AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0840940

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0840940 MtrunA17_Chr5g0410171 69.315 730 156 6 2 665 6 733 0.0 1004
Msa0840940 MtrunA17_Chr5g0410271 99.083 327 3 0 341 667 2 328 0.0 661
Msa0840940 MtrunA17_Chr5g0410201 93.617 329 21 0 339 667 1 329 0.0 631
Msa0840940 MtrunA17_Chr5g0410341 84.071 339 54 0 328 666 408 746 0.0 598
Msa0840940 MtrunA17_Chr5g0410341 69.162 334 91 5 3 326 5 336 2.26e-156 469
Msa0840940 MtrunA17_Chr6g0457101 44.744 704 327 12 2 664 4 686 0.0 556
Msa0840940 MtrunA17_Chr6g0456101 43.185 741 328 14 2 659 4 734 1.46e-179 529
Msa0840940 MtrunA17_Chr5g0410461 58.808 369 142 4 303 663 96 462 6.01e-137 409
Msa0840940 MtrunA17_Chr6g0456141 57.184 348 145 3 318 664 38 382 5.28e-135 402
Msa0840940 MtrunA17_Chr5g0410291 93.909 197 8 1 134 330 1 193 1.67e-128 378
Msa0840940 MtrunA17_Chr5g0410371 66.554 296 93 2 372 663 1 294 2.73e-126 376
Msa0840940 MtrunA17_Chr5g0410211 81.818 198 35 1 134 330 1 198 5.34e-111 333
Msa0840940 MtrunA17_Chr5g0410191 82.292 192 34 0 475 666 2 193 4.27e-105 317
Msa0840940 MtrunA17_Chr5g0410581 48.870 354 170 4 320 664 444 795 1.57e-99 322
Msa0840940 MtrunA17_Chr5g0410581 37.270 381 168 15 5 328 8 374 5.90e-46 175
Msa0840940 MtrunA17_Chr2g0297701 34.712 556 327 14 117 666 47 572 2.45e-90 292
Msa0840940 MtrunA17_Chr5g0443001 34.680 594 322 13 114 663 30 601 1.24e-86 283
Msa0840940 MtrunA17_Chr5g0410181 84.444 135 21 0 533 667 1 135 7.83e-74 234
Msa0840940 MtrunA17_Chr3g0100741 31.699 571 329 14 114 646 32 579 1.15e-73 248
Msa0840940 MtrunA17_Chr2g0297681 29.811 634 389 14 61 662 79 688 4.51e-69 239
Msa0840940 MtrunA17_Chr2g0297691 30.530 642 377 18 61 663 80 691 1.38e-68 237
Msa0840940 MtrunA17_Chr2g0297651 28.267 704 417 19 15 663 20 690 4.02e-67 233
Msa0840940 MtrunA17_Chr3g0096941 30.465 581 346 13 114 655 32 593 2.00e-66 229
Msa0840940 MtrunA17_Chr5g0410251 87.037 108 14 0 1 108 1 108 2.80e-63 205
Msa0840940 MtrunA17_Chr2g0297481 31.827 509 296 13 173 667 4 475 4.33e-61 212
Msa0840940 MtrunA17_Chr2g0297491 37.941 340 188 5 325 663 60 377 9.80e-61 208
Msa0840940 MtrunA17_Chr5g0410541 51.905 210 90 5 460 664 13 216 1.10e-60 202
Msa0840940 MtrunA17_Chr5g0410451 49.500 200 96 1 470 664 36 235 1.39e-59 200
Msa0840940 MtrunA17_Chr6g0456151 41.379 290 145 7 2 273 4 286 9.25e-57 194
Msa0840940 MtrunA17_Chr3g0100301 47.959 196 95 1 464 659 209 397 8.73e-55 192
Msa0840940 MtrunA17_Chr2g0297711 36.082 291 182 3 375 663 238 526 2.53e-51 186
Msa0840940 MtrunA17_Chr5g0410411 39.062 320 137 10 3 278 5 310 5.54e-51 180
Msa0840940 MtrunA17_Chr5g0410381 43.852 244 109 4 109 330 6 243 2.43e-50 175
Msa0840940 MtrunA17_Chr5g0410471 45.662 219 107 5 31 247 104 312 3.23e-43 158
Msa0840940 MtrunA17_Chr2g0286601 35.836 293 177 4 354 645 371 653 1.49e-42 164
Msa0840940 MtrunA17_Chr3g0098481 32.803 314 198 5 359 663 22 331 2.54e-42 156
Msa0840940 MtrunA17_Chr5g0410511 42.051 195 108 1 475 664 2 196 8.29e-41 147
Msa0840940 MtrunA17_Chr3g0102001 32.353 306 186 4 371 664 440 736 3.78e-37 148
Msa0840940 MtrunA17_Chr3g0102001 28.636 220 133 6 126 331 30 239 1.63e-13 73.9
Msa0840940 MtrunA17_Chr2g0286551 33.117 308 200 5 354 659 351 654 1.26e-36 146
Msa0840940 MtrunA17_Chr2g0284501 24.567 635 389 17 100 659 31 650 1.81e-35 142
Msa0840940 MtrunA17_Chr3g0098301 29.341 334 215 6 344 659 63 393 1.90e-35 138
Msa0840940 MtrunA17_Chr5g0410501 50.000 144 69 2 332 474 147 288 9.32e-33 128
Msa0840940 MtrunA17_Chr5g0410561 40.724 221 114 6 60 273 3 213 1.09e-32 125
Msa0840940 MtrunA17_Chr1g0211541 27.984 511 302 20 126 617 7 470 2.04e-32 132
Msa0840940 MtrunA17_Chr2g0286561 37.791 172 100 1 474 645 14 178 1.47e-31 122
Msa0840940 MtrunA17_Chr5g0439061 32.534 292 191 4 372 659 437 726 3.01e-29 124
Msa0840940 MtrunA17_Chr2g0284541 32.237 304 194 5 356 657 337 630 7.84e-29 122
Msa0840940 MtrunA17_Chr3g0098531 31.064 235 157 3 431 661 48 281 5.00e-28 114
Msa0840940 MtrunA17_Chr1g0211531 25.676 444 276 12 148 584 54 450 1.76e-26 114
Msa0840940 MtrunA17_Chr5g0410551 52.336 107 48 2 372 477 1 105 1.11e-25 102
Msa0840940 MtrunA17_Chr5g0439081 35.519 183 115 2 475 656 16 196 5.74e-25 103
Msa0840940 MtrunA17_Chr5g0410441 55.556 90 37 2 387 475 1 88 1.02e-22 93.6
Msa0840940 MtrunA17_Chr3g0100921 42.276 123 70 1 524 645 2 124 3.27e-21 90.5
Msa0840940 MtrunA17_Chr5g0439051 33.333 189 124 2 475 662 20 207 4.87e-19 86.7
Msa0840940 MtrunA17_Chr1g0211511 28.889 225 150 5 363 584 8 225 6.50e-19 88.6
Msa0840940 MtrunA17_Chr3g0100931 28.155 206 131 6 275 475 13 206 3.98e-17 80.5
Msa0840940 MtrunA17_Chr2g0297521 43.529 85 47 1 467 551 1 84 9.01e-15 70.1
Msa0840940 MtrunA17_Chr2g0297611 39.759 83 49 1 489 571 9 90 7.15e-13 64.7
Msa0840940 MtrunA17_Chr3g0098541 28.141 199 121 5 145 331 4 192 2.06e-12 69.3
Msa0840940 MtrunA17_Chr6g0455841 27.230 213 124 8 387 597 2 185 1.37e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0840940 AT3G18670.1 37.696 573 316 14 103 663 40 583 3.05e-123 379
Msa0840940 AT3G18670.2 35.761 618 321 14 103 663 40 638 3.95e-122 378
Msa0840940 AT5G04700.1 35.091 550 301 10 155 663 121 655 1.46e-88 290
Msa0840940 AT5G04690.2 32.770 592 343 9 110 663 71 645 1.06e-86 285
Msa0840940 AT5G04690.1 33.989 559 346 10 110 663 71 611 1.30e-85 281
Msa0840940 AT5G04690.3 32.378 593 330 11 110 663 71 631 8.04e-83 275
Msa0840940 AT5G04730.1 31.868 546 313 11 162 663 58 588 1.90e-75 254
Msa0840940 AT5G04680.4 32.437 558 313 11 155 663 108 650 6.82e-75 254
Msa0840940 AT5G04680.2 32.463 536 300 10 175 663 7 527 1.04e-73 247
Msa0840940 AT5G04680.3 31.843 559 301 13 155 663 108 636 4.44e-70 240
Msa0840940 AT5G04680.1 30.375 586 317 14 155 663 108 679 1.55e-65 229
Msa0840940 AT5G35810.1 38.487 304 176 5 372 667 35 335 1.02e-62 212
Msa0840940 AT3G54065.1 45.349 172 88 1 461 626 8 179 7.62e-44 157
Msa0840940 AT5G04700.2 28.691 359 204 7 155 475 121 465 9.22e-33 132
Msa0840940 AT4G03500.2 26.394 269 166 10 375 622 298 555 1.25e-11 68.2
Msa0840940 AT4G03500.3 26.394 269 166 10 375 622 298 555 1.25e-11 68.2
Msa0840940 AT4G03500.1 26.493 268 165 10 375 621 321 577 1.39e-11 68.2

Find 115 sgRNAs with CRISPR-Local

Find 747 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCATCTTGCTGGAAATTT+AGG 0.133156 5_4:-16818558 Msa0840940:CDS
TGTGACTTCTGTTTCTAAAA+TGG 0.173100 5_4:-16830096 Msa0840940:CDS
TTCACTTGCTATGCTCTTAA+AGG 0.220345 5_4:-16817092 Msa0840940:CDS
CATGCGTGCTAATGCGTATA+AGG 0.243223 5_4:+16826374 None:intergenic
TGCATCTTGCTGGAAATTTA+GGG 0.267806 5_4:-16818557 Msa0840940:CDS
TTCCCAAGTGGCAACAAATA+TGG 0.279529 5_4:-16826342 Msa0840940:CDS
ATAAAATCTCTCTTTGCATT+TGG 0.294983 5_4:+16818496 None:intergenic
ATACATGATGCAAGTGTAAA+TGG 0.302746 5_4:-16818630 Msa0840940:CDS
CAAAAGACAATTACGATAAC+TGG 0.309271 5_4:-16830166 Msa0840940:CDS
GGTTTATTGAGAGCGATAAT+TGG 0.314384 5_4:-16827024 Msa0840940:CDS
TCTTGTTCCTAAAACTCATT+TGG 0.331573 5_4:-16826657 Msa0840940:CDS
AAGCTAACCCTGACCTCTTA+TGG 0.342835 5_4:-16818725 Msa0840940:CDS
AACACCCTCTTGCATCTTGC+TGG 0.352306 5_4:-16818567 Msa0840940:CDS
CGAAGAAATTGTGAAGAAAT+TGG 0.359125 5_4:-16826903 Msa0840940:CDS
TGTTGGTCTTCATAGATAAT+AGG 0.360275 5_4:+16826738 None:intergenic
AATAATCAGTAAGTTTCATT+TGG 0.363967 5_4:+16816958 None:intergenic
GAAGGTACTAGAACAATAAC+TGG 0.372543 5_4:+16817025 None:intergenic
ACTTCAATCCTACTCTTCAT+TGG 0.375650 5_4:-16817232 Msa0840940:CDS
GTGACTTCTGTTTCTAAAAT+GGG 0.379846 5_4:-16830095 Msa0840940:CDS
CTTCATGTTGCAGCGATTGC+TGG 0.380658 5_4:-16826929 Msa0840940:CDS
TACCATACACTTTGCCACTT+TGG 0.391675 5_4:+16826793 None:intergenic
AACAGGAATTTCACCATTGT+TGG 0.392769 5_4:+16826721 None:intergenic
ACTTAAGCGGCAAAGACATT+AGG 0.393015 5_4:+16817176 None:intergenic
ATGCAAAATTATTCATGAAA+AGG 0.393604 5_4:-16826997 Msa0840940:CDS
TGTTCTTCTTGCTGCAGCTA+AGG 0.399795 5_4:-16826702 Msa0840940:CDS
CATAGCAAGTGAAGCACAAA+AGG 0.400124 5_4:+16817102 None:intergenic
TCAATAGACCATAAGAGGTC+AGG 0.402981 5_4:+16818717 None:intergenic
TTTGATCTTCACCGTAGATC+TGG 0.405236 5_4:-16818528 Msa0840940:CDS
GCTGCAGCTTTCACTGTCCC+TGG 0.408383 5_4:-16817352 Msa0840940:CDS
TCACTTGCTATGCTCTTAAA+GGG 0.427681 5_4:-16817091 Msa0840940:CDS
TTTCTCTGTGGTGTCCATGA+TGG 0.430022 5_4:-16817128 Msa0840940:CDS
AGACTCTGATTCTGATTTGT+GGG 0.431265 5_4:+16826416 None:intergenic
GCTCTTGTTGCTGAGTTGAC+TGG 0.432007 5_4:-16826821 Msa0840940:CDS
TGCAAAATTATTCATGAAAA+GGG 0.432987 5_4:-16826996 Msa0840940:CDS
CTGTCTTGATTGTTTCCACC+AGG 0.436340 5_4:+16817334 None:intergenic
CAGACTCTGATTCTGATTTG+TGG 0.439156 5_4:+16826415 None:intergenic
AAAGTGTATGGTAGAAAAGA+AGG 0.444573 5_4:-16826783 Msa0840940:CDS
TTACGATAACTGGAGCTGTT+TGG 0.445134 5_4:-16830156 Msa0840940:CDS
TTCTGTTTCTAAAATGGGCG+TGG 0.451408 5_4:-16830090 Msa0840940:CDS
GAAGAGTAGGATTGAAGTTG+AGG 0.458968 5_4:+16817237 None:intergenic
TGCATACTGCTAAAGATGCT+TGG 0.459549 5_4:-16829965 Msa0840940:CDS
GTTCTTCTTGCTGCAGCTAA+GGG 0.462009 5_4:-16826701 Msa0840940:CDS
TTAGCTGCAGCAAGAAGAAC+AGG 0.465319 5_4:+16826704 None:intergenic
AATCCATATTTGTTGCCACT+TGG 0.469531 5_4:+16826339 None:intergenic
CACTTGCATCATGTATGAGT+TGG 0.475670 5_4:+16818637 None:intergenic
TCAACTCAGCAACAAGAGCT+AGG 0.480624 5_4:+16826825 None:intergenic
AACGGCACGTTATGCAGAAA+AGG 0.483440 5_4:-16817203 Msa0840940:CDS
GTGAAGAAATTGGTGAAGGA+AGG 0.488215 5_4:-16826893 Msa0840940:CDS
CACCAAAGTGGCAAAGTGTA+TGG 0.489511 5_4:-16826795 Msa0840940:CDS
ATCCATATTTGTTGCCACTT+GGG 0.493011 5_4:+16826340 None:intergenic
