73166393-73166412 | None:intergenic | 25.0% |
| !! | TTCATTTCAAGAATGTTTTC+AGG | + | chr4_2:73166394-73166413 | None:intergenic | 25.0% |
| !!! | TGGTTGTCCTTTTATTTATT+CGG | - | chr4_2:73166526-73166545 | Msa0621210:intron | 25.0% |
| ! | GTACTTTCCGAATAAATAAA+AGG | + | chr4_2:73166536-73166555 | None:intergenic | 25.0% |
| ! | AGTTGAGACTATTATTATTC+AGG | - | chr4_2:73167194-73167213 | Msa0621210:intron | 25.0% |
| ! | AACGAAATAAAAAATTCGGT+CGG | + | chr4_2:73167256-73167275 | None:intergenic | 25.0% |
| !!! | ATTATACATTTTCAAGGAAG+AGG | - | chr4_2:73167391-73167410 | Msa0621210:five_prime_UTR | 25.0% |
| ! | TTTTCGCAAAACAAAACCTT+TGG | - | chr4_2:73163641-73163660 | Msa0621210:three_prime_UTR | 30.0% |
| TGGGTGGTGATAAATAAAAA+AGG | + | chr4_2:73163851-73163870 | None:intergenic | 30.0% | |
| TTTCAACAAAGGGGTTAAAT+GGG | + | chr4_2:73163870-73163889 | None:intergenic | 30.0% | |
| ATTTCAACAAAGGGGTTAAA+TGG | + | chr4_2:73163871-73163890 | None:intergenic | 30.0% | |
| ! | ACTATTCCAAATTTTGTCAC+TGG | - | chr4_2:73163990-73164009 | Msa0621210:CDS | 30.0% |
| ! | CTTGAATGATTGTTGTTGTA+TGG | + | chr4_2:73164142-73164161 | None:intergenic | 30.0% |
| TTTGGGTAAGTAGTTCAATT+AGG | + | chr4_2:73164311-73164330 | None:intergenic | 30.0% | |
| ! | GACATACATGATCAAGTTTT+GGG | + | chr4_2:73164328-73164347 | None:intergenic | 30.0% |
| ! | TGACATACATGATCAAGTTT+TGG | + | chr4_2:73164329-73164348 | None:intergenic | 30.0% |
| !! | CTTCAATTAGTGGATTTAGA+TGG | - | chr4_2:73164360-73164379 | Msa0621210:CDS | 30.0% |
| ! | AAACATAAAGGGTATGGTAT+TGG | + | chr4_2:73164406-73164425 | None:intergenic | 30.0% |
| TGATTCAATATGAGTCAAGT+AGG | - | chr4_2:73164474-73164493 | Msa0621210:intron | 30.0% | |
| AAACAACAAAGATTTACGGA+TGG | - | chr4_2:73164545-73164564 | Msa0621210:intron | 30.0% | |
| ATTTACGGATGGATATTATC+TGG | - | chr4_2:73164556-73164575 | Msa0621210:intron | 30.0% | |
| TTTCATCTGTGAAATGTCAA+TGG | - | chr4_2:73164878-73164897 | Msa0621210:intron | 30.0% | |
| !! | TGAAATGTCAATGGTGTTAT+GGG | - | chr4_2:73164887-73164906 | Msa0621210:intron | 30.0% |
| TGTTTACTATGGTCATACTT+GGG | - | chr4_2:73165145-73165164 | Msa0621210:CDS | 30.0% | |
| AATGACTGATTGGAAATTCA+CGG | - | chr4_2:73165200-73165219 | Msa0621210:intron | 30.0% | |
| TTTATACAGTTCCAAAAAGC+TGG | + | chr4_2:73165462-73165481 | None:intergenic | 30.0% | |
| ! | ACTTTTTGCAGTGTAAACAA+AGG | - | chr4_2:73165664-73165683 | Msa0621210:intron | 30.0% |
| TTCATATATTGGATGGAGTA+TGG | - | chr4_2:73165709-73165728 | Msa0621210:intron | 30.0% | |
| GTAAAACAAACATAAGTCCA+AGG | + | chr4_2:73165756-73165775 | None:intergenic | 30.0% | |
| GAAACTATGGTATTAGAATC+TGG | + | chr4_2:73165958-73165977 | None:intergenic | 30.0% | |
| TGTAATGATAATTGAGTGGT+TGG | - | chr4_2:73166280-73166299 | Msa0621210:intron | 30.0% | |
| TCAAAGAAATTTCGAATCAG+AGG | + | chr4_2:73166418-73166437 | None:intergenic | 30.0% | |
| ! | TTGTTTCTTGAATTGTGATC+TGG | - | chr4_2:73166506-73166525 | Msa0621210:intron | 30.0% |
