AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0842690

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0842690 MtrunA17_Chr5g0413271 94.929 493 16 2 1 491 1 486 0.0 973
Msa0842690 MtrunA17_Chr8g0368461 61.798 534 154 8 6 490 5 537 0.0 625
Msa0842690 MtrunA17_Chr1g0175671 52.750 400 185 2 87 482 111 510 1.73e-156 455
Msa0842690 MtrunA17_Chr7g0258851 58.772 342 140 1 142 482 247 588 8.00e-154 451
Msa0842690 MtrunA17_Chr1g0213281 54.294 361 160 3 136 491 168 528 1.02e-146 430
Msa0842690 MtrunA17_Chr4g0068111 55.102 343 149 3 143 482 114 454 4.54e-146 426
Msa0842690 MtrunA17_Chr4g0071391 49.271 343 171 2 141 482 107 447 5.46e-134 395
Msa0842690 MtrunA17_Chr7g0269991 42.478 452 226 10 53 487 38 472 7.32e-122 365
Msa0842690 MtrunA17_Chr2g0287901 41.927 384 202 6 113 483 64 439 7.32e-103 315
Msa0842690 MtrunA17_Chr7g0259711 42.737 358 178 5 141 483 89 434 2.75e-100 308
Msa0842690 MtrunA17_Chr5g0430371 38.592 355 191 5 143 482 58 400 1.47e-94 292
Msa0842690 MtrunA17_Chr3g0105301 37.500 352 191 6 143 482 43 377 1.65e-91 283
Msa0842690 MtrunA17_Chr2g0283581 38.192 343 182 7 143 481 42 358 2.01e-86 270
Msa0842690 MtrunA17_Chr1g0210771 38.776 343 191 8 141 481 57 382 3.61e-85 267
Msa0842690 MtrunA17_Chr1g0171171 38.123 341 195 5 141 481 51 375 7.37e-85 266
Msa0842690 MtrunA17_Chr5g0413851 39.093 353 188 8 135 484 34 362 4.44e-84 264
Msa0842690 MtrunA17_Chr3g0126021 36.785 367 210 6 129 488 115 466 1.09e-82 263
Msa0842690 MtrunA17_Chr2g0325481 36.127 346 197 5 138 482 45 367 7.81e-82 258
Msa0842690 MtrunA17_Chr4g0045951 36.950 341 192 6 143 482 45 363 1.94e-81 257
Msa0842690 MtrunA17_Chr4g0045941 36.919 344 188 6 143 482 33 351 2.80e-80 253
Msa0842690 MtrunA17_Chr3g0097891 38.150 346 183 9 143 482 31 351 9.33e-80 252
Msa0842690 MtrunA17_Chr4g0005491 37.183 355 202 8 142 482 61 408 3.51e-79 253
Msa0842690 MtrunA17_Chr8g0384151 36.337 344 203 4 141 482 88 417 1.16e-78 252
Msa0842690 MtrunA17_Chr4g0006991 36.944 360 205 9 136 481 76 427 5.98e-78 250
Msa0842690 MtrunA17_Chr7g0243301 36.212 359 212 7 136 482 57 410 3.47e-77 248
Msa0842690 MtrunA17_Chr2g0314801 35.942 345 197 7 137 478 27 350 7.74e-77 244
Msa0842690 MtrunA17_Chr4g0041011 33.146 356 214 5 127 481 31 363 1.05e-75 242
Msa0842690 MtrunA17_Chr3g0113671 37.709 358 196 9 141 482 104 450 1.75e-75 244
Msa0842690 MtrunA17_Chr2g0314791 36.080 352 191 10 139 484 25 348 2.56e-75 241
Msa0842690 MtrunA17_Chr5g0437601 36.212 359 206 9 137 482 77 425 1.33e-73 239
Msa0842690 MtrunA17_Chr3g0085071 34.111 343 201 6 141 481 44 363 3.12e-73 236
Msa0842690 MtrunA17_Chr8g0360521 34.417 369 206 9 134 484 62 412 1.37e-72 236
Msa0842690 MtrunA17_Chr7g0242701 38.017 363 197 11 136 481 76 427 3.47e-71 232
Msa0842690 MtrunA17_Chr3g0114101 34.085 355 207 9 143 482 89 431 3.67e-71 232
Msa0842690 MtrunA17_Chr3g0085081 33.528 343 203 5 141 481 29 348 6.67e-71 229
Msa0842690 MtrunA17_Chr5g0437291 35.028 354 210 8 143 482 165 512 2.30e-69 230
Msa0842690 MtrunA17_Chr3g0091031 32.362 343 207 5 141 481 29 348 2.99e-69 225
Msa0842690 MtrunA17_Chr4g0005481 35.817 349 202 9 141 478 106 443 9.95e-68 224
Msa0842690 MtrunA17_Chr1g0178081 34.054 370 176 7 126 487 38 347 2.45e-65 215
Msa0842690 MtrunA17_Chr1g0188191 30.829 386 229 10 129 487 213 587 5.28e-51 182
Msa0842690 MtrunA17_Chr6g0476041 29.494 356 220 9 143 478 167 511 3.78e-50 179
Msa0842690 MtrunA17_Chr8g0347321 29.248 359 224 11 142 482 94 440 3.85e-50 177
Msa0842690 MtrunA17_Chr1g0209921 36.100 241 133 6 141 376 42 266 3.98e-49 169
Msa0842690 MtrunA17_Chr8g0391481 31.536 371 212 14 140 486 24 376 1.14e-47 169
Msa0842690 MtrunA17_Chr7g0226991 28.906 384 237 11 123 486 39 406 2.11e-46 166
Msa0842690 MtrunA17_Chr4g0049421 30.518 367 216 14 143 487 48 397 2.67e-44 160
Msa0842690 MtrunA17_Chr8g0387921 29.670 364 222 13 142 485 73 422 3.82e-44 160
Msa0842690 MtrunA17_Chr6g0456691 29.167 360 216 9 143 481 78 419 6.25e-44 160
Msa0842690 MtrunA17_Chr3g0140371 29.365 378 218 14 135 486 10 364 9.96e-44 158
Msa0842690 MtrunA17_Chr6g0456681 30.028 363 212 12 143 481 64 408 2.47e-43 158
Msa0842690 MtrunA17_Chr2g0283851 29.223 373 209 12 144 485 56 404 2.09e-41 152
Msa0842690 MtrunA17_Chr5g0414051 29.111 371 221 13 138 483 69 422 9.61e-41 151
Msa0842690 MtrunA17_Chr6g0455901 27.614 373 213 15 141 481 69 416 5.03e-40 149
Msa0842690 MtrunA17_Chr5g0414061 28.571 364 222 13 142 483 93 440 3.93e-39 147
Msa0842690 MtrunA17_Chr5g0414091 28.571 357 225 12 140 477 82 427 7.27e-39 146
Msa0842690 MtrunA17_Chr6g0451321 26.854 391 251 13 114 485 87 461 4.96e-37 142
Msa0842690 MtrunA17_Chr8g0384421 26.776 366 239 12 131 481 121 472 5.75e-37 142
Msa0842690 MtrunA17_Chr5g0414041 27.586 377 226 12 135 483 78 435 2.12e-36 139
Msa0842690 MtrunA17_Chr4g0070341 26.346 353 237 9 141 481 130 471 8.12e-35 135
Msa0842690 MtrunA17_Chr2g0287931 41.732 127 68 2 203 325 2 126 2.55e-30 114
Msa0842690 MtrunA17_Chr7g0221291 51.613 93 45 0 141 233 77 169 2.56e-30 115
Msa0842690 MtrunA17_Chr7g0221271 50.538 93 46 0 141 233 77 169 1.56e-28 112
Msa0842690 MtrunA17_Chr3g0085101 36.893 103 63 1 342 442 4 106 1.40e-19 84.3
Msa0842690 MtrunA17_Chr7g0221281 26.749 243 154 9 260 485 5 240 2.74e-15 75.9
Msa0842690 MtrunA17_Chr1g0209931 46.479 71 29 2 414 484 34 95 1.28e-13 67.0
Msa0842690 MtrunA17_Chr5g0414081 26.633 199 117 6 307 483 10 201 1.30e-12 67.0
Msa0842690 MtrunA17_Chr5g0429191 53.333 45 20 1 430 474 2 45 1.39e-11 59.3
Msa0842690 MtrunA17_Chr2g0287911 48.148 54 21 1 143 196 61 107 9.74e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0842690 AT1G60790.1 56.481 540 176 10 1 485 1 536 0.0 585
Msa0842690 AT5G06700.1 58.065 341 142 1 143 482 255 595 1.40e-154 453
Msa0842690 AT3G12060.1 57.185 341 145 1 143 482 196 536 2.71e-149 438
Msa0842690 AT5G49340.1 56.268 343 147 3 143 482 100 442 2.36e-143 419
Msa0842690 AT5G20590.1 52.187 343 158 4 143 482 141 480 1.50e-138 408
