Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0721890 | XP_003613189.1 | 96.552 | 493 | 15 | 1 | 1 | 491 | 1 | 493 | 0.0 | 993 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0721890 | sp|Q8VYR3|TBL2_ARATH | 67.062 | 422 | 128 | 7 | 68 | 485 | 122 | 536 | 0.0 | 587 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0721890 | G7K066 | 96.552 | 493 | 15 | 1 | 1 | 491 | 1 | 493 | 0.0 | 993 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0721890 | Msa0842690 | 0.848120 | 7.505151e-60 | -8.615850e-47 |
Msa0721890 | Msa0872310 | 0.806474 | 8.083626e-50 | -8.615850e-47 |
Msa0721890 | Msa1042970 | 0.942061 | 1.397043e-101 | -8.615850e-47 |
Msa0574890 | Msa0721890 | 0.806038 | 9.989187e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0721890 | MtrunA17_Chr5g0413271 | 95.132 | 493 | 15 | 2 | 1 | 491 | 1 | 486 | 0.0 | 972 |
Msa0721890 | MtrunA17_Chr8g0368461 | 62.172 | 534 | 152 | 8 | 6 | 490 | 5 | 537 | 0.0 | 628 |
Msa0721890 | MtrunA17_Chr1g0175671 | 52.750 | 400 | 185 | 2 | 87 | 482 | 111 | 510 | 1.49e-156 | 455 |
Msa0721890 | MtrunA17_Chr7g0258851 | 52.143 | 420 | 194 | 4 | 66 | 482 | 173 | 588 | 4.75e-154 | 451 |
Msa0721890 | MtrunA17_Chr1g0213281 | 54.294 | 361 | 160 | 3 | 136 | 491 | 168 | 528 | 4.19e-147 | 431 |
Msa0721890 | MtrunA17_Chr4g0068111 | 55.102 | 343 | 149 | 3 | 143 | 482 | 114 | 454 | 1.11e-145 | 425 |
Msa0721890 | MtrunA17_Chr4g0071391 | 49.271 | 343 | 171 | 2 | 141 | 482 | 107 | 447 | 2.69e-134 | 395 |
Msa0721890 | MtrunA17_Chr7g0269991 | 48.696 | 345 | 168 | 3 | 143 | 487 | 137 | 472 | 2.48e-122 | 366 |
Msa0721890 | MtrunA17_Chr2g0287901 | 42.188 | 384 | 201 | 6 | 113 | 483 | 64 | 439 | 9.65e-104 | 317 |
Msa0721890 | MtrunA17_Chr7g0259711 | 42.737 | 358 | 178 | 5 | 141 | 483 | 89 | 434 | 1.79e-100 | 309 |
Msa0721890 | MtrunA17_Chr5g0430371 | 38.592 | 355 | 191 | 5 | 143 | 482 | 58 | 400 | 2.63e-94 | 291 |
Msa0721890 | MtrunA17_Chr3g0105301 | 37.500 | 352 | 191 | 6 | 143 | 482 | 43 | 377 | 3.05e-91 | 283 |
Msa0721890 | MtrunA17_Chr2g0283581 | 38.192 | 343 | 182 | 7 | 143 | 481 | 42 | 358 | 7.79e-87 | 271 |
Msa0721890 | MtrunA17_Chr1g0210771 | 38.776 | 343 | 191 | 8 | 141 | 481 | 57 | 382 | 7.83e-85 | 266 |
Msa0721890 | MtrunA17_Chr1g0171171 | 38.123 | 341 | 195 | 5 | 141 | 481 | 51 | 375 | 1.36e-84 | 265 |
Msa0721890 | MtrunA17_Chr5g0413851 | 39.093 | 353 | 188 | 8 | 135 | 484 | 34 | 362 | 1.76e-84 | 265 |
Msa0721890 | MtrunA17_Chr3g0126021 | 36.785 | 367 | 210 | 6 | 129 | 488 | 115 | 466 | 5.44e-83 | 264 |
Msa0721890 | MtrunA17_Chr4g0045951 | 36.950 | 341 | 192 | 6 | 143 | 482 | 45 | 363 | 7.31e-82 | 258 |
Msa0721890 | MtrunA17_Chr2g0325481 | 36.127 | 346 | 197 | 5 | 138 | 482 | 45 | 367 | 1.29e-81 | 258 |
Msa0721890 | MtrunA17_Chr4g0045941 | 36.919 | 344 | 188 | 6 | 143 | 482 | 33 | 351 | 1.35e-80 | 254 |
Msa0721890 | MtrunA17_Chr3g0097891 | 38.150 | 346 | 183 | 9 | 143 | 482 | 31 | 351 | 3.41e-80 | 253 |
Msa0721890 | MtrunA17_Chr4g0005491 | 37.465 | 355 | 201 | 8 | 142 | 482 | 61 | 408 | 4.41e-80 | 255 |
Msa0721890 | MtrunA17_Chr8g0384151 | 36.337 | 344 | 203 | 4 | 141 | 482 | 88 | 417 | 5.56e-79 | 253 |
Msa0721890 | MtrunA17_Chr4g0006991 | 36.944 | 360 | 205 | 9 | 136 | 481 | 76 | 427 | 2.78e-78 | 251 |
Msa0721890 | MtrunA17_Chr7g0243301 | 36.490 | 359 | 211 | 7 | 136 | 482 | 57 | 410 | 5.53e-78 | 249 |
Msa0721890 | MtrunA17_Chr2g0314801 | 35.942 | 345 | 197 | 7 | 137 | 478 | 27 | 350 | 3.66e-77 | 245 |
Msa0721890 | MtrunA17_Chr3g0113671 | 37.709 | 358 | 196 | 9 | 141 | 482 | 104 | 450 | 9.97e-76 | 245 |
Msa0721890 | MtrunA17_Chr2g0314791 | 36.080 | 352 | 191 | 10 | 139 | 484 | 25 | 348 | 1.26e-75 | 241 |
Msa0721890 | MtrunA17_Chr4g0041011 | 33.146 | 356 | 214 | 5 | 127 | 481 | 31 | 363 | 2.67e-75 | 241 |
Msa0721890 | MtrunA17_Chr5g0437601 | 36.212 | 359 | 206 | 9 | 137 | 482 | 77 | 425 | 4.22e-74 | 240 |
Msa0721890 | MtrunA17_Chr3g0085071 | 34.111 | 343 | 201 | 6 | 141 | 481 | 44 | 363 | 1.49e-73 | 236 |
Msa0721890 | MtrunA17_Chr8g0360521 | 34.417 | 369 | 206 | 9 | 134 | 484 | 62 | 412 | 3.68e-72 | 234 |
Msa0721890 | MtrunA17_Chr3g0114101 | 34.085 | 355 | 207 | 9 | 143 | 482 | 89 | 431 | 1.07e-71 | 234 |
Msa0721890 | MtrunA17_Chr3g0085081 | 33.528 | 343 | 203 | 5 | 141 | 481 | 29 | 348 | 4.04e-71 | 229 |
Msa0721890 | MtrunA17_Chr7g0242701 | 38.017 | 363 | 197 | 11 | 136 | 481 | 76 | 427 | 8.65e-71 | 231 |
Msa0721890 | MtrunA17_Chr3g0091031 | 32.362 | 343 | 207 | 5 | 141 | 481 | 29 | 348 | 1.42e-69 | 226 |
Msa0721890 | MtrunA17_Chr5g0437291 | 35.028 | 354 | 210 | 8 | 143 | 482 | 165 | 512 | 1.47e-69 | 231 |
Msa0721890 | MtrunA17_Chr4g0005481 | 35.817 | 349 | 202 | 9 | 141 | 478 | 106 | 443 | 3.73e-68 | 225 |
Msa0721890 | MtrunA17_Chr1g0178081 | 34.054 | 370 | 176 | 7 | 126 | 487 | 38 | 347 | 6.72e-66 | 216 |
Msa0721890 | MtrunA17_Chr1g0188191 | 30.829 | 386 | 229 | 10 | 129 | 487 | 213 | 587 | 2.90e-51 | 183 |
Msa0721890 | MtrunA17_Chr6g0476041 | 29.494 | 356 | 220 | 9 | 143 | 478 | 167 | 511 | 2.20e-50 | 179 |
Msa0721890 | MtrunA17_Chr8g0347321 | 29.248 | 359 | 224 | 11 | 142 | 482 | 94 | 440 | 3.16e-50 | 177 |
Msa0721890 | MtrunA17_Chr1g0209921 | 36.100 | 241 | 133 | 6 | 141 | 376 | 42 | 266 | 9.02e-49 | 168 |
Msa0721890 | MtrunA17_Chr8g0391481 | 31.536 | 371 | 212 | 14 | 140 | 486 | 24 | 376 | 3.13e-48 | 171 |
Msa0721890 | MtrunA17_Chr7g0226991 | 28.906 | 384 | 237 | 11 | 123 | 486 | 39 | 406 | 5.15e-47 | 168 |
Msa0721890 | MtrunA17_Chr8g0387921 | 29.670 | 364 | 222 | 13 | 142 | 485 | 73 | 422 | 1.59e-44 | 161 |
Msa0721890 | MtrunA17_Chr3g0140371 | 29.365 | 378 | 218 | 14 | 135 | 486 | 10 | 364 | 3.67e-44 | 159 |
Msa0721890 | MtrunA17_Chr6g0456681 | 30.303 | 363 | 211 | 12 | 143 | 481 | 64 | 408 | 4.45e-44 | 160 |
Msa0721890 | MtrunA17_Chr4g0049421 | 30.518 | 367 | 216 | 14 | 143 | 487 | 48 | 397 | 4.64e-44 | 160 |
Msa0721890 | MtrunA17_Chr6g0456691 | 27.930 | 401 | 249 | 10 | 102 | 481 | 38 | 419 | 1.26e-43 | 159 |
Msa0721890 | MtrunA17_Chr2g0283851 | 29.491 | 373 | 208 | 12 | 144 | 485 | 56 | 404 | 3.63e-42 | 155 |
Msa0721890 | MtrunA17_Chr5g0414051 | 29.111 | 371 | 221 | 13 | 138 | 483 | 69 | 422 | 4.15e-41 | 152 |
Msa0721890 | MtrunA17_Chr5g0414061 | 28.610 | 367 | 218 | 14 | 142 | 483 | 93 | 440 | 1.00e-39 | 149 |
Msa0721890 | MtrunA17_Chr6g0455901 | 27.614 | 373 | 213 | 15 | 141 | 481 | 69 | 416 | 1.17e-39 | 148 |