| !!! | TTCGGAAAGTACTTTTTTGA+AGG | - | chr4_2:73166544-73166563 | Msa0621210:intron | 30.0% |
| ! | TTTTCTTGTTGACAACCATA+AGG | + | chr4_2:73166798-73166817 | None:intergenic | 30.0% |
| TCATATGTACCTGTTTCATT+GGG | - | chr4_2:73167042-73167061 | Msa0621210:CDS | 30.0% | |
| TATGTTACTGCTTAATCACA+CGG | - | chr4_2:73167104-73167123 | Msa0621210:CDS | 30.0% | |
| TCATATCAATTGCATCATCA+TGG | + | chr4_2:73167301-73167320 | None:intergenic | 30.0% | |
| CTGTCGAATATTATTGATGA+TGG | - | chr4_2:73167455-73167474 | Msa0621210:five_prime_UTR | 30.0% | |
| ACAAGAAGAAAAGAACGAAG+AGG | + | chr4_2:73163787-73163806 | None:intergenic | 35.0% | |
| ! | TCATTCTTTTTATGTGGGCA+TGG | - | chr4_2:73163893-73163912 | Msa0621210:three_prime_UTR | 35.0% |
| TGGTGGAGAGATAAAATGTT+TGG | - | chr4_2:73164018-73164037 | Msa0621210:CDS | 35.0% | |
| GGTGGAGAGATAAAATGTTT+GGG | - | chr4_2:73164019-73164038 | Msa0621210:CDS | 35.0% | |
| !!! | AGCAATTTTAAAACGCAGCA+AGG | - | chr4_2:73164044-73164063 | Msa0621210:CDS | 35.0% |
| ! | GATTGTTGTTGTATGGAAGA+AGG | + | chr4_2:73164135-73164154 | None:intergenic | 35.0% |
| ! | TCGGAAAGTACGAAAGAAAT+GGG | + | chr4_2:73164187-73164206 | None:intergenic | 35.0% |
| ! | ATCGGAAAGTACGAAAGAAA+TGG | + | chr4_2:73164188-73164207 | None:intergenic | 35.0% |
| CCTTAGGAATATTATGGGAT+CGG | + | chr4_2:73164206-73164225 | None:intergenic | 35.0% | |
| GCAATCTACGTGTTATCAAA+TGG | - | chr4_2:73164451-73164470 | Msa0621210:intron | 35.0% | |
| ! | CATGTCCCATTTTGTAATCT+AGG | - | chr4_2:73164669-73164688 | Msa0621210:intron | 35.0% |
| TTGATGTTGGCAAATAACAG+AGG | - | chr4_2:73164718-73164737 | Msa0621210:CDS | 35.0% | |
| ! | GTGAAATGTCAATGGTGTTA+TGG | - | chr4_2:73164886-73164905 | Msa0621210:intron | 35.0% |
| GTGTTTACTATGGTCATACT+TGG | - | chr4_2:73165144-73165163 | Msa0621210:CDS | 35.0% | |
| GTTTACTATGGTCATACTTG+GGG | - | chr4_2:73165146-73165165 | Msa0621210:CDS | 35.0% | |
| TTTACTATGGTCATACTTGG+GGG | - | chr4_2:73165147-73165166 | Msa0621210:CDS | 35.0% | |
| ATGACTGATTGGAAATTCAC+GGG | - | chr4_2:73165201-73165220 | Msa0621210:intron | 35.0% | |
| ! | ACAATCAGATGATTTTGCTC+AGG | + | chr4_2:73165325-73165344 | None:intergenic | 35.0% |
| !! | CATATTTGGAACCAGCTTTT+TGG | - | chr4_2:73165448-73165467 | Msa0621210:CDS | 35.0% |
| !! | CATTTTTGGAAACAGCTTTC+TGG | - | chr4_2:73165502-73165521 | Msa0621210:intron | 35.0% |
| ! | CTAAGAGTTTCTGCTTTGTT+TGG | - | chr4_2:73165823-73165842 | Msa0621210:intron | 35.0% |
| GATGGTTAAAAGTGGTTTAG+AGG | - | chr4_2:73165879-73165898 | Msa0621210:CDS | 35.0% | |
| GTTAAAAGTGGTTTAGAGGT+TGG | - | chr4_2:73165883-73165902 | Msa0621210:CDS | 35.0% | |
| GTATTAGAATCTGGATGAGT+TGG | + | chr4_2:73165949-73165968 | None:intergenic | 35.0% | |
| ! | TACCATAGTTTCTTTTCCTC+AGG | - | chr4_2:73165966-73165985 | Msa0621210:CDS | 35.0% |
| TTCCTGAGGAAAAGAAACTA+TGG | + | chr4_2:73165971-73165990 | None:intergenic | 35.0% | |