Msa0842690 AT3G62390.1 48.433 351 176 2 132 482 127 472 6.17e-123 368
Msa0842690 AT5G19160.1 45.333 375 183 6 126 484 79 447 1.13e-109 333
Msa0842690 AT3G06080.2 45.299 351 178 6 143 484 103 448 7.44e-103 316
Msa0842690 AT5G20590.2 52.521 238 111 2 143 378 141 378 3.65e-93 288
Msa0842690 AT5G06230.2 40.000 370 200 5 124 482 7 365 8.55e-92 284
Msa0842690 AT5G06230.1 40.000 370 200 5 124 482 48 406 3.35e-91 284
Msa0842690 AT3G11570.1 41.590 327 174 4 164 482 103 420 3.47e-90 282
Msa0842690 AT1G29050.1 37.941 340 188 4 143 481 61 378 5.78e-88 275
Msa0842690 AT5G58600.1 37.644 348 197 8 143 482 66 401 6.30e-87 273
Msa0842690 AT3G62390.2 38.701 385 215 6 13 386 7 381 3.23e-86 271
Msa0842690 AT1G78710.1 37.326 359 198 10 128 482 22 357 1.39e-84 265
Msa0842690 AT2G34070.1 35.393 356 206 5 128 481 50 383 2.40e-84 265
Msa0842690 AT1G48880.1 37.069 348 197 5 140 483 112 441 1.11e-82 263
Msa0842690 AT2G30900.1 37.861 346 187 8 143 482 43 366 6.74e-81 256
Msa0842690 AT2G31110.2 36.070 341 195 6 142 481 44 362 7.02e-81 256
Msa0842690 AT5G19160.2 47.692 260 127 3 126 378 79 336 4.28e-80 253
Msa0842690 AT2G42570.1 33.983 359 214 5 125 482 29 365 7.94e-80 253
Msa0842690 AT2G40320.1 36.872 358 205 8 137 482 75 423 3.43e-79 253
Msa0842690 AT1G73140.1 35.537 363 214 9 134 486 58 410 5.80e-79 253
Msa0842690 AT2G30010.1 36.158 354 200 8 143 482 56 397 2.07e-78 251
Msa0842690 AT2G30010.2 36.158 354 200 8 143 482 99 440 6.08e-78 251
Msa0842690 AT3G54260.1 35.549 346 202 7 143 485 51 378 6.09e-77 246
Msa0842690 AT3G11030.1 35.854 357 211 8 137 482 100 449 4.09e-76 246
Msa0842690 AT5G01360.2 36.188 362 210 8 134 481 24 378 9.05e-75 240
Msa0842690 AT5G01360.1 36.712 365 204 9 134 481 80 434 2.70e-74 241
Msa0842690 AT3G06080.1 47.059 238 124 2 143 378 103 340 1.37e-73 236
Msa0842690 AT5G01620.2 35.775 355 207 8 138 481 105 449 2.05e-72 236
Msa0842690 AT5G01620.1 35.775 355 207 8 138 481 105 449 2.05e-72 236
Msa0842690 AT5G01620.3 35.775 355 207 8 138 481 113 457 2.64e-72 236
Msa0842690 AT3G14850.2 32.941 340 206 5 141 478 32 351 1.08e-71 232
Msa0842690 AT2G40160.2 34.232 371 210 9 135 482 65 424 3.23e-70 231
Msa0842690 AT3G55990.1 31.729 457 266 13 49 482 51 484 6.29e-70 231
Msa0842690 AT2G40160.1 34.153 366 207 9 135 477 65 419 6.59e-70 229
Msa0842690 AT2G38320.1 33.702 362 219 8 135 482 51 405 1.43e-68 225
Msa0842690 AT2G40150.1 34.153 366 204 9 141 482 69 421 2.26e-68 225
Msa0842690 AT2G38320.2 33.846 325 195 7 171 482 5 322 6.01e-61 203
Msa0842690 AT5G06230.3 38.346 266 151 3 124 381 48 308 2.89e-60 200
Msa0842690 AT5G58600.2 38.298 235 133 4 143 376 66 289 6.68e-60 199
Msa0842690 AT1G78710.2 31.476 359 166 11 128 482 15 297 1.86e-57 192
Msa0842690 AT2G30900.2 38.793 232 126 6 143 371 43 261 1.31e-54 184
Msa0842690 AT2G34070.2 33.210 271 157 5 213 481 1 249 2.39e-54 183
Msa0842690 AT1G01430.1 31.135 379 226 12 124 482 85 448 7.71e-53 185
Msa0842690 AT2G31110.3 35.652 230 136 4 142 371 44 261 2.05e-51 176
Msa0842690 AT4G25360.1 27.551 392 251 7 117 486 149 529 4.59e-49 177
Msa0842690 AT4G25360.2 27.551 392 251 7 117 486 149 529 4.59e-49 177
Msa0842690 AT1G70230.1 30.986 355 211 12 143 483 79 413 1.52e-48 172
Msa0842690 AT5G51640.1 27.720 386 245 8 129 491 124 498 1.53e-47 172
Msa0842690 AT4G01080.1 28.871 381 240 10 116 482 68 431 6.63e-47 169
Msa0842690 AT4G23790.1 32.692 364 211 14 141 482 77 428 4.04e-46 166
Msa0842690 AT5G64470.3 30.220 364 215 15 143 486 55 399 4.89e-46 165
Msa0842690 AT2G31110.1 36.486 222 125 4 261 481 8 214 1.36e-45 159
Msa0842690 AT4G11090.1 29.064 406 249 14 109 486 35 429 2.58e-45 164
Msa0842690 AT5G64470.2 29.810 369 216 14 143 486 55 405 7.70e-45 162
Msa0842690 AT2G40160.3 32.549 255 154 5 135 378 65 312 5.63e-44 157
Msa0842690 AT3G14850.1 29.851 268 166 5 213 478 1 248 9.86e-43 152
Msa0842690 AT2G14530.1 27.371 369 214 15 143 481 62 406 6.52e-42 154
Msa0842690 AT5G64020.1 27.123 365 227 13 143 481 57 408 6.43e-41 152
Msa0842690 AT3G02440.2 30.081 369 206 15 143 484 135 478 1.92e-40 152
Msa0842690 AT3G02440.1 30.081 369 206 15 143 484 127 470 2.07e-40 152
Msa0842690 AT5G15890.1 28.814 354 217 10 140 477 184 518 2.34e-40 152
Msa0842690 AT5G15900.1 29.282 362 218 13 141 481 65 409 1.95e-39 148
Msa0842690 AT5G15900.2 29.282 362 218 13 141 481 84 428 3.04e-39 148
Msa0842690 AT2G37720.1 26.761 355 233 11 141 481 141 482 3.47e-37 143
Msa0842690 AT5G20680.6 27.095 358 230 11 140 481 115 457 2.05e-36 140
Msa0842690 AT5G20680.2 27.500 360 226 12 140 481 191 533 6.75e-36 140
Msa0842690 AT5G20680.4 27.500 360 226 12 140 481 209 551 8.67e-36 140
Msa0842690 AT5G20680.1 27.500 360 226 12 140 481 209 551 8.67e-36 140
Msa0842690 AT5G20680.3 27.500 360 226 12 140 481 209 551 8.67e-36 140
Msa0842690 AT5G20680.5 27.500 360 226 12 140 481 209 551 8.67e-36 140
Msa0842690 AT3G28150.1 25.833 360 237 11 138 481 65 410 1.89e-34 134
Msa0842690 AT5G64470.1 30.418 263 153 11 143 388 55 304 1.24e-30 121
Msa0842690 AT5G64470.4 30.000 260 158 9 143 388 55 304 1.26e-30 121

Find 121 sgRNAs with CRISPR-Local

Find 323 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAACGTGTTTATGAAATTTC+AGG 0.201586 5_4:-19921696 Msa0842690:CDS
TCGACTTTCAAAGGCGTAAA+TGG 0.207010 5_4:-19921486 Msa0842690:CDS
GATACTCAGTTACTCATTTC+AGG 0.227306 5_4:-19920826 Msa0842690:intron
GTGTTATCTGGTTTCACTTT+AGG 0.230297 5_4:-19923419 Msa0842690:CDS
TTCAAAGCCTTATTATGATT+TGG 0.236894 5_4:-19923015 Msa0842690:CDS
AGTCAAAATCTCCGCATATT+TGG 0.248075 5_4:-19919134 Msa0842690:three_prime_UTR
TTGGAAAATTGAAAGTGTTT+TGG 0.250320 5_4:+19923523 None:intergenic
CAGATGAAGTGAAAGAGTTT+TGG 0.279632 5_4:+19923504 None:intergenic
TGAAGTTAATGTTTCAAATC+AGG 0.282555 5_4:-19923243 Msa0842690:CDS
GACATTAAGATTGGATTTGA+TGG 0.301012 5_4:-19921454 Msa0842690:CDS
TCAAAGCCTTATTATGATTT+GGG 0.301206 5_4:-19923014 Msa0842690:CDS
GTTGGAGGAAGGAGATAAAT+TGG 0.305632 5_4:+19923319 None:intergenic