AATCGTGCACCCCAAGTGTA+AGG 0.493640 5_4:-16817518 Msa0840940:CDS
GATTCTGATTTGTGGGTAAG+TGG 0.497393 5_4:+16826423 None:intergenic
TCTTGAGGGGCATGATCTGT+GGG 0.501247 5_4:-16830123 Msa0840940:CDS
TATCGCTCTCAATAAACCTA+TGG 0.503656 5_4:+16827029 None:intergenic
CACAAGGAGCTAGTGAAAGC+AGG 0.504446 5_4:-16817445 Msa0840940:CDS
TCTCTTTGCATTTGGAGCGC+AGG 0.507168 5_4:+16818504 None:intergenic
ATGCGTGCTAATGCGTATAA+GGG 0.511739 5_4:+16826375 None:intergenic
TTGGTGAGAAACTATCTTGA+GGG 0.511790 5_4:-16830137 Msa0840940:CDS
ATGGAACAAGGTTAATGCTA+AGG 0.520531 5_4:-16830045 Msa0840940:CDS
ATCTTGAGGGGCATGATCTG+TGG 0.525929 5_4:-16830124 Msa0840940:CDS
ATGTTAAAAGCAGCTAAGCA+TGG 0.526931 5_4:-16818777 Msa0840940:CDS
TCTGTTTCTAAAATGGGCGT+GGG 0.542350 5_4:-16830089 Msa0840940:CDS
TTGCCACTTGGGAACACAGA+AGG 0.546189 5_4:+16826351 None:intergenic
CTGCTTTCACTAGCTCCTTG+TGG 0.546917 5_4:+16817446 None:intergenic
TATGGAGTGGTCTATAGTGA+TGG 0.553824 5_4:+16827047 None:intergenic
TGTTAAAAGCAGCTAAGCAT+GGG 0.560207 5_4:-16818776 Msa0840940:CDS
AAATGGGCAAAAGATACAGC+TGG 0.563052 5_4:-16817418 Msa0840940:CDS
CAATAGACCATAAGAGGTCA+GGG 0.564786 5_4:+16818718 None:intergenic
TTAGAATTCCAATGAAGAGT+AGG 0.566020 5_4:+16817224 None:intergenic
AGCACAAAAGGAAACCATCA+TGG 0.568257 5_4:+16817114 None:intergenic
TAAGGAATCTGAACTGAGAG+AGG 0.568722 5_4:-16818817 Msa0840940:CDS
TGGTTCAAGAACTATTGCAT+TGG 0.569941 5_4:+16830193 None:intergenic
TGAAGAAATTGGTGAAGGAA+GGG 0.574748 5_4:-16826892 Msa0840940:CDS
AAGTGTATGGTAGAAAAGAA+GGG 0.581845 5_4:-16826782 Msa0840940:CDS
ACTCTTCATTGGAATTCTAA+CGG 0.583362 5_4:-16817221 Msa0840940:CDS
TGCAAGTGTAAATGGACGAA+AGG 0.584785 5_4:-16818622 Msa0840940:CDS
ATGCTCTTAAAGGGACATGA+AGG 0.589728 5_4:-16817082 Msa0840940:CDS
GGAGCGCAGGACCAGATCTA+CGG 0.590239 5_4:+16818517 None:intergenic
AGATCTACGGTGAAGATCAA+AGG 0.590679 5_4:+16818530 None:intergenic
CTCAGAATTGAAAGCCGAGT+CGG 0.591459 5_4:-16829919 Msa0840940:CDS
CATATTATTCAACTAGCATG+CGG 0.594225 5_4:-16830017 Msa0840940:CDS
CAACTCAGCAACAAGAGCTA+GGG 0.594380 5_4:+16826826 None:intergenic
TTTGGTGAGAAACTATCTTG+AGG 0.600093 5_4:-16830138 Msa0840940:CDS
GTATGGTAGAAAAGAAGGGA+GGG 0.600330 5_4:-16826778 Msa0840940:CDS
GCAGCTTTCACTGTCCCTGG+TGG 0.601445 5_4:-16817349 Msa0840940:CDS
ATGAAGAGTCGCAATTGTGA+AGG 0.602500 5_4:+16817007 None:intergenic
TTTCCACGTCTTCATCGGGA+AGG 0.604030 5_4:-16826958 Msa0840940:CDS
AATTGTGAAGAAATTGGTGA+AGG 0.605805 5_4:-16826897 Msa0840940:CDS
TGTATGGTAGAAAAGAAGGG+AGG 0.606849 5_4:-16826779 Msa0840940:CDS
GAATCAGAGTCTGAATCAGA+TGG 0.614849 5_4:-16826405 Msa0840940:CDS
TTATCTATGAAGACCAACAA+TGG 0.623438 5_4:-16826734 Msa0840940:CDS
CTAAAGAAGAGGTTGAAGCA+TGG 0.624945 5_4:-16830064 Msa0840940:CDS
GTGAAAATGAAAGACAATCG+TGG 0.626532 5_4:-16826857 Msa0840940:CDS
AGAGGTTGAAGCATGGAACA+AGG 0.627918 5_4:-16830057 Msa0840940:CDS
CTTGAGGGGCATGATCTGTG+GGG 0.628918 5_4:-16830122 Msa0840940:CDS
ACTCCTTCCCGATGAAGACG+TGG 0.630969 5_4:+16826955 None:intergenic
ACCTTGCTCAATGTCCGACT+CGG 0.634753 5_4:+16829905 None:intergenic
TGGTGAGAAACTATCTTGAG+GGG 0.636699 5_4:-16830136 Msa0840940:CDS
ATGCCTTCTGTGTTCCCAAG+TGG 0.637179 5_4:-16826354 Msa0840940:CDS
GCCGAGTCGGACATTGAGCA+AGG 0.637988 5_4:-16829906 Msa0840940:intron
AATTTCCAGCAAGATGCAAG+AGG 0.642454 5_4:+16818562 None:intergenic
AGTGCGAAAAGTAACTTAAG+CGG 0.647249 5_4:+16817163 None:intergenic
ATCACTATAGACCACTCCAT+AGG 0.652603 5_4:-16827045 Msa0840940:CDS
TCTTCATAGATAATAGGTCA+TGG 0.652975 5_4:+16826744 None:intergenic
CTCTCAATAAACCTATGGAG+TGG 0.653067 5_4:+16827034 None:intergenic
ATTTCCAGCAAGATGCAAGA+GGG 0.653848 5_4:+16818563 None:intergenic
GAAAGCTGCAGCAAACATGA+TGG 0.654889 5_4:+16817363 None:intergenic
CTTTCAGTAAATATCTCACG+AGG 0.661725 5_4:+16817469 None:intergenic
TGTCTTGATTGTTTCCACCA+GGG 0.662086 5_4:+16817335 None:intergenic
CTACGGTGAAGATCAAAGGA+AGG 0.666462 5_4:+16818534 None:intergenic
GGGCGTGGGATCTAAAGAAG+AGG 0.666602 5_4:-16830075 Msa0840940:CDS
TTGTGGGTAAGTGGCAATTG+CGG 0.669818 5_4:+16826432 None:intergenic
GGTGGAAACAATCAAGACAG+TGG 0.670462 5_4:-16817331 Msa0840940:CDS
GATATTTACTGAAAGCCACA+AGG 0.695235 5_4:-16817461 Msa0840940:CDS
GTTGACTGGAAACACCAAAG+TGG 0.700222 5_4:-16826807 Msa0840940:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATACAG+TGG - chr5_4:16818713-16818732 Msa0840940:CDS 10.0%
!!! GTATTTATTTTTTTTCTAAA+GGG + chr5_4:16819816-16819835 None:intergenic 10.0%
!!! TGTATTTATTTTTTTTCTAA+AGG + chr5_4:16819817-16819836 None:intergenic 10.0%
!!! TATATCTTTTTCATTTAATT+AGG - chr5_4:16820050-16820069 Msa0840940:intron 10.0%
!!! TAAGTTGATAATAAATAATT+TGG - chr5_4:16821375-16821394 Msa0840940:intron 10.0%
!! ACAAAAATTAACTTAAAAAT+AGG - chr5_4:16821727-16821746 Msa0840940:intron 10.0%
!! CAAAAATTAACTTAAAAATA+GGG - chr5_4:16821728-16821747 Msa0840940:intron 10.0%
!! GAAAAGTTAATATATTTATA+GGG - chr5_4:16821943-16821962 Msa0840940:intron 10.0%
!! AAAAGTTAATATATTTATAG+GGG - chr5_4:16821944-16821963 Msa0840940:intron 10.0%
!!! AATTGTCATTAATTTAAAAT+GGG + chr5_4:16823020-16823039 None:intergenic 10.0%
!! AAATTGTCATTAATTTAAAA+TGG + chr5_4:16823021-16823040 None:intergenic 10.0%
!! TAAAAGAAGAAAAAAAAAAT+TGG - chr5_4:16824677-16824696 Msa0840940:intron 10.0%
!! TTATCATTTAAAAAAGATAA+CGG + chr5_4:16824906-16824925 None:intergenic 10.0%
!!! TTATCTTTTTTAAATGATAA+GGG - chr5_4:16824906-16824925 Msa0840940:intron 10.0%
!!! AAAATTCCATTTTTAAAAAA+AGG + chr5_4:16826274-16826293 None:intergenic 10.0%
!!! AATTTTGAAATGATTAAAAA+AGG - chr5_4:16826288-16826307 Msa0840940:intron 10.0%
!! ATAAATGAAAATTAAACTAA+CGG - chr5_4:16826645-16826664 Msa0840940:CDS 10.0%
!!! TTTTTTACTTTTAATGATAT+TGG - chr5_4:16827049-16827068 Msa0840940:CDS 10.0%
!! TAAAATGTCATTAATTTAAA+TGG - chr5_4:16827148-16827167 Msa0840940:intron 10.0%
!! AAAATGTCATTAATTTAAAT+GGG - chr5_4:16827149-16827168 Msa0840940:intron 10.0%
!!! AAAAAAAATGTTTCTAATTT+CGG + chr5_4:16827812-16827831 None:intergenic 10.0%
!!! TTTTTTATTTTTAATTCACA+GGG - chr5_4:16828956-16828975 Msa0840940:intron 10.0%
!!! TTTATCTTTTGTTATAAAAA+TGG - chr5_4:16829399-16829418 Msa0840940:intron 10.0%
!!! AATTATTTTAGTGCATTATA+CGG - chr5_4:16817240-16817259 Msa0840940:CDS 15.0%
!!! CTTATTTATAAGAAACTTTT+AGG - chr5_4:16817386-16817405 Msa0840940:CDS 15.0%
!! TCAATAAAAGTTAATGTATT+TGG + chr5_4:16817448-16817467 None:intergenic 15.0%
!! AAATAATAAAATACTCAATC+AGG + chr5_4:16817495-16817514 None:intergenic 15.0%
!!! TGATATCCTAATTTAATTTA+GGG + chr5_4:16817964-16817983 None:intergenic 15.0%
!! ATTATCAACAATTCTAAATT+GGG - chr5_4:16819090-16819109 Msa0840940:intron 15.0%
!!! TTTTTTTTAAGTAGGAAAAA+TGG - chr5_4:16819400-16819419 Msa0840940:intron 15.0%
!! AAATAAAATAAAAGAGATTG+AGG - chr5_4:16819642-16819661 Msa0840940:intron 15.0%
!!! AGTCTAGTTTTTTTTATTAT+CGG - chr5_4:16820892-16820911 Msa0840940:intron 15.0%
!!! TAGTTTTTATTTTGCATTTA+TGG + chr5_4:16820932-16820951 None:intergenic 15.0%
!!! GTAAATATATGTTTTTGTAA+AGG - chr5_4:16821397-16821416 Msa0840940:intron 15.0%
!!! TATGAATTTACTTTAAAGTA+GGG + chr5_4:16821530-16821549 None:intergenic 15.0%
!!! ATATGAATTTACTTTAAAGT+AGG + chr5_4:16821531-16821550 None:intergenic 15.0%
!!! ATGAATTTTTATATTTTTGG+AGG - chr5_4:16821601-16821620 Msa0840940:intron 15.0%
!!! AAATTGAAGAAATTTTTTAG+AGG - chr5_4:16821787-16821806 Msa0840940:intron 15.0%
!!! AATTGAAGAAATTTTTTAGA+GGG - chr5_4:16821788-16821807 Msa0840940:intron 15.0%
!! CGAAAAGTTAATATATTTAT+AGG - chr5_4:16821942-16821961 Msa0840940:intron 15.0%
!!! TTACTTTTGCTATTAAAAAA+AGG + chr5_4:16821986-16822005 None:intergenic 15.0%
!! GTAATGTTATAAATAGATAA+AGG - chr5_4:16822002-16822021 Msa0840940:intron 15.0%
!! AAGAAAAAAAAAACTAAAAC+AGG - chr5_4:16822098-16822117 Msa0840940:intron 15.0%
!! GATTACATAAATTTAATATG+TGG + chr5_4:16822712-16822731 None:intergenic 15.0%
!!! AAATGTTATTTTTAAAATGG+AGG + chr5_4:16822948-16822967 None:intergenic 15.0%
!!! AATGATGATAAAAAAGATTT+TGG + chr5_4:16823095-16823114 None:intergenic 15.0%
!!! TATGTGTGTATATTTTTTTT+AGG - chr5_4:16823380-16823399 Msa0840940:intron 15.0%
!!! ATGTGTGTATATTTTTTTTA+GGG - chr5_4:16823381-16823400 Msa0840940:intron 15.0%
!! ACCTAAAATAAATTACAATT+CGG + chr5_4:16823565-16823584 None:intergenic 15.0%
!!! AAAATTTTGTCCATTTTTTA+TGG + chr5_4:16824319-16824338 None:intergenic 15.0%
!! TGAGATAAAATATTTATTCT+TGG + chr5_4:16824427-16824446 None:intergenic 15.0%
!!! TAAACACGTTATTTTATTTT+TGG + chr5_4:16824742-16824761 None:intergenic 15.0%
!! ATATTTAAATTTACTCTCAT+CGG - chr5_4:16824776-16824795 Msa0840940:intron 15.0%
!!! GTTATCTTTTTTAAATGATA+AGG - chr5_4:16824905-16824924 Msa0840940:intron 15.0%
!!! ATATTTGTATTTAAAGTTGA+GGG - chr5_4:16825004-16825023 Msa0840940:intron 15.0%
!!! ATAAAGAAAATAAACCTTTT+TGG - chr5_4:16825214-16825233 Msa0840940:intron 15.0%
!!! ATTTTTAAAATTGGAATCTT+CGG - chr5_4:16825271-16825290 Msa0840940:intron 15.0%
!! TGGTATCAAATATAATTAAT+CGG - chr5_4:16825383-16825402 Msa0840940:intron 15.0%
!!! ATTTTGAAAATCATAAACTT+CGG - chr5_4:16825453-16825472 Msa0840940:intron 15.0%
!! ATATATTTGATATTGTTAGT+CGG + chr5_4:16825927-16825946 None:intergenic 15.0%
!!! CTGAACATTTTAATTTTTTA+AGG - chr5_4:16826093-16826112 Msa0840940:intron 15.0%
!!! CATTTTAATTTTTTAAGGAA+AGG - chr5_4:16826098-16826117 Msa0840940:intron 15.0%
!! AAAAGTTAAATAAAATCAAG+AGG + chr5_4:16826232-16826251 None:intergenic 15.0%
!! TCAATAAAATGTAGATAATT+AGG + chr5_4:16826318-16826337 None:intergenic 15.0%
!!! GTTTTTTATTAGTTTTGAAA+AGG - chr5_4:16826428-16826447 Msa0840940:CDS 15.0%