| AAATAGCAAATGCTGATGTG+AGG | + | chr4_2:73166047-73166066 | None:intergenic | 35.0% | |
| !! | TCAGCATTTGCTATTTACTG+CGG | - | chr4_2:73166051-73166070 | Msa0621210:CDS | 35.0% |
| ! | TGCTTACATGTTGATTGTCA+GGG | - | chr4_2:73166325-73166344 | Msa0621210:intron | 35.0% |
| GTTGTTAAATTTCCACGGAT+AGG | + | chr4_2:73166697-73166716 | None:intergenic | 35.0% | |
| !!! | TGTTTTAACAGCTCAATCAC+CGG | - | chr4_2:73166738-73166757 | Msa0621210:intron | 35.0% |
| ! | TAAGGCACTCACTGAAATTA+GGG | + | chr4_2:73166780-73166799 | None:intergenic | 35.0% |
| ! | ATAAGGCACTCACTGAAATT+AGG | + | chr4_2:73166781-73166800 | None:intergenic | 35.0% |
| TAATTTCAGTGAGTGCCTTA+TGG | - | chr4_2:73166780-73166799 | Msa0621210:intron | 35.0% | |
| ATGGTTGTCAACAAGAAAAC+TGG | - | chr4_2:73166799-73166818 | Msa0621210:intron | 35.0% | |
| TAATCATTATTCCGCTCAGA+AGG | + | chr4_2:73166947-73166966 | None:intergenic | 35.0% | |
| GATGCTTTACATGATGTACT+TGG | - | chr4_2:73166977-73166996 | Msa0621210:CDS | 35.0% | |
| !! | CATGATGTACTTGGTTTGTT+TGG | - | chr4_2:73166986-73167005 | Msa0621210:CDS | 35.0% |
| !! | TACTTGGTTTGTTTGGTTAC+AGG | - | chr4_2:73166993-73167012 | Msa0621210:CDS | 35.0% |
| AACAGGTACATATGAGAGAA+GGG | + | chr4_2:73167037-73167056 | None:intergenic | 35.0% | |
| AAACAGGTACATATGAGAGA+AGG | + | chr4_2:73167038-73167057 | None:intergenic | 35.0% | |
| CTCATATGTACCTGTTTCAT+TGG | - | chr4_2:73167041-73167060 | Msa0621210:CDS | 35.0% | |
| GAAATAAAAAATTCGGTCGG+TGG | + | chr4_2:73167253-73167272 | None:intergenic | 35.0% | |
| ! | TGCATCATCATGGATTTTCA+CGG | + | chr4_2:73167291-73167310 | None:intergenic | 35.0% |
| ACACTGCCAGTGACAAAATT+TGG | + | chr4_2:73163999-73164018 | None:intergenic | 40.0% | |
| ! | AAATTTTGTCACTGGCAGTG+TGG | - | chr4_2:73163998-73164017 | Msa0621210:CDS | 40.0% |
| TGTTTGATTCACAAGCTCAC+AGG | - | chr4_2:73164072-73164091 | Msa0621210:CDS | 40.0% | |
| GTTTGATTCACAAGCTCACA+GGG | - | chr4_2:73164073-73164092 | Msa0621210:CDS | 40.0% | |
| GGATGAGAGAAAGGAATTGT+GGG | + | chr4_2:73164114-73164133 | None:intergenic | 40.0% | |
| AGGATGAGAGAAAGGAATTG+TGG | + | chr4_2:73164115-73164134 | None:intergenic | 40.0% | |
| ATGGAAGAAGGATGAGAGAA+AGG | + | chr4_2:73164123-73164142 | None:intergenic | 40.0% | |
| AGAAATGGGTGGAAATGGAA+GGG | + | chr4_2:73164173-73164192 | None:intergenic | 40.0% | |
| AAGAAATGGGTGGAAATGGA+AGG | + | chr4_2:73164174-73164193 | None:intergenic | 40.0% | |
| ACGAAAGAAATGGGTGGAAA+TGG | + | chr4_2:73164178-73164197 | None:intergenic | 40.0% | |
| ! | GAAAGTACGAAAGAAATGGG+TGG | + | chr4_2:73164184-73164203 | None:intergenic | 40.0% |
| CCGATCCCATAATATTCCTA+AGG | - | chr4_2:73164203-73164222 | Msa0621210:intron | 40.0% | |
| CAGAGAGATGCTTCAATTAG+TGG | - | chr4_2:73164350-73164369 | Msa0621210:CDS | 40.0% | |
| ! | TAAGTGCTGCTGTTGCAATT+GGG | - | chr4_2:73164612-73164631 | Msa0621210:intron | 40.0% |
| GCAATCTTGGGATTTGATGT+TGG | - | chr4_2:73164705-73164724 | Msa0621210:CDS | 40.0% | |