AAGTGATCTCCTTTATATAT+TGG 0.322525 5_4:+19919439 None:intergenic
CACAGAAGAAAAGTGTTATC+TGG 0.322787 5_4:-19923431 Msa0842690:CDS
GTGATATATTTGATGGGAAT+TGG 0.330017 5_4:-19923049 Msa0842690:CDS
CATTGAAAACTTGGGCTAGA+TGG 0.333275 5_4:-19920895 Msa0842690:CDS
TTTCACTTCATCTGCTTCAA+TGG 0.337048 5_4:-19923495 Msa0842690:exon
CAAGAACCCAAATCATAATA+AGG 0.338110 5_4:+19923008 None:intergenic
CCGGAACATGTGGGAGTCTA+TGG 0.342268 5_4:-19921751 Msa0842690:CDS
AGGGGTGGGCAATGGAATTC+AGG 0.361754 5_4:-19919487 Msa0842690:CDS
GTCATTTGAGACATTAAGAT+TGG 0.366650 5_4:-19921463 Msa0842690:CDS
GTGATTATGTTAAGTGGAAA+TGG 0.367043 5_4:-19922935 Msa0842690:CDS
CACTTAACATAATCACTATC+AGG 0.372017 5_4:+19922942 None:intergenic
TTCTTGTCCATTTGTGGATA+GGG 0.377871 5_4:-19922991 Msa0842690:CDS
CATCCAGAACTTTGAGTCTT+GGG 0.381940 5_4:+19920930 None:intergenic
TATTCCATTCTGTATATTGA+AGG 0.390229 5_4:+19919304 None:intergenic
CTTTGAGTCTTGGGTATACA+TGG 0.392628 5_4:+19920939 None:intergenic
TATTCCTTGGTTTCCACAAA+AGG 0.397285 5_4:-19919091 Msa0842690:three_prime_UTR
TGATTTGAAACATTAACTTC+AGG 0.402138 5_4:+19923245 None:intergenic
GCATCCAGAACTTTGAGTCT+TGG 0.407081 5_4:+19920929 None:intergenic
ATACAAGGGCATTGAAAACT+TGG 0.409561 5_4:-19920904 Msa0842690:CDS
CTTGGAATATCACAACCATT+TGG 0.409864 5_4:+19922909 None:intergenic
GAAACCGAGCCAATATATAA+AGG 0.409904 5_4:-19919448 Msa0842690:CDS
TTTCAGTAAAATTCCCCAAA+AGG 0.410193 5_4:+19923207 None:intergenic
CCATAGACTCCCACATGTTC+CGG 0.410438 5_4:+19921751 None:intergenic
TTTGGGTTCTTGTCCATTTG+TGG 0.413859 5_4:-19922997 Msa0842690:CDS
GGAAATATCCGTCGAAAATG+AGG 0.416620 5_4:-19919414 Msa0842690:CDS
ATACCCAAGACTCAAAGTTC+TGG 0.418715 5_4:-19920933 Msa0842690:CDS
GTTCTTGTCCATTTGTGGAT+AGG 0.420276 5_4:-19922992 Msa0842690:CDS
AGCATAGAGTAATTCGTTCC+AGG 0.428832 5_4:+19919204 None:intergenic
CATGATACGTGGAAGTTGTC+TGG 0.431390 5_4:+19921430 None:intergenic
AACAAATTCTACAGCTATCA+TGG 0.433157 5_4:+19918960 None:intergenic
ATATTGGCTCGGTTTCTTTG+TGG 0.436211 5_4:+19919455 None:intergenic
TGATATATTTGATGGGAATT+GGG 0.437428 5_4:-19923048 Msa0842690:CDS
TTCAACACATGTATATTCCT+TGG 0.439713 5_4:-19919104 Msa0842690:three_prime_UTR
GATTTGAAACATTAACTTCA+GGG 0.440706 5_4:+19923246 None:intergenic
AGCACCAATGGCTACAATCT+TGG 0.441484 5_4:+19919245 None:intergenic
TTCAGTAAAATTCCCCAAAA+GGG 0.454323 5_4:+19923208 None:intergenic
CTTATGTTCATATATATAAC+CGG 0.456964 5_4:+19919358 None:intergenic
TGTAGCCATTGGTGCTTACC+AGG 0.457279 5_4:-19919238 Msa0842690:CDS
GAGATCATAGTCTTCAATAC+AGG 0.459035 5_4:-19921402 Msa0842690:CDS
ACTCTTCTTCATTCTCTGAA+TGG 0.459484 5_4:-19923355 Msa0842690:CDS
ATGGTTTCAGGGGTGGGCAA+TGG 0.469728 5_4:-19919495 Msa0842690:intron
TCGTTGGGGATTCACTGAAC+CGG 0.469894 5_4:-19921770 Msa0842690:CDS
AGTAATTCGTTCCAGGTATC+CGG 0.470127 5_4:+19919211 None:intergenic
TTTCTTCTGTGTGATGAAAA+GGG 0.473485 5_4:+19923443 None:intergenic
CTTCATCTGCTTCAATGGAA+TGG 0.473699 5_4:-19923490 Msa0842690:exon
CTGATAGTGATTATGTTAAG+TGG 0.479197 5_4:-19922941 Msa0842690:CDS
TCAAAATCCCTATCCACAAA+TGG 0.480614 5_4:+19922984 None:intergenic
TACCAGGAGTACCGGATACC+TGG 0.483798 5_4:-19919222 Msa0842690:CDS
AAACATGAATTTAAGAAGAA+AGG 0.483840 5_4:-19921672 Msa0842690:CDS
TATATAAAGGAGATCACTTA+CGG 0.488578 5_4:-19919435 Msa0842690:CDS
GAAGTTAATGTTTCAAATCA+GGG 0.491814 5_4:-19923242 Msa0842690:CDS
CCATTCTGTATATTGAAGGA+TGG 0.494396 5_4:+19919308 None:intergenic
CTGTAGAATTTGTTGATCAA+AGG 0.496586 5_4:-19918951 Msa0842690:three_prime_UTR
GTGATTGAAACGTTGGAGGA+AGG 0.498670 5_4:+19923308 None:intergenic
CGACTTTCAAAGGCGTAAAT+GGG 0.502002 5_4:-19921485 Msa0842690:CDS
TTCCAGGTATCCGGTACTCC+TGG 0.502493 5_4:+19919220 None:intergenic
GAAAAGTGTGATATATTTGA+TGG 0.504415 5_4:-19923056 Msa0842690:CDS
TCAAATGGGGTTGATAAAGT+TGG 0.506086 5_4:-19923161 Msa0842690:CDS
TCTTCAATACAGGGCATTGG+TGG 0.506186 5_4:-19921392 Msa0842690:CDS
ATTCCTTGGTTTCCACAAAA+GGG 0.507244 5_4:-19919090 Msa0842690:three_prime_UTR
GTCGACTCTTGAACAATGAA+TGG 0.508559 5_4:+19921504 None:intergenic
GAAGGAGATAAATTGGAGAA+TGG 0.510907 5_4:+19923326 None:intergenic
GTTGGGAAAGGTGAAATTGA+TGG 0.511725 5_4:-19923128 Msa0842690:CDS
GGACCCACGAGAAAACATCT+AGG 0.516765 5_4:-19921371 Msa0842690:CDS
AGGAGTGATTGAAACGTTGG+AGG 0.522795 5_4:+19923304 None:intergenic
ATCTCCTTTATATATTGGCT+CGG 0.524264 5_4:+19919444 None:intergenic
AAGAGGAGTGATTGAAACGT+TGG 0.532254 5_4:+19923301 None:intergenic
GAAATATCCGTCGAAAATGA+GGG 0.532898 5_4:-19919413 Msa0842690:CDS
GTTCAAGAGTCGACTTTCAA+AGG 0.533529 5_4:-19921495 Msa0842690:CDS
CATTCTGTATATTGAAGGAT+GGG 0.533672 5_4:+19919309 None:intergenic
TGTCATTGATGCTTTGACGT+AGG 0.535681 5_4:+19921721 None:intergenic
GAGAGTAGATGAGACTTGAG+AGG 0.535793 5_4:+19918787 None:intergenic
AAAGTGTGTGTGTTCGTGTG+TGG 0.538463 5_4:+19923553 None:intergenic
TGTTGATGAATTGTGTAAAG+AGG 0.545883 5_4:+19923284 None:intergenic
TGGAAAAGTTGCGAGGGCAG+AGG 0.548671 5_4:-19921800 Msa0842690:CDS
GTGGAAGAGAATGTGAAAGA+TGG 0.550163 5_4:-19923089 Msa0842690:CDS
GTACTCCTGGTAAGCACCAA+TGG 0.553803 5_4:+19919233 None:intergenic
TGGAAGAGAATGTGAAAGAT+GGG 0.554631 5_4:-19923088 Msa0842690:CDS
AGAGAAGACTATTATCAAGA+AGG 0.560808 5_4:-19920965 Msa0842690:CDS
TTATATATATGAACATAAGT+AGG 0.561203 5_4:-19919354 Msa0842690:CDS
TTGGTGCTTACCAGGAGTAC+CGG 0.561338 5_4:-19919230 Msa0842690:CDS
CAAATGGTTGTGATATTCCA+AGG 0.562662 5_4:-19922908 Msa0842690:intron
CCATCCTTCAATATACAGAA+TGG 0.565344 5_4:-19919308 Msa0842690:CDS
AAGTTCTGGATGCATATACA+AGG 0.565697 5_4:-19920919 Msa0842690:CDS
ATTCACTGAACCGGAACATG+TGG 0.568896 5_4:-19921761 Msa0842690:CDS
AACACCAAGATTGTAGCCAT+TGG 0.569035 5_4:-19919249 Msa0842690:CDS
GACCCACGAGAAAACATCTA+GGG 0.570532 5_4:-19921370 Msa0842690:CDS
AAGTGTGTGTGTTCGTGTGT+GGG 0.577052 5_4:+19923554 None:intergenic
TACAAGGGCATTGAAAACTT+GGG 0.579554 5_4:-19920903 Msa0842690:CDS
AAAGTTGCGAGGGCAGAGGT+TGG 0.587073 5_4:-19921796 Msa0842690:CDS
AAGTGGAAATGGAAGCCAAA+TGG 0.593408 5_4:-19922924 Msa0842690:CDS