Msa0721890 | MtrunA17_Chr5g0414091 | 28.571 | 357 | 225 | 12 | 140 | 477 | 82 | 427 | 3.22e-39 | 147 |
Msa0721890 | MtrunA17_Chr8g0384421 | 25.000 | 480 | 313 | 15 | 25 | 481 | 17 | 472 | 7.52e-38 | 144 |
Msa0721890 | MtrunA17_Chr6g0451321 | 26.854 | 391 | 251 | 13 | 114 | 485 | 87 | 461 | 2.96e-37 | 142 |
Msa0721890 | MtrunA17_Chr5g0414041 | 27.586 | 377 | 226 | 12 | 135 | 483 | 78 | 435 | 7.53e-37 | 141 |
Msa0721890 | MtrunA17_Chr4g0070341 | 26.346 | 353 | 237 | 9 | 141 | 481 | 130 | 471 | 2.37e-35 | 137 |
Msa0721890 | MtrunA17_Chr2g0287931 | 41.732 | 127 | 68 | 2 | 203 | 325 | 2 | 126 | 2.15e-30 | 114 |
Msa0721890 | MtrunA17_Chr7g0221291 | 51.613 | 93 | 45 | 0 | 141 | 233 | 77 | 169 | 4.83e-30 | 115 |
Msa0721890 | MtrunA17_Chr7g0221271 | 50.538 | 93 | 46 | 0 | 141 | 233 | 77 | 169 | 2.88e-28 | 111 |
Msa0721890 | MtrunA17_Chr3g0085101 | 36.893 | 103 | 63 | 1 | 342 | 442 | 4 | 106 | 1.42e-19 | 84.3 |
Msa0721890 | MtrunA17_Chr7g0221281 | 26.749 | 243 | 154 | 9 | 260 | 485 | 5 | 240 | 2.56e-15 | 75.9 |
Msa0721890 | MtrunA17_Chr1g0209931 | 46.479 | 71 | 29 | 2 | 414 | 484 | 34 | 95 | 1.34e-13 | 67.0 |
Msa0721890 | MtrunA17_Chr5g0414081 | 26.633 | 199 | 117 | 6 | 307 | 483 | 10 | 201 | 1.28e-12 | 67.0 |
Msa0721890 | MtrunA17_Chr5g0429191 | 53.333 | 45 | 20 | 1 | 430 | 474 | 2 | 45 | 1.19e-11 | 59.7 |
Msa0721890 | MtrunA17_Chr2g0287911 | 48.148 | 54 | 21 | 1 | 143 | 196 | 61 | 107 | 8.42e-11 | 59.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0721890 | AT1G60790.1 | 67.062 | 422 | 128 | 7 | 68 | 485 | 122 | 536 | 0.0 | 587 |
Msa0721890 | AT5G06700.1 | 58.065 | 341 | 142 | 1 | 143 | 482 | 255 | 595 | 1.25e-154 | 453 |
Msa0721890 | AT3G12060.1 | 57.185 | 341 | 145 | 1 | 143 | 482 | 196 | 536 | 1.09e-149 | 439 |
Msa0721890 | AT5G49340.1 | 56.268 | 343 | 147 | 3 | 143 | 482 | 100 | 442 | 9.77e-144 | 420 |
Msa0721890 | AT5G20590.1 | 52.478 | 343 | 157 | 4 | 143 | 482 | 141 | 480 | 2.20e-139 | 410 |
Msa0721890 | AT3G62390.1 | 48.718 | 351 | 175 | 2 | 132 | 482 | 127 | 472 | 1.24e-123 | 369 |
Msa0721890 | AT5G19160.1 | 45.333 | 375 | 183 | 6 | 126 | 484 | 79 | 447 | 5.32e-110 | 334 |
Msa0721890 | AT3G06080.2 | 45.299 | 351 | 178 | 6 | 143 | 484 | 103 | 448 | 3.43e-103 | 317 |
Msa0721890 | AT5G20590.2 | 52.941 | 238 | 110 | 2 | 143 | 378 | 141 | 378 | 6.25e-94 | 290 |
Msa0721890 | AT5G06230.2 | 40.000 | 370 | 200 | 5 | 124 | 482 | 7 | 365 | 3.31e-92 | 285 |
Msa0721890 | AT5G06230.1 | 40.000 | 370 | 200 | 5 | 124 | 482 | 48 | 406 | 9.23e-92 | 285 |
Msa0721890 | AT3G11570.1 | 41.590 | 327 | 174 | 4 | 164 | 482 | 103 | 420 | 8.16e-91 | 283 |
Msa0721890 | AT1G29050.1 | 37.941 | 340 | 188 | 4 | 143 | 481 | 61 | 378 | 2.24e-88 | 276 |
Msa0721890 | AT5G58600.1 | 37.644 | 348 | 197 | 8 | 143 | 482 | 66 | 401 | 4.57e-87 | 273 |
Msa0721890 | AT3G62390.2 | 48.627 | 255 | 131 | 0 | 132 | 386 | 127 | 381 | 6.55e-87 | 273 |
Msa0721890 | AT1G78710.1 | 37.326 | 359 | 198 | 10 | 128 | 482 | 22 | 357 | 7.67e-85 | 266 |
Msa0721890 | AT2G34070.1 | 35.393 | 356 | 206 | 5 | 128 | 481 | 50 | 383 | 9.85e-85 | 266 |
Msa0721890 | AT1G48880.1 | 37.069 | 348 | 197 | 5 | 140 | 483 | 112 | 441 | 6.36e-83 | 264 |
Msa0721890 | AT2G31110.2 | 36.070 | 341 | 195 | 6 | 142 | 481 | 44 | 362 | 4.29e-81 | 256 |
Msa0721890 | AT2G30900.1 | 37.861 | 346 | 187 | 8 | 143 | 482 | 43 | 366 | 1.31e-80 | 255 |
Msa0721890 | AT5G19160.2 | 47.692 | 260 | 127 | 3 | 126 | 378 | 79 | 336 | 1.80e-80 | 254 |
Msa0721890 | AT2G40320.1 | 36.872 | 358 | 205 | 8 | 137 | 482 | 75 | 423 | 1.18e-79 | 254 |
Msa0721890 | AT2G42570.1 | 33.983 | 359 | 214 | 5 | 125 | 482 | 29 | 365 | 1.91e-79 | 252 |
Msa0721890 | AT1G73140.1 | 35.537 | 363 | 214 | 9 | 134 | 486 | 58 | 410 | 1.67e-78 | 251 |
Msa0721890 | AT2G30010.1 | 36.158 | 354 | 200 | 8 | 143 | 482 | 56 | 397 | 5.35e-78 | 249 |
Msa0721890 | AT2G30010.2 | 36.158 | 354 | 200 | 8 | 143 | 482 | 99 | 440 | 1.25e-77 | 250 |
Msa0721890 | AT3G11030.1 | 36.134 | 357 | 210 | 8 | 137 | 482 | 100 | 449 | 7.31e-77 | 248 |
Msa0721890 | AT3G54260.1 | 35.549 | 346 | 202 | 7 | 143 | 485 | 51 | 378 | 1.53e-76 | 245 |
Msa0721890 | AT5G01360.2 | 36.188 | 362 | 210 | 8 | 134 | 481 | 24 | 378 | 5.03e-75 | 241 |
Msa0721890 | AT5G01360.1 | 36.188 | 362 | 210 | 8 | 134 | 481 | 80 | 434 | 1.40e-74 | 242 |
Msa0721890 | AT3G06080.1 | 47.059 | 238 | 124 | 2 | 143 | 378 | 103 | 340 | 5.96e-74 | 237 |
Msa0721890 | AT5G01620.2 | 35.493 | 355 | 208 | 8 | 138 | 481 | 105 | 449 | 8.58e-72 | 235 |
Msa0721890 | AT5G01620.1 | 35.493 | 355 | 208 | 8 | 138 | 481 | 105 | 449 | 8.58e-72 | 235 |
Msa0721890 | AT5G01620.3 | 35.493 | 355 | 208 | 8 | 138 | 481 | 113 | 457 | 1.36e-71 | 234 |
Msa0721890 | AT3G14850.2 | 32.941 | 340 | 206 | 5 | 141 | 478 | 32 | 351 | 3.32e-71 | 230 |
Msa0721890 | AT2G40160.2 | 34.232 | 371 | 210 | 9 | 135 | 482 | 65 | 424 | 2.00e-70 | 231 |
Msa0721890 | AT2G40160.1 | 34.153 | 366 | 207 | 9 | 135 | 477 | 65 | 419 | 4.40e-70 | 230 |
Msa0721890 | AT3G55990.1 | 31.579 | 456 | 268 | 13 | 49 | 482 | 51 | 484 | 5.60e-70 | 231 |
Msa0721890 | AT2G38320.1 | 33.978 | 362 | 218 | 8 | 135 | 482 | 51 | 405 | 2.31e-69 | 227 |
Msa0721890 | AT2G40150.1 | 34.153 | 366 | 204 | 9 | 141 | 482 | 69 | 421 | 1.25e-68 | 226 |
Msa0721890 | AT2G38320.2 | 34.154 | 325 | 194 | 7 | 171 | 482 | 5 | 322 | 1.08e-61 | 205 |
Msa0721890 | AT5G06230.3 | 38.346 | 266 | 151 | 3 | 124 | 381 | 48 | 308 | 7.22e-61 | 202 |
Msa0721890 | AT5G58600.2 | 38.298 | 235 | 133 | 4 | 143 | 376 | 66 | 289 | 3.98e-60 | 199 |
Msa0721890 | AT1G78710.2 | 31.476 | 359 | 166 | 11 | 128 | 482 | 15 | 297 | 9.55e-58 | 193 |
Msa0721890 | AT2G34070.2 | 33.210 | 271 | 157 | 5 | 213 | 481 | 1 | 249 | 2.42e-54 | 183 |
Msa0721890 | AT2G30900.2 | 38.793 | 232 | 126 | 6 | 143 | 371 | 43 | 261 | 2.98e-54 | 183 |
Msa0721890 | AT1G01430.1 | 31.135 | 379 | 226 | 12 | 124 | 482 | 85 | 448 | 3.97e-53 | 186 |
Msa0721890 | AT2G31110.3 | 35.652 | 230 | 136 | 4 | 142 | 371 | 44 | 261 | 1.08e-51 | 176 |
Msa0721890 | AT4G25360.1 | 27.551 | 392 | 251 | 7 | 117 | 486 | 149 | 529 | 2.68e-49 | 177 |
Msa0721890 | AT4G25360.2 | 27.551 | 392 | 251 | 7 | 117 | 486 | 149 | 529 | 2.68e-49 | 177 |
Msa0721890 | AT1G70230.1 | 30.986 | 355 | 211 | 12 | 143 | 483 | 79 | 413 | 5.30e-49 | 174 |