| ! | GACTTCTGAGAAAACTGTTG+TGG | - | chr4_2:73164986-73165005 | Msa0621210:CDS | 40.0% |
| AAAACTGTTGTGGTGCTCTT+AGG | - | chr4_2:73164996-73165015 | Msa0621210:CDS | 40.0% | |
| AAACTGTTGTGGTGCTCTTA+GGG | - | chr4_2:73164997-73165016 | Msa0621210:CDS | 40.0% | |
| TTTCAACCCCTCGTTATGTA+TGG | + | chr4_2:73165055-73165074 | None:intergenic | 40.0% | |
| AGTCATTGAAAGACCAGATC+TGG | + | chr4_2:73165187-73165206 | None:intergenic | 40.0% | |
| ! | CTGGTCTTTCAATGACTGAT+TGG | - | chr4_2:73165190-73165209 | Msa0621210:intron | 40.0% |
| TCACTTTACCGCTTGTATTC+AGG | + | chr4_2:73165288-73165307 | None:intergenic | 40.0% | |
| !! | ATCTGGATGAGTTGGTCAAT+TGG | + | chr4_2:73165941-73165960 | None:intergenic | 40.0% |
| CTTGGCTGAGAATATTCAGT+TGG | + | chr4_2:73165997-73166016 | None:intergenic | 40.0% | |
| ! | CTATTTACTGCGGTCTCTTT+TGG | - | chr4_2:73166061-73166080 | Msa0621210:CDS | 40.0% |
| ! | TGATAATTGAGTGGTTGGTG+AGG | - | chr4_2:73166285-73166304 | Msa0621210:intron | 40.0% |
| ! | CTGCTTACATGTTGATTGTC+AGG | - | chr4_2:73166324-73166343 | Msa0621210:intron | 40.0% |
| ! | GCTTACATGTTGATTGTCAG+GGG | - | chr4_2:73166326-73166345 | Msa0621210:intron | 40.0% |
| ATCCATGTATCACCCATCTT+CGG | + | chr4_2:73166370-73166389 | None:intergenic | 40.0% | |
| ! | TGAGAATACATCGACTGTAC+AGG | - | chr4_2:73166435-73166454 | Msa0621210:intron | 40.0% |
| ATTTCCACGGATAGGCAAAA+TGG | + | chr4_2:73166689-73166708 | None:intergenic | 40.0% | |
| AAATTAGGGTTGCAGTTGCA+AGG | + | chr4_2:73166766-73166785 | None:intergenic | 40.0% | |
| ATTGTTAGGATCCTTCTGAG+CGG | - | chr4_2:73166933-73166952 | Msa0621210:intron | 40.0% | |
| ! | CTAGAATGGCTGGTTGTTTA+AGG | - | chr4_2:73167417-73167436 | Msa0621210:five_prime_UTR | 40.0% |
| TGAGCTGAGGGTTTAACCAA+AGG | + | chr4_2:73163660-73163679 | None:intergenic | 45.0% | |
| CTGCAATCTCTTTGAGCTGA+GGG | + | chr4_2:73163672-73163691 | None:intergenic | 45.0% | |
| ACTGCAATCTCTTTGAGCTG+AGG | + | chr4_2:73163673-73163692 | None:intergenic | 45.0% | |
| CTGTATCAAAAAGCCAGTGG+CGG | + | chr4_2:73163750-73163769 | None:intergenic | 45.0% | |
| AGCCTGTATCAAAAAGCCAG+TGG | + | chr4_2:73163753-73163772 | None:intergenic | 45.0% | |
| CAACAAAGGGGTTAAATGGG+TGG | + | chr4_2:73163867-73163886 | None:intergenic | 45.0% | |
| ! | GTAAGTGCTGCTGTTGCAAT+TGG | - | chr4_2:73164611-73164630 | Msa0621210:intron | 45.0% |
| ! | GGGTCATCGTGTTTCTAAGA+CGG | - | chr4_2:73165017-73165036 | Msa0621210:CDS | 45.0% |
| !! | TTTCTAAGACGGTGTCTGCT+GGG | - | chr4_2:73165028-73165047 | Msa0621210:CDS | 45.0% |
| CACAGAAGGTGGTTGGAATA+TGG | - | chr4_2:73165100-73165119 | Msa0621210:CDS | 45.0% | |
| GTGGTTGGAATATGGCTCTT+CGG | - | chr4_2:73165108-73165127 | Msa0621210:CDS | 45.0% | |
| TGCTGCATGGGTGTTTACTA+TGG | - | chr4_2:73165134-73165153 | Msa0621210:CDS | 45.0% | |
| TTAACCAGACTCACCAGATC+TGG | - | chr4_2:73165171-73165190 | Msa0621210:intron | 45.0% | |