TAGTCTTCAATACAGGGCAT+TGG 0.601503 5_4:-19921395 Msa0842690:CDS
TGGGAATTTGAGTGGTTCTG+TGG 0.603331 5_4:-19923108 Msa0842690:CDS
ATCTTGGTGTTGCTCCGCGG+TGG 0.607543 5_4:+19919261 None:intergenic
GAAATTGATGGGAATTTGAG+TGG 0.608110 5_4:-19923116 Msa0842690:CDS
AAAAGTGTGATATATTTGAT+GGG 0.611221 5_4:-19923055 Msa0842690:CDS
CATCCCAAAGATGAAAACTC+CGG 0.613967 5_4:-19919377 Msa0842690:CDS
TGACAATTGTGTCTGCAACT+AGG 0.619900 5_4:+19918998 None:intergenic
TTGGGAAAGGTGAAATTGAT+GGG 0.620476 5_4:-19923127 Msa0842690:CDS
AGATCATAGTCTTCAATACA+GGG 0.637046 5_4:-19921401 Msa0842690:CDS
TTCACTGAACCGGAACATGT+GGG 0.670183 5_4:-19921760 Msa0842690:CDS
ACAATCTTGGTGTTGCTCCG+CGG 0.671013 5_4:+19919258 None:intergenic
GATCTCAGCATCATGATACG+TGG 0.681864 5_4:+19921419 None:intergenic
AGTTCTGGATGCATATACAA+GGG 0.687105 5_4:-19920918 Msa0842690:CDS
TGAAACTTGAACCAAATATG+CGG 0.696053 5_4:+19919123 None:intergenic
GGTGGGCAATGGAATTCAGG+AGG 0.696740 5_4:-19919484 Msa0842690:CDS
ACCCACGAGAAAACATCTAG+GGG 0.706296 5_4:-19921369 Msa0842690:CDS
AGAAGCAGAACGAACCACCG+CGG 0.720633 5_4:-19919275 Msa0842690:CDS
CCCACGAGAAAACATCTAGG+GGG 0.766315 5_4:-19921368 Msa0842690:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATCAAATTAATATTGT+AGG - chr5_4:19922620-19922639 Msa0842690:intron 10.0%
!!! AATTTTAATGTTGTTACTTT+AGG - chr5_4:19919579-19919598 Msa0842690:intron 15.0%
!! ATAGTAAATTAAGAGAAAAA+TGG - chr5_4:19919652-19919671 Msa0842690:intron 15.0%
!! TAAAAAATGCTTTATAGTTT+AGG - chr5_4:19919689-19919708 Msa0842690:intron 15.0%
!!! AACAAGTTTGAATAATTTTA+AGG - chr5_4:19920086-19920105 Msa0842690:intron 15.0%
!! AAACATGATTCTAAATTAAA+AGG - chr5_4:19920248-19920267 Msa0842690:intron 15.0%
!!! TCTCATTAAAATTTTGTTTT+TGG - chr5_4:19920835-19920854 Msa0842690:CDS 15.0%
!!! TTTTGTTTTTGGTAATTTAT+AGG - chr5_4:19920846-19920865 Msa0842690:CDS 15.0%
!! AAAATTTCATGTTAAAATTC+AGG + chr5_4:19921293-19921312 None:intergenic 15.0%
!!! TTTATATATTGTTTGAAACA+TGG - chr5_4:19921709-19921728 Msa0842690:CDS 15.0%
!! TATAGGATTAATACTTTATT+TGG + chr5_4:19921954-19921973 None:intergenic 15.0%
!!! TTTTTAAAATGAGGAAATTT+CGG + chr5_4:19922262-19922281 None:intergenic 15.0%
!!! AAATTTCCTCATTTTAAAAA+TGG - chr5_4:19922262-19922281 Msa0842690:intron 15.0%
!!! CCTAAATATAATTTTTAAGT+GGG + chr5_4:19922288-19922307 None:intergenic 15.0%
!! TAATAATATGATGTTCAATT+TGG + chr5_4:19922599-19922618 None:intergenic 15.0%
!!! TACAATTTAAATTTTTGCAT+AGG + chr5_4:19922820-19922839 None:intergenic 15.0%
!! TTATATATATGAACATAAGT+AGG - chr5_4:19923051-19923070 Msa0842690:CDS 15.0%
!!! AAAAGTGTGATATATTTGAT+GGG - chr5_4:19919350-19919369 Msa0842690:CDS 20.0%
!! ACAGATAAACAATTAGATAT+AGG - chr5_4:19919937-19919956 Msa0842690:intron 20.0%
!! GTAAATAAAGATTCTATTGA+AGG + chr5_4:19920200-19920219 None:intergenic 20.0%
!! TTAGAATCATGTTTATACTT+TGG + chr5_4:19920242-19920261 None:intergenic 20.0%
!! AAACATGAATTTAAGAAGAA+AGG - chr5_4:19920733-19920752 Msa0842690:intron 20.0%
!!! AATAAGCAATTTTGGAAAAA+AGG - chr5_4:19921391-19921410 Msa0842690:CDS 20.0%
!!! GTAAGAATATTTTTGCAAAA+GGG + chr5_4:19921790-19921809 None:intergenic 20.0%
!!! AGTAAGAATATTTTTGCAAA+AGG + chr5_4:19921791-19921810 None:intergenic 20.0%
!!! CTTTTCAGGTTTTAATTTAT+AGG + chr5_4:19921971-19921990 None:intergenic 20.0%
!!! AATCTAAGTCCTTTATTTTT+TGG - chr5_4:19922060-19922079 Msa0842690:intron 20.0%
!!! AGTTTAAAGCCAAAAAATAA+AGG + chr5_4:19922072-19922091 None:intergenic 20.0%
!! TTCATTATTTGTAGTAGAAA+AGG + chr5_4:19922173-19922192 None:intergenic 20.0%
!! TCTACTACAAATAATGAAAT+TGG - chr5_4:19922175-19922194 Msa0842690:intron 20.0%
!! CTACTACAAATAATGAAATT+GGG - chr5_4:19922176-19922195 Msa0842690:intron 20.0%
!! CCCACTTAAAAATTATATTT+AGG - chr5_4:19922285-19922304 Msa0842690:intron 20.0%
!!! GCCTAAATATAATTTTTAAG+TGG + chr5_4:19922289-19922308 None:intergenic 20.0%
!! AAACAGAGTATATTAACATA+TGG + chr5_4:19922335-19922354 None:intergenic 20.0%
!! ATCCAGCAAAATATTATAAT+AGG + chr5_4:19922515-19922534 None:intergenic 20.0%
!! TGTATTGTTGTCAAATTAAT+TGG - chr5_4:19922664-19922683 Msa0842690:intron 20.0%
!! AGAATCTGAATTAAAAATAG+CGG + chr5_4:19922776-19922795 None:intergenic 20.0%
!! CTTATGTTCATATATATAAC+CGG + chr5_4:19923050-19923069 None:intergenic 20.0%
!!! TGGAAAATTGAAAGTGTTTT+GGG + chr5_4:19918884-19918903 None:intergenic 25.0%
!!! TTGGAAAATTGAAAGTGTTT+TGG + chr5_4:19918885-19918904 None:intergenic 25.0%
!! GATTTGAAACATTAACTTCA+GGG + chr5_4:19919162-19919181 None:intergenic 25.0%
!! TGATTTGAAACATTAACTTC+AGG + chr5_4:19919163-19919182 None:intergenic 25.0%
! TGAAGTTAATGTTTCAAATC+AGG - chr5_4:19919162-19919181 Msa0842690:exon 25.0%
! GAAGTTAATGTTTCAAATCA+GGG - chr5_4:19919163-19919182 Msa0842690:exon 25.0%
!! AATGCAAGTTTTCAATCAAA+TGG - chr5_4:19919229-19919248 Msa0842690:CDS 25.0%
!! ATGCAAGTTTTCAATCAAAT+GGG - chr5_4:19919230-19919249 Msa0842690:CDS 25.0%
!! GAAAAGTGTGATATATTTGA+TGG - chr5_4:19919349-19919368 Msa0842690:CDS 25.0%
! TGATATATTTGATGGGAATT+GGG - chr5_4:19919357-19919376 Msa0842690:CDS 25.0%
!!! TTCAAAGCCTTATTATGATT+TGG - chr5_4:19919390-19919409 Msa0842690:CDS 25.0%
!!! TCAAAGCCTTATTATGATTT+GGG - chr5_4:19919391-19919410 Msa0842690:CDS 25.0%
!!! GATTTTGATTGTCATCTTAA+TGG - chr5_4:19919436-19919455 Msa0842690:CDS 25.0%
! CTTTATAGTTTAGGAAACAA+AGG - chr5_4:19919698-19919717 Msa0842690:intron 25.0%
!! AGGAAACAAAGGTATATAAT+AGG - chr5_4:19919709-19919728 Msa0842690:intron 25.0%
!!! TGCAATAGTAAAAGTTTTAG+AGG - chr5_4:19919756-19919775 Msa0842690:intron 25.0%
!!! TTTATCATGGTTCTAAATTC+GGG + chr5_4:19919818-19919837 None:intergenic 25.0%
!!! CTTTATCATGGTTCTAAATT+CGG + chr5_4:19919819-19919838 None:intergenic 25.0%
!! AAATTTAGTTCCTTATCACA+TGG + chr5_4:19920306-19920325 None:intergenic 25.0%
!! AACAGAGTTTGTTTGAATTA+GGG + chr5_4:19920395-19920414 None:intergenic 25.0%
!! AAACAGAGTTTGTTTGAATT+AGG + chr5_4:19920396-19920415 None:intergenic 25.0%
!! AATTCAAACAAACTCTGTTT+TGG - chr5_4:19920396-19920415 Msa0842690:intron 25.0%