!!! TTTTTGTTATTTGAATGTTT+TGG - chr5_4:16826618-16826637 Msa0840940:CDS 15.0%
!! TGAATTTATTCATTAGATTA+GGG + chr5_4:16826727-16826746 None:intergenic 15.0%
!! TTGAATTTATTCATTAGATT+AGG + chr5_4:16826728-16826747 None:intergenic 15.0%
!!! TATATGTGTATATTTTTTGA+GGG + chr5_4:16826887-16826906 None:intergenic 15.0%
!!! TTATATGTGTATATTTTTTG+AGG + chr5_4:16826888-16826907 None:intergenic 15.0%
!! ATTGGTAAATTTAATGATAT+TGG - chr5_4:16827067-16827086 Msa0840940:intron 15.0%
!!! GAAAAATCTAATTAATTTGA+TGG - chr5_4:16827116-16827135 Msa0840940:intron 15.0%
!! AAATGTCATTAATTTAAATG+GGG - chr5_4:16827150-16827169 Msa0840940:intron 15.0%
!!! CTTAAATTCTTGAATTTTTT+GGG + chr5_4:16828349-16828368 None:intergenic 15.0%
!! TCTATTGATAAAAATAAAAG+AGG - chr5_4:16828480-16828499 Msa0840940:intron 15.0%
!!! CTTTTTTATTTTTAATTCAC+AGG - chr5_4:16828955-16828974 Msa0840940:intron 15.0%
!! TGCAAAATAAATTGTTTATA+TGG - chr5_4:16829466-16829485 Msa0840940:intron 15.0%
!!! ACTAACTATATTTTATGAAA+TGG - chr5_4:16829620-16829639 Msa0840940:intron 15.0%
!! GATATTAGAGATTAAATAGA+CGG + chr5_4:16817319-16817338 None:intergenic 20.0%
!! TCAACAAAATGTGATATATT+TGG - chr5_4:16817409-16817428 Msa0840940:CDS 20.0%
!! GATATATTTGGTTAAGAATT+TGG - chr5_4:16817421-16817440 Msa0840940:CDS 20.0%
!! ATTATCCAATAAATAGATGA+TGG + chr5_4:16817627-16817646 None:intergenic 20.0%
!! AATTATTCAATAAAGGAATG+AGG - chr5_4:16817698-16817717 Msa0840940:intron 20.0%
!!! GATATCCTAATTTAATTTAG+GGG + chr5_4:16817963-16817982 None:intergenic 20.0%
!!! GTGATATCCTAATTTAATTT+AGG + chr5_4:16817965-16817984 None:intergenic 20.0%
!!! TTCCACAAAAATAATTTGTA+AGG - chr5_4:16817986-16818005 Msa0840940:intron 20.0%
!!! TCAAGCATTTTTATTTTATG+TGG - chr5_4:16818047-16818066 Msa0840940:intron 20.0%
!!! TTTTATTTTATGTGGAACTT+AGG - chr5_4:16818055-16818074 Msa0840940:intron 20.0%
!!! ATCTAAAAGTCAGTTTTATA+AGG + chr5_4:16818404-16818423 None:intergenic 20.0%
!! AAATGAACAACTTAAATTAG+TGG + chr5_4:16818489-16818508 None:intergenic 20.0%
!! TATATATATATATACAGTGG+CGG - chr5_4:16818716-16818735 Msa0840940:CDS 20.0%
!! TTCAGAATAATTATTGCTAA+AGG + chr5_4:16819043-16819062 None:intergenic 20.0%
!! AGCAATAATTATTCTGAATT+AGG - chr5_4:16819045-16819064 Msa0840940:intron 20.0%
!! GCAATAATTATTCTGAATTA+GGG - chr5_4:16819046-16819065 Msa0840940:intron 20.0%
!! GATTATCAACAATTCTAAAT+TGG - chr5_4:16819089-16819108 Msa0840940:intron 20.0%
!! TTATCAACAATTCTAAATTG+GGG - chr5_4:16819091-16819110 Msa0840940:intron 20.0%
!!! GATGTTTGTTATTTGTTAAT+GGG + chr5_4:16819145-16819164 None:intergenic 20.0%
!!! TGATGTTTGTTATTTGTTAA+TGG + chr5_4:16819146-16819165 None:intergenic 20.0%
!! CAAAATAGAACAAATAACAA+AGG - chr5_4:16819170-16819189 Msa0840940:intron 20.0%
!!! GTCTCTTTTTTTTTTTAAGT+AGG - chr5_4:16819392-16819411 Msa0840940:intron 20.0%
!!! TTTTTATTCTTAGAAACAGA+TGG + chr5_4:16819737-16819756 None:intergenic 20.0%
!! ATGTTGTTAATAATGTTTAG+TGG + chr5_4:16819969-16819988 None:intergenic 20.0%
!!! TAAAATACATGTTAATTTGC+AGG - chr5_4:16820094-16820113 Msa0840940:intron 20.0%
!! ATGCAAAATTATTCATGAAA+AGG - chr5_4:16820185-16820204 Msa0840940:intron 20.0%
!! TGCAAAATTATTCATGAAAA+GGG - chr5_4:16820186-16820205 Msa0840940:intron 20.0%
!!! AATCAACAAATGGTTTTTTT+AGG + chr5_4:16820984-16821003 None:intergenic 20.0%
!!! TCTTTAAAGTAATCAACAAA+TGG + chr5_4:16820994-16821013 None:intergenic 20.0%
!!! TTGTTTGACTATTTTTTTAG+AGG - chr5_4:16821096-16821115 Msa0840940:intron 20.0%
!!! TGTTTGACTATTTTTTTAGA+GGG - chr5_4:16821097-16821116 Msa0840940:intron 20.0%
!!! TTGGATATATTTAAAGTTCA+TGG - chr5_4:16821197-16821216 Msa0840940:intron 20.0%
!!! TAATTTTCAACTACTACTTT+TGG + chr5_4:16821755-16821774 None:intergenic 20.0%
!! TACATAAATTTAATATGTGG+TGG + chr5_4:16822709-16822728 None:intergenic 20.0%
!! ATGTTCATTTGATATATGTA+AGG - chr5_4:16822855-16822874 Msa0840940:intron 20.0%
!! TTTGTAAAGCAATTCTTAAT+TGG + chr5_4:16823160-16823179 None:intergenic 20.0%
!!! TTGTGTTTAAGTTATATGAT+AGG + chr5_4:16823243-16823262 None:intergenic 20.0%
!!! TAATTTAATCAAAGAAGCAT+TGG + chr5_4:16823268-16823287 None:intergenic 20.0%
!! GCTTCTTTGATTAAATTAAT+TGG - chr5_4:16823270-16823289 Msa0840940:intron 20.0%
!! TACAAACTATATGTTATTAG+TGG - chr5_4:16823295-16823314 Msa0840940:intron 20.0%
!! TTTACTAAAGCATAGATTAT+AGG + chr5_4:16823345-16823364 None:intergenic 20.0%
!!! ACCGAATTGTAATTTATTTT+AGG - chr5_4:16823561-16823580 Msa0840940:intron 20.0%
!! AAATTTATGTGCTTATATTG+CGG - chr5_4:16823906-16823925 Msa0840940:intron 20.0%
!! ATCTTTATTAATTTCACTAG+CGG - chr5_4:16824172-16824191 Msa0840940:intron 20.0%
!!! TTTCCTTTTATTATTCCTTA+AGG - chr5_4:16824522-16824541 Msa0840940:intron 20.0%
!! AAATTATAGCATATCCAAAT+TGG + chr5_4:16824572-16824591 None:intergenic 20.0%
!!! AGTATGTTACACTTTTTTTA+AGG - chr5_4:16824653-16824672 Msa0840940:intron 20.0%
!! TAAATGATAAGGAAAAAAAC+CGG - chr5_4:16824810-16824829 Msa0840940:intron 20.0%
!! TGTAATAAATTGTATATGTC+CGG + chr5_4:16824832-16824851 None:intergenic 20.0%
!!! GATATTTGTATTTAAAGTTG+AGG - chr5_4:16825003-16825022 Msa0840940:intron 20.0%
!!! AAAATAGAAGTATAGATACT+TGG - chr5_4:16825094-16825113 Msa0840940:intron 20.0%
!! CAAATGATTATATTCCAAAA+AGG + chr5_4:16825231-16825250 None:intergenic 20.0%
!!! CTTTTTGGAATATAATCATT+TGG - chr5_4:16825229-16825248 Msa0840940:intron 20.0%
!!! AGAACTGGAATTTTTAAAAT+TGG - chr5_4:16825262-16825281 Msa0840940:intron 20.0%
!! TTATATTTGATACCATTTGT+CGG + chr5_4:16825378-16825397 None:intergenic 20.0%
!! ATGTTAATTAGGTTTCTAAT+GGG + chr5_4:16825502-16825521 None:intergenic 20.0%
!! ATTATGAAAATCAGAATCTT+CGG - chr5_4:16825819-16825838 Msa0840940:intron 20.0%
!!! ATTTCGAAATTTGGAATATT+CGG - chr5_4:16826002-16826021 Msa0840940:intron 20.0%
!!! ATGTTTGTTTTTTATTGGTT+TGG - chr5_4:16827249-16827268 Msa0840940:intron 20.0%
!!! TGTTTGTTTTTTATTGGTTT+GGG - chr5_4:16827250-16827269 Msa0840940:intron 20.0%
!! TTAGTAATATTAAAGTTGTG+TGG - chr5_4:16827778-16827797 Msa0840940:intron 20.0%
!!! TTTTTCTTTTCTTTCTTTTG+TGG - chr5_4:16827828-16827847 Msa0840940:intron 20.0%
!!! CCTTAAATTCTTGAATTTTT+TGG + chr5_4:16828350-16828369 None:intergenic 20.0%
!! CCAAAAAATTCAAGAATTTA+AGG - chr5_4:16828347-16828366 Msa0840940:intron 20.0%
!! GTTCAAAATGCAAAATAAAT+AGG - chr5_4:16828922-16828941 Msa0840940:intron 20.0%
!!! TGTCTTTTTTTTTGTTACAA+TGG - chr5_4:16829108-16829127 Msa0840940:intron 20.0%
!! AGACTATTTGAGAAAATTAA+TGG - chr5_4:16829269-16829288 Msa0840940:intron 20.0%
!! TTAAAGAAATAAGGTGAAAA+CGG + chr5_4:16829319-16829338 None:intergenic 20.0%
!!! AAGTTATAACCTATTTTCAT+AGG + chr5_4:16829356-16829375 None:intergenic 20.0%
!! TATAATGAAGTATGTATGTT+TGG + chr5_4:16829565-16829584 None:intergenic 20.0%
!!! CACCTTACAAATTATTTTTG+TGG + chr5_4:16817991-16818010 None:intergenic 25.0%
! ATCCATGGTAAATTTAGTAT+GGG + chr5_4:16818530-16818549 None:intergenic 25.0%
! TATCCATGGTAAATTTAGTA+TGG + chr5_4:16818531-16818550 None:intergenic 25.0%
! GTACTAATTTCAACGAAATA+AGG + chr5_4:16818636-16818655 None:intergenic 25.0%
! GTCATAAATCGAAATAAAAG+AGG - chr5_4:16818812-16818831 Msa0840940:CDS 25.0%
! GTATATTTGTACTCAGATTA+TGG + chr5_4:16819855-16819874 None:intergenic 25.0%
! TGTTAATAATGTTTAGTGGA+TGG + chr5_4:16819965-16819984 None:intergenic 25.0%
!! ATTTCTTCCAAATGAGTTTT+AGG + chr5_4:16820535-16820554 None:intergenic 25.0%
!! ACAGATAAAGATTTTCACAA+TGG - chr5_4:16820556-16820575 Msa0840940:intron 25.0%
!! ATGCAGAAATATTTTGTAAG+TGG - chr5_4:16820605-16820624 Msa0840940:intron 25.0%
! ATGCTAATATGTTGTCAATT+AGG - chr5_4:16820699-16820718 Msa0840940:intron 25.0%
!!! TTTTAGGAACAAATGGTTTT+AGG + chr5_4:16820968-16820987 None:intergenic 25.0%
!!! ATGGTTTTTTTAGGAACAAA+TGG + chr5_4:16820975-16820994 None:intergenic 25.0%
! GAACTTTAAATATATCCAAC+CGG + chr5_4:16821196-16821215 None:intergenic 25.0%
! TCTCAAAACTGAAAACAAAA+TGG + chr5_4:16821240-16821259 None:intergenic 25.0%
!! CTAGAAGTTGAAGAAAATTT+TGG + chr5_4:16821475-16821494 None:intergenic 25.0%
!! AAATGAAGATGGAAAACTTT+TGG + chr5_4:16821502-16821521 None:intergenic 25.0%
!! AAGTTTTCCATCTTCATTTT+TGG - chr5_4:16821503-16821522 Msa0840940:intron 25.0%
! TTTAACGAAGAATCATTTCT+AGG - chr5_4:16822317-16822336 Msa0840940:intron 25.0%
!!! GTTTTCTAGGGTTAAATTTT+GGG + chr5_4:16822476-16822495 None:intergenic 25.0%
!!! TGTTTTCTAGGGTTAAATTT+TGG + chr5_4:16822477-16822496 None:intergenic 25.0%
! TTAAAAAATATCATCACACC+TGG - chr5_4:16823191-16823210 Msa0840940:intron 25.0%
! TAAAAAATATCATCACACCT+GGG - chr5_4:16823192-16823211 Msa0840940:intron 25.0%
! ATCTGATTCAAAAGAAATGT+TGG + chr5_4:16823588-16823607 None:intergenic 25.0%
! GAATCAGATGAACTATTTAA+AGG - chr5_4:16823599-16823618 Msa0840940:intron 25.0%
!! ATTATTTTCTCGTTGAGATA+CGG - chr5_4:16823989-16824008 Msa0840940:intron 25.0%
!! ATGAATAACTTCCTTTAGAA+GGG + chr5_4:16824091-16824110 None:intergenic 25.0%
!! TATGAAACTCTTTTTACTTC+CGG - chr5_4:16824116-16824135 Msa0840940:intron 25.0%
!! AAGTTGAAGGTAATTTTGAA+AGG - chr5_4:16824244-16824263 Msa0840940:intron 25.0%
!! TTTTTATGGTCCAAATTGTA+TGG + chr5_4:16824305-16824324 None:intergenic 25.0%
! ACAATTTGGACCATAAAAAA+TGG - chr5_4:16824306-16824325 Msa0840940:intron 25.0%
!! TATTCTTGGATCATTGATTA+TGG + chr5_4:16824413-16824432 None:intergenic 25.0%
! AGACCTTAAGGAATAATAAA+AGG + chr5_4:16824528-16824547 None:intergenic 25.0%
!!! ATTTTGACTAGGTTTCTAAT+GGG + chr5_4:16825319-16825338 None:intergenic 25.0%
! AATAAGAACGAAACATGAAT+TGG - chr5_4:16825429-16825448 Msa0840940:intron 25.0%
! CATGTTAATTAGGTTTCTAA+TGG + chr5_4:16825503-16825522 None:intergenic 25.0%