| !! | AGCTTTCTGGAACTGTGCAA+AGG | - | chr4_2:73165515-73165534 | Msa0621210:intron | 45.0% |
| TGGAGTATGGACATCGTATG+TGG | - | chr4_2:73165722-73165741 | Msa0621210:intron | 45.0% | |
| GGAGTATGGACATCGTATGT+GGG | - | chr4_2:73165723-73165742 | Msa0621210:intron | 45.0% | |
| GAGTATGGACATCGTATGTG+GGG | - | chr4_2:73165724-73165743 | Msa0621210:intron | 45.0% | |
| AGTATGGACATCGTATGTGG+GGG | - | chr4_2:73165725-73165744 | Msa0621210:intron | 45.0% | |
| !! | AGTTTCTGCTTTGTTTGGCC+TGG | - | chr4_2:73165828-73165847 | Msa0621210:intron | 45.0% |
| !! | GTTTCTGCTTTGTTTGGCCT+GGG | - | chr4_2:73165829-73165848 | Msa0621210:intron | 45.0% |
| !! | TATTCAGTTGGTGGTTCCTG+AGG | + | chr4_2:73165985-73166004 | None:intergenic | 45.0% |
| GGCTGAGAATATTCAGTTGG+TGG | + | chr4_2:73165994-73166013 | None:intergenic | 45.0% | |
| AGACGATAAGGGCTTACTCT+TGG | + | chr4_2:73166015-73166034 | None:intergenic | 45.0% | |
| ACCGGCTGAATCACTAACAT+GGG | - | chr4_2:73166113-73166132 | Msa0621210:CDS | 45.0% | |
| ACCCATGTTAGTGATTCAGC+CGG | + | chr4_2:73166117-73166136 | None:intergenic | 45.0% | |
| AATCACTAACATGGGTCCGT+GGG | - | chr4_2:73166121-73166140 | Msa0621210:CDS | 45.0% | |
| TCTTTACTTTAGCAGCCCCA+CGG | + | chr4_2:73166140-73166159 | None:intergenic | 45.0% | |
| TTCCGAAGATGGGTGATACA+TGG | - | chr4_2:73166365-73166384 | Msa0621210:intron | 45.0% | |
| TGTTTGGTTACAGGTCACCT+TGG | - | chr4_2:73167002-73167021 | Msa0621210:CDS | 45.0% | |
| GTTTGGTTACAGGTCACCTT+GGG | - | chr4_2:73167003-73167022 | Msa0621210:CDS | 45.0% | |
| TGTGCAGTACCCAATGAAAC+AGG | + | chr4_2:73167054-73167073 | None:intergenic | 45.0% | |
| TGCTTAATCACACGGTTCGA+AGG | - | chr4_2:73167112-73167131 | Msa0621210:exon | 45.0% | |
| ! | TAGTTTGCCTTGACAACCTG+AGG | + | chr4_2:73167165-73167184 | None:intergenic | 45.0% |
| AAATTCGGTCGGTGGACAAT+TGG | + | chr4_2:73167245-73167264 | None:intergenic | 45.0% | |
| CAAGGAAGAGGAGTCTAGAA+TGG | - | chr4_2:73167403-73167422 | Msa0621210:five_prime_UTR | 45.0% | |
| TATCAAAAAGCCAGTGGCGG+TGG | + | chr4_2:73163747-73163766 | None:intergenic | 50.0% | |
| !!! | CGCCACTGGCTTTTTGATAC+AGG | - | chr4_2:73163748-73163767 | Msa0621210:three_prime_UTR | 50.0% |
| ! | TTTTGTCACTGGCAGTGTGG+TGG | - | chr4_2:73164001-73164020 | Msa0621210:CDS | 50.0% |
| TGATTCACAAGCTCACAGGG+AGG | - | chr4_2:73164076-73164095 | Msa0621210:CDS | 50.0% | |
| GAAAGGAATTGTGGGCGTAG+CGG | + | chr4_2:73164106-73164125 | None:intergenic | 50.0% | |
| !! | GTTTCTAAGACGGTGTCTGC+TGG | - | chr4_2:73165027-73165046 | Msa0621210:CDS | 50.0% |
| !! | TTCTAAGACGGTGTCTGCTG+GGG | - | chr4_2:73165029-73165048 | Msa0621210:CDS | 50.0% |
| TTGAAACTGCTCGTGACAGG+AGG | - | chr4_2:73165069-73165088 | Msa0621210:CDS | 50.0% | |
| AGGAGGTTCTCATGCACAGA+AGG | - | chr4_2:73165086-73165105 | Msa0621210:CDS | 50.0% | |
| AGGTTCTCATGCACAGAAGG+TGG | - | chr4_2:73165089-73165108 | Msa0621210:CDS | 50.0% | |
| TCTCATGCACAGAAGGTGGT+TGG | - | chr4_2:73165093-73165112 | Msa0621210:CDS | 50.0% | |