Msa0721890 | AT5G51640.1 | 27.720 | 386 | 245 | 8 | 129 | 491 | 124 | 498 | 8.91e-48 | 172 |
Msa0721890 | AT4G01080.1 | 28.871 | 381 | 240 | 10 | 116 | 482 | 68 | 431 | 2.00e-47 | 170 |
Msa0721890 | AT5G64470.3 | 30.495 | 364 | 214 | 15 | 143 | 486 | 55 | 399 | 8.85e-47 | 167 |
Msa0721890 | AT4G23790.1 | 32.692 | 364 | 211 | 14 | 141 | 482 | 77 | 428 | 2.16e-46 | 167 |
Msa0721890 | AT2G31110.1 | 36.486 | 222 | 125 | 4 | 261 | 481 | 8 | 214 | 1.21e-45 | 159 |
Msa0721890 | AT5G64470.2 | 30.081 | 369 | 215 | 14 | 143 | 486 | 55 | 405 | 1.70e-45 | 164 |
Msa0721890 | AT4G11090.1 | 29.064 | 406 | 249 | 14 | 109 | 486 | 35 | 429 | 7.78e-45 | 163 |
Msa0721890 | AT2G40160.3 | 32.549 | 255 | 154 | 5 | 135 | 378 | 65 | 312 | 2.93e-44 | 158 |
Msa0721890 | AT3G14850.1 | 29.851 | 268 | 166 | 5 | 213 | 478 | 1 | 248 | 7.85e-43 | 152 |
Msa0721890 | AT2G14530.1 | 27.371 | 369 | 214 | 15 | 143 | 481 | 62 | 406 | 1.97e-41 | 153 |
Msa0721890 | AT5G64020.1 | 27.123 | 365 | 227 | 13 | 143 | 481 | 57 | 408 | 1.52e-40 | 150 |
Msa0721890 | AT5G15890.1 | 28.814 | 354 | 217 | 10 | 140 | 477 | 184 | 518 | 1.67e-40 | 153 |
Msa0721890 | AT3G02440.2 | 30.081 | 369 | 206 | 15 | 143 | 484 | 135 | 478 | 2.57e-40 | 152 |
Msa0721890 | AT3G02440.1 | 30.081 | 369 | 206 | 15 | 143 | 484 | 127 | 470 | 2.72e-40 | 151 |
Msa0721890 | AT5G15900.2 | 29.282 | 362 | 218 | 13 | 141 | 481 | 84 | 428 | 6.46e-39 | 147 |
Msa0721890 | AT5G15900.1 | 29.282 | 362 | 218 | 13 | 141 | 481 | 65 | 409 | 6.54e-39 | 147 |
Msa0721890 | AT5G20680.6 | 27.095 | 358 | 230 | 11 | 140 | 481 | 115 | 457 | 5.63e-37 | 142 |
Msa0721890 | AT2G37720.1 | 26.761 | 355 | 233 | 11 | 141 | 481 | 141 | 482 | 7.52e-37 | 142 |
Msa0721890 | AT5G20680.2 | 27.500 | 360 | 226 | 12 | 140 | 481 | 191 | 533 | 2.09e-36 | 141 |
Msa0721890 | AT5G20680.4 | 27.500 | 360 | 226 | 12 | 140 | 481 | 209 | 551 | 2.75e-36 | 141 |
Msa0721890 | AT5G20680.1 | 27.500 | 360 | 226 | 12 | 140 | 481 | 209 | 551 | 2.75e-36 | 141 |
Msa0721890 | AT5G20680.3 | 27.500 | 360 | 226 | 12 | 140 | 481 | 209 | 551 | 2.75e-36 | 141 |
Msa0721890 | AT5G20680.5 | 27.500 | 360 | 226 | 12 | 140 | 481 | 209 | 551 | 2.75e-36 | 141 |
Msa0721890 | AT3G28150.1 | 25.833 | 360 | 237 | 11 | 138 | 481 | 65 | 410 | 1.16e-34 | 134 |
Msa0721890 | AT5G64470.4 | 30.385 | 260 | 157 | 9 | 143 | 388 | 55 | 304 | 2.06e-31 | 123 |
Msa0721890 | AT5G64470.1 | 30.798 | 263 | 152 | 11 | 143 | 388 | 55 | 304 | 2.52e-31 | 123 |
Find 118 sgRNAs with CRISPR-Local
Find 320 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTGATATATTTGATGGAAAT+TGG | 0.190418 | 5_1:-18944169 | Msa0721890:CDS |
AAACGTGTTTATGAAATTTC+AGG | 0.201586 | 5_1:-18942809 | Msa0721890:CDS |
TCGACTTTCAAAGGCGTAAA+TGG | 0.207010 | 5_1:-18942599 | Msa0721890:CDS |
GATACTCAGTTACTCATTTC+AGG | 0.227306 | 5_1:-18941934 | Msa0721890:intron |
GTGTTATCTGGTTTCACTTT+AGG | 0.230297 | 5_1:-18944539 | Msa0721890:CDS |
TTCAAAGCCTTATTATGATT+TGG | 0.236894 | 5_1:-18944135 | Msa0721890:CDS |
AGTCAAAATCTCCGCATATT+TGG | 0.243738 | 5_1:-18940242 | Msa0721890:three_prime_UTR |
CGAAGTTAATGTTTCAAATC+AGG | 0.253193 | 5_1:-18944363 | Msa0721890:CDS |
ATGAAGAAGTGAAAGAGTTT+TGG | 0.279015 | 5_1:+18944627 | None:intergenic |
GACATTAAGATTGGATTTGA+TGG | 0.301012 | 5_1:-18942567 | Msa0721890:CDS |
TCAAAGCCTTATTATGATTT+GGG | 0.301206 | 5_1:-18944134 | Msa0721890:CDS |
CACTTCTTCATCTGCTTCAA+TGG | 0.303658 | 5_1:-18944615 | Msa0721890:exon |
GTTGGAGGAAGGAGATAAAT+TGG | 0.305632 | 5_1:+18944439 | None:intergenic |
AAGTGATCTCCTTTATATAT+TGG | 0.322525 | 5_1:+18940547 | None:intergenic |
CACAGAAGAAAAGTGTTATC+TGG | 0.322787 | 5_1:-18944551 | Msa0721890:CDS |
CATTGAAAACTTGGGCTAGA+TGG | 0.333275 | 5_1:-18942003 | Msa0721890:CDS |
CAAGAACCCAAATCATAATA+AGG | 0.338110 | 5_1:+18944128 | None:intergenic |
CCGGAACATGTGGGAGTCTA+TGG | 0.342268 | 5_1:-18942864 | Msa0721890:CDS |
TAAACATAAAGATAATAAAA+AGG | 0.350467 | 5_1:+18939965 | None:intergenic |
AGGGGTGGGCAATGGAATTC+AGG | 0.361754 | 5_1:-18940595 | Msa0721890:CDS |
GTCATTTGAGACATTAAGAT+TGG | 0.366650 | 5_1:-18942576 | Msa0721890:CDS |
GTGATTATGTTAAGTGGAAA+TGG | 0.367043 | 5_1:-18944055 | Msa0721890:CDS |
CACTTAACATAATCACTATC+AGG | 0.372017 | 5_1:+18944062 | None:intergenic |
TTCTTGTCCATTTGTGGATA+GGG | 0.377871 | 5_1:-18944111 | Msa0721890:CDS |
CATCCAGAACTTTGAGTCTT+GGG | 0.381940 | 5_1:+18942038 | None:intergenic |
TATTCCATTCTGTATATTGA+AGG | 0.390229 | 5_1:+18940412 | None:intergenic |
CTTTGAGTCTTGGGTATACA+TGG | 0.392628 | 5_1:+18942047 | None:intergenic |
TATTCCTTGGTTTCCACAAA+AGG | 0.397285 | 5_1:-18940199 | Msa0721890:three_prime_UTR |
GCATCCAGAACTTTGAGTCT+TGG | 0.407081 | 5_1:+18942037 | None:intergenic |
ATACAAGGGCATTGAAAACT+TGG | 0.409561 | 5_1:-18942012 | Msa0721890:CDS |
CTTGGAATATCACAACCATT+TGG | 0.409864 | 5_1:+18944029 | None:intergenic |
GAAACCGAGCCAATATATAA+AGG | 0.409904 | 5_1:-18940556 | Msa0721890:CDS |
TTTCAGTAAAATTCCCCAAA+AGG | 0.410193 | 5_1:+18944327 | None:intergenic |
CCATAGACTCCCACATGTTC+CGG | 0.410438 | 5_1:+18942864 | None:intergenic |
TTTGGGTTCTTGTCCATTTG+TGG | 0.413859 | 5_1:-18944117 | Msa0721890:CDS |
GGAAATATCCGTCGAAAATG+AGG | 0.416620 | 5_1:-18940522 | Msa0721890:CDS |
ATACCCAAGACTCAAAGTTC+TGG | 0.418715 | 5_1:-18942041 | Msa0721890:CDS |
AGCATAGAGTAATTCATTCC+AGG | 0.420171 | 5_1:+18940312 | None:intergenic |
GTTCTTGTCCATTTGTGGAT+AGG | 0.420276 | 5_1:-18944112 | Msa0721890:CDS |
CATGATACGTGGAAGTTGTC+TGG | 0.431390 | 5_1:+18942543 | None:intergenic |
CTGATTTGAAACATTAACTT+CGG | 0.431794 | 5_1:+18944364 | None:intergenic |
AACAAATTCTACAGCTATCA+TGG | 0.433157 | 5_1:+18940068 | None:intergenic |
ATATTGGCTCGGTTTCTTTG+TGG | 0.436211 | 5_1:+18940563 | None:intergenic |
AGCACCAATGGCTACAATCT+TGG | 0.441484 | 5_1:+18940353 | None:intergenic |
TGATATATTTGATGGAAATT+GGG | 0.441698 | 5_1:-18944168 | Msa0721890:CDS |
TGATTTGAAACATTAACTTC+GGG | 0.450347 | 5_1:+18944365 | None:intergenic |
TTCAGTAAAATTCCCCAAAA+GGG | 0.454323 | 5_1:+18944328 | None:intergenic |
CTTATGTTCATATATATAAC+CGG | 0.456964 | 5_1:+18940466 | None:intergenic |
TGTAGCCATTGGTGCTTACC+AGG | 0.457279 | 5_1:-18940346 | Msa0721890:CDS |
GAGATCATAGTCTTCAATAC+AGG | 0.459035 | 5_1:-18942515 | Msa0721890:CDS |
ACTCTTCTTCATTCTCTGAA+TGG | 0.459484 | 5_1:-18944475 | Msa0721890:CDS |
TCTAATGGGGTTGATAAAGT+TGG | 0.459908 | 5_1:-18944281 | Msa0721890:CDS |