! CATTAGAAACCTAATTAACA+TGG - chr5_4:16825501-16825520 Msa0840940:intron 25.0%
! TTATATTTGATACCGTTAGT+CGG + chr5_4:16825561-16825580 None:intergenic 25.0%
! TTCAATAAAGTCACATTCAA+CGG + chr5_4:16825593-16825612 None:intergenic 25.0%
!!! ATTTTGGAAATCAGAATCTT+CGG - chr5_4:16825636-16825655 Msa0840940:intron 25.0%
! TTATATTTGACACAGTTAGT+CGG + chr5_4:16825744-16825763 None:intergenic 25.0%
! TCTAATAAGGTCATATTCAA+CGG + chr5_4:16825776-16825795 None:intergenic 25.0%
! TATTAGAAATCTAGTCAACA+TGG - chr5_4:16825867-16825886 Msa0840940:intron 25.0%
! TGAATTGGAATTTCGAAATT+TGG - chr5_4:16825993-16826012 Msa0840940:intron 25.0%
!! ACCCTAAATCTTTTCAATAT+GGG + chr5_4:16826145-16826164 None:intergenic 25.0%
!! AACCCTAAATCTTTTCAATA+TGG + chr5_4:16826146-16826165 None:intergenic 25.0%
!! TATTGAAAAGATTTAGGGTT+CGG - chr5_4:16826146-16826165 Msa0840940:intron 25.0%
!! TAGAGTACTACGAATATTTA+GGG + chr5_4:16826203-16826222 None:intergenic 25.0%
!!! TGCTTGCCTTTTTTTAAAAA+TGG - chr5_4:16826265-16826284 Msa0840940:intron 25.0%
!!! CTACATTTTATTGATTTGAG+AGG - chr5_4:16826324-16826343 Msa0840940:CDS 25.0%
!!! TTTTAAAGTAAAAAGCCAAG+TGG - chr5_4:16826451-16826470 Msa0840940:CDS 25.0%
! TATTGAAAAATGACTCAAAG+TGG - chr5_4:16826501-16826520 Msa0840940:intron 25.0%
! AAGTAAAAAATATCAGACCT+GGG + chr5_4:16827039-16827058 None:intergenic 25.0%
! AAAGTAAAAAATATCAGACC+TGG + chr5_4:16827040-16827059 None:intergenic 25.0%
! TCTTTCATTCCAATTAAGAA+TGG + chr5_4:16827098-16827117 None:intergenic 25.0%
!!! GACACATGTTTGTTTTTTAT+TGG - chr5_4:16827244-16827263 Msa0840940:intron 25.0%
!! TCTAAATTGCCTTTGAAAAT+TGG + chr5_4:16827287-16827306 None:intergenic 25.0%
! TTATTCTCTCTTTCTTCTTT+AGG - chr5_4:16827403-16827422 Msa0840940:intron 25.0%
!!! TAGGTATTTTTCAATTCTCA+TGG - chr5_4:16827485-16827504 Msa0840940:intron 25.0%
!! TTTTATCAATAGACCATAAG+AGG + chr5_4:16828473-16828492 None:intergenic 25.0%
! ATAAAATCTCTCTTTGCATT+TGG + chr5_4:16828689-16828708 None:intergenic 25.0%
!! AAATGCAAAGAGAGATTTTA+TGG - chr5_4:16828688-16828707 Msa0840940:intron 25.0%
!! AAGTTTGAAACTCTAAACTA+AGG + chr5_4:16828852-16828871 None:intergenic 25.0%
!!! TTTTGAGTTCTTGAATTTCT+TGG - chr5_4:16828870-16828889 Msa0840940:intron 25.0%
! GGTGCAAAATTAATATCATA+AGG - chr5_4:16828900-16828919 Msa0840940:intron 25.0%
! CTTATGAAAACAGTTTATTG+TGG - chr5_4:16829157-16829176 Msa0840940:intron 25.0%
! CTAGATAAAATCAAGTCAAA+CGG + chr5_4:16829186-16829205 None:intergenic 25.0%
! CTAGTTTAACCTATGAAAAT+AGG - chr5_4:16829344-16829363 Msa0840940:intron 25.0%
! AACATAAGTGTGTATCATAT+AGG + chr5_4:16829517-16829536 None:intergenic 25.0%
! CATACTTCATTATAGCAAAA+TGG - chr5_4:16829571-16829590 Msa0840940:intron 25.0%
! TTTATGAAATGGATGATTGA+AGG - chr5_4:16829631-16829650 Msa0840940:intron 25.0%
!! CTTCTTATCTTCTACATTTT+TGG + chr5_4:16829693-16829712 None:intergenic 25.0%
! TCGTAATTGTCTTTTGTTAG+TGG + chr5_4:16817012-16817031 None:intergenic 30.0%
CAAAAGACAATTACGATAAC+TGG - chr5_4:16817016-16817035 Msa0840940:CDS 30.0%
!! TGTGACTTCTGTTTCTAAAA+TGG - chr5_4:16817086-16817105 Msa0840940:CDS 30.0%
!! GTGACTTCTGTTTCTAAAAT+GGG - chr5_4:16817087-16817106 Msa0840940:CDS 30.0%
CATATTATTCAACTAGCATG+CGG - chr5_4:16817165-16817184 Msa0840940:CDS 30.0%
TAATACATTGCAACATTCGA+AGG - chr5_4:16817643-16817662 Msa0840940:intron 30.0%
AATACATTGCAACATTCGAA+GGG - chr5_4:16817644-16817663 Msa0840940:intron 30.0%
ATTCAATAAAGGAATGAGGA+TGG - chr5_4:16817702-16817721 Msa0840940:intron 30.0%
TTCAATAAAGGAATGAGGAT+GGG - chr5_4:16817703-16817722 Msa0840940:intron 30.0%
AGTATCAATCGGTTATAGAA+AGG + chr5_4:16817933-16817952 None:intergenic 30.0%
GTTGACCCCTAAATTAAATT+AGG - chr5_4:16817955-16817974 Msa0840940:intron 30.0%
GCTATTGCTAGCATTATTAT+TGG + chr5_4:16818093-16818112 None:intergenic 30.0%
TCGTGTATGCATATAAATTG+CGG - chr5_4:16818314-16818333 Msa0840940:intron 30.0%
TATATATATTGCACACACTG+TGG + chr5_4:16818658-16818677 None:intergenic 30.0%
!! TTGGTGCTGATTAATTTCAT+TGG + chr5_4:16818974-16818993 None:intergenic 30.0%
!! GCTTTGAGATTGAATTTCAT+TGG + chr5_4:16818993-16819012 None:intergenic 30.0%
AGGGTTTGAGAAATCAAAAT+TGG - chr5_4:16819065-16819084 Msa0840940:intron 30.0%
GGGTTTGAGAAATCAAAATT+GGG - chr5_4:16819066-16819085 Msa0840940:intron 30.0%
GGTTTGAGAAATCAAAATTG+GGG - chr5_4:16819067-16819086 Msa0840940:intron 30.0%
AACAATTCTAAATTGGGGTT+TGG - chr5_4:16819096-16819115 Msa0840940:intron 30.0%
ACATAGAATTAGAACAAACC+AGG - chr5_4:16819198-16819217 Msa0840940:intron 30.0%
TTAAGTAGGAAAAATGGCAT+TGG - chr5_4:16819406-16819425 Msa0840940:intron 30.0%
TAAGTAGGAAAAATGGCATT+GGG - chr5_4:16819407-16819426 Msa0840940:intron 30.0%
CATTACTCATACAATCAACA+CGG + chr5_4:16819915-16819934 None:intergenic 30.0%
CGAAGAAATTGTGAAGAAAT+TGG - chr5_4:16820279-16820298 Msa0840940:intron 30.0%
AATTGTGAAGAAATTGGTGA+AGG - chr5_4:16820285-16820304 Msa0840940:intron 30.0%
AAAGTGTATGGTAGAAAAGA+AGG - chr5_4:16820399-16820418 Msa0840940:intron 30.0%
AAGTGTATGGTAGAAAAGAA+GGG - chr5_4:16820400-16820419 Msa0840940:intron 30.0%
TCTTCATAGATAATAGGTCA+TGG + chr5_4:16820441-16820460 None:intergenic 30.0%
!! TGTTGGTCTTCATAGATAAT+AGG + chr5_4:16820447-16820466 None:intergenic 30.0%
TTATCTATGAAGACCAACAA+TGG - chr5_4:16820448-16820467 Msa0840940:intron 30.0%
TCTTGTTCCTAAAACTCATT+TGG - chr5_4:16820525-16820544 Msa0840940:intron 30.0%
AATATGTTGTCAATTAGGTG+TGG - chr5_4:16820704-16820723 Msa0840940:intron 30.0%
TTGAGATTACCTGAAAGAAA+AGG - chr5_4:16821254-16821273 Msa0840940:intron 30.0%
TGAGATTACCTGAAAGAAAA+GGG - chr5_4:16821255-16821274 Msa0840940:intron 30.0%
! AGAAAAGGGCATAACTTATA+TGG - chr5_4:16821269-16821288 Msa0840940:intron 30.0%
! GAAAAGGGCATAACTTATAT+GGG - chr5_4:16821270-16821289 Msa0840940:intron 30.0%
!!! GATGTTTTGAGTTGTTTTTC+CGG + chr5_4:16821326-16821345 None:intergenic 30.0%
! GAAGTTGAAGAAAATTTTGG+AGG + chr5_4:16821472-16821491 None:intergenic 30.0%
TATATAGTCAAGGTGTGTTT+GGG + chr5_4:16822133-16822152 None:intergenic 30.0%
!! CTTTTTGGTGTATATAGTCA+AGG + chr5_4:16822143-16822162 None:intergenic 30.0%
TATATACACCAAAAAGCTGA+AGG - chr5_4:16822147-16822166 Msa0840940:intron 30.0%
ATATACACCAAAAAGCTGAA+GGG - chr5_4:16822148-16822167 Msa0840940:intron 30.0%
CTCTTTATCTTACTACGATT+GGG + chr5_4:16822286-16822305 None:intergenic 30.0%
ATGTTGTTGTGTGATCTATA+TGG + chr5_4:16822419-16822438 None:intergenic 30.0%
TTATGTGATATCAGCCTATA+TGG + chr5_4:16822623-16822642 None:intergenic 30.0%
AAATTTAATATGTGGTGGCT+AGG + chr5_4:16822704-16822723 None:intergenic 30.0%
CATTTGATATATGTAAGGTG+AGG - chr5_4:16822860-16822879 Msa0840940:intron 30.0%
!!! TGGCTGTTTTTTATTGGTTT+GGG + chr5_4:16822920-16822939 None:intergenic 30.0%
!!! ATGGCTGTTTTTTATTGGTT+TGG + chr5_4:16822921-16822940 None:intergenic 30.0%
!!! TTTTTAAAATGGAGGACACA+TGG + chr5_4:16822940-16822959 None:intergenic 30.0%
CATGAATAACTTCCTTTAGA+AGG + chr5_4:16824092-16824111 None:intergenic 30.0%
!!! CAATTTTTTGCTACTTGTTC+CGG + chr5_4:16824138-16824157 None:intergenic 30.0%
!! ATTTTCTGGTCCATACAATT+TGG - chr5_4:16824292-16824311 Msa0840940:intron 30.0%
TTATTATTCCTTAAGGTCTC+AGG - chr5_4:16824529-16824548 Msa0840940:intron 30.0%
!!! CATTTTGACTAGGTTTCTAA+TGG + chr5_4:16825320-16825339 None:intergenic 30.0%
CATTAGAAACCTAGTCAAAA+TGG - chr5_4:16825318-16825337 Msa0840940:intron 30.0%
!!! AATATCCTTCCATTTTGACT+AGG + chr5_4:16825330-16825349 None:intergenic 30.0%
TCCAATAAGGTCATATTCAA+CGG + chr5_4:16825410-16825429 None:intergenic 30.0%
GTTTCGTTCTTATTCCAATA+AGG + chr5_4:16825423-16825442 None:intergenic 30.0%
AGAAACCTAATTAACATGGA+AGG - chr5_4:16825505-16825524 Msa0840940:intron 30.0%
GAAACCTAATTAACATGGAA+GGG - chr5_4:16825506-16825525 Msa0840940:intron 30.0%
TATTGAAATAAGAACGAAGC+AGG - chr5_4:16825606-16825625 Msa0840940:intron 30.0%
! AATATTCTTTCATGTTGGCT+AGG + chr5_4:16825696-16825715 None:intergenic 30.0%
GGAGTAATATTCTTTCATGT+TGG + chr5_4:16825701-16825720 None:intergenic 30.0%
GCTTCGTTCTTATTCTAATA+AGG + chr5_4:16825789-16825808 None:intergenic 30.0%
TATTAGAATAAGAACGAAGC+AGG - chr5_4:16825789-16825808 Msa0840940:intron 30.0%
TTTGATATTGTTAGTCGGTT+GGG + chr5_4:16825922-16825941 None:intergenic 30.0%
ATTTGATATTGTTAGTCGGT+TGG + chr5_4:16825923-16825942 None:intergenic 30.0%
ACTTCGTTCTTATGTCAATA+AGG + chr5_4:16825972-16825991 None:intergenic 30.0%
CATAAGAACGAAGTATGAAT+TGG - chr5_4:16825978-16825997 Msa0840940:intron 30.0%
ACCCCATATTGAAAAGATTT+AGG - chr5_4:16826140-16826159 Msa0840940:intron 30.0%
! CCCTAAATCTTTTCAATATG+GGG + chr5_4:16826144-16826163 None:intergenic 30.0%
CCCCATATTGAAAAGATTTA+GGG - chr5_4:16826141-16826160 Msa0840940:intron 30.0%
! ATTGAAAAGATTTAGGGTTC+GGG - chr5_4:16826147-16826166 Msa0840940:intron 30.0%
! GTAGAGTACTACGAATATTT+AGG + chr5_4:16826204-16826223 None:intergenic 30.0%
! AACCTTGATTTTCAATCAAG+TGG + chr5_4:16826576-16826595 None:intergenic 30.0%
! TCATTAGATTAGGGATTTTG+TGG + chr5_4:16826718-16826737 None:intergenic 30.0%
TTGGTAAAGCCATTCTTAAT+TGG - chr5_4:16827086-16827105 Msa0840940:intron 30.0%
! AATTGCCTTTGAAAATTGGT+GGG + chr5_4:16827283-16827302 None:intergenic 30.0%
! AAATTGCCTTTGAAAATTGG+TGG + chr5_4:16827284-16827303 None:intergenic 30.0%
CAAGTACATCTCTTAAGTAT+AGG - chr5_4:16827466-16827485 Msa0840940:intron 30.0%
! TGTATTTTCCCTGATATTTG+TGG + chr5_4:16827522-16827541 None:intergenic 30.0%
TGTGTGTGTGAGAAAAATAA+TGG + chr5_4:16827608-16827627 None:intergenic 30.0%
!! ATTTTGATGACTCCTTTTTC+AGG - chr5_4:16827718-16827737 Msa0840940:intron 30.0%
ATAAGTATTCGACCTGAAAA+AGG + chr5_4:16827733-16827752 None:intergenic 30.0%