| AAGACCAGATCTGGTGAGTC+TGG | + | chr4_2:73165178-73165197 | None:intergenic | 50.0% | |
| GTTCCCTCCTTTGTCTGATG+AGG | - | chr4_2:73165227-73165246 | Msa0621210:intron | 50.0% | |
| ACGCCTCATCAGACAAAGGA+GGG | + | chr4_2:73165233-73165252 | None:intergenic | 50.0% | |
| AACCACGCCTCATCAGACAA+AGG | + | chr4_2:73165237-73165256 | None:intergenic | 50.0% | |
| AGCAGTCGCCTGAATACAAG+CGG | - | chr4_2:73165277-73165296 | Msa0621210:CDS | 50.0% | |
| ! | GGCTGGTGGATGGTTAAAAG+TGG | - | chr4_2:73165871-73165890 | Msa0621210:CDS | 50.0% |
| TGTTGTTATGCCTGAGCCAC+CGG | - | chr4_2:73166095-73166114 | Msa0621210:CDS | 50.0% | |
| CATGTTAGTGATTCAGCCGG+TGG | + | chr4_2:73166114-73166133 | None:intergenic | 50.0% | |
| ! | CACCGGCTGAATCACTAACA+TGG | - | chr4_2:73166112-73166131 | Msa0621210:CDS | 50.0% |
| GAATCACTAACATGGGTCCG+TGG | - | chr4_2:73166120-73166139 | Msa0621210:CDS | 50.0% | |
| ATCACTAACATGGGTCCGTG+GGG | - | chr4_2:73166122-73166141 | Msa0621210:CDS | 50.0% | |
| TTGCCTGTCAGCTTACTCGT+TGG | - | chr4_2:73166168-73166187 | Msa0621210:intron | 50.0% | |
| AGACCAACGAGTAAGCTGAC+AGG | + | chr4_2:73166174-73166193 | None:intergenic | 50.0% | |
| !! | GTTGGTCTTACTGCTGTCTC+TGG | - | chr4_2:73166186-73166205 | Msa0621210:intron | 50.0% |
| ! | GTCTCTGGTGCATTTGTTGC+AGG | - | chr4_2:73166201-73166220 | Msa0621210:intron | 50.0% |
| TCCACGGATAGGCAAAATGG+CGG | + | chr4_2:73166686-73166705 | None:intergenic | 50.0% | |
| TGGACATACATCCTGCAGTC+CGG | - | chr4_2:73166819-73166838 | Msa0621210:intron | 50.0% | |
| !! | TCTGTGATCGGAGGCATCTT+TGG | - | chr4_2:73166842-73166861 | Msa0621210:intron | 50.0% |
| CTTTGGCATGGCATCTGTTC+AGG | - | chr4_2:73166859-73166878 | Msa0621210:intron | 50.0% | |
| GAGAAGGGTCGTAATTCCCA+AGG | + | chr4_2:73167022-73167041 | None:intergenic | 50.0% | |
| ! | TTGGGTACTGCACATCAAGC+TGG | - | chr4_2:73167060-73167079 | Msa0621210:CDS | 50.0% |
| !! | GATTTGAGAAGTGCCGAGGA+TGG | + | chr4_2:73167138-73167157 | None:intergenic | 50.0% |
| ACTTCTCAAATCGCTGCCTC+AGG | - | chr4_2:73167146-73167165 | Msa0621210:intron | 50.0% | |
| ! | GAAGAGGAGTCTAGAATGGC+TGG | - | chr4_2:73167407-73167426 | Msa0621210:five_prime_UTR | 50.0% |
| TGCTGGGGCCATACATAACG+AGG | - | chr4_2:73165044-73165063 | Msa0621210:CDS | 55.0% | |
| GCTGGGGCCATACATAACGA+GGG | - | chr4_2:73165045-73165064 | Msa0621210:CDS | 55.0% | |
| CTGGGGCCATACATAACGAG+GGG | - | chr4_2:73165046-73165065 | Msa0621210:CDS | 55.0% | |
| GGGTTGAAACTGCTCGTGAC+AGG | - | chr4_2:73165066-73165085 | Msa0621210:CDS | 55.0% | |
| CACGCCTCATCAGACAAAGG+AGG | + | chr4_2:73165234-73165253 | None:intergenic | 55.0% | |
| CTCCTTTGTCTGATGAGGCG+TGG | - | chr4_2:73165232-73165251 | Msa0621210:intron | 55.0% | |
| ATGGACATCGTATGTGGGGG+AGG | - | chr4_2:73165728-73165747 | Msa0621210:intron | 55.0% | |
| TGGACATCGTATGTGGGGGA+GGG | - | chr4_2:73165729-73165748 | Msa0621210:intron | 55.0% | |