GAAAAGTGTGATATATTTGA+TGG | 0.462264 | 5_1:-18944176 | Msa0721890:CDS |
ATGGTTTCAGGGGTGGGCAA+TGG | 0.469728 | 5_1:-18940603 | Msa0721890:intron |
TCGTTGGGGATTCACTGAAC+CGG | 0.469894 | 5_1:-18942883 | Msa0721890:CDS |
CTTCATCTGCTTCAATGGAA+TGG | 0.471746 | 5_1:-18944610 | Msa0721890:exon |
TTCAACGCATGTATATTCCT+TGG | 0.472754 | 5_1:-18940212 | Msa0721890:three_prime_UTR |
TTTCTTCTGTGTGATGAAAA+GGG | 0.473485 | 5_1:+18944563 | None:intergenic |
CTGATAGTGATTATGTTAAG+TGG | 0.479197 | 5_1:-18944061 | Msa0721890:CDS |
TCAAAATCCCTATCCACAAA+TGG | 0.480614 | 5_1:+18944104 | None:intergenic |
AGTAATTCATTCCAGGTATC+CGG | 0.481676 | 5_1:+18940319 | None:intergenic |
TACCAGGAGTACCGGATACC+TGG | 0.483798 | 5_1:-18940330 | Msa0721890:CDS |
AAACATGAATTTAAGAAGAA+AGG | 0.483840 | 5_1:-18942785 | Msa0721890:CDS |
TATATAAAGGAGATCACTTA+CGG | 0.488578 | 5_1:-18940543 | Msa0721890:CDS |
CCATTCTGTATATTGAAGGA+TGG | 0.494396 | 5_1:+18940416 | None:intergenic |
CTGTAGAATTTGTTGATCAA+AGG | 0.496586 | 5_1:-18940059 | Msa0721890:three_prime_UTR |
TTCCAGGTATCCGGTACTCC+TGG | 0.496812 | 5_1:+18940328 | None:intergenic |
GAAGTTAATGTTTCAAATCA+GGG | 0.499829 | 5_1:-18944362 | Msa0721890:CDS |
CGACTTTCAAAGGCGTAAAT+GGG | 0.502002 | 5_1:-18942598 | Msa0721890:CDS |
TCTTCAATACAGGGCATTGG+TGG | 0.506186 | 5_1:-18942505 | Msa0721890:CDS |
ATTCCTTGGTTTCCACAAAA+GGG | 0.507244 | 5_1:-18940198 | Msa0721890:three_prime_UTR |
GTCGACTCTTGAACAATGAA+TGG | 0.508559 | 5_1:+18942617 | None:intergenic |
GAAGGAGATAAATTGGAGAA+TGG | 0.510907 | 5_1:+18944446 | None:intergenic |
GTTGGGAAAGGTGAAATTGA+TGG | 0.511725 | 5_1:-18944248 | Msa0721890:CDS |
GGACCCACGAGAAAACATCT+AGG | 0.516765 | 5_1:-18942484 | Msa0721890:CDS |
ATCTCCTTTATATATTGGCT+CGG | 0.524264 | 5_1:+18940552 | None:intergenic |
GAAATATCCGTCGAAAATGA+GGG | 0.532898 | 5_1:-18940521 | Msa0721890:CDS |
GTTCAAGAGTCGACTTTCAA+AGG | 0.533529 | 5_1:-18942608 | Msa0721890:CDS |
CATTCTGTATATTGAAGGAT+GGG | 0.533672 | 5_1:+18940417 | None:intergenic |
TGTCATTGATGCTTTGACGT+AGG | 0.535681 | 5_1:+18942834 | None:intergenic |
GAGAGTAGATGAGACTTGAG+AGG | 0.535793 | 5_1:+18939895 | None:intergenic |
GTGATTGAAACGTTGGAGGA+AGG | 0.545186 | 5_1:+18944428 | None:intergenic |
TGGAAAAGTTGCGAGGGCAG+AGG | 0.548671 | 5_1:-18942913 | Msa0721890:CDS |
GTGGAAGAGAATGTGAAAGA+TGG | 0.550163 | 5_1:-18944209 | Msa0721890:CDS |
GTACTCCTGGTAAGCACCAA+TGG | 0.553803 | 5_1:+18940341 | None:intergenic |
TGGAAGAGAATGTGAAAGAT+GGG | 0.554631 | 5_1:-18944208 | Msa0721890:CDS |
AGAGAAGACTATTATCAAGA+AGG | 0.560808 | 5_1:-18942073 | Msa0721890:CDS |
TTATATATATGAACATAAGT+AGG | 0.561203 | 5_1:-18940462 | Msa0721890:CDS |
TTGGTGCTTACCAGGAGTAC+CGG | 0.561338 | 5_1:-18940338 | Msa0721890:CDS |
CAAATGGTTGTGATATTCCA+AGG | 0.562662 | 5_1:-18944028 | Msa0721890:intron |
CCATCCTTCAATATACAGAA+TGG | 0.565344 | 5_1:-18940416 | Msa0721890:CDS |
AAGTTCTGGATGCATATACA+AGG | 0.565697 | 5_1:-18942027 | Msa0721890:CDS |
ATTCACTGAACCGGAACATG+TGG | 0.568896 | 5_1:-18942874 | Msa0721890:CDS |
AACACCAAGATTGTAGCCAT+TGG | 0.569035 | 5_1:-18940357 | Msa0721890:CDS |
ATGAGTGATTGAAACGTTGG+AGG | 0.569891 | 5_1:+18944424 | None:intergenic |
GACCCACGAGAAAACATCTA+GGG | 0.570532 | 5_1:-18942483 | Msa0721890:CDS |
AAGATGAGTGATTGAAACGT+TGG | 0.574729 | 5_1:+18944421 | None:intergenic |
TACAAGGGCATTGAAAACTT+GGG | 0.579554 | 5_1:-18942011 | Msa0721890:CDS |
AAAGTTGCGAGGGCAGAGGT+TGG | 0.587073 | 5_1:-18942909 | Msa0721890:CDS |
AAGTGGAAATGGAAGCCAAA+TGG | 0.593408 | 5_1:-18944044 | Msa0721890:CDS |
TAGTCTTCAATACAGGGCAT+TGG | 0.601503 | 5_1:-18942508 | Msa0721890:CDS |
TGGGAATTTGAGTGGTTCTG+TGG | 0.603331 | 5_1:-18944228 | Msa0721890:CDS |
AAAAGTGTGTGTTCGTGTGT+GGG | 0.605165 | 5_1:+18944677 | None:intergenic |
ATCTTGGTGTTGCTCCGCGG+TGG | 0.607543 | 5_1:+18940369 | None:intergenic |
GAAATTGATGGGAATTTGAG+TGG | 0.608110 | 5_1:-18944236 | Msa0721890:CDS |
CATCCCAAAGATGAAAACTC+CGG | 0.613967 | 5_1:-18940485 | Msa0721890:CDS |
TGACAATTGTGTCTGCAACT+AGG | 0.619900 | 5_1:+18940106 | None:intergenic |
TTGGGAAAGGTGAAATTGAT+GGG | 0.620476 | 5_1:-18944247 | Msa0721890:CDS |
AGATCATAGTCTTCAATACA+GGG | 0.637046 | 5_1:-18942514 | Msa0721890:CDS |
TTCACTGAACCGGAACATGT+GGG | 0.670183 | 5_1:-18942873 | Msa0721890:CDS |
ACAATCTTGGTGTTGCTCCG+CGG | 0.671013 | 5_1:+18940366 | None:intergenic |
GATCTCAGCATCATGATACG+TGG | 0.681864 | 5_1:+18942532 | None:intergenic |
AGTTCTGGATGCATATACAA+GGG | 0.687105 | 5_1:-18942026 | Msa0721890:CDS |
GGTGGGCAATGGAATTCAGG+AGG | 0.696740 | 5_1:-18940592 | Msa0721890:CDS |
TGAAACTTGAACCAAATATG+CGG | 0.697434 | 5_1:+18940231 | None:intergenic |
ACCCACGAGAAAACATCTAG+GGG | 0.706296 | 5_1:-18942482 | Msa0721890:CDS |
AGAAGCAGAACGAACCACCG+CGG | 0.720633 | 5_1:-18940383 | Msa0721890:CDS |
CCCACGAGAAAACATCTAGG+GGG | 0.766315 | 5_1:-18942481 | Msa0721890:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TAACCTTTTTTTTTTTTTTT+GGG | - | chr5_1:18941261-18941280 | Msa0721890:intron | 10.0% |
!! | AAAAATCAAATTAATATTGT+AGG | - | chr5_1:18943743-18943762 | Msa0721890:intron | 10.0% |
!! | TAAACATAAAGATAATAAAA+AGG | + | chr5_1:18944674-18944693 | None:intergenic | 10.0% |
!!! | AATTTTAATGTTGTTACTTT+AGG | - | chr5_1:18940690-18940709 | Msa0721890:intron | 15.0% |
!! | ATAGTAAATTAAGAGAAAAA+TGG | - | chr5_1:18940759-18940778 | Msa0721890:intron | 15.0% |
!! | AATAAGTTTGAATAATTTGA+AGG | - | chr5_1:18941192-18941211 | Msa0721890:intron | 15.0% |
!!! | GTAACCTTTTTTTTTTTTTT+TGG | - | chr5_1:18941260-18941279 | Msa0721890:intron | 15.0% |
!!! | AACCTTTTTTTTTTTTTTTG+GGG | - | chr5_1:18941262-18941281 | Msa0721890:intron | 15.0% |
!! | AAACATGATTCTAAATTAAA+AGG | - | chr5_1:18941366-18941385 | Msa0721890:intron | 15.0% |
!!! | TCTCATTAAAATTTTGTTTT+TGG | - | chr5_1:18941953-18941972 | Msa0721890:CDS | 15.0% |
!!! | TTTTGTTTTTGGTAATTTAT+AGG | - | chr5_1:18941964-18941983 | Msa0721890:CDS | 15.0% |
!! | AAAATTTCATGTTAAAATTC+AGG | + | chr5_1:18942411-18942430 | None:intergenic | 15.0% |
!!! | TTTATATATTGTTTGAAACA+TGG | - | chr5_1:18942832-18942851 | Msa0721890:CDS | 15.0% |
!! | TATAGGATTAATACTTTATT+TGG | + | chr5_1:18943077-18943096 | None:intergenic | 15.0% |
!!! | TTTTTCAGGTTTTAATTTAT+AGG | + | chr5_1:18943094-18943113 | None:intergenic | 15.0% |
!!! | TTTTTAAAATGAGGAAATTT+CGG | + | chr5_1:18943383-18943402 | None:intergenic | 15.0% |