! ACATATTCAGATGTCATTTC+AGG - chr5_4:16827753-16827772 Msa0840940:intron 30.0%
! TTTCTTTCTTTTGTGGCTAT+TGG - chr5_4:16827835-16827854 Msa0840940:intron 30.0%
TGTTGTCTTAACAATGACTA+TGG - chr5_4:16827930-16827949 Msa0840940:intron 30.0%
! CTATTTCTCTACAACTTAGA+TGG + chr5_4:16828059-16828078 None:intergenic 30.0%
CATCTAAGTTGTAGAGAAAT+AGG - chr5_4:16828057-16828076 Msa0840940:intron 30.0%
TGCAACATACTTGATATGTT+GGG + chr5_4:16828105-16828124 None:intergenic 30.0%
TTGCAACATACTTGATATGT+TGG + chr5_4:16828106-16828125 None:intergenic 30.0%
! TCGTATATTTCTTTTATCGC+TGG + chr5_4:16828279-16828298 None:intergenic 30.0%
ATACATGATGCAAGTGTAAA+TGG - chr5_4:16828552-16828571 Msa0840940:intron 30.0%
! AAGAGAGATTTTATGGTTTC+AGG - chr5_4:16828695-16828714 Msa0840940:intron 30.0%
CTTGAATTTCTTGGCTATAA+TGG - chr5_4:16828879-16828898 Msa0840940:intron 30.0%
AGGATCTTATTCATTTGAGT+AGG + chr5_4:16828992-16829011 None:intergenic 30.0%
CTAGAGAGCTTAAAGAAATA+AGG + chr5_4:16829328-16829347 None:intergenic 30.0%
TAGGCAGTTTGTATAAACTA+TGG + chr5_4:16829498-16829517 None:intergenic 30.0%
! TGTTTTGTCCTTCAAGAAAA+GGG + chr5_4:16829882-16829901 None:intergenic 30.0%
! ATGTTTTGTCCTTCAAGAAA+AGG + chr5_4:16829883-16829902 None:intergenic 30.0%
TTAGAATTCCAATGAAGAGT+AGG + chr5_4:16829961-16829980 None:intergenic 30.0%
ACTCTTCATTGGAATTCTAA+CGG - chr5_4:16829961-16829980 Msa0840940:CDS 30.0%
!!! CATTATGCTTTTTTTCTCTG+TGG - chr5_4:16830042-16830061 Msa0840940:CDS 30.0%
!!! GATTTTCAAGTCTACAGTAT+TGG - chr5_4:16830201-16830220 Msa0840940:CDS 30.0%
TGGTTCAAGAACTATTGCAT+TGG + chr5_4:16816992-16817011 None:intergenic 35.0%
TTTGGTGAGAAACTATCTTG+AGG - chr5_4:16817044-16817063 Msa0840940:CDS 35.0%
TTGGTGAGAAACTATCTTGA+GGG - chr5_4:16817045-16817064 Msa0840940:CDS 35.0%
ATGGAACAAGGTTAATGCTA+AGG - chr5_4:16817137-16817156 Msa0840940:CDS 35.0%
CCTTATATATCTCACACTCT+CGG - chr5_4:16817567-16817586 Msa0840940:intron 35.0%
GATCGCCATCATCTATTTAT+TGG - chr5_4:16817619-16817638 Msa0840940:intron 35.0%
! ATTTGATTTCTCATACCCGT+TGG - chr5_4:16817762-16817781 Msa0840940:intron 35.0%
ATGCATATGAGAATAGGGTA+TGG - chr5_4:16817805-16817824 Msa0840940:intron 35.0%
TGCATATGAGAATAGGGTAT+GGG - chr5_4:16817806-16817825 Msa0840940:intron 35.0%
ACAAGAGAAATGTTGCATGT+GGG + chr5_4:16817859-16817878 None:intergenic 35.0%
AACAAGAGAAATGTTGCATG+TGG + chr5_4:16817860-16817879 None:intergenic 35.0%
CGTGTATGCATATAAATTGC+GGG - chr5_4:16818315-16818334 Msa0840940:intron 35.0%
CACCCATACTAAATTTACCA+TGG - chr5_4:16818525-16818544 Msa0840940:CDS 35.0%
TTAGCATGTGCGTTAAAACT+TGG - chr5_4:16818552-16818571 Msa0840940:CDS 35.0%
! TTGAGATAAACTTTTTGCCC+AGG + chr5_4:16818761-16818780 None:intergenic 35.0%
TGCTGAAAAAGCTCTTTCAA+CGG - chr5_4:16818900-16818919 Msa0840940:CDS 35.0%
! TGAGTTGACTTTGATATTGC+CGG + chr5_4:16818938-16818957 None:intergenic 35.0%
TAGAATTAGAACAAACCAGG+AGG - chr5_4:16819201-16819220 Msa0840940:intron 35.0%
AAGGAAAGTAAAACAGAGAC+CGG - chr5_4:16819293-16819312 Msa0840940:intron 35.0%
CTAGGCTGTAGATAATCTTA+GGG - chr5_4:16819698-16819717 Msa0840940:intron 35.0%
TAGGCTGTAGATAATCTTAG+GGG - chr5_4:16819699-16819718 Msa0840940:intron 35.0%
!! TACATGTTAATTTGCAGGTG+TGG - chr5_4:16820099-16820118 Msa0840940:intron 35.0%
TATCGCTCTCAATAAACCTA+TGG + chr5_4:16820156-16820175 None:intergenic 35.0%
GGTTTATTGAGAGCGATAAT+TGG - chr5_4:16820158-16820177 Msa0840940:intron 35.0%
! TATGTTTTCCACGTCTTCAT+CGG - chr5_4:16820219-16820238 Msa0840940:intron 35.0%
TGAAGAAATTGGTGAAGGAA+GGG - chr5_4:16820290-16820309 Msa0840940:intron 35.0%
GTGAAAATGAAAGACAATCG+TGG - chr5_4:16820325-16820344 Msa0840940:intron 35.0%
AACAGGAATTTCACCATTGT+TGG + chr5_4:16820464-16820483 None:intergenic 35.0%
! AGACTCTGATTCTGATTTGT+GGG + chr5_4:16820769-16820788 None:intergenic 35.0%
! ATCCATATTTGTTGCCACTT+GGG + chr5_4:16820845-16820864 None:intergenic 35.0%
! AATCCATATTTGTTGCCACT+TGG + chr5_4:16820846-16820865 None:intergenic 35.0%
! CTAAAGTGTTTCCTATGAAC+CGG - chr5_4:16821174-16821193 Msa0840940:intron 35.0%
! AATATATCCAACCGGTTCAT+AGG + chr5_4:16821188-16821207 None:intergenic 35.0%
! AAGTTATGCCCTTTTCTTTC+AGG + chr5_4:16821266-16821285 None:intergenic 35.0%
TGCAAAAAATGCTGTTCTAC+CGG - chr5_4:16821304-16821323 Msa0840940:intron 35.0%
CAACTCAAAACATCTTACAC+TGG - chr5_4:16821332-16821351 Msa0840940:intron 35.0%
CAAAACATCTTACACTGGTA+CGG - chr5_4:16821337-16821356 Msa0840940:intron 35.0%
!! CTTTTCGTTTTAATCTCCAG+TGG + chr5_4:16821929-16821948 None:intergenic 35.0%
GTATATAGTCAAGGTGTGTT+TGG + chr5_4:16822134-16822153 None:intergenic 35.0%
TATACACCAAAAAGCTGAAG+GGG - chr5_4:16822149-16822168 Msa0840940:intron 35.0%
TCATGTGTTGGAACATGTAA+TGG + chr5_4:16822251-16822270 None:intergenic 35.0%
TTTATCTTACTACGATTGGG+AGG + chr5_4:16822283-16822302 None:intergenic 35.0%
GCTCTTTATCTTACTACGAT+TGG + chr5_4:16822287-16822306 None:intergenic 35.0%
CAACAACATGTCAAACTAAG+AGG - chr5_4:16822430-16822449 Msa0840940:intron 35.0%
!! AGGGTTAAATTTTGGGAAGA+GGG + chr5_4:16822469-16822488 None:intergenic 35.0%
!! TAGGGTTAAATTTTGGGAAG+AGG + chr5_4:16822470-16822489 None:intergenic 35.0%
AAAGAGTTCATGTGGTTCAA+CGG + chr5_4:16822584-16822603 None:intergenic 35.0%
! GCATTGATAAATGAGCTTAG+TGG + chr5_4:16822652-16822671 None:intergenic 35.0%
! AATTGCCCACCAATTTTCAA+AGG + chr5_4:16827275-16827294 None:intergenic 35.0%
!!! GACACATGGCTGTTTTTTAT+TGG + chr5_4:16822926-16822945 None:intergenic 35.0%
TGGAGAGTGATTAGATTGAA+AGG + chr5_4:16823075-16823094 None:intergenic 35.0%
! ATATGATAGGAGTGTATGTG+TGG + chr5_4:16823230-16823249 None:intergenic 35.0%
TTCAACCAAGACATTCACTA+AGG - chr5_4:16824056-16824075 Msa0840940:intron 35.0%
TAATTTCACTAGCGGAAAGA+CGG - chr5_4:16824180-16824199 Msa0840940:intron 35.0%
! GCTCAAAAGAGACTATTTTC+TGG - chr5_4:16824278-16824297 Msa0840940:intron 35.0%
! GTTGCACGATATATTTTGTG+TGG - chr5_4:16824713-16824732 Msa0840940:intron 35.0%
AGAAAAAGTCAGCTCAAAAG+AGG - chr5_4:16824267-16824286 Msa0840940:intron 35.0%
AGAAACCTAGTCAAAATGGA+AGG - chr5_4:16825322-16825341 Msa0840940:intron 35.0%
ACCGTTGAATATGACCTTAT+TGG - chr5_4:16825406-16825425 Msa0840940:intron 35.0%
AATGCCCTTCCATGTTAATT+AGG + chr5_4:16825513-16825532 None:intergenic 35.0%
! ATGTTGGCTAGGTTTCTAAT+TGG + chr5_4:16825685-16825704 None:intergenic 35.0%
AGAAATCTAGTCAACATGGA+AGG - chr5_4:16825871-16825890 Msa0840940:intron 35.0%
! TTGAAAAGATTTAGGGTTCG+GGG - chr5_4:16826148-16826167 Msa0840940:intron 35.0%
!! TACGTGATTTTGATCCTTCA+CGG + chr5_4:16826373-16826392 None:intergenic 35.0%
AGGATCAAAATCACGTAGTT+CGG - chr5_4:16826376-16826395 Msa0840940:CDS 35.0%
GACCACTTGATTGAAAATCA+AGG - chr5_4:16826571-16826590 Msa0840940:intron 35.0%
! GCAATAAAAATAAAAGCGCG+TGG - chr5_4:16826669-16826688 Msa0840940:CDS 35.0%
! TGGATTTTTGTAGTGACGTT+GGG - chr5_4:16826689-16826708 Msa0840940:CDS 35.0%
! AATTGCCCACCAATTTTCAA+AGG - chr5_4:16827275-16827294 Msa0840940:intron 35.0%
! TCTCTCTTTCTTCTTTAGGA+AGG - chr5_4:16827407-16827426 Msa0840940:intron 35.0%
! TCTTCTTTAGGAAGGATCTT+TGG - chr5_4:16827415-16827434 Msa0840940:intron 35.0%
AACCACATCCACAAATATCA+GGG - chr5_4:16827511-16827530 Msa0840940:intron 35.0%
AGGGAAAATACACAATGTGT+TGG - chr5_4:16827530-16827549 Msa0840940:intron 35.0%
! AATACACAATGTGTTGGTCT+TGG - chr5_4:16827536-16827555 Msa0840940:intron 35.0%
TGTGTGAGAAAAATAATGGC+GGG + chr5_4:16827604-16827623 None:intergenic 35.0%
GTGTGTGAGAAAAATAATGG+CGG + chr5_4:16827605-16827624 None:intergenic 35.0%
GGAATTCACGAGATTTAATC+CGG - chr5_4:16828078-16828097 Msa0840940:intron 35.0%
GCAACATACTTGATATGTTG+GGG + chr5_4:16828104-16828123 None:intergenic 35.0%
ATGTTAAAAGCAGCTAAGCA+TGG - chr5_4:16828405-16828424 Msa0840940:intron 35.0%
TGTTAAAAGCAGCTAAGCAT+GGG - chr5_4:16828406-16828425 Msa0840940:intron 35.0%
! GTTGGAAGACTTCTTTTCTA+CGG + chr5_4:16828530-16828549 None:intergenic 35.0%
TTGCATCTTGCTGGAAATTT+AGG - chr5_4:16828624-16828643 Msa0840940:intron 35.0%
TGCATCTTGCTGGAAATTTA+GGG - chr5_4:16828625-16828644 Msa0840940:intron 35.0%
! ATTTTTGTGTGCATGTGCAA+TGG + chr5_4:16828758-16828777 None:intergenic 35.0%
TTGCACATGCACACAAAAAT+AGG - chr5_4:16828758-16828777 Msa0840940:intron 35.0%
TGCACATGCACACAAAAATA+GGG - chr5_4:16828759-16828778 Msa0840940:intron 35.0%
! AGTCTTATACGTGCTTTACT+AGG - chr5_4:16828789-16828808 Msa0840940:intron 35.0%
TATATAAGATCTGCTTGCAG+TGG - chr5_4:16828815-16828834 Msa0840940:intron 35.0%
AAATGAATAAGATCCTCCCT+TGG - chr5_4:16828996-16829015 Msa0840940:intron 35.0%
AACGGCTAGTGATATTTCAT+TGG + chr5_4:16829301-16829320 None:intergenic 35.0%
AAATGGATGATTGAAGGAAG+TGG - chr5_4:16829637-16829656 Msa0840940:intron 35.0%
!!! TTTTTGGCTTCCTTACACTT+GGG + chr5_4:16829677-16829696 None:intergenic 35.0%
!!! ATTTTTGGCTTCCTTACACT+TGG + chr5_4:16829678-16829697 None:intergenic 35.0%
CTTTCAGTAAATATCTCACG+AGG + chr5_4:16829716-16829735 None:intergenic 35.0%
GATATTTACTGAAAGCCACA+AGG - chr5_4:16829721-16829740 Msa0840940:intron 35.0%
TAGTGAAAGCAGGAGAAAAA+TGG - chr5_4:16829747-16829766 Msa0840940:intron 35.0%
AGTGAAAGCAGGAGAAAAAT+GGG - chr5_4:16829748-16829767 Msa0840940:intron 35.0%
! GTTTTGTCCTTCAAGAAAAG+GGG + chr5_4:16829881-16829900 None:intergenic 35.0%
ACTTCAATCCTACTCTTCAT+TGG - chr5_4:16829950-16829969 Msa0840940:CDS 35.0%
AGTGCGAAAAGTAACTTAAG+CGG + chr5_4:16830022-16830041 None:intergenic 35.0%
!! TTCACTTGCTATGCTCTTAA+AGG - chr5_4:16830090-16830109 Msa0840940:CDS 35.0%
!! TCACTTGCTATGCTCTTAAA+GGG - chr5_4:16830091-16830110 Msa0840940:CDS 35.0%
!! GAAGGTACTAGAACAATAAC+TGG + chr5_4:16830160-16830179 None:intergenic 35.0%