! GATAGCATTCATATATTCTA+GGG + chr5_4:19920517-19920536 None:intergenic 25.0%
!!! TTTGAATGCAATTGATTTTC+TGG - chr5_4:19920585-19920604 Msa0842690:intron 25.0%
! AAACGTGTTTATGAAATTTC+AGG - chr5_4:19920709-19920728 Msa0842690:intron 25.0%
! TCCGAGTATAAAACTTATAA+TGG - chr5_4:19920810-19920829 Msa0842690:intron 25.0%
!!! GCCATTATAAGTTTTATACT+CGG + chr5_4:19920814-19920833 None:intergenic 25.0%
!! TTCAAATATCATTTGAAGCA+TGG + chr5_4:19921102-19921121 None:intergenic 25.0%
! CTTCAAATGATATTTGAAGA+TGG - chr5_4:19921104-19921123 Msa0842690:intron 25.0%
!! TATTGTTTTCTTCCTTTACA+TGG - chr5_4:19921650-19921669 Msa0842690:CDS 25.0%
!!! TTAATCTGCATGCTTTTTAT+TGG - chr5_4:19921821-19921840 Msa0842690:CDS 25.0%
!!! TTTTTTGAAGTTCAGAGTAA+GGG + chr5_4:19921906-19921925 None:intergenic 25.0%
!!! ATTTTTTGAAGTTCAGAGTA+AGG + chr5_4:19921907-19921926 None:intergenic 25.0%
!! AGGATTAATACTTTATTTGG+AGG + chr5_4:19921951-19921970 None:intergenic 25.0%
!! GTGCTTTAATATTTCTTTTC+AGG + chr5_4:19921985-19922004 None:intergenic 25.0%
! AAAGAAATATTAAAGCACAC+TGG - chr5_4:19921987-19922006 Msa0842690:intron 25.0%
! AAGAAATATTAAAGCACACT+GGG - chr5_4:19921988-19922007 Msa0842690:intron 25.0%
! AGTATATTAACATATGGTCA+GGG + chr5_4:19922329-19922348 None:intergenic 25.0%
!!! TCTGTTTCTTTTTTGTTAAG+AGG - chr5_4:19922348-19922367 Msa0842690:intron 25.0%
!! GTGATTATATCTCTAGATTT+TGG + chr5_4:19922422-19922441 None:intergenic 25.0%
! TATTATAATAGGAGCAAAAG+CGG + chr5_4:19922504-19922523 None:intergenic 25.0%
!! CTCCTATTATAATATTTTGC+TGG - chr5_4:19922510-19922529 Msa0842690:intron 25.0%
!!! CTTTAGCTATTTTATATGAC+AGG - chr5_4:19922542-19922561 Msa0842690:intron 25.0%
! TTTAATTCAGATTCTCACAT+TGG - chr5_4:19922781-19922800 Msa0842690:intron 25.0%
!!! TTTTTTGCACCATATTTATC+TGG - chr5_4:19922856-19922875 Msa0842690:intron 25.0%
! AACAGTGTTAAAATTCAACA+TGG + chr5_4:19922886-19922905 None:intergenic 25.0%
!!! AATTTTAACACTGTTTGACA+TGG - chr5_4:19922891-19922910 Msa0842690:intron 25.0%
! AAGTGATCTCCTTTATATAT+TGG + chr5_4:19922969-19922988 None:intergenic 25.0%
! TATATAAAGGAGATCACTTA+CGG - chr5_4:19922970-19922989 Msa0842690:CDS 25.0%
! TATTCCATTCTGTATATTGA+AGG + chr5_4:19923104-19923123 None:intergenic 25.0%
! TATGCTTCTCTCTTAAAAAA+TGG - chr5_4:19923218-19923237 Msa0842690:CDS 25.0%
! TCTCTCTTAAAAAATGGTAA+AGG - chr5_4:19923224-19923243 Msa0842690:CDS 25.0%
! CTCTCTTAAAAAATGGTAAA+GGG - chr5_4:19923225-19923244 Msa0842690:CDS 25.0%
! TAAAAAATGGTAAAGGGAAT+TGG - chr5_4:19923231-19923250 Msa0842690:CDS 25.0%
TTTCTTCTGTGTGATGAAAA+GGG + chr5_4:19918965-19918984 None:intergenic 30.0%
! TTTTCTTCTGTGTGATGAAA+AGG + chr5_4:19918966-19918985 None:intergenic 30.0%
! TGTTGATGAATTGTGTAAAG+AGG + chr5_4:19919124-19919143 None:intergenic 30.0%
TTCAGTAAAATTCCCCAAAA+GGG + chr5_4:19919200-19919219 None:intergenic 30.0%
TTTCAGTAAAATTCCCCAAA+AGG + chr5_4:19919201-19919220 None:intergenic 30.0%
! TTGGGGAATTTTACTGAAAA+TGG - chr5_4:19919202-19919221 Msa0842690:CDS 30.0%
! TGCAAGTTTTCAATCAAATG+GGG - chr5_4:19919231-19919250 Msa0842690:CDS 30.0%
!!! AAAGTTGGTAACTTTTCTGT+TGG - chr5_4:19919259-19919278 Msa0842690:CDS 30.0%
!!! AAGTTGGTAACTTTTCTGTT+GGG - chr5_4:19919260-19919279 Msa0842690:CDS 30.0%
GTGATATATTTGATGGGAAT+TGG - chr5_4:19919356-19919375 Msa0842690:CDS 30.0%
CAAGAACCCAAATCATAATA+AGG + chr5_4:19919400-19919419 None:intergenic 30.0%
CACTTAACATAATCACTATC+AGG + chr5_4:19919466-19919485 None:intergenic 30.0%
! CTGATAGTGATTATGTTAAG+TGG - chr5_4:19919464-19919483 Msa0842690:CDS 30.0%
GTGATTATGTTAAGTGGAAA+TGG - chr5_4:19919470-19919489 Msa0842690:CDS 30.0%
TGCATAAACTATACATACCT+TGG + chr5_4:19919517-19919536 None:intergenic 30.0%
AGGTATATAATAGGAAGACA+AGG - chr5_4:19919718-19919737 Msa0842690:intron 30.0%
! CGAATTTAGAACCATGATAA+AGG - chr5_4:19919817-19919836 Msa0842690:intron 30.0%
AGAACCATGATAAAGGAAAT+TGG - chr5_4:19919824-19919843 Msa0842690:intron 30.0%
TCATCCAATTTCCTTTATCA+TGG + chr5_4:19919831-19919850 None:intergenic 30.0%
TAAAGGAAATTGGATGATAG+AGG - chr5_4:19919834-19919853 Msa0842690:intron 30.0%
!! TAGGTGTTGAATTGAGTTAA+TGG - chr5_4:19919956-19919975 Msa0842690:intron 30.0%
TATGATTAGAAACATCTGCA+TGG + chr5_4:19919991-19920010 None:intergenic 30.0%
TTAACTTTCACCTCTTGTAA+GGG + chr5_4:19920067-19920086 None:intergenic 30.0%
! TTTAACTTTCACCTCTTGTA+AGG + chr5_4:19920068-19920087 None:intergenic 30.0%
GTGATAAGGAACTAAATTTG+AGG - chr5_4:19920307-19920326 Msa0842690:intron 30.0%
GAGTGTTAATAATGATCAGT+AGG - chr5_4:19920418-19920437 Msa0842690:intron 30.0%
TTAAAATTACTGTCGCTGTT+TGG + chr5_4:19920493-19920512 None:intergenic 30.0%
GGATAGCATTCATATATTCT+AGG + chr5_4:19920518-19920537 None:intergenic 30.0%
TACTCGGAATAAAAATAGCA+AGG + chr5_4:19920798-19920817 None:intergenic 30.0%
! GTCATTTGAGACATTAAGAT+TGG - chr5_4:19920942-19920961 Msa0842690:CDS 30.0%
GACATTAAGATTGGATTTGA+TGG - chr5_4:19920951-19920970 Msa0842690:CDS 30.0%
AGATCATAGTCTTCAATACA+GGG - chr5_4:19921004-19921023 Msa0842690:intron 30.0%
ACACACATGATAATTTGGAA+TGG + chr5_4:19921171-19921190 None:intergenic 30.0%
GTTGTACACACATGATAATT+TGG + chr5_4:19921176-19921195 None:intergenic 30.0%
!! TGTTTTCACTTTTGTTTCAC+TGG - chr5_4:19921342-19921361 Msa0842690:intron 30.0%
! GTGATCGTAATAAGCAATTT+TGG - chr5_4:19921383-19921402 Msa0842690:CDS 30.0%
!!! AAAAGGTTTTGATTGTCAAC+TGG - chr5_4:19921408-19921427 Msa0842690:CDS 30.0%
AGAGAAGACTATTATCAAGA+AGG - chr5_4:19921440-19921459 Msa0842690:CDS 30.0%
ATAGCAAGTCCAGATTATTT+CGG + chr5_4:19921633-19921652 None:intergenic 30.0%
AGAAATATTAAAGCACACTG+GGG - chr5_4:19921989-19922008 Msa0842690:intron 30.0%
GAGTATATTAACATATGGTC+AGG + chr5_4:19922330-19922349 None:intergenic 30.0%
GTTTGAATATTGCACAAGAT+TGG - chr5_4:19922385-19922404 Msa0842690:intron 30.0%
AAATACCAGGTTCTTCATTA+AGG + chr5_4:19922737-19922756 None:intergenic 30.0%
! ATCTCCTTTATATATTGGCT+CGG + chr5_4:19922964-19922983 None:intergenic 30.0%
CATTCTGTATATTGAAGGAT+GGG + chr5_4:19923099-19923118 None:intergenic 30.0%