!!! | AAATTTCCTCATTTTAAAAA+TGG | - | chr5_1:18943383-18943402 | Msa0721890:intron | 15.0% |
!! | TAATAATATGATGTTCAATT+TGG | + | chr5_1:18943722-18943741 | None:intergenic | 15.0% |
!!! | TACAATTTAAATTTTTGCAT+AGG | + | chr5_1:18943943-18943962 | None:intergenic | 15.0% |
!! | TTATATATATGAACATAAGT+AGG | - | chr5_1:18944174-18944193 | Msa0721890:CDS | 15.0% |
!! | TGATATATTTGATGGAAATT+GGG | - | chr5_1:18940468-18940487 | Msa0721890:CDS | 20.0% |
!! | TAGAAAATGCTTTATAGTTT+AGG | - | chr5_1:18940796-18940815 | Msa0721890:intron | 20.0% |
!! | ACAGATAAACAATTAGATAT+AGG | - | chr5_1:18941045-18941064 | Msa0721890:intron | 20.0% |
!!! | ACCTTTTTTTTTTTTTTTGG+GGG | - | chr5_1:18941263-18941282 | Msa0721890:intron | 20.0% |
!! | GTAAATAAAGATTCTATTGA+AGG | + | chr5_1:18941318-18941337 | None:intergenic | 20.0% |
!! | TTAGAATCATGTTTATACTT+TGG | + | chr5_1:18941360-18941379 | None:intergenic | 20.0% |
!! | AAACATGAATTTAAGAAGAA+AGG | - | chr5_1:18941851-18941870 | Msa0721890:intron | 20.0% |
!!! | AATAAGCAATTTTGGAAAAA+AGG | - | chr5_1:18942509-18942528 | Msa0721890:CDS | 20.0% |
!!! | GTAAGAATATTTTTGCAAAA+GGG | + | chr5_1:18942913-18942932 | None:intergenic | 20.0% |
!!! | AGTAAGAATATTTTTGCAAA+AGG | + | chr5_1:18942914-18942933 | None:intergenic | 20.0% |
!!! | GTGCTTTAATATTTTTTTTC+AGG | + | chr5_1:18943108-18943127 | None:intergenic | 20.0% |
!! | AAAAAAATATTAAAGCACAC+TGG | - | chr5_1:18943110-18943129 | Msa0721890:intron | 20.0% |
!! | AAAAAATATTAAAGCACACT+GGG | - | chr5_1:18943111-18943130 | Msa0721890:intron | 20.0% |
!!! | AATCTAAGTCCTTTATTTTT+TGG | - | chr5_1:18943183-18943202 | Msa0721890:intron | 20.0% |
!!! | AGTTTAAAGCCAAAAAATAA+AGG | + | chr5_1:18943195-18943214 | None:intergenic | 20.0% |
!! | TTCATTATTTGTAGTAGAAA+AGG | + | chr5_1:18943296-18943315 | None:intergenic | 20.0% |
!! | TCTACTACAAATAATGAAAT+TGG | - | chr5_1:18943298-18943317 | Msa0721890:intron | 20.0% |
!! | CTACTACAAATAATGAAATT+GGG | - | chr5_1:18943299-18943318 | Msa0721890:intron | 20.0% |
!!! | CCTAAATATAATTTTCAAGT+AGG | + | chr5_1:18943409-18943428 | None:intergenic | 20.0% |
!! | CCTACTTGAAAATTATATTT+AGG | - | chr5_1:18943406-18943425 | Msa0721890:intron | 20.0% |
!!! | ACAAAGAGTATATTAACATA+TGG | + | chr5_1:18943456-18943475 | None:intergenic | 20.0% |
!!! | TTTGTTTCTTTTTTGTTAAG+AGG | - | chr5_1:18943471-18943490 | Msa0721890:intron | 20.0% |
!! | ATCCAGCAATATATTATAAT+AGG | + | chr5_1:18943638-18943657 | None:intergenic | 20.0% |
!! | TGTATTGTTGTCAAATTAAT+TGG | - | chr5_1:18943787-18943806 | Msa0721890:intron | 20.0% |
!! | CTTATGTTCATATATATAAC+CGG | + | chr5_1:18944173-18944192 | None:intergenic | 20.0% |
!!! | TGGAAAAATGAAAGTGTTTT+GGG | + | chr5_1:18939992-18940011 | None:intergenic | 25.0% |
!!! | TTGGAAAAATGAAAGTGTTT+TGG | + | chr5_1:18939993-18940012 | None:intergenic | 25.0% |
!! | TGATTTGAAACATTAACTTC+GGG | + | chr5_1:18940274-18940293 | None:intergenic | 25.0% |
!! | CTGATTTGAAACATTAACTT+CGG | + | chr5_1:18940275-18940294 | None:intergenic | 25.0% |
! | GAAGTTAATGTTTCAAATCA+GGG | - | chr5_1:18940274-18940293 | Msa0721890:CDS | 25.0% |
!! | AATGTGAGTTTTCAATCTAA+TGG | - | chr5_1:18940340-18940359 | Msa0721890:CDS | 25.0% |
!! | ATGTGAGTTTTCAATCTAAT+GGG | - | chr5_1:18940341-18940360 | Msa0721890:CDS | 25.0% |
!! | GAAAAGTGTGATATATTTGA+TGG | - | chr5_1:18940460-18940479 | Msa0721890:CDS | 25.0% |
! | GTGATATATTTGATGGAAAT+TGG | - | chr5_1:18940467-18940486 | Msa0721890:CDS | 25.0% |
!!! | TTCAAAGCCTTATTATGATT+TGG | - | chr5_1:18940501-18940520 | Msa0721890:CDS | 25.0% |
!!! | TCAAAGCCTTATTATGATTT+GGG | - | chr5_1:18940502-18940521 | Msa0721890:CDS | 25.0% |
!!! | GATTTTGATTGTCATCTTAA+TGG | - | chr5_1:18940547-18940566 | Msa0721890:CDS | 25.0% |
! | CTTTATAGTTTAGGAAACAA+AGG | - | chr5_1:18940805-18940824 | Msa0721890:intron | 25.0% |
!! | AGGAAACAAAGGTATATAAT+AGG | - | chr5_1:18940816-18940835 | Msa0721890:intron | 25.0% |
! | AGGTATATAATAGGAAGATA+AGG | - | chr5_1:18940825-18940844 | Msa0721890:intron | 25.0% |
!!! | TGCAATAGTAAAAGTTTTAG+AGG | - | chr5_1:18940863-18940882 | Msa0721890:intron | 25.0% |
!!! | CCTTTTTTTTTTTTTTTGGG+GGG | - | chr5_1:18941264-18941283 | Msa0721890:intron | 25.0% |
!!! | CTTTTTTTTTTTTTTTGGGG+GGG | - | chr5_1:18941265-18941284 | Msa0721890:intron | 25.0% |
!! | AAATTTAGTTCCTTATCACA+TGG | + | chr5_1:18941424-18941443 | None:intergenic | 25.0% |
!! | AACAGAGTTTGTTTGAATTA+GGG | + | chr5_1:18941513-18941532 | None:intergenic | 25.0% |
!! | AAACAGAGTTTGTTTGAATT+AGG | + | chr5_1:18941514-18941533 | None:intergenic | 25.0% |
!! | AATTCAAACAAACTCTGTTT+TGG | - | chr5_1:18941514-18941533 | Msa0721890:intron | 25.0% |
! | GATAGCATTCATATATTCTA+GGG | + | chr5_1:18941635-18941654 | None:intergenic | 25.0% |
! | AAACGTGTTTATGAAATTTC+AGG | - | chr5_1:18941827-18941846 | Msa0721890:intron | 25.0% |
! | TCCGAGTATAAAACTTATAA+TGG | - | chr5_1:18941928-18941947 | Msa0721890:intron | 25.0% |
!!! | GCCATTATAAGTTTTATACT+CGG | + | chr5_1:18941932-18941951 | None:intergenic | 25.0% |
!! | TATTGTTTTCTTCCTTTACA+TGG | - | chr5_1:18942773-18942792 | Msa0721890:CDS | 25.0% |
!!! | TTAATCTGCATGCTTTTTAT+TGG | - | chr5_1:18942944-18942963 | Msa0721890:intron | 25.0% |
!!! | TTTTTTGAAGTTCAGAGTAA+GGG | + | chr5_1:18943029-18943048 | None:intergenic | 25.0% |
!!! | ATTTTTTGAAGTTCAGAGTA+AGG | + | chr5_1:18943030-18943049 | None:intergenic | 25.0% |
!! | AGGATTAATACTTTATTTGG+AGG | + | chr5_1:18943074-18943093 | None:intergenic | 25.0% |
! | AAAAATATTAAAGCACACTG+GGG | - | chr5_1:18943112-18943131 | Msa0721890:intron | 25.0% |
! | AGTATATTAACATATGGTCA+GGG | + | chr5_1:18943450-18943469 | None:intergenic | 25.0% |
!! | GTGATTATATCTCTAGATTT+TGG | + | chr5_1:18943545-18943564 | None:intergenic | 25.0% |
! | TATTATAATAGGAGCAAAAG+CGG | + | chr5_1:18943627-18943646 | None:intergenic | 25.0% |
! | CTCCTATTATAATATATTGC+TGG | - | chr5_1:18943633-18943652 | Msa0721890:intron | 25.0% |
!!! | CTTTAGCTATTTTATATGAC+AGG | - | chr5_1:18943665-18943684 | Msa0721890:intron | 25.0% |
! | AGAATCTGAATTAAACATAG+CGG | + | chr5_1:18943899-18943918 | None:intergenic | 25.0% |
! | TTTAATTCAGATTCTCACAT+TGG | - | chr5_1:18943904-18943923 | Msa0721890:intron | 25.0% |
!!! | TTTTTTGCACCATATTTATC+TGG | - | chr5_1:18943979-18943998 | Msa0721890:intron | 25.0% |
! | AACAGTGTTAAAATTCAACA+TGG | + | chr5_1:18944009-18944028 | None:intergenic | 25.0% |