TTACGATAACTGGAGCTGTT+TGG - chr5_4:16817026-16817045 Msa0840940:CDS 40.0%
TGGTGAGAAACTATCTTGAG+GGG - chr5_4:16817046-16817065 Msa0840940:CDS 40.0%
!! TTCTGTTTCTAAAATGGGCG+TGG - chr5_4:16817092-16817111 Msa0840940:CDS 40.0%
!! TCTGTTTCTAAAATGGGCGT+GGG - chr5_4:16817093-16817112 Msa0840940:CDS 40.0%
CTAAAGAAGAGGTTGAAGCA+TGG - chr5_4:16817118-16817137 Msa0840940:CDS 40.0%
TGCATACTGCTAAAGATGCT+TGG - chr5_4:16817217-16817236 Msa0840940:CDS 40.0%
! CCGAGAGTGTGAGATATATA+AGG + chr5_4:16817570-16817589 None:intergenic 40.0%
ATAAAGGAATGAGGATGGGA+TGG - chr5_4:16817707-16817726 Msa0840940:intron 40.0%
TAAAGGAATGAGGATGGGAT+GGG - chr5_4:16817708-16817727 Msa0840940:intron 40.0%
TTCTCATACCCGTTGGATAT+AGG - chr5_4:16817769-16817788 Msa0840940:intron 40.0%
TCATATGCATACCCGTTAAC+CGG + chr5_4:16817795-16817814 None:intergenic 40.0%
ACGGGTATGCATATGAGAAT+AGG - chr5_4:16817799-16817818 Msa0840940:intron 40.0%
CGGGTATGCATATGAGAATA+GGG - chr5_4:16817800-16817819 Msa0840940:intron 40.0%
GCATATGAGAATAGGGTATG+GGG - chr5_4:16817807-16817826 Msa0840940:intron 40.0%
CAAGAGAAATGTTGCATGTG+GGG + chr5_4:16817858-16817877 None:intergenic 40.0%
! GGGGTCAACAAAGTATCAAT+CGG + chr5_4:16817944-16817963 None:intergenic 40.0%
CGTGTTCCACCAAATTTACA+CGG - chr5_4:16818176-16818195 Msa0840940:intron 40.0%
ATGGATCCGTGTAAATTTGG+TGG + chr5_4:16818185-16818204 None:intergenic 40.0%
CACATGGATCCGTGTAAATT+TGG + chr5_4:16818188-16818207 None:intergenic 40.0%
TTACACGGATCCATGTGATT+TGG - chr5_4:16818191-16818210 Msa0840940:intron 40.0%
ATAATCCCCACCAAATCACA+TGG + chr5_4:16818204-16818223 None:intergenic 40.0%
ACGCACATGCTAAATATCCA+TGG + chr5_4:16818545-16818564 None:intergenic 40.0%
! CCAGGAATTTTATAGAGCCT+GGG - chr5_4:16818741-16818760 Msa0840940:CDS 40.0%
GAGAGGAGAAGGAATGAAAA+TGG - chr5_4:16819230-16819249 Msa0840940:intron 40.0%
AGGAGAAGGAATGAAAATGG+AGG - chr5_4:16819233-16819252 Msa0840940:intron 40.0%
AGGAAAGTAAAACAGAGACC+GGG - chr5_4:16819294-16819313 Msa0840940:intron 40.0%
GTCGCTTGTAGTTGTAGAAA+AGG - chr5_4:16819332-16819351 Msa0840940:intron 40.0%
ATGAAGTGAGCAGAAGAAGA+TGG + chr5_4:16819585-16819604 None:intergenic 40.0%
AGATTATCTACAGCCTAGGA+TGG + chr5_4:16819696-16819715 None:intergenic 40.0%
CCTAAGATTATCTACAGCCT+AGG + chr5_4:16819700-16819719 None:intergenic 40.0%
CCTAGGCTGTAGATAATCTT+AGG - chr5_4:16819697-16819716 Msa0840940:intron 40.0%
TAGAAACAGATGGCGATCAT+AGG + chr5_4:16819727-16819746 None:intergenic 40.0%
TATGGAGTGGTCTATAGTGA+TGG + chr5_4:16820138-16820157 None:intergenic 40.0%
ATCACTATAGACCACTCCAT+AGG - chr5_4:16820137-16820156 Msa0840940:intron 40.0%
CTCTCAATAAACCTATGGAG+TGG + chr5_4:16820151-16820170 None:intergenic 40.0%
! ATGTTTTCCACGTCTTCATC+GGG - chr5_4:16820220-16820239 Msa0840940:intron 40.0%
GTGAAGAAATTGGTGAAGGA+AGG - chr5_4:16820289-16820308 Msa0840940:intron 40.0%
! TACCATACACTTTGCCACTT+TGG + chr5_4:16820392-16820411 None:intergenic 40.0%
TGTATGGTAGAAAAGAAGGG+AGG - chr5_4:16820403-16820422 Msa0840940:intron 40.0%
GTATGGTAGAAAAGAAGGGA+GGG - chr5_4:16820404-16820423 Msa0840940:intron 40.0%
TTGTAAGTGGCGACATATCT+TGG - chr5_4:16820618-16820637 Msa0840940:intron 40.0%
! GATTCTGATTTGTGGGTAAG+TGG + chr5_4:16820762-16820781 None:intergenic 40.0%
! CAGACTCTGATTCTGATTTG+TGG + chr5_4:16820770-16820789 None:intergenic 40.0%
GAATCAGAGTCTGAATCAGA+TGG - chr5_4:16820777-16820796 Msa0840940:intron 40.0%
ATGCGTGCTAATGCGTATAA+GGG + chr5_4:16820810-16820829 None:intergenic 40.0%
TTCCCAAGTGGCAACAAATA+TGG - chr5_4:16820840-16820859 Msa0840940:intron 40.0%
GTAGGGACCAAAAATGAAGA+TGG + chr5_4:16821513-16821532 None:intergenic 40.0%
GTGGTATTTGCTTAAGACCT+TGG + chr5_4:16821910-16821929 None:intergenic 40.0%
AGGTCTTAAGCAAATACCAC+TGG - chr5_4:16821910-16821929 Msa0840940:intron 40.0%
CAAACACCATCAAGACCAAT+AGG - chr5_4:16822038-16822057 Msa0840940:intron 40.0%
TACATGTTCCAACACATGAG+AGG - chr5_4:16822252-16822271 Msa0840940:intron 40.0%
! TGTTGAACCTTTGGTGGATA+GGG + chr5_4:16822355-16822374 None:intergenic 40.0%
! AGCCTATATGGCTATTTCGA+GGG + chr5_4:16822611-16822630 None:intergenic 40.0%
TCATCACTCCTATTATAGCG+AGG - chr5_4:16822675-16822694 Msa0840940:intron 40.0%
ATATATGTAAGGTGAGGCCT+AGG - chr5_4:16822866-16822885 Msa0840940:intron 40.0%
CAAGACATTCACTAAGGAAG+CGG - chr5_4:16824062-16824081 Msa0840940:intron 40.0%
AAGACATTCACTAAGGAAGC+GGG - chr5_4:16824063-16824082 Msa0840940:intron 40.0%
AATTTCACTAGCGGAAAGAC+GGG - chr5_4:16824181-16824200 Msa0840940:intron 40.0%
! CATATCAGTCCGCTCTTTTT+GGG - chr5_4:16824214-16824233 Msa0840940:intron 40.0%
TTCCAATGACCCAAAAAGAG+CGG + chr5_4:16824226-16824245 None:intergenic 40.0%
TTTGGGTCATTGGAAGTTGA+AGG - chr5_4:16824231-16824250 Msa0840940:intron 40.0%
GATTCTCCATGATGCCAATT+TGG - chr5_4:16824555-16824574 Msa0840940:intron 40.0%
GCATATCCAAATTGGCATCA+TGG + chr5_4:16824564-16824583 None:intergenic 40.0%
CAGCTCAAAAGAGGCAAAAT+AGG - chr5_4:16825049-16825068 Msa0840940:intron 40.0%
TTTGGAAACGAAGCAAGAAC+TGG - chr5_4:16825247-16825266 Msa0840940:intron 40.0%
AAACAGACACATCCGACAAA+TGG - chr5_4:16825363-16825382 Msa0840940:intron 40.0%
TTTGATACCGTTAGTCGGTT+GGG + chr5_4:16825556-16825575 None:intergenic 40.0%
ATTTGATACCGTTAGTCGGT+TGG + chr5_4:16825557-16825576 None:intergenic 40.0%
TTTGACACAGTTAGTCGGTT+GGG + chr5_4:16825739-16825758 None:intergenic 40.0%
ATTTGACACAGTTAGTCGGT+TGG + chr5_4:16825740-16825759 None:intergenic 40.0%
CATTTCTCCGACGATCAAAA+CGG - chr5_4:16825895-16825914 Msa0840940:intron 40.0%
! TGAAAAGATTTAGGGTTCGG+GGG - chr5_4:16826149-16826168 Msa0840940:intron 40.0%
!! TTCGGGGGTTGGTTATATTT+AGG - chr5_4:16826164-16826183 Msa0840940:intron 40.0%
!! TCGGGGGTTGGTTATATTTA+GGG - chr5_4:16826165-16826184 Msa0840940:intron 40.0%
!! GGGTTGGTTATATTTAGGGT+AGG - chr5_4:16826169-16826188 Msa0840940:intron 40.0%
!! ACGTGATTTTGATCCTTCAC+GGG + chr5_4:16826372-16826391 None:intergenic 40.0%
GGATCAAAATCACGTAGTTC+GGG - chr5_4:16826377-16826396 Msa0840940:CDS 40.0%
GATCAAAATCACGTAGTTCG+GGG - chr5_4:16826378-16826397 Msa0840940:CDS 40.0%
ACCAATTCTCATTTGCCACT+TGG + chr5_4:16826469-16826488 None:intergenic 40.0%
! GTGGATTTTTGTAGTGACGT+TGG - chr5_4:16826688-16826707 Msa0840940:CDS 40.0%
! CTTTAGGAAGGATCTTTGGA+TGG - chr5_4:16827419-16827438 Msa0840940:intron 40.0%
GAACCACATCCACAAATATC+AGG - chr5_4:16827510-16827529 Msa0840940:intron 40.0%
TTCCCTGATATTTGTGGATG+TGG + chr5_4:16827516-16827535 None:intergenic 40.0%
AACACAATATGTGCGATGAC+CGG + chr5_4:16827964-16827983 None:intergenic 40.0%
GGTCATCATAGAATTGGAGA+GGG + chr5_4:16828258-16828277 None:intergenic 40.0%
TGGTCATCATAGAATTGGAG+AGG + chr5_4:16828259-16828278 None:intergenic 40.0%
ATCGCTGGTCATCATAGAAT+TGG + chr5_4:16828264-16828283 None:intergenic 40.0%
TAAGGAATCTGAACTGAGAG+AGG - chr5_4:16828365-16828384 Msa0840940:intron 40.0%
CAATAGACCATAAGAGGTCA+GGG + chr5_4:16828467-16828486 None:intergenic 40.0%
TCAATAGACCATAAGAGGTC+AGG + chr5_4:16828468-16828487 None:intergenic 40.0%
CACTTGCATCATGTATGAGT+TGG + chr5_4:16828548-16828567 None:intergenic 40.0%
TGCAAGTGTAAATGGACGAA+AGG - chr5_4:16828560-16828579 Msa0840940:intron 40.0%
ATTTCCAGCAAGATGCAAGA+GGG + chr5_4:16828622-16828641 None:intergenic 40.0%
AATTTCCAGCAAGATGCAAG+AGG + chr5_4:16828623-16828642 None:intergenic 40.0%
AGATCTACGGTGAAGATCAA+AGG + chr5_4:16828655-16828674 None:intergenic 40.0%
TTTGATCTTCACCGTAGATC+TGG - chr5_4:16828654-16828673 Msa0840940:intron 40.0%
AAGTCAATACAAGCAGCCAA+GGG + chr5_4:16829015-16829034 None:intergenic 40.0%
!!! TTTTGGCTTCCTTACACTTG+GGG + chr5_4:16829676-16829695 None:intergenic 40.0%
AAATGGGCAAAAGATACAGC+TGG - chr5_4:16829764-16829783 Msa0840940:intron 40.0%
TGTCTTGATTGTTTCCACCA+GGG + chr5_4:16829850-16829869 None:intergenic 40.0%
! TGGAATTCCCCTTTTCTTGA+AGG - chr5_4:16829871-16829890 Msa0840940:intron 40.0%
GAAGAGTAGGATTGAAGTTG+AGG + chr5_4:16829948-16829967 None:intergenic 40.0%
ACTTAAGCGGCAAAGACATT+AGG + chr5_4:16830009-16830028 None:intergenic 40.0%
AGCACAAAAGGAAACCATCA+TGG + chr5_4:16830071-16830090 None:intergenic 40.0%
CATAGCAAGTGAAGCACAAA+AGG + chr5_4:16830083-16830102 None:intergenic 40.0%
ATGCTCTTAAAGGGACATGA+AGG - chr5_4:16830100-16830119 Msa0840940:CDS 40.0%
ATGAAGAGTCGCAATTGTGA+AGG + chr5_4:16830178-16830197 None:intergenic 40.0%
AGAGGTTGAAGCATGGAACA+AGG - chr5_4:16817125-16817144 Msa0840940:CDS 45.0%
CTCAGAATTGAAAGCCGAGT+CGG - chr5_4:16817263-16817282 Msa0840940:CDS 45.0%
! ATGATGGCGATCGATGACTA+TGG + chr5_4:16817611-16817630 None:intergenic 45.0%
AAAGGAATGAGGATGGGATG+GGG - chr5_4:16817709-16817728 Msa0840940:intron 45.0%
ATACCCAAACCCGTTGACAA+CGG - chr5_4:16817732-16817751 Msa0840940:intron 45.0%
AATTGCATCCCCGTTGTCAA+CGG + chr5_4:16817745-16817764 None:intergenic 45.0%
TTAACCGGCCTATATCCAAC+GGG + chr5_4:16817780-16817799 None:intergenic 45.0%
GTTAACCGGCCTATATCCAA+CGG + chr5_4:16817781-16817800 None:intergenic 45.0%
GTTGGATATAGGCCGGTTAA+CGG - chr5_4:16817780-16817799 Msa0840940:intron 45.0%
TTGGATATAGGCCGGTTAAC+GGG - chr5_4:16817781-16817800 Msa0840940:intron 45.0%
GAAATGTTGCATGTGGGGTA+GGG + chr5_4:16817853-16817872 None:intergenic 45.0%
AGAAATGTTGCATGTGGGGT+AGG + chr5_4:16817854-16817873 None:intergenic 45.0%
!! ACGGATCCATGTGATTTGGT+GGG - chr5_4:16818195-16818214 Msa0840940:intron 45.0%
AAATTGCGGGTCGCACTTAA+TGG - chr5_4:16818328-16818347 Msa0840940:intron 45.0%
! GCCAGGAATTTTATAGAGCC+TGG - chr5_4:16818740-16818759 Msa0840940:CDS 45.0%
CCCAGGCTCTATAAAATTCC+TGG + chr5_4:16818744-16818763 None:intergenic 45.0%
AGAGTTGAGAGAGGGGATTA+GGG - chr5_4:16819263-16819282 Msa0840940:intron 45.0%