TGAAACTTGAACCAAATATG+CGG + chr5_4:19923285-19923304 None:intergenic 30.0%
TTCAACACATGTATATTCCT+TGG - chr5_4:19923301-19923320 Msa0842690:CDS 30.0%
AACAAATTCTACAGCTATCA+TGG + chr5_4:19923448-19923467 None:intergenic 30.0%
!! CTGTAGAATTTGTTGATCAA+AGG - chr5_4:19923454-19923473 Msa0842690:CDS 30.0%
!! GAAAGTGTGTGCAATTTTGT+AGG + chr5_4:19918832-19918851 None:intergenic 35.0%
! CAGATGAAGTGAAAGAGTTT+TGG + chr5_4:19918904-19918923 None:intergenic 35.0%
TTTCACTTCATCTGCTTCAA+TGG - chr5_4:19918910-19918929 Msa0842690:three_prime_UTR 35.0%
!! CACAGAAGAAAAGTGTTATC+TGG - chr5_4:19918974-19918993 Msa0842690:three_prime_UTR 35.0%
! GTGTTATCTGGTTTCACTTT+AGG - chr5_4:19918986-19919005 Msa0842690:three_prime_UTR 35.0%
ACTCTTCTTCATTCTCTGAA+TGG - chr5_4:19919050-19919069 Msa0842690:three_prime_UTR 35.0%
GAAGGAGATAAATTGGAGAA+TGG + chr5_4:19919082-19919101 None:intergenic 35.0%
! GGTTTTCAGAATACCCTTTT+GGG - chr5_4:19919184-19919203 Msa0842690:CDS 35.0%
! GTTTTCAGAATACCCTTTTG+GGG - chr5_4:19919185-19919204 Msa0842690:CDS 35.0%
!! TCAAATGGGGTTGATAAAGT+TGG - chr5_4:19919244-19919263 Msa0842690:CDS 35.0%
TTGGGAAAGGTGAAATTGAT+GGG - chr5_4:19919278-19919297 Msa0842690:CDS 35.0%
GAAATTGATGGGAATTTGAG+TGG - chr5_4:19919289-19919308 Msa0842690:CDS 35.0%
TGGAAGAGAATGTGAAAGAT+GGG - chr5_4:19919317-19919336 Msa0842690:CDS 35.0%
TTCTTGTCCATTTGTGGATA+GGG - chr5_4:19919414-19919433 Msa0842690:CDS 35.0%
TCAAAATCCCTATCCACAAA+TGG + chr5_4:19919424-19919443 None:intergenic 35.0%
CTTGGAATATCACAACCATT+TGG + chr5_4:19919499-19919518 None:intergenic 35.0%
CAAATGGTTGTGATATTCCA+AGG - chr5_4:19919497-19919516 Msa0842690:intron 35.0%
AATAGCAATGACTGCAATTG+CGG - chr5_4:19919786-19919805 Msa0842690:intron 35.0%
TAACTTTCACCTCTTGTAAG+GGG + chr5_4:19920066-19920085 None:intergenic 35.0%
! ATTGAGAGTGAGTAACCTTT+TGG - chr5_4:19920143-19920162 Msa0842690:intron 35.0%
! TTGAGAGTGAGTAACCTTTT+GGG - chr5_4:19920144-19920163 Msa0842690:intron 35.0%
! ACACAAGTAAACAAGCATTG+TGG + chr5_4:19920174-19920193 None:intergenic 35.0%
! TTTAGTTCCTTATCACATGG+TGG + chr5_4:19920303-19920322 None:intergenic 35.0%
TAGGGATGTTGAAGATTGAA+GGG + chr5_4:19920377-19920396 None:intergenic 35.0%
TTAGGGATGTTGAAGATTGA+AGG + chr5_4:19920378-19920397 None:intergenic 35.0%
TCAATTGCATTCAAACTGAG+AGG + chr5_4:19920580-19920599 None:intergenic 35.0%
!! ATTTTCTGGAAAAGTTGCGA+GGG - chr5_4:19920599-19920618 Msa0842690:intron 35.0%
! TGTCTACGCTTTTAGATTTG+AGG - chr5_4:19920756-19920775 Msa0842690:intron 35.0%
GAGATCATAGTCTTCAATAC+AGG - chr5_4:19921003-19921022 Msa0842690:intron 35.0%
! CACATGATAATTTGGAATGG+AGG + chr5_4:19921168-19921187 None:intergenic 35.0%
!! AAGTTCTGGATGCATATACA+AGG - chr5_4:19921486-19921505 Msa0842690:CDS 35.0%
!! AGTTCTGGATGCATATACAA+GGG - chr5_4:19921487-19921506 Msa0842690:CDS 35.0%
!! ATACAAGGGCATTGAAAACT+TGG - chr5_4:19921501-19921520 Msa0842690:CDS 35.0%
!! TACAAGGGCATTGAAAACTT+GGG - chr5_4:19921502-19921521 Msa0842690:CDS 35.0%
GATACTCAGTTACTCATTTC+AGG - chr5_4:19921579-19921598 Msa0842690:intron 35.0%
TTCCAAAACCCGAAATAATC+TGG - chr5_4:19921621-19921640 Msa0842690:intron 35.0%
TAGCAAGTCCAGATTATTTC+GGG + chr5_4:19921632-19921651 None:intergenic 35.0%
!! TCAATTTTCGAGCCATGTAA+AGG + chr5_4:19921665-19921684 None:intergenic 35.0%
TTGAAACATGGCATGAAAAC+TGG - chr5_4:19921721-19921740 Msa0842690:CDS 35.0%
ACACAAGCTTATGACATTCA+TGG - chr5_4:19922141-19922160 Msa0842690:intron 35.0%
!!! AGTGGGCCATTTTTAAAATG+AGG + chr5_4:19922271-19922290 None:intergenic 35.0%
TTAGGCCTATAACTGTATTC+CGG - chr5_4:19922303-19922322 Msa0842690:intron 35.0%
CAGCATCAAATATTGAATGC+AGG + chr5_4:19922646-19922665 None:intergenic 35.0%
TTGTACCTTAATGAAGAACC+TGG - chr5_4:19922729-19922748 Msa0842690:intron 35.0%
AGTGGACACAATTAAATACC+AGG + chr5_4:19922750-19922769 None:intergenic 35.0%
TGGTATTTAATTGTGTCCAC+TGG - chr5_4:19922749-19922768 Msa0842690:intron 35.0%
AATTAAAAATAGCGGTCCAG+TGG + chr5_4:19922768-19922787 None:intergenic 35.0%
CATGGCATACCAGATAAATA+TGG + chr5_4:19922868-19922887 None:intergenic 35.0%
GAAACCGAGCCAATATATAA+AGG - chr5_4:19922957-19922976 Msa0842690:CDS 35.0%
GAAATATCCGTCGAAAATGA+GGG - chr5_4:19922992-19923011 Msa0842690:CDS 35.0%
! TAACCGGAGTTTTCATCTTT+GGG + chr5_4:19923034-19923053 None:intergenic 35.0%
! ATAACCGGAGTTTTCATCTT+TGG + chr5_4:19923035-19923054 None:intergenic 35.0%
CCATTCTGTATATTGAAGGA+TGG + chr5_4:19923100-19923119 None:intergenic 35.0%
CCATCCTTCAATATACAGAA+TGG - chr5_4:19923097-19923116 Msa0842690:CDS 35.0%
AGTCAAAATCTCCGCATATT+TGG - chr5_4:19923271-19923290 Msa0842690:CDS 35.0%
TATTCCTTGGTTTCCACAAA+AGG - chr5_4:19923314-19923333 Msa0842690:CDS 35.0%
ATTCCTTGGTTTCCACAAAA+GGG - chr5_4:19923315-19923334 Msa0842690:CDS 35.0%
! AAATCAAAGACACCCTTTTG+TGG + chr5_4:19923330-19923349 None:intergenic 35.0%
CTTCATCTGCTTCAATGGAA+TGG - chr5_4:19918915-19918934 Msa0842690:three_prime_UTR 40.0%
GTTGGAGGAAGGAGATAAAT+TGG + chr5_4:19919089-19919108 None:intergenic 40.0%
AAGAGGAGTGATTGAAACGT+TGG + chr5_4:19919107-19919126 None:intergenic 40.0%
! GGGTTTTCAGAATACCCTTT+TGG - chr5_4:19919183-19919202 Msa0842690:CDS 40.0%
! GGTAACTTTTCTGTTGGGAA+AGG - chr5_4:19919265-19919284 Msa0842690:CDS 40.0%
GTTGGGAAAGGTGAAATTGA+TGG - chr5_4:19919277-19919296 Msa0842690:CDS 40.0%
GTGGAAGAGAATGTGAAAGA+TGG - chr5_4:19919316-19919335 Msa0842690:CDS 40.0%
! TTTGGGTTCTTGTCCATTTG+TGG - chr5_4:19919408-19919427 Msa0842690:CDS 40.0%
GTTCTTGTCCATTTGTGGAT+AGG - chr5_4:19919413-19919432 Msa0842690:CDS 40.0%
AAGTGGAAATGGAAGCCAAA+TGG - chr5_4:19919481-19919500 Msa0842690:CDS 40.0%
!! ATGGTTCTAAATTCGGGTTG+TGG + chr5_4:19919812-19919831 None:intergenic 40.0%
AGGCAAGAATATGTGCCTTA+TGG - chr5_4:19919854-19919873 Msa0842690:intron 40.0%
CAAGAATATGTGCCTTATGG+CGG - chr5_4:19919857-19919876 Msa0842690:intron 40.0%
TACACATTACCCCTTACAAG+AGG - chr5_4:19920054-19920073 Msa0842690:intron 40.0%