| GGTGAGCTGCGAGACGATAA+GGG | + | chr4_2:73166026-73166045 | None:intergenic | 55.0% | |
| AGGTGAGCTGCGAGACGATA+AGG | + | chr4_2:73166027-73166046 | None:intergenic | 55.0% | |
| !! | ACCGCCATTTTGCCTATCCG+TGG | - | chr4_2:73166682-73166701 | Msa0621210:intron | 55.0% |
| GGGTTGCAGTTGCAAGGATC+CGG | + | chr4_2:73166760-73166779 | None:intergenic | 55.0% | |
| AGATGCCTCCGATCACAGAC+CGG | + | chr4_2:73166841-73166860 | None:intergenic | 55.0% | |
| !! | GATCGGAGGCATCTTTGGCA+TGG | - | chr4_2:73166847-73166866 | Msa0621210:intron | 55.0% |
| !! | CAGCGATTTGAGAAGTGCCG+AGG | + | chr4_2:73167142-73167161 | None:intergenic | 55.0% |
| ! | ATCGCTGCCTCAGGTTGTCA+AGG | - | chr4_2:73167155-73167174 | Msa0621210:intron | 55.0% |
| CAAAAAGCCAGTGGCGGTGG+CGG | + | chr4_2:73163744-73163763 | None:intergenic | 60.0% | |
| GCTCTTCGGCTCTGCTGCAT+GGG | - | chr4_2:73165122-73165141 | Msa0621210:CDS | 60.0% | |
| !! | GCTTTGTTTGGCCTGGGTGC+CGG | - | chr4_2:73165835-73165854 | Msa0621210:intron | 60.0% |
| ! | CTTTGTTTGGCCTGGGTGCC+GGG | - | chr4_2:73165836-73165855 | Msa0621210:intron | 60.0% |
| ! | GGGTCTCATTGGCTGGTGGA+TGG | - | chr4_2:73165861-73165880 | Msa0621210:intron | 60.0% |
| AGTGATTCAGCCGGTGGCTC+AGG | + | chr4_2:73166108-73166127 | None:intergenic | 60.0% | |
| CCTGCAGTCCGGTCTGTGAT+CGG | - | chr4_2:73166830-73166849 | Msa0621210:intron | 60.0% | |
| CACGGTTCGAAGGCCATCCT+CGG | - | chr4_2:73167122-73167141 | Msa0621210:exon | 60.0% | |
| GGCTCTTCGGCTCTGCTGCA+TGG | - | chr4_2:73165121-73165140 | Msa0621210:CDS | 65.0% | |
| CCAGCCAATGAGACCCTGCC+CGG | + | chr4_2:73165857-73165876 | None:intergenic | 65.0% | |
| ! | GGCAGGGTCTCATTGGCTGG+TGG | - | chr4_2:73165857-73165876 | Msa0621210:intron | 65.0% |
| CCGATCACAGACCGGACTGC+AGG | + | chr4_2:73166833-73166852 | None:intergenic | 65.0% | |
| GCAGTCCGGTCTGTGATCGG+AGG | - | chr4_2:73166833-73166852 | Msa0621210:intron | 65.0% | |
| GTGGCAGGGGAGGGGAGAAG+CGG | + | chr4_2:73163715-73163734 | None:intergenic | 70.0% | |
| ! | AAAGCCAGTGGCGGTGGCGG+CGG | + | chr4_2:73163741-73163760 | None:intergenic | 70.0% |
| CGTATGTGGGGGAGGGCCCT+TGG | - | chr4_2:73165736-73165755 | Msa0621210:intron | 70.0% | |
| !! | TTTGGCCTGGGTGCCGGGCA+GGG | - | chr4_2:73165841-73165860 | Msa0621210:intron | 70.0% |
| ! | GGTGCCGGGCAGGGTCTCAT+TGG | - | chr4_2:73165850-73165869 | Msa0621210:intron | 70.0% |
| CCGGGCAGGGTCTCATTGGC+TGG | - | chr4_2:73165854-73165873 | Msa0621210:intron | 70.0% | |
| !! | GTTTGGCCTGGGTGCCGGGC+AGG | - | chr4_2:73165840-73165859 | Msa0621210:intron | 75.0% |
| TGAGACCCTGCCCGGCACCC+AGG | + | chr4_2:73165849-73165868 | None:intergenic | 75.0% | |
| ! | GGCGGCGCGTGGCAGGGGAG+GGG | + | chr4_2:73163723-73163742 | None:intergenic | 85.0% |
| ! | CGGCGGCGCGTGGCAGGGGA+GGG | + | chr4_2:73163724-73163743 | None:intergenic | 85.0% |
| ! | GTGGCGGCGGCGCGTGGCAG+GGG | + | chr4_2:73163728-73163747 | None:intergenic | 85.0% |
| !! | GGTGGCGGCGGCGCGTGGCA+GGG | + | chr4_2:73163729-73163748 | None:intergenic | 85.0% |