! TAGGAAAAATGGCATTGGGC+TGG - chr5_4:16819411-16819430 Msa0840940:intron 45.0%
! AGGAAAAATGGCATTGGGCT+GGG - chr5_4:16819412-16819431 Msa0840940:intron 45.0%
ATACACACACACACACACAG+TGG + chr5_4:16819502-16819521 None:intergenic 45.0%
TCATGTATGCGAGTTACTCG+CGG - chr5_4:16819614-16819633 Msa0840940:intron 45.0%
CAGTGAGTTTCATCCATCCT+AGG - chr5_4:16819680-16819699 Msa0840940:intron 45.0%
CAACTCAGCAACAAGAGCTA+GGG + chr5_4:16820359-16820378 None:intergenic 45.0%
TCAACTCAGCAACAAGAGCT+AGG + chr5_4:16820360-16820379 None:intergenic 45.0%
GTTGACTGGAAACACCAAAG+TGG - chr5_4:16820375-16820394 Msa0840940:intron 45.0%
CACCAAAGTGGCAAAGTGTA+TGG - chr5_4:16820387-16820406 Msa0840940:intron 45.0%
TTAGCTGCAGCAAGAAGAAC+AGG + chr5_4:16820481-16820500 None:intergenic 45.0%
TGTTCTTCTTGCTGCAGCTA+AGG - chr5_4:16820480-16820499 Msa0840940:intron 45.0%
GTTCTTCTTGCTGCAGCTAA+GGG - chr5_4:16820481-16820500 Msa0840940:intron 45.0%
TTGTGGGTAAGTGGCAATTG+CGG + chr5_4:16820753-16820772 None:intergenic 45.0%
CATGCGTGCTAATGCGTATA+AGG + chr5_4:16820811-16820830 None:intergenic 45.0%
AGTGTTTCCTATGAACCGGT+TGG - chr5_4:16821178-16821197 Msa0840940:intron 45.0%
CTAAACTAGCCCACCCAAAT+TGG - chr5_4:16821841-16821860 Msa0840940:intron 45.0%
! ATTCTTCCCGGTGCCAATTT+GGG + chr5_4:16821857-16821876 None:intergenic 45.0%
GTCTTAGGTTCGATTCTTCC+CGG + chr5_4:16821869-16821888 None:intergenic 45.0%
GTGCTCATCATCAAGGTCTT+AGG + chr5_4:16821884-16821903 None:intergenic 45.0%
TTGGAGTGTGCTCATCATCA+AGG + chr5_4:16821891-16821910 None:intergenic 45.0%
!! TTGATGATGAGCACACTCCA+AGG - chr5_4:16821890-16821909 Msa0840940:intron 45.0%
!! TCAGGACCTATTGGTCTTGA+TGG + chr5_4:16822047-16822066 None:intergenic 45.0%
CAGACACTCAGAAGTCAGAT+CGG - chr5_4:16822067-16822086 Msa0840940:intron 45.0%
CTTTGGGCATTCTCATCTCT+AGG + chr5_4:16822192-16822211 None:intergenic 45.0%
AGAGATGAGAATGCCCAAAG+AGG - chr5_4:16822192-16822211 Msa0840940:intron 45.0%
!! GAGTGTTGGCATACCTCTTT+GGG + chr5_4:16822208-16822227 None:intergenic 45.0%
!! TGAGTGTTGGCATACCTCTT+TGG + chr5_4:16822209-16822228 None:intergenic 45.0%
GAACATGTAATGGTCTGTGC+CGG + chr5_4:16822241-16822260 None:intergenic 45.0%
AACTTCTCCCTATCCACCAA+AGG - chr5_4:16822345-16822364 Msa0840940:intron 45.0%
! CTGTTGAACCTTTGGTGGAT+AGG + chr5_4:16822356-16822375 None:intergenic 45.0%
CTATCCACCAAAGGTTCAAC+AGG - chr5_4:16822354-16822373 Msa0840940:intron 45.0%
! GGTTGTTCGGGTGTTTTCTA+GGG + chr5_4:16822488-16822507 None:intergenic 45.0%
! GACAAGTCAAGTGGTTGGTA+TGG + chr5_4:16822527-16822546 None:intergenic 45.0%
!! TACCAACCACTTGACTTGTC+CGG - chr5_4:16822527-16822546 Msa0840940:intron 45.0%
! GTGTGTCTTTTGTGGGAATC+CGG + chr5_4:16822549-16822568 None:intergenic 45.0%
!! GGTTTCGGTGTGTCTTTTGT+GGG + chr5_4:16822556-16822575 None:intergenic 45.0%
!! TGGTTTCGGTGTGTCTTTTG+TGG + chr5_4:16822557-16822576 None:intergenic 45.0%
AGTTCATGTGGTTCAACGGA+CGG + chr5_4:16822580-16822599 None:intergenic 45.0%
! AGGGGTACAAAGAGTTCATG+TGG + chr5_4:16822592-16822611 None:intergenic 45.0%
ACCCCTCGAAATAGCCATAT+AGG - chr5_4:16822606-16822625 Msa0840940:intron 45.0%
! GCCTATATGGCTATTTCGAG+GGG + chr5_4:16822610-16822629 None:intergenic 45.0%
! CAGCCTATATGGCTATTTCG+AGG + chr5_4:16822612-16822631 None:intergenic 45.0%
TCACTCCTATTATAGCGAGG+AGG - chr5_4:16822678-16822697 Msa0840940:intron 45.0%
! CCAATTTTCAAAGGCAGCCT+AGG + chr5_4:16822886-16822905 None:intergenic 45.0%
! CCTAGGCTGCCTTTGAAAAT+TGG - chr5_4:16822883-16822902 Msa0840940:intron 45.0%
! AGGCTGCCTTTGAAAATTGG+TGG - chr5_4:16822886-16822905 Msa0840940:intron 45.0%
! GGCTGCCTTTGAAAATTGGT+GGG - chr5_4:16822887-16822906 Msa0840940:intron 45.0%
CGCTTCCTTAGTGAATGTCT+TGG + chr5_4:16824064-16824083 None:intergenic 45.0%
! GCATATCAGTCCGCTCTTTT+TGG - chr5_4:16824213-16824232 Msa0840940:intron 45.0%
GAATCGAACCTGAGACCTTA+AGG + chr5_4:16824540-16824559 None:intergenic 45.0%
! CGAAGCAGGAGCTGAAATTT+TGG - chr5_4:16825620-16825639 Msa0840940:intron 45.0%
!!! GTTGGGTCTGTTTTGATCGT+TGG + chr5_4:16825722-16825741 None:intergenic 45.0%
!!! GGTGTTGTCGCGTCATTTTT+CGG - chr5_4:16826023-16826042 Msa0840940:intron 45.0%
GCCAAGTGGCAAATGAGAAT+TGG - chr5_4:16826465-16826484 Msa0840940:intron 45.0%
ACACAATATGTGCGATGACC+GGG + chr5_4:16827963-16827982 None:intergenic 45.0%
! CGAAGCTTGATAGCATGAGT+GGG + chr5_4:16828010-16828029 None:intergenic 45.0%
CCACTCATGCTATCAAGCTT+CGG - chr5_4:16828008-16828027 Msa0840940:intron 45.0%
CATACTTGATATGTTGGGGC+CGG + chr5_4:16828100-16828119 None:intergenic 45.0%
AAGCTAACCCTGACCTCTTA+TGG - chr5_4:16828457-16828476 Msa0840940:intron 45.0%
CTACGGTGAAGATCAAAGGA+AGG + chr5_4:16828651-16828670 None:intergenic 45.0%
CAAGTCAATACAAGCAGCCA+AGG + chr5_4:16829016-16829035 None:intergenic 45.0%
GAAAGCTGCAGCAAACATGA+TGG + chr5_4:16829822-16829841 None:intergenic 45.0%
CTGTCTTGATTGTTTCCACC+AGG + chr5_4:16829851-16829870 None:intergenic 45.0%
GGTGGAAACAATCAAGACAG+TGG - chr5_4:16829851-16829870 Msa0840940:intron 45.0%
AACGGCACGTTATGCAGAAA+AGG - chr5_4:16829979-16829998 Msa0840940:CDS 45.0%
TTTCTCTGTGGTGTCCATGA+TGG - chr5_4:16830054-16830073 Msa0840940:CDS 45.0%
!! TTAAAAAAATTATTCAATAA+AGG - chr5_4:16817691-16817710 Msa0840940:intron 5.0%
!! CATAATATAAAATATTAATA+TGG + chr5_4:16818367-16818386 None:intergenic 5.0%
!!! AATATGAATTTTTATATTTT+TGG - chr5_4:16821598-16821617 Msa0840940:intron 5.0%
!!! AATAAATGTTATTTTTAAAA+TGG + chr5_4:16822951-16822970 None:intergenic 5.0%
!!! ATATTTTTTTACATATAAAA+AGG + chr5_4:16823676-16823695 None:intergenic 5.0%
!!! TTATTTTTTTTTAAATGATA+AGG - chr5_4:16824799-16824818 Msa0840940:intron 5.0%
!!! AATAAATGTTATTTTTATAA+TGG - chr5_4:16827219-16827238 Msa0840940:intron 5.0%
! ATCTTGAGGGGCATGATCTG+TGG - chr5_4:16817058-16817077 Msa0840940:CDS 50.0%
! TCTTGAGGGGCATGATCTGT+GGG - chr5_4:16817059-16817078 Msa0840940:CDS 50.0%
ACCTTGCTCAATGTCCGACT+CGG + chr5_4:16817280-16817299 None:intergenic 50.0%
GCGATCGATGACTATGGTGA+TGG + chr5_4:16817605-16817624 None:intergenic 50.0%
TACCCAAACCCGTTGACAAC+GGG - chr5_4:16817733-16817752 Msa0840940:intron 50.0%
ATTGCATCCCCGTTGTCAAC+GGG + chr5_4:16817744-16817763 None:intergenic 50.0%
CATACCCGTTGGATATAGGC+CGG - chr5_4:16817773-16817792 Msa0840940:intron 50.0%
! CGTGTGCTAAAGAGAGTGTG+TGG + chr5_4:16818115-16818134 None:intergenic 50.0%
! CACGGATCCATGTGATTTGG+TGG - chr5_4:16818194-16818213 Msa0840940:intron 50.0%
!! CGGATCCATGTGATTTGGTG+GGG - chr5_4:16818196-16818215 Msa0840940:intron 50.0%
CTCCTCACACTCAGCACTAT+CGG - chr5_4:16818288-16818307 Msa0840940:intron 50.0%
TCCTCACACTCAGCACTATC+GGG - chr5_4:16818289-16818308 Msa0840940:intron 50.0%
! ATATATACAGTGGCGGAGCC+AGG - chr5_4:16818723-16818742 Msa0840940:CDS 50.0%
AAACCAGGAGGAGAGTAGAG+AGG - chr5_4:16819213-16819232 Msa0840940:intron 50.0%
GCAGTCTGAGAGTTGAGAGA+GGG - chr5_4:16819255-16819274 Msa0840940:intron 50.0%
CAGTCTGAGAGTTGAGAGAG+GGG - chr5_4:16819256-16819275 Msa0840940:intron 50.0%
GAGAGTTGAGAGAGGGGATT+AGG - chr5_4:16819262-16819281 Msa0840940:intron 50.0%
AGGGGATTAGGGAGAAGCAA+AGG - chr5_4:16819274-16819293 Msa0840940:intron 50.0%
AGTAAAACAGAGACCGGGAG+AGG - chr5_4:16819299-16819318 Msa0840940:intron 50.0%
GTAAAACAGAGACCGGGAGA+GGG - chr5_4:16819300-16819319 Msa0840940:intron 50.0%
TTTCCACGTCTTCATCGGGA+AGG - chr5_4:16820224-16820243 Msa0840940:intron 50.0%
CTTCATGTTGCAGCGATTGC+TGG - chr5_4:16820253-16820272 Msa0840940:intron 50.0%
! GCTCTTGTTGCTGAGTTGAC+TGG - chr5_4:16820361-16820380 Msa0840940:intron 50.0%
ATGCCTTCTGTGTTCCCAAG+TGG - chr5_4:16820828-16820847 Msa0840940:intron 50.0%
! TTGCCACTTGGGAACACAGA+AGG + chr5_4:16820834-16820853 None:intergenic 50.0%
ATCTAGCGCTCGCAACAACA+AGG + chr5_4:16821056-16821075 None:intergenic 50.0%
! GATTCTTCCCGGTGCCAATT+TGG + chr5_4:16821858-16821877 None:intergenic 50.0%
GAGTGTCTGTCAGGACCTAT+TGG + chr5_4:16822056-16822075 None:intergenic 50.0%
CTGACTTCTGAGTGTCTGTC+AGG + chr5_4:16822065-16822084 None:intergenic 50.0%
ACCAAAAAGCTGAAGGGGAG+AGG - chr5_4:16822154-16822173 Msa0840940:intron 50.0%
CCAAAAAGCTGAAGGGGAGA+GGG - chr5_4:16822155-16822174 Msa0840940:intron 50.0%
GGTATGCCAACACTCACCAT+AGG - chr5_4:16822213-16822232 Msa0840940:intron 50.0%
CCAACACTCACCATAGGTAC+CGG - chr5_4:16822219-16822238 Msa0840940:intron 50.0%
TGCTCCTGTTGAACCTTTGG+TGG + chr5_4:16822361-16822380 None:intergenic 50.0%
CGATGCTCCTGTTGAACCTT+TGG + chr5_4:16822364-16822383 None:intergenic 50.0%
TGTCAAACTAAGAGGAGCCC+TGG - chr5_4:16822438-16822457 Msa0840940:intron 50.0%
TTGGGAAGAGGGTTAGACCA+GGG + chr5_4:16822458-16822477 None:intergenic 50.0%
TTTGGGAAGAGGGTTAGACC+AGG + chr5_4:16822459-16822478 None:intergenic 50.0%
! GGGTTGTTCGGGTGTTTTCT+AGG + chr5_4:16822489-16822508 None:intergenic 50.0%
TATGGTCTAGCCAGGTGGTT+GGG + chr5_4:16822509-16822528 None:intergenic 50.0%
ATCCGGACAAGTCAAGTGGT+TGG + chr5_4:16822532-16822551 None:intergenic 50.0%
CTAGGCCTCCTCGCTATAAT+AGG + chr5_4:16822686-16822705 None:intergenic 50.0%
TCACACCTGGGAATCGAACT+AGG - chr5_4:16823204-16823223 Msa0840940:intron 50.0%
TATTTGCATTGCGCTCGCTG+AGG - chr5_4:16823702-16823721 Msa0840940:intron 50.0%
!!! GTCCGCTCTTTTTGGGTCAT+TGG - chr5_4:16824221-16824240 Msa0840940:intron 50.0%
CATTGCTCCGACGATCAAAG+CGG - chr5_4:16825529-16825548 Msa0840940:intron 50.0%
!! GTTGGGTCCGTTTTGATCGT+CGG + chr5_4:16825905-16825924 None:intergenic 50.0%
!!! GTTGTCGCGTCATTTTTCGG+AGG - chr5_4:16826026-16826045 Msa0840940:intron 50.0%
! AAGATTTAGGGTTCGGGGGT+TGG - chr5_4:16826153-16826172 Msa0840940:intron 50.0%