!!! | AATTTTAACACTGTTTGACA+TGG | - | chr5_1:18944014-18944033 | Msa0721890:intron | 25.0% |
! | AAGTGATCTCCTTTATATAT+TGG | + | chr5_1:18944092-18944111 | None:intergenic | 25.0% |
! | TATATAAAGGAGATCACTTA+CGG | - | chr5_1:18944093-18944112 | Msa0721890:CDS | 25.0% |
! | TATTCCATTCTGTATATTGA+AGG | + | chr5_1:18944227-18944246 | None:intergenic | 25.0% |
! | TATGCTTCTCTCTTAAAAAA+TGG | - | chr5_1:18944341-18944360 | Msa0721890:CDS | 25.0% |
! | TCTCTCTTAAAAAATGGTAA+AGG | - | chr5_1:18944347-18944366 | Msa0721890:CDS | 25.0% |
! | CTCTCTTAAAAAATGGTAAA+GGG | - | chr5_1:18944348-18944367 | Msa0721890:CDS | 25.0% |
! | TAAAAAATGGTAAAGGGAAT+TGG | - | chr5_1:18944354-18944373 | Msa0721890:CDS | 25.0% |
! | ATGAAGAAGTGAAAGAGTTT+TGG | + | chr5_1:18940012-18940031 | None:intergenic | 30.0% |
TTTCTTCTGTGTGATGAAAA+GGG | + | chr5_1:18940076-18940095 | None:intergenic | 30.0% | |
! | TTTTCTTCTGTGTGATGAAA+AGG | + | chr5_1:18940077-18940096 | None:intergenic | 30.0% |
CGAAGTTAATGTTTCAAATC+AGG | - | chr5_1:18940273-18940292 | Msa0721890:CDS | 30.0% | |
TTCAGTAAAATTCCCCAAAA+GGG | + | chr5_1:18940311-18940330 | None:intergenic | 30.0% | |
TTTCAGTAAAATTCCCCAAA+AGG | + | chr5_1:18940312-18940331 | None:intergenic | 30.0% | |
! | TTGGGGAATTTTACTGAAAA+TGG | - | chr5_1:18940313-18940332 | Msa0721890:CDS | 30.0% |
! | TGTGAGTTTTCAATCTAATG+GGG | - | chr5_1:18940342-18940361 | Msa0721890:CDS | 30.0% |
! | AAAGTTGGAAACTTTTCTGT+TGG | - | chr5_1:18940370-18940389 | Msa0721890:CDS | 30.0% |
! | AAGTTGGAAACTTTTCTGTT+GGG | - | chr5_1:18940371-18940390 | Msa0721890:CDS | 30.0% |
CAAGAACCCAAATCATAATA+AGG | + | chr5_1:18940511-18940530 | None:intergenic | 30.0% | |
CACTTAACATAATCACTATC+AGG | + | chr5_1:18940577-18940596 | None:intergenic | 30.0% | |
! | CTGATAGTGATTATGTTAAG+TGG | - | chr5_1:18940575-18940594 | Msa0721890:CDS | 30.0% |
GTGATTATGTTAAGTGGAAA+TGG | - | chr5_1:18940581-18940600 | Msa0721890:CDS | 30.0% | |
TGCATACATTATACATACCT+TGG | + | chr5_1:18940628-18940647 | None:intergenic | 30.0% | |
!! | TAGGTGTTGAATTGAGTTAA+TGG | - | chr5_1:18941064-18941083 | Msa0721890:intron | 30.0% |
TTAACTTTCACCTCTTGTAA+GGG | + | chr5_1:18941173-18941192 | None:intergenic | 30.0% | |
! | TTTAACTTTCACCTCTTGTA+AGG | + | chr5_1:18941174-18941193 | None:intergenic | 30.0% |
CCCCCCAAAAAAAAAAAAAA+AGG | + | chr5_1:18941267-18941286 | None:intergenic | 30.0% | |
! | ATACAAGTAAACAAGCATTG+TGG | + | chr5_1:18941292-18941311 | None:intergenic | 30.0% |
GTGATAAGGAACTAAATTTG+AGG | - | chr5_1:18941425-18941444 | Msa0721890:intron | 30.0% | |
GAGTGTTAATAATGATCAGT+AGG | - | chr5_1:18941536-18941555 | Msa0721890:intron | 30.0% | |
TTAAAATTACTGTCGCTGTT+TGG | + | chr5_1:18941611-18941630 | None:intergenic | 30.0% | |
GGATAGCATTCATATATTCT+AGG | + | chr5_1:18941636-18941655 | None:intergenic | 30.0% | |
!! | TTTGAATGCAACTGATTTTC+TGG | - | chr5_1:18941703-18941722 | Msa0721890:intron | 30.0% |
TACTCGGAATAAAAATAGCA+AGG | + | chr5_1:18941916-18941935 | None:intergenic | 30.0% | |
! | GTCATTTGAGACATTAAGAT+TGG | - | chr5_1:18942060-18942079 | Msa0721890:CDS | 30.0% |
GACATTAAGATTGGATTTGA+TGG | - | chr5_1:18942069-18942088 | Msa0721890:CDS | 30.0% | |
AGATCATAGTCTTCAATACA+GGG | - | chr5_1:18942122-18942141 | Msa0721890:intron | 30.0% | |
TTCAAATATCACTTGAAGCA+TGG | + | chr5_1:18942220-18942239 | None:intergenic | 30.0% | |
CTTCAAGTGATATTTGAAGA+TGG | - | chr5_1:18942222-18942241 | Msa0721890:intron | 30.0% | |
ACACACATGATAATTTGGAA+TGG | + | chr5_1:18942289-18942308 | None:intergenic | 30.0% | |
GTTGTACACACATGATAATT+TGG | + | chr5_1:18942294-18942313 | None:intergenic | 30.0% | |
!! | TGTTTTCACTTTTGTTTCAC+TGG | - | chr5_1:18942460-18942479 | Msa0721890:intron | 30.0% |
! | GTGATCGTAATAAGCAATTT+TGG | - | chr5_1:18942501-18942520 | Msa0721890:CDS | 30.0% |
!!! | GTTTTGATTTTGTTGTCAAC+TGG | - | chr5_1:18942531-18942550 | Msa0721890:CDS | 30.0% |
AGAGAAGACTATTATCAAGA+AGG | - | chr5_1:18942563-18942582 | Msa0721890:CDS | 30.0% | |
ATAGCAAGTCCAGATTATTT+CGG | + | chr5_1:18942756-18942775 | None:intergenic | 30.0% | |
!!! | AGTAGGCCATTTTTAAAATG+AGG | + | chr5_1:18943392-18943411 | None:intergenic | 30.0% |
GAGTATATTAACATATGGTC+AGG | + | chr5_1:18943451-18943470 | None:intergenic | 30.0% | |
GTTTGAATATTGCACAAGAT+TGG | - | chr5_1:18943508-18943527 | Msa0721890:intron | 30.0% | |
AAATACCAGGTTCTTCATTA+AGG | + | chr5_1:18943860-18943879 | None:intergenic | 30.0% | |
! | ATCTCCTTTATATATTGGCT+CGG | + | chr5_1:18944087-18944106 | None:intergenic | 30.0% |
CATTCTGTATATTGAAGGAT+GGG | + | chr5_1:18944222-18944241 | None:intergenic | 30.0% | |
TGAAACTTGAACCAAATATG+CGG | + | chr5_1:18944408-18944427 | None:intergenic | 30.0% | |
AACAAATTCTACAGCTATCA+TGG | + | chr5_1:18944571-18944590 | None:intergenic | 30.0% | |
!! | CTGTAGAATTTGTTGATCAA+AGG | - | chr5_1:18944577-18944596 | Msa0721890:CDS | 30.0% |
!! | GAAAGTGTGTGCAATTTTGT+AGG | + | chr5_1:18939940-18939959 | None:intergenic | 35.0% |
!! | CACAGAAGAAAAGTGTTATC+TGG | - | chr5_1:18940085-18940104 | Msa0721890:three_prime_UTR | 35.0% |
! | GTGTTATCTGGTTTCACTTT+AGG | - | chr5_1:18940097-18940116 | Msa0721890:three_prime_UTR | 35.0% |
ACTCTTCTTCATTCTCTGAA+TGG | - | chr5_1:18940161-18940180 | Msa0721890:three_prime_UTR | 35.0% | |
GAAGGAGATAAATTGGAGAA+TGG | + | chr5_1:18940193-18940212 | None:intergenic | 35.0% | |
AAGATGAGTGATTGAAACGT+TGG | + | chr5_1:18940218-18940237 | None:intergenic | 35.0% | |
! | GGTTTTCAGAATACCCTTTT+GGG | - | chr5_1:18940295-18940314 | Msa0721890:CDS | 35.0% |
! | GTTTTCAGAATACCCTTTTG+GGG | - | chr5_1:18940296-18940315 | Msa0721890:CDS | 35.0% |
!! | TCTAATGGGGTTGATAAAGT+TGG | - | chr5_1:18940355-18940374 | Msa0721890:CDS | 35.0% |
TTGGGAAAGGTGAAATTGAT+GGG | - | chr5_1:18940389-18940408 | Msa0721890:CDS | 35.0% | |
GAAATTGATGGGAATTTGAG+TGG | - | chr5_1:18940400-18940419 | Msa0721890:CDS | 35.0% | |
TGGAAGAGAATGTGAAAGAT+GGG | - | chr5_1:18940428-18940447 | Msa0721890:CDS | 35.0% | |
TTCTTGTCCATTTGTGGATA+GGG | - | chr5_1:18940525-18940544 | Msa0721890:CDS | 35.0% | |
TCAAAATCCCTATCCACAAA+TGG | + | chr5_1:18940535-18940554 | None:intergenic | 35.0% | |
CTTGGAATATCACAACCATT+TGG | + | chr5_1:18940610-18940629 | None:intergenic | 35.0% | |
CAAATGGTTGTGATATTCCA+AGG | - | chr5_1:18940608-18940627 | Msa0721890:intron | 35.0% | |