! TGAGAGTGAGTAACCTTTTG+GGG - chr5_4:19920145-19920164 Msa0842690:intron 40.0%
ATCACATGGTGGTTAATGGA+GGG + chr5_4:19920292-19920311 None:intergenic 40.0%
TATCACATGGTGGTTAATGG+AGG + chr5_4:19920293-19920312 None:intergenic 40.0%
CCTTATCACATGGTGGTTAA+TGG + chr5_4:19920296-19920315 None:intergenic 40.0%
CCATTAACCACCATGTGATA+AGG - chr5_4:19920293-19920312 Msa0842690:intron 40.0%
AGGCTGTGCTTTAATGTCAT+TGG - chr5_4:19920438-19920457 Msa0842690:intron 40.0%
CTGTGCTTTAATGTCATTGG+CGG - chr5_4:19920441-19920460 Msa0842690:intron 40.0%
!! GATTTTCTGGAAAAGTTGCG+AGG - chr5_4:19920598-19920617 Msa0842690:intron 40.0%
TGTCATTGATGCTTTGACGT+AGG + chr5_4:19920687-19920706 None:intergenic 40.0%
! GTCGACTCTTGAACAATGAA+TGG + chr5_4:19920904-19920923 None:intergenic 40.0%
! GTTCAAGAGTCGACTTTCAA+AGG - chr5_4:19920910-19920929 Msa0842690:CDS 40.0%
! TCGACTTTCAAAGGCGTAAA+TGG - chr5_4:19920919-19920938 Msa0842690:CDS 40.0%
! CGACTTTCAAAGGCGTAAAT+GGG - chr5_4:19920920-19920939 Msa0842690:CDS 40.0%
TAGTCTTCAATACAGGGCAT+TGG - chr5_4:19921010-19921029 Msa0842690:intron 40.0%
CATGGAAATAGACAATGCGA+AGG + chr5_4:19921084-19921103 None:intergenic 40.0%
CTTTGAGTCTTGGGTATACA+TGG + chr5_4:19921469-19921488 None:intergenic 40.0%
ATACCCAAGACTCAAAGTTC+TGG - chr5_4:19921472-19921491 Msa0842690:CDS 40.0%
CATCCAGAACTTTGAGTCTT+GGG + chr5_4:19921478-19921497 None:intergenic 40.0%
! CATTGAAAACTTGGGCTAGA+TGG - chr5_4:19921510-19921529 Msa0842690:CDS 40.0%
! CGAACACATGTTTTCTTCAG+AGG - chr5_4:19921557-19921576 Msa0842690:intron 40.0%
!!! GTCCAGATTATTTCGGGTTT+TGG + chr5_4:19921626-19921645 None:intergenic 40.0%
TACATGGCTCGAAAATTGAC+TGG - chr5_4:19921666-19921685 Msa0842690:CDS 40.0%
AATATTAAAGCACACTGGGG+TGG - chr5_4:19921992-19922011 Msa0842690:intron 40.0%
AAGCTTGTGTTCAAATCTGC+TGG + chr5_4:19922131-19922150 None:intergenic 40.0%
TATTAACATATGGTCAGGGC+CGG + chr5_4:19922325-19922344 None:intergenic 40.0%
ACACTGTTTGACATGGTTTC+AGG - chr5_4:19922898-19922917 Msa0842690:intron 40.0%
CACTGTTTGACATGGTTTCA+GGG - chr5_4:19922899-19922918 Msa0842690:intron 40.0%
ACTGTTTGACATGGTTTCAG+GGG - chr5_4:19922900-19922919 Msa0842690:intron 40.0%
!! ATATTGGCTCGGTTTCTTTG+TGG + chr5_4:19922953-19922972 None:intergenic 40.0%
GGAAATATCCGTCGAAAATG+AGG - chr5_4:19922991-19923010 Msa0842690:CDS 40.0%
!! TCTAAAGCCCTCATTTTCGA+CGG + chr5_4:19923002-19923021 None:intergenic 40.0%
CATCCCAAAGATGAAAACTC+CGG - chr5_4:19923028-19923047 Msa0842690:CDS 40.0%
AACACCAAGATTGTAGCCAT+TGG - chr5_4:19923156-19923175 Msa0842690:CDS 40.0%
AGTAATTCGTTCCAGGTATC+CGG + chr5_4:19923197-19923216 None:intergenic 40.0%
AGCATAGAGTAATTCGTTCC+AGG + chr5_4:19923204-19923223 None:intergenic 40.0%
TGACAATTGTGTCTGCAACT+AGG + chr5_4:19923410-19923429 None:intergenic 40.0%
AAGTGTGTGTGTTCGTGTGT+GGG + chr5_4:19918854-19918873 None:intergenic 45.0%
AAAGTGTGTGTGTTCGTGTG+TGG + chr5_4:19918855-19918874 None:intergenic 45.0%
GTGATTGAAACGTTGGAGGA+AGG + chr5_4:19919100-19919119 None:intergenic 45.0%
AGGAGTGATTGAAACGTTGG+AGG + chr5_4:19919104-19919123 None:intergenic 45.0%
! TGGGAATTTGAGTGGTTCTG+TGG - chr5_4:19919297-19919316 Msa0842690:CDS 45.0%
ACACAAGATCTACCGCCATA+AGG + chr5_4:19919872-19919891 None:intergenic 45.0%
! GAGAGTGAGTAACCTTTTGG+GGG - chr5_4:19920146-19920165 Msa0842690:intron 45.0%
! AGAGTGAGTAACCTTTTGGG+GGG - chr5_4:19920147-19920166 Msa0842690:intron 45.0%
TCACATGGTGGTTAATGGAG+GGG + chr5_4:19920291-19920310 None:intergenic 45.0%
ATTCCCTTCCCATTAGGCTT+TGG - chr5_4:19920347-19920366 Msa0842690:intron 45.0%
AAGCCAAAGCCTAATGGGAA+GGG + chr5_4:19920353-19920372 None:intergenic 45.0%
TAAGCCAAAGCCTAATGGGA+AGG + chr5_4:19920354-19920373 None:intergenic 45.0%
AGGGTAAGCCAAAGCCTAAT+GGG + chr5_4:19920358-19920377 None:intergenic 45.0%
AAGGGTAAGCCAAAGCCTAA+TGG + chr5_4:19920359-19920378 None:intergenic 45.0%
ATTCACTGAACCGGAACATG+TGG - chr5_4:19920644-19920663 Msa0842690:intron 45.0%
TTCACTGAACCGGAACATGT+GGG - chr5_4:19920645-19920664 Msa0842690:intron 45.0%
CATGATACGTGGAAGTTGTC+TGG + chr5_4:19920978-19920997 None:intergenic 45.0%
GATCTCAGCATCATGATACG+TGG + chr5_4:19920989-19921008 None:intergenic 45.0%
!! TCTTCAATACAGGGCATTGG+TGG - chr5_4:19921013-19921032 Msa0842690:intron 45.0%
GACCCACGAGAAAACATCTA+GGG - chr5_4:19921035-19921054 Msa0842690:intron 45.0%
ACCCACGAGAAAACATCTAG+GGG - chr5_4:19921036-19921055 Msa0842690:intron 45.0%
AACCGTGAGAACTGACTGTA+AGG + chr5_4:19921254-19921273 None:intergenic 45.0%
GCATCCAGAACTTTGAGTCT+TGG + chr5_4:19921479-19921498 None:intergenic 45.0%
!! GACTGGTGTTACTTTGTAGC+TGG - chr5_4:19921683-19921702 Msa0842690:CDS 45.0%
TGATGGTCAATGGCAAAGGT+GGG + chr5_4:19921754-19921773 None:intergenic 45.0%
TCAGTGATGGTCAATGGCAA+AGG + chr5_4:19921758-19921777 None:intergenic 45.0%
GTCAACTCAGTGATGGTCAA+TGG + chr5_4:19921764-19921783 None:intergenic 45.0%
GAGACTGTGAACCATATGCA+AGG - chr5_4:19921850-19921869 Msa0842690:intron 45.0%
GCTTGAACTGACCTTGCATA+TGG + chr5_4:19921864-19921883 None:intergenic 45.0%
ACGTGTCTCTCACAATTCAG+TGG - chr5_4:19922027-19922046 Msa0842690:intron 45.0%
GTGTTCAAATCTGCTGGAAG+AGG + chr5_4:19922125-19922144 None:intergenic 45.0%
TTTGACATGGTTTCAGGGGT+GGG - chr5_4:19922904-19922923 Msa0842690:intron 45.0%
! TTGAAGGATGGGCGTCTTTT+CGG + chr5_4:19923088-19923107 None:intergenic 45.0%
AGCACCAATGGCTACAATCT+TGG + chr5_4:19923163-19923182 None:intergenic 45.0%
! ACACCCTTTTGTGGAAACCA+AGG + chr5_4:19923321-19923340 None:intergenic 45.0%
!! AATAATTTATAAAATATACA+AGG + chr5_4:19920539-19920558 None:intergenic 5.0%
!!! TTTAGTTTAAATAATATTAA+CGG - chr5_4:19922456-19922475 Msa0842690:intron 5.0%
CACATGGTGGTTAATGGAGG+GGG + chr5_4:19920290-19920309 None:intergenic 50.0%
ACCGACATTCCCTTCCCATT+AGG - chr5_4:19920341-19920360 Msa0842690:intron 50.0%
GCCTAATGGGAAGGGAATGT+CGG + chr5_4:19920345-19920364 None:intergenic 50.0%
!!! GGCAGAGGTTGGTTTTCGTT+GGG - chr5_4:19920620-19920639 Msa0842690:intron 50.0%
!!! GCAGAGGTTGGTTTTCGTTG+GGG - chr5_4:19920621-19920640 Msa0842690:intron 50.0%