TTGATCCTTCACGGGTACGT+AGG + chr5_4:16826364-16826383 None:intergenic 50.0%
TCAAGTTTGTGTGTGTGCCC+TGG - chr5_4:16827006-16827025 Msa0840940:CDS 50.0%
AATGACTATGGTGCGTGACC+CGG - chr5_4:16827942-16827961 Msa0840940:intron 50.0%
! CCGAAGCTTGATAGCATGAG+TGG + chr5_4:16828011-16828030 None:intergenic 50.0%
AACACCCTCTTGCATCTTGC+TGG - chr5_4:16828615-16828634 Msa0840940:intron 50.0%
! TCTCTTTGCATTTGGAGCGC+AGG + chr5_4:16828681-16828700 None:intergenic 50.0%
TCAATACAAGCAGCCAAGGG+AGG + chr5_4:16829012-16829031 None:intergenic 50.0%
AATCGTGCACCCCAAGTGTA+AGG - chr5_4:16829664-16829683 Msa0840940:intron 50.0%
CTGCTTTCACTAGCTCCTTG+TGG + chr5_4:16829739-16829758 None:intergenic 50.0%
CACAAGGAGCTAGTGAAAGC+AGG - chr5_4:16829737-16829756 Msa0840940:intron 50.0%
! CTTGAGGGGCATGATCTGTG+GGG - chr5_4:16817060-16817079 Msa0840940:CDS 55.0%
GGGCGTGGGATCTAAAGAAG+AGG - chr5_4:16817107-16817126 Msa0840940:CDS 55.0%
ACCCAAACCCGTTGACAACG+GGG - chr5_4:16817734-16817753 Msa0840940:intron 55.0%
! TCCCCGTTGTCAACGGGTTT+GGG + chr5_4:16817738-16817757 None:intergenic 55.0%
! ATCCCCGTTGTCAACGGGTT+TGG + chr5_4:16817739-16817758 None:intergenic 55.0%
GAGAATAGGGTATGGGGACG+AGG - chr5_4:16817813-16817832 Msa0840940:intron 55.0%
ATAGGGTATGGGGACGAGGA+AGG - chr5_4:16817817-16817836 Msa0840940:intron 55.0%
TGTTGCATGTGGGGTAGGGA+CGG + chr5_4:16817849-16817868 None:intergenic 55.0%
! ACCCGATAGTGCTGAGTGTG+AGG + chr5_4:16818293-16818312 None:intergenic 55.0%
TCAACGGAAGCTGTCGACAC+CGG - chr5_4:16818916-16818935 Msa0840940:intron 55.0%
TCTCCTCTCTACTCTCCTCC+TGG + chr5_4:16819219-16819238 None:intergenic 55.0%
GGAGGAGAGTAGAGAGGAGA+AGG - chr5_4:16819219-16819238 Msa0840940:intron 55.0%
GGCAGTCTGAGAGTTGAGAG+AGG - chr5_4:16819254-16819273 Msa0840940:intron 55.0%
AAGCAAGCAGCAGTAGAGCC+TGG - chr5_4:16819443-16819462 Msa0840940:intron 55.0%
AGCAAGCAGCAGTAGAGCCT+GGG - chr5_4:16819444-16819463 Msa0840940:intron 55.0%
ACTCCTTCCCGATGAAGACG+TGG + chr5_4:16820230-16820249 None:intergenic 55.0%
TAGCCCACCCAAATTGGCAC+CGG - chr5_4:16821847-16821866 Msa0840940:intron 55.0%
! TTCCCGGTGCCAATTTGGGT+GGG + chr5_4:16821853-16821872 None:intergenic 55.0%
! CCCTCTCCCCTTCAGCTTTT+TGG + chr5_4:16822158-16822177 None:intergenic 55.0%
CCGGTACCTATGGTGAGTGT+TGG + chr5_4:16822222-16822241 None:intergenic 55.0%
! ATGGTCTGTGCCGGTACCTA+TGG + chr5_4:16822232-16822251 None:intergenic 55.0%
AGGTGCAGCCTCTCATGTGT+TGG + chr5_4:16822263-16822282 None:intergenic 55.0%
! AGCCAGGTGGTTGGGTTGTT+CGG + chr5_4:16822501-16822520 None:intergenic 55.0%
GTATGGTCTAGCCAGGTGGT+TGG + chr5_4:16822510-16822529 None:intergenic 55.0%
GTTGGTATGGTCTAGCCAGG+TGG + chr5_4:16822514-16822533 None:intergenic 55.0%
! GTGGTTGGTATGGTCTAGCC+AGG + chr5_4:16822517-16822536 None:intergenic 55.0%
GGGAATCCGGACAAGTCAAG+TGG + chr5_4:16822536-16822555 None:intergenic 55.0%
GGTTCAACGGACGGTGGTTT+CGG + chr5_4:16822571-16822590 None:intergenic 55.0%
TCATGTGGTTCAACGGACGG+TGG + chr5_4:16822577-16822596 None:intergenic 55.0%
TGTGGCCTAGTTCGATTCCC+AGG + chr5_4:16823212-16823231 None:intergenic 55.0%
GGAAGCGGGAACCCTTCTAA+AGG - chr5_4:16824077-16824096 Msa0840940:intron 55.0%
GTTGGGTCCGCTTTGATCGT+CGG + chr5_4:16825539-16825558 None:intergenic 55.0%
AAGCGGACCCAACCGACTAA+CGG - chr5_4:16825546-16825565 Msa0840940:intron 55.0%
CTTCACGGGTACGTAGGCAA+AGG + chr5_4:16826358-16826377 None:intergenic 55.0%
CTTTGCCTACGTACCCGTGA+AGG - chr5_4:16826356-16826375 Msa0840940:CDS 55.0%
CAGACCTGGGAATCGAACCA+GGG + chr5_4:16827026-16827045 None:intergenic 55.0%
TCAGACCTGGGAATCGAACC+AGG + chr5_4:16827027-16827046 None:intergenic 55.0%
GCCGAGTCGGACATTGAGCA+AGG - chr5_4:16817276-16817295 Msa0840940:CDS 60.0%
GTTGCATGTGGGGTAGGGAC+GGG + chr5_4:16817848-16817867 None:intergenic 60.0%
ACACACACACACAGTGGCGC+AGG + chr5_4:16819496-16819515 None:intergenic 60.0%
AGCCCACCCAAATTGGCACC+GGG - chr5_4:16821848-16821867 Msa0840940:intron 60.0%
! CTTCCCGGTGCCAATTTGGG+TGG + chr5_4:16821854-16821873 None:intergenic 60.0%
AAGCTGAAGGGGAGAGGGAG+CGG - chr5_4:16822160-16822179 Msa0840940:intron 60.0%
ACCCGAACAACCCAACCACC+TGG - chr5_4:16822496-16822515 Msa0840940:intron 60.0%
! GCCAGGTGGTTGGGTTGTTC+GGG + chr5_4:16822500-16822519 None:intergenic 60.0%
AGCGGAAAGACGGGCACCAT+CGG - chr5_4:16824190-16824209 Msa0840940:intron 60.0%
!! GAGCGGACTGATATGCCCGA+TGG + chr5_4:16824209-16824228 None:intergenic 60.0%
! TGTGCCCTGGTTCGATTCCC+AGG - chr5_4:16827019-16827038 Msa0840940:CDS 60.0%
GGAGCGCAGGACCAGATCTA+CGG + chr5_4:16828668-16828687 None:intergenic 60.0%
GCTGCAGCTTTCACTGTCCC+TGG - chr5_4:16829830-16829849 Msa0840940:intron 60.0%
GCAGCTTTCACTGTCCCTGG+TGG - chr5_4:16829833-16829852 Msa0840940:intron 60.0%
ACAGAGACCGGGAGAGGGAG+AGG - chr5_4:16819305-16819324 Msa0840940:intron 65.0%
CAGAGACCGGGAGAGGGAGA+GGG - chr5_4:16819306-16819325 Msa0840940:intron 65.0%
GACTCTCCCTCTCCCTCTCC+CGG + chr5_4:16819315-16819334 None:intergenic 65.0%
GGCTACAGCCCAGCCTAGCT+GGG - chr5_4:16819465-16819484 Msa0840940:intron 65.0%
TACAGCCCAGCCTAGCTGGG+TGG - chr5_4:16819468-16819487 Msa0840940:intron 65.0%
AGGCACCACCCAGCTAGGCT+GGG + chr5_4:16819476-16819495 None:intergenic 65.0%
GCGGAAAGACGGGCACCATC+GGG - chr5_4:16824191-16824210 Msa0840940:intron 65.0%
GCTAGGCTGGGCTGTAGCCC+AGG + chr5_4:16819464-16819483 None:intergenic 70.0%
GGGCTACAGCCCAGCCTAGC+TGG - chr5_4:16819464-16819483 Msa0840940:intron 70.0%
CAGGCACCACCCAGCTAGGC+TGG + chr5_4:16819477-16819496 None:intergenic 70.0%
GGCGCAGGCACCACCCAGCT+AGG + chr5_4:16819481-16819500 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 16816973 16830231 16816973 ID=Msa0840940;Name=Msa0840940
chr5_4 mRNA 16816973 16830231 16816973 ID=Msa0840940-mRNA-1;Parent=Msa0840940;Name=Msa0840940-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.5|0.2|1|1|1|5|0|667
chr5_4 exon 16829907 16830231 16829907 ID=Msa0840940-mRNA-1:exon:7264;Parent=Msa0840940-mRNA-1
chr5_4 exon 16826585 16827079 16826585 ID=Msa0840940-mRNA-1:exon:7263;Parent=Msa0840940-mRNA-1
chr5_4 exon 16826316 16826483 16826316 ID=Msa0840940-mRNA-1:exon:7262;Parent=Msa0840940-mRNA-1
chr5_4 exon 16818488 16818924 16818488 ID=Msa0840940-mRNA-1:exon:7261;Parent=Msa0840940-mRNA-1
chr5_4 exon 16816973 16817551 16816973 ID=Msa0840940-mRNA-1:exon:7260;Parent=Msa0840940-mRNA-1
chr5_4 CDS 16829907 16830231 16829907 ID=Msa0840940-mRNA-1:cds;Parent=Msa0840940-mRNA-1
chr5_4 CDS 16826585 16827079 16826585 ID=Msa0840940-mRNA-1:cds;Parent=Msa0840940-mRNA-1
chr5_4 CDS 16826316 16826483 16826316 ID=Msa0840940-mRNA-1:cds;Parent=Msa0840940-mRNA-1
chr5_4 CDS 16818488 16818924 16818488 ID=Msa0840940-mRNA-1:cds;Parent=Msa0840940-mRNA-1
chr5_4 CDS 16816973 16817551 16816973 ID=Msa0840940-mRNA-1:cds;Parent=Msa0840940-mRNA-1
Gene Sequence

>Msa0840940

ATGGCAAGCATTTCAGCCAATGCAATAGTTCTTGAACCACTAACAAAAGACAATTACGATAACTGGAGCTGTTTGGTGAGAAACTATCTTGAGGGGCATGATCTGTGGGGAGTTGTGACTTCTGTTTCTAAAATGGGCGTGGGATCTAAAGAAGAGGTTGAAGCATGGAACAAGGTTAATGCTAAGGTTTTGCATATTATTCAACTAGCATGCGGATCAGAGAATCTTGCACATATTAGAGATTTGCATACTGCTAAAGATGCTTGGAATTATTTTAGTGCATTATACGGCTCAGAATTGAAAGCCGAGTCGGACATTGAGCAAGATGATAGTCTCCATCACTATAGACCACTCCATAGGTTTATTGAGAGCGATAATTGGAATGATGCAAAATTATTCATGAAAAGGGATGAAACATCTATGTTTTCCACGTCTTCATCGGGAAGGAGTATTCTTCATGTTGCAGCGATTGCTGGTCACGAAGAAATTGTGAAGAAATTGGTGAAGGAAGGGAAAGATAAGTTAGTGAAAATGAAAGACAATCGTGGATACACAGCCCTAGCTCTTGTTGCTGAGTTGACTGGAAACACCAAAGTGGCAAAGTGTATGGTAGAAAAGAAGGGAGGGCAAGTTGTTGACCATGACCTATTATCTATGAAGACCAACAATGGTGAAATTCCTGTTCTTCTTGCTGCAGCTAAGGGACACAAAGAAATGACTAGTTATCTTGTTCCTAAAACTCATTTGGAAGAAATGACAGATAAAGATTTTCACAATGGTGTTTTGCTTCTAACGCGATGTATTAATGCAGAAATATTTTGTGTGGCTTTGAGTTTACTTCAACGATTTCCGCAATTGCCACTTACCCACAAATCAGAATCAGAGTCTGAATCAGATGGCGTGCAACCCTTATACGCATTAGCACGCATGCCTTCTGTGTTCCCAAGTGGCAACAAATATGGATTCATAAGAAGATTTATTTATAAAACGATAAAAGAAATATACGATCAGAAAATGACGCATCGTCTAGTGCTTGAAATATTGAATTGCTTGTCCCAAAAAATTCAAGAATTTAAGGAATCTGAACTGAGAGAGGCTTCAGCATACGATGCAATGTTAAAAGCAGCTAAGCATGGGAATATTGAGTTCATAGTTGCAATGAGAAAAGCTAACCCTGACCTCTTATGGTCTATTGATAAAAATAAAAGAGGCATATTTTCGCATGCAATTTTGAACCGTAGAAAAGAAGTCTTCCAACTCATACATGATGCAAGTGTAAATGGACGAAAGGAAATTGTTAGATGTCGTGTAGATGCATTTGATAACACCCTCTTGCATCTTGCTGGAAATTTAGGGCCTTCCTTTGATCTTCACCGTAGATCTGGTCCTGCGCTCCAAATGCAAAGAGAGATTTTATGGTTTCAGGAAGTGGAGAAAATCGTGCACCCCAAGTGTAAGGAAGCCAAAAATGTAGAAGATAAGAAGCCTCGTGAGATATTTACTGAAAGCCACAAGGAGCTAGTGAAAGCAGGAGAAAAATGGGCAAAAGATACAGCTGGTTCATTTACACTTGTTGCTACACTCATCACAACCATCATGTTTGCTGCAGCTTTCACTGTCCCTGGTGGAAACAATCAAGACAGTGGAATTCCCCTTTTCTTGAAGGACAAAACATTTAATGTGTTTATAATAGCAGATGCAATATCTCTTTTCACTTCCTCAACTTCAATCCTACTCTTCATTGGAATTCTAACGGCACGTTATGCAGAAAAGGATTTCCTAATGTCTTTGCCGCTTAAGTTACTTTTCGCACTCATTATGCTTTTTTTCTCTGTGGTGTCCATGATGGTTTCCTTTTGTGCTTCACTTGCTATGCTCTTAAAGGGACATGAAGGAGTCATAATAACAGCTATGTCGTTCGCAAGTATTCCAGTTATTGTTCTAGTACCTTCACAATTGCGACTCTTCATTGAGATTTTCAAGTCTACAGTATTGGCCAAATGA
Protein sequence

>Msa0840940

MASISANAIVLEPLTKDNYDNWSCLVRNYLEGHDLWGVVTSVSKMGVGSKEEVEAWNKVNAKVLHIIQLACGSENLAHIRDLHTAKDAWNYFSALYGSELKAESDIEQDDSLHHYRPLHRFIESDNWNDAKLFMKRDETSMFSTSSSGRSILHVAAIAGHEEIVKKLVKEGKDKLVKMKDNRGYTALALVAELTGNTKVAKCMVEKKGGQVVDHDLLSMKTNNGEIPVLLAAAKGHKEMTSYLVPKTHLEEMTDKDFHNGVLLLTRCINAEIFCVALSLLQRFPQLPLTHKSESESESDGVQPLYALARMPSVFPSGNKYGFIRRFIYKTIKEIYDQKMTHRLVLEILNCLSQKIQEFKESELREASAYDAMLKAAKHGNIEFIVAMRKANPDLLWSIDKNKRGIFSHAILNRRKEVFQLIHDASVNGRKEIVRCRVDAFDNTLLHLAGNLGPSFDLHRRSGPALQMQREILWFQEVEKIVHPKCKEAKNVEDKKPREIFTESHKELVKAGEKWAKDTAGSFTLVATLITTIMFAAAFTVPGGNNQDSGIPLFLKDKTFNVFIIADAISLFTSSTSILLFIGILTARYAEKDFLMSLPLKLLFALIMLFFSVVSMMVSFCASLAMLLKGHEGVIITAMSFASIPVIVLVPSQLRLFIEIFKSTVLAK*