CTCGTCATGATTCTAAATTC+GGG | + | chr5_1:18940925-18940944 | None:intergenic | 35.0% | |
CCTCGTCATGATTCTAAATT+CGG | + | chr5_1:18940926-18940945 | None:intergenic | 35.0% | |
TAGAATCATGACGAGGAAAT+TGG | - | chr5_1:18940930-18940949 | Msa0721890:intron | 35.0% | |
TACGATGAGAAACATCTGAA+TGG | + | chr5_1:18941098-18941117 | None:intergenic | 35.0% | |
TTACAGATTACCCTTACAAG+AGG | - | chr5_1:18941160-18941179 | Msa0721890:intron | 35.0% | |
! | TTTAGTTCCTTATCACATGG+TGG | + | chr5_1:18941421-18941440 | None:intergenic | 35.0% |
!! | ATTTTCTGGAAAAGTTGCGA+GGG | - | chr5_1:18941717-18941736 | Msa0721890:intron | 35.0% |
! | TGTCTACGCTTTTAGATTTG+AGG | - | chr5_1:18941874-18941893 | Msa0721890:intron | 35.0% |
GAGATCATAGTCTTCAATAC+AGG | - | chr5_1:18942121-18942140 | Msa0721890:intron | 35.0% | |
! | CACATGATAATTTGGAATGG+AGG | + | chr5_1:18942286-18942305 | None:intergenic | 35.0% |
!! | AAGTTCTGGATGCATATACA+AGG | - | chr5_1:18942609-18942628 | Msa0721890:CDS | 35.0% |
!! | AGTTCTGGATGCATATACAA+GGG | - | chr5_1:18942610-18942629 | Msa0721890:CDS | 35.0% |
!! | ATACAAGGGCATTGAAAACT+TGG | - | chr5_1:18942624-18942643 | Msa0721890:CDS | 35.0% |
!! | TACAAGGGCATTGAAAACTT+GGG | - | chr5_1:18942625-18942644 | Msa0721890:CDS | 35.0% |
GATACTCAGTTACTCATTTC+AGG | - | chr5_1:18942702-18942721 | Msa0721890:intron | 35.0% | |
TTCCAAAACCCGAAATAATC+TGG | - | chr5_1:18942744-18942763 | Msa0721890:intron | 35.0% | |
TAGCAAGTCCAGATTATTTC+GGG | + | chr5_1:18942755-18942774 | None:intergenic | 35.0% | |
!! | TCAATTTTCGAGCCATGTAA+AGG | + | chr5_1:18942788-18942807 | None:intergenic | 35.0% |
TTGAAACATGGCATGAAAAC+TGG | - | chr5_1:18942844-18942863 | Msa0721890:CDS | 35.0% | |
ACACAAGCTTATGACATTCA+TGG | - | chr5_1:18943264-18943283 | Msa0721890:intron | 35.0% | |
TTAGGCCTATAACTGTATTC+CGG | - | chr5_1:18943424-18943443 | Msa0721890:intron | 35.0% | |
CAGCATCAAATATTGAATGC+AGG | + | chr5_1:18943769-18943788 | None:intergenic | 35.0% | |
TTGTACCTTAATGAAGAACC+TGG | - | chr5_1:18943852-18943871 | Msa0721890:intron | 35.0% | |
AGTGGACACAATTAAATACC+AGG | + | chr5_1:18943873-18943892 | None:intergenic | 35.0% | |
TGGTATTTAATTGTGTCCAC+TGG | - | chr5_1:18943872-18943891 | Msa0721890:intron | 35.0% | |
CATGGCATACCAGATAAATA+TGG | + | chr5_1:18943991-18944010 | None:intergenic | 35.0% | |
GAAACCGAGCCAATATATAA+AGG | - | chr5_1:18944080-18944099 | Msa0721890:CDS | 35.0% | |
GAAATATCCGTCGAAAATGA+GGG | - | chr5_1:18944115-18944134 | Msa0721890:CDS | 35.0% | |
! | TAACCGGAGTTTTCATCTTT+GGG | + | chr5_1:18944157-18944176 | None:intergenic | 35.0% |
! | ATAACCGGAGTTTTCATCTT+TGG | + | chr5_1:18944158-18944177 | None:intergenic | 35.0% |
CCATTCTGTATATTGAAGGA+TGG | + | chr5_1:18944223-18944242 | None:intergenic | 35.0% | |
CCATCCTTCAATATACAGAA+TGG | - | chr5_1:18944220-18944239 | Msa0721890:CDS | 35.0% | |
AGTAATTCATTCCAGGTATC+CGG | + | chr5_1:18944320-18944339 | None:intergenic | 35.0% | |
AGCATAGAGTAATTCATTCC+AGG | + | chr5_1:18944327-18944346 | None:intergenic | 35.0% | |
AGTCAAAATCTCCGCATATT+TGG | - | chr5_1:18944394-18944413 | Msa0721890:CDS | 35.0% | |
TTCAACGCATGTATATTCCT+TGG | - | chr5_1:18944424-18944443 | Msa0721890:CDS | 35.0% | |
TATTCCTTGGTTTCCACAAA+AGG | - | chr5_1:18944437-18944456 | Msa0721890:CDS | 35.0% | |
ATTCCTTGGTTTCCACAAAA+GGG | - | chr5_1:18944438-18944457 | Msa0721890:CDS | 35.0% | |
! | AAATCAAAGACACCCTTTTG+TGG | + | chr5_1:18944453-18944472 | None:intergenic | 35.0% |
! | AAAAGTGTGTGTTCGTGTGT+GGG | + | chr5_1:18939962-18939981 | None:intergenic | 40.0% |
! | AAAAAGTGTGTGTTCGTGTG+TGG | + | chr5_1:18939963-18939982 | None:intergenic | 40.0% |
CACTTCTTCATCTGCTTCAA+TGG | - | chr5_1:18940021-18940040 | Msa0721890:three_prime_UTR | 40.0% | |
CTTCATCTGCTTCAATGGAA+TGG | - | chr5_1:18940026-18940045 | Msa0721890:three_prime_UTR | 40.0% | |
GTTGGAGGAAGGAGATAAAT+TGG | + | chr5_1:18940200-18940219 | None:intergenic | 40.0% | |
ATGAGTGATTGAAACGTTGG+AGG | + | chr5_1:18940215-18940234 | None:intergenic | 40.0% | |
! | GGGTTTTCAGAATACCCTTT+TGG | - | chr5_1:18940294-18940313 | Msa0721890:CDS | 40.0% |
! | GGAAACTTTTCTGTTGGGAA+AGG | - | chr5_1:18940376-18940395 | Msa0721890:CDS | 40.0% |
GTTGGGAAAGGTGAAATTGA+TGG | - | chr5_1:18940388-18940407 | Msa0721890:CDS | 40.0% | |
GTGGAAGAGAATGTGAAAGA+TGG | - | chr5_1:18940427-18940446 | Msa0721890:CDS | 40.0% | |
! | TTTGGGTTCTTGTCCATTTG+TGG | - | chr5_1:18940519-18940538 | Msa0721890:CDS | 40.0% |
GTTCTTGTCCATTTGTGGAT+AGG | - | chr5_1:18940524-18940543 | Msa0721890:CDS | 40.0% | |
AAGTGGAAATGGAAGCCAAA+TGG | - | chr5_1:18940592-18940611 | Msa0721890:CDS | 40.0% | |
! | CCGAATTTAGAATCATGACG+AGG | - | chr5_1:18940923-18940942 | Msa0721890:intron | 40.0% |
TAATCACTTCTACCGCCATA+AGG | + | chr5_1:18940978-18940997 | None:intergenic | 40.0% | |
ATCACATGGTGGTTAATGGA+GGG | + | chr5_1:18941410-18941429 | None:intergenic | 40.0% | |
TATCACATGGTGGTTAATGG+AGG | + | chr5_1:18941411-18941430 | None:intergenic | 40.0% | |
CCTTATCACATGGTGGTTAA+TGG | + | chr5_1:18941414-18941433 | None:intergenic | 40.0% | |
CCATTAACCACCATGTGATA+AGG | - | chr5_1:18941411-18941430 | Msa0721890:intron | 40.0% | |
TAGGGACGTTGAAGATTGAA+GGG | + | chr5_1:18941495-18941514 | None:intergenic | 40.0% | |
TTAGGGACGTTGAAGATTGA+AGG | + | chr5_1:18941496-18941515 | None:intergenic | 40.0% | |
AGGCTGTGCTTTAATGTCAT+TGG | - | chr5_1:18941556-18941575 | Msa0721890:intron | 40.0% | |
CTGTGCTTTAATGTCATTGG+CGG | - | chr5_1:18941559-18941578 | Msa0721890:intron | 40.0% | |
TCAGTTGCATTCAAACTGAG+AGG | + | chr5_1:18941698-18941717 | None:intergenic | 40.0% | |
!! | GATTTTCTGGAAAAGTTGCG+AGG | - | chr5_1:18941716-18941735 | Msa0721890:intron | 40.0% |
TGTCATTGATGCTTTGACGT+AGG | + | chr5_1:18941805-18941824 | None:intergenic | 40.0% | |
! | GTCGACTCTTGAACAATGAA+TGG | + | chr5_1:18942022-18942041 | None:intergenic | 40.0% |
! | GTTCAAGAGTCGACTTTCAA+AGG | - | chr5_1:18942028-18942047 | Msa0721890:CDS | 40.0% |
! | TCGACTTTCAAAGGCGTAAA+TGG | - | chr5_1:18942037-18942056 | Msa0721890:CDS | 40.0% |
! | CGACTTTCAAAGGCGTAAAT+GGG | - | chr5_1:18942038-18942057 | Msa0721890:CDS | 40.0% |
TAGTCTTCAATACAGGGCAT+TGG | - | chr5_1:18942128-18942147 | Msa0721890:intron | 40.0% | |
AATCGTGAGAACTGACTGTA+AGG | + | chr5_1:18942372-18942391 | None:intergenic | 40.0% | |
CTTTGAGTCTTGGGTATACA+TGG | + | chr5_1:18942592-18942611 | None:intergenic | 40.0% | |