TCGTTGGGGATTCACTGAAC+CGG - chr5_4:19920635-19920654 Msa0842690:intron 50.0%
CCATAGACTCCCACATGTTC+CGG + chr5_4:19920657-19920676 None:intergenic 50.0%
GGACCCACGAGAAAACATCT+AGG - chr5_4:19921034-19921053 Msa0842690:intron 50.0%
! CCCCCTAGATGTTTTCTCGT+GGG + chr5_4:19921040-19921059 None:intergenic 50.0%
CCCACGAGAAAACATCTAGG+GGG - chr5_4:19921037-19921056 Msa0842690:intron 50.0%
! ACCCCCTAGATGTTTTCTCG+TGG + chr5_4:19921041-19921060 None:intergenic 50.0%
CGTGAGAACTGACTGTAAGG+CGG + chr5_4:19921251-19921270 None:intergenic 50.0%
CGCCTTACAGTCAGTTCTCA+CGG - chr5_4:19921249-19921268 Msa0842690:intron 50.0%
CAATGGCAAAGGTGGGAGTT+CGG + chr5_4:19921747-19921766 None:intergenic 50.0%
GTGATGGTCAATGGCAAAGG+TGG + chr5_4:19921755-19921774 None:intergenic 50.0%
!! AGGGCTAGTCAACTCAGTGA+TGG + chr5_4:19921771-19921790 None:intergenic 50.0%
CAGGGCCGGAATACAGTTAT+AGG + chr5_4:19922311-19922330 None:intergenic 50.0%
GTTTGACATGGTTTCAGGGG+TGG - chr5_4:19922903-19922922 Msa0842690:intron 50.0%
!! ACAATCTTGGTGTTGCTCCG+CGG + chr5_4:19923150-19923169 None:intergenic 50.0%
! TGTAGCCATTGGTGCTTACC+AGG - chr5_4:19923167-19923186 Msa0842690:CDS 50.0%
GTACTCCTGGTAAGCACCAA+TGG + chr5_4:19923175-19923194 None:intergenic 50.0%
! TTGGTGCTTACCAGGAGTAC+CGG - chr5_4:19923175-19923194 Msa0842690:CDS 50.0%
AGCATTGTGGTCCCCCCAAA+AGG + chr5_4:19920161-19920180 None:intergenic 55.0%
GGTTAATGGAGGGGGACAGA+CGG + chr5_4:19920282-19920301 None:intergenic 55.0%
TGGAAAAGTTGCGAGGGCAG+AGG - chr5_4:19920605-19920624 Msa0842690:intron 55.0%
AAAGTTGCGAGGGCAGAGGT+TGG - chr5_4:19920609-19920628 Msa0842690:intron 55.0%
!!! GGGCAGAGGTTGGTTTTCGT+TGG - chr5_4:19920619-19920638 Msa0842690:intron 55.0%
CCGGAACATGTGGGAGTCTA+TGG - chr5_4:19920654-19920673 Msa0842690:intron 55.0%
GAGAACTGACTGTAAGGCGG+AGG + chr5_4:19921248-19921267 None:intergenic 55.0%
!! AGCACACTGGGGTGGATTAG+TGG - chr5_4:19922000-19922019 Msa0842690:intron 55.0%
ATGGTTTCAGGGGTGGGCAA+TGG - chr5_4:19922910-19922929 Msa0842690:CDS 55.0%
AGGGGTGGGCAATGGAATTC+AGG - chr5_4:19922918-19922937 Msa0842690:CDS 55.0%
GGTGGGCAATGGAATTCAGG+AGG - chr5_4:19922921-19922940 Msa0842690:CDS 55.0%
AGAAGCAGAACGAACCACCG+CGG - chr5_4:19923130-19923149 Msa0842690:CDS 55.0%
!! TACCAGGAGTACCGGATACC+TGG - chr5_4:19923183-19923202 Msa0842690:CDS 55.0%
TTCCAGGTATCCGGTACTCC+TGG + chr5_4:19923188-19923207 None:intergenic 55.0%
!! ATCTTGGTGTTGCTCCGCGG+TGG + chr5_4:19923147-19923166 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 19918797 19923630 19918797 ID=Msa0842690;Name=Msa0842690
chr5_4 mRNA 19918797 19923630 19918797 ID=Msa0842690-mRNA-1;Parent=Msa0842690;Name=Msa0842690-mRNA-1;_AED=0.04;_eAED=0.04;_QI=132|1|1|1|1|1|5|368|491
chr5_4 exon 19918797 19919507 19918797 ID=Msa0842690-mRNA-1:exon:8270;Parent=Msa0842690-mRNA-1
chr5_4 exon 19920827 19920985 19920827 ID=Msa0842690-mRNA-1:exon:8269;Parent=Msa0842690-mRNA-1
chr5_4 exon 19921369 19921559 19921369 ID=Msa0842690-mRNA-1:exon:8268;Parent=Msa0842690-mRNA-1
chr5_4 exon 19921650 19921842 19921650 ID=Msa0842690-mRNA-1:exon:8267;Parent=Msa0842690-mRNA-1
chr5_4 exon 19922909 19923630 19922909 ID=Msa0842690-mRNA-1:exon:8266;Parent=Msa0842690-mRNA-1
chr5_4 five_prime_UTR 19923499 19923630 19923499 ID=Msa0842690-mRNA-1:five_prime_utr;Parent=Msa0842690-mRNA-1
chr5_4 CDS 19922909 19923498 19922909 ID=Msa0842690-mRNA-1:cds;Parent=Msa0842690-mRNA-1
chr5_4 CDS 19921650 19921842 19921650 ID=Msa0842690-mRNA-1:cds;Parent=Msa0842690-mRNA-1
chr5_4 CDS 19921369 19921559 19921369 ID=Msa0842690-mRNA-1:cds;Parent=Msa0842690-mRNA-1
chr5_4 CDS 19920827 19920985 19920827 ID=Msa0842690-mRNA-1:cds;Parent=Msa0842690-mRNA-1
chr5_4 CDS 19919165 19919507 19919165 ID=Msa0842690-mRNA-1:cds;Parent=Msa0842690-mRNA-1
chr5_4 three_prime_UTR 19918797 19919164 19918797 ID=Msa0842690-mRNA-1:three_prime_utr;Parent=Msa0842690-mRNA-1
Gene Sequence

>Msa0842690

ATGGAATGGAACAAGAGACTAACATTCTCAGAACCCTTTTCATCACACAGAAGAAAAGTGTTATCTGGTTTCACTTTAGGTCTTGTTGCTTCTCTTCTCTTTCTCTCTCTTCTCTTTCTAAACTCTTCTTCATTCTCTGAATGGCATTTTCCATTCTCCAATTTATCTCCTTCCTCCAACGTTTCAATCACTCCTCTTTACACAATTCATCAACAACAATTGAGTAAAATCCCTGAAGTTAATGTTTCAAATCAGGGTTTTCAGAATACCCTTTTGGGGAATTTTACTGAAAATGGTTATAATGCAAGTTTTCAATCAAATGGGGTTGATAAAGTTGGTAACTTTTCTGTTGGGAAAGGTGAAATTGATGGGAATTTGAGTGGTTCTGTGGAAGAGAATGTGAAAGATGGGAAATTTGATGAAAAGTGTGATATATTTGATGGGAATTGGGTGAGAGATGATTCAAAGCCTTATTATGATTTGGGTTCTTGTCCATTTGTGGATAGGGATTTTGATTGTCATCTTAATGGTAGACCTGATAGTGATTATGTTAAGTGGAAATGGAAGCCAAATGGTTGTGATATTCCAAGTTTGAATGCAATTGATTTTCTGGAAAAGTTGCGAGGGCAGAGGTTGGTTTTCGTTGGGGATTCACTGAACCGGAACATGTGGGAGTCTATGGTGTGTATCCTACGTCAAAGCATCAATGACAAGAAACGTGTTTATGAAATTTCAGGAAAACATGAATTTAAGAAGAAAGGTGTCTACGCTTTTAGATTTGAGGATTATAATTGTTCAGTAGATTTTGTGAGTTCACCATTCATTGTTCAAGAGTCGACTTTCAAAGGCGTAAATGGGTCATTTGAGACATTAAGATTGGATTTGATGGACCAGACAACTTCCACGTATCATGATGCTGAGATCATAGTCTTCAATACAGGGCATTGGTGGACCCACGAGAAAACATCTAGGGGAGAAGACTATTATCAAGAAGGCAACCATGTATACCCAAGACTCAAAGTTCTGGATGCATATACAAGGGCATTGAAAACTTGGGCTAGATGGATTGACAACAATATTGACGCAAATCGAACACATGTTTTCTTCAGAGGATACTCAGTTACTCATTTCAGGGGTGGGCAATGGAATTCAGGAGGACAGTGCCACAAAGAAACCGAGCCAATATATAAAGGAGATCACTTACGGAAATATCCGTCGAAAATGAGGGCTTTAGATTATGTCATCCCAAAGATGAAAACTCCGGTTATATATATGAACATAAGTAGGATGACAGATTACCGAAAAGACGCCCATCCTTCAATATACAGAATGGAATACAAGACAGAAGCAGAACGAACCACCGCGGAGCAACACCAAGATTGTAGCCATTGGTGCTTACCAGGAGTACCGGATACCTGGAACGAATTACTCTATGCTTCTCTCTTAAAAAATGGTAAAGGGAATTGGAAAAGTTGA
Protein sequence

>Msa0842690

MEWNKRLTFSEPFSSHRRKVLSGFTLGLVASLLFLSLLFLNSSSFSEWHFPFSNLSPSSNVSITPLYTIHQQQLSKIPEVNVSNQGFQNTLLGNFTENGYNASFQSNGVDKVGNFSVGKGEIDGNLSGSVEENVKDGKFDEKCDIFDGNWVRDDSKPYYDLGSCPFVDRDFDCHLNGRPDSDYVKWKWKPNGCDIPSLNAIDFLEKLRGQRLVFVGDSLNRNMWESMVCILRQSINDKKRVYEISGKHEFKKKGVYAFRFEDYNCSVDFVSSPFIVQESTFKGVNGSFETLRLDLMDQTTSTYHDAEIIVFNTGHWWTHEKTSRGEDYYQEGNHVYPRLKVLDAYTRALKTWARWIDNNIDANRTHVFFRGYSVTHFRGGQWNSGGQCHKETEPIYKGDHLRKYPSKMRALDYVIPKMKTPVIYMNISRMTDYRKDAHPSIYRMEYKTEAERTTAEQHQDCSHWCLPGVPDTWNELLYASLLKNGKGNWKS*