| ! | GCGGCGGCGCGTGGCAGGGG+AGG | + | chr4_2:73163725-73163744 | None:intergenic | 90.0% |
| !! | CGGTGGCGGCGGCGCGTGGC+AGG | + | chr4_2:73163730-73163749 | None:intergenic | 90.0% |
| !! | GTGGCGGTGGCGGCGGCGCG+TGG | + | chr4_2:73163734-73163753 | None:intergenic | 90.0% |
| ! | CGCGCCGCCGCCACCGCCAC+TGG | - | chr4_2:73163734-73163753 | Msa0621210:three_prime_UTR | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 73163633 | 73167528 | 73163633 | ID=Msa0621210;Name=Msa0621210 |
| chr4_2 | mRNA | 73163633 | 73167528 | 73163633 | ID=Msa0621210-mRNA-1;Parent=Msa0621210;Name=Msa0621210-mRNA-1;_AED=0.11;_eAED=0.11;_QI=209|0.75|0.88|1|1|1|9|343|465 |
| chr4_2 | exon | 73163633 | 73164146 | 73163633 | ID=Msa0621210-mRNA-1:exon:21937;Parent=Msa0621210-mRNA-1 |
| chr4_2 | exon | 73164281 | 73164412 | 73164281 | ID=Msa0621210-mRNA-1:exon:21936;Parent=Msa0621210-mRNA-1 |
| chr4_2 | exon | 73164511 | 73164549 | 73164511 | ID=Msa0621210-mRNA-1:exon:21935;Parent=Msa0621210-mRNA-1 |
| chr4_2 | exon | 73164705 | 73164815 | 73164705 | ID=Msa0621210-mRNA-1:exon:21934;Parent=Msa0621210-mRNA-1 |
| chr4_2 | exon | 73164928 | 73165173 | 73164928 | ID=Msa0621210-mRNA-1:exon:21933;Parent=Msa0621210-mRNA-1 |
| chr4_2 | exon | 73165261 | 73165486 | 73165261 | ID=Msa0621210-mRNA-1:exon:21932;Parent=Msa0621210-mRNA-1 |
| chr4_2 | exon | 73165863 | 73166143 | 73165863 | ID=Msa0621210-mRNA-1:exon:21931;Parent=Msa0621210-mRNA-1 |
| chr4_2 | exon | 73166937 | 73167145 | 73166937 | ID=Msa0621210-mRNA-1:exon:21930;Parent=Msa0621210-mRNA-1 |
| chr4_2 | exon | 73167337 | 73167528 | 73167337 | ID=Msa0621210-mRNA-1:exon:21929;Parent=Msa0621210-mRNA-1 |
| chr4_2 | five_prime_UTR | 73167337 | 73167528 | 73167337 | ID=Msa0621210-mRNA-1:five_prime_utr;Parent=Msa0621210-mRNA-1 |
| chr4_2 | five_prime_UTR | 73167129 | 73167145 | 73167129 | ID=Msa0621210-mRNA-1:five_prime_utr;Parent=Msa0621210-mRNA-1 |
| chr4_2 | CDS | 73166937 | 73167128 | 73166937 | ID=Msa0621210-mRNA-1:cds;Parent=Msa0621210-mRNA-1 |
| chr4_2 | CDS | 73165863 | 73166143 | 73165863 | ID=Msa0621210-mRNA-1:cds;Parent=Msa0621210-mRNA-1 |
| chr4_2 | CDS | 73165261 | 73165486 | 73165261 | ID=Msa0621210-mRNA-1:cds;Parent=Msa0621210-mRNA-1 |
| chr4_2 | CDS | 73164928 | 73165173 | 73164928 | ID=Msa0621210-mRNA-1:cds;Parent=Msa0621210-mRNA-1 |
| chr4_2 | CDS | 73164705 | 73164815 | 73164705 | ID=Msa0621210-mRNA-1:cds;Parent=Msa0621210-mRNA-1 |
| chr4_2 | CDS | 73164511 | 73164549 | 73164511 | ID=Msa0621210-mRNA-1:cds;Parent=Msa0621210-mRNA-1 |
| chr4_2 | CDS | 73164281 | 73164412 | 73164281 | ID=Msa0621210-mRNA-1:cds;Parent=Msa0621210-mRNA-1 |
| chr4_2 | CDS | 73163976 | 73164146 | 73163976 | ID=Msa0621210-mRNA-1:cds;Parent=Msa0621210-mRNA-1 |
| chr4_2 | three_prime_UTR | 73163633 | 73163975 | 73163633 | ID=Msa0621210-mRNA-1:three_prime_utr;Parent=Msa0621210-mRNA-1 |
| Gene Sequence |
| Protein sequence |