ATACCCAAGACTCAAAGTTC+TGG | - | chr5_1:18942595-18942614 | Msa0721890:CDS | 40.0% | |
CATCCAGAACTTTGAGTCTT+GGG | + | chr5_1:18942601-18942620 | None:intergenic | 40.0% | |
! | CATTGAAAACTTGGGCTAGA+TGG | - | chr5_1:18942633-18942652 | Msa0721890:CDS | 40.0% |
! | CGAACACATGTTTTCTTCAG+AGG | - | chr5_1:18942680-18942699 | Msa0721890:intron | 40.0% |
!!! | GTCCAGATTATTTCGGGTTT+TGG | + | chr5_1:18942749-18942768 | None:intergenic | 40.0% |
TACATGGCTCGAAAATTGAC+TGG | - | chr5_1:18942789-18942808 | Msa0721890:CDS | 40.0% | |
AATATTAAAGCACACTGGGG+TGG | - | chr5_1:18943115-18943134 | Msa0721890:intron | 40.0% | |
AAGCTTGTGTTCAAATCTGC+TGG | + | chr5_1:18943254-18943273 | None:intergenic | 40.0% | |
TATTAACATATGGTCAGGGC+CGG | + | chr5_1:18943446-18943465 | None:intergenic | 40.0% | |
AATTAAACATAGCGGTCCAG+TGG | + | chr5_1:18943891-18943910 | None:intergenic | 40.0% | |
ACACTGTTTGACATGGTTTC+AGG | - | chr5_1:18944021-18944040 | Msa0721890:intron | 40.0% | |
CACTGTTTGACATGGTTTCA+GGG | - | chr5_1:18944022-18944041 | Msa0721890:intron | 40.0% | |
ACTGTTTGACATGGTTTCAG+GGG | - | chr5_1:18944023-18944042 | Msa0721890:intron | 40.0% | |
!! | ATATTGGCTCGGTTTCTTTG+TGG | + | chr5_1:18944076-18944095 | None:intergenic | 40.0% |
GGAAATATCCGTCGAAAATG+AGG | - | chr5_1:18944114-18944133 | Msa0721890:CDS | 40.0% | |
!! | TCTAAAGCCCTCATTTTCGA+CGG | + | chr5_1:18944125-18944144 | None:intergenic | 40.0% |
CATCCCAAAGATGAAAACTC+CGG | - | chr5_1:18944151-18944170 | Msa0721890:CDS | 40.0% | |
AACACCAAGATTGTAGCCAT+TGG | - | chr5_1:18944279-18944298 | Msa0721890:CDS | 40.0% | |
TGACAATTGTGTCTGCAACT+AGG | + | chr5_1:18944533-18944552 | None:intergenic | 40.0% | |
GTGATTGAAACGTTGGAGGA+AGG | + | chr5_1:18940211-18940230 | None:intergenic | 45.0% | |
! | TGGGAATTTGAGTGGTTCTG+TGG | - | chr5_1:18940408-18940427 | Msa0721890:CDS | 45.0% |
ACGAGGAAATTGGACGATAG+AGG | - | chr5_1:18940940-18940959 | Msa0721890:intron | 45.0% | |
AGGCAAGAATGTGTGCCTTA+TGG | - | chr5_1:18940960-18940979 | Msa0721890:intron | 45.0% | |
CAAGAATGTGTGCCTTATGG+CGG | - | chr5_1:18940963-18940982 | Msa0721890:intron | 45.0% | |
GGCGGTAGAAGTGATTATGA+AGG | - | chr5_1:18940981-18941000 | Msa0721890:intron | 45.0% | |
TCACATGGTGGTTAATGGAG+GGG | + | chr5_1:18941409-18941428 | None:intergenic | 45.0% | |
ATTCCCTTCCCATTAGGCTT+TGG | - | chr5_1:18941465-18941484 | Msa0721890:intron | 45.0% | |
AAGCCAAAGCCTAATGGGAA+GGG | + | chr5_1:18941471-18941490 | None:intergenic | 45.0% | |
TAAGCCAAAGCCTAATGGGA+AGG | + | chr5_1:18941472-18941491 | None:intergenic | 45.0% | |
AGGGTAAGCCAAAGCCTAAT+GGG | + | chr5_1:18941476-18941495 | None:intergenic | 45.0% | |
AAGGGTAAGCCAAAGCCTAA+TGG | + | chr5_1:18941477-18941496 | None:intergenic | 45.0% | |
ATTCACTGAACCGGAACATG+TGG | - | chr5_1:18941762-18941781 | Msa0721890:intron | 45.0% | |
TTCACTGAACCGGAACATGT+GGG | - | chr5_1:18941763-18941782 | Msa0721890:intron | 45.0% | |
CATGATACGTGGAAGTTGTC+TGG | + | chr5_1:18942096-18942115 | None:intergenic | 45.0% | |
GATCTCAGCATCATGATACG+TGG | + | chr5_1:18942107-18942126 | None:intergenic | 45.0% | |
!! | TCTTCAATACAGGGCATTGG+TGG | - | chr5_1:18942131-18942150 | Msa0721890:intron | 45.0% |
GACCCACGAGAAAACATCTA+GGG | - | chr5_1:18942153-18942172 | Msa0721890:intron | 45.0% | |
ACCCACGAGAAAACATCTAG+GGG | - | chr5_1:18942154-18942173 | Msa0721890:intron | 45.0% | |
CATGGAAACAGACAATGCGA+AGG | + | chr5_1:18942202-18942221 | None:intergenic | 45.0% | |
GCATCCAGAACTTTGAGTCT+TGG | + | chr5_1:18942602-18942621 | None:intergenic | 45.0% | |
!! | GACTGGTGTTACTTTGTAGC+TGG | - | chr5_1:18942806-18942825 | Msa0721890:CDS | 45.0% |
TGATGGTCAATGGCAAAGGT+GGG | + | chr5_1:18942877-18942896 | None:intergenic | 45.0% | |
TCAGTGATGGTCAATGGCAA+AGG | + | chr5_1:18942881-18942900 | None:intergenic | 45.0% | |
GTCAACTCAGTGATGGTCAA+TGG | + | chr5_1:18942887-18942906 | None:intergenic | 45.0% | |
GAGACTGTGAACCATATGCA+AGG | - | chr5_1:18942973-18942992 | Msa0721890:intron | 45.0% | |
GCTTGAACTGACCTTGCATA+TGG | + | chr5_1:18942987-18943006 | None:intergenic | 45.0% | |
ACGTGTCTCTCACAATTCAG+TGG | - | chr5_1:18943150-18943169 | Msa0721890:intron | 45.0% | |
GTGTTCAAATCTGCTGGAAG+AGG | + | chr5_1:18943248-18943267 | None:intergenic | 45.0% | |
TTTGACATGGTTTCAGGGGT+GGG | - | chr5_1:18944027-18944046 | Msa0721890:intron | 45.0% | |
! | TTGAAGGATGGGCGTCTTTT+CGG | + | chr5_1:18944211-18944230 | None:intergenic | 45.0% |
AGCACCAATGGCTACAATCT+TGG | + | chr5_1:18944286-18944305 | None:intergenic | 45.0% | |
! | ACACCCTTTTGTGGAAACCA+AGG | + | chr5_1:18944444-18944463 | None:intergenic | 45.0% |
!! | AATAATTTATAAAATATACA+AGG | + | chr5_1:18941657-18941676 | None:intergenic | 5.0% |
!!! | TTTAGTTTAAATAATATTAA+CGG | - | chr5_1:18943579-18943598 | Msa0721890:intron | 5.0% |
CACATGGTGGTTAATGGAGG+GGG | + | chr5_1:18941408-18941427 | None:intergenic | 50.0% | |
ACCGACATTCCCTTCCCATT+AGG | - | chr5_1:18941459-18941478 | Msa0721890:intron | 50.0% | |
GCCTAATGGGAAGGGAATGT+CGG | + | chr5_1:18941463-18941482 | None:intergenic | 50.0% | |
!!! | GGCAGAGGTTGGTTTTCGTT+GGG | - | chr5_1:18941738-18941757 | Msa0721890:intron | 50.0% |
!!! | GCAGAGGTTGGTTTTCGTTG+GGG | - | chr5_1:18941739-18941758 | Msa0721890:intron | 50.0% |
TCGTTGGGGATTCACTGAAC+CGG | - | chr5_1:18941753-18941772 | Msa0721890:intron | 50.0% | |
CCATAGACTCCCACATGTTC+CGG | + | chr5_1:18941775-18941794 | None:intergenic | 50.0% | |
GGACCCACGAGAAAACATCT+AGG | - | chr5_1:18942152-18942171 | Msa0721890:intron | 50.0% | |
! | CCCCCTAGATGTTTTCTCGT+GGG | + | chr5_1:18942158-18942177 | None:intergenic | 50.0% |
CCCACGAGAAAACATCTAGG+GGG | - | chr5_1:18942155-18942174 | Msa0721890:intron | 50.0% | |
! | ACCCCCTAGATGTTTTCTCG+TGG | + | chr5_1:18942159-18942178 | None:intergenic | 50.0% |
CGTGAGAACTGACTGTAAGG+CGG | + | chr5_1:18942369-18942388 | None:intergenic | 50.0% | |
GTGATGGTCAATGGCAAAGG+TGG | + | chr5_1:18942878-18942897 | None:intergenic | 50.0% | |
!! | AGGGCTAGTCAACTCAGTGA+TGG | + | chr5_1:18942894-18942913 | None:intergenic | 50.0% |
CAGGGCCGGAATACAGTTAT+AGG | + | chr5_1:18943432-18943451 | None:intergenic | 50.0% | |
GTTTGACATGGTTTCAGGGG+TGG | - | chr5_1:18944026-18944045 | Msa0721890:intron | 50.0% | |
!! | ACAATCTTGGTGTTGCTCCG+CGG | + | chr5_1:18944273-18944292 | None:intergenic | 50.0% |
! | TGTAGCCATTGGTGCTTACC+AGG | - | chr5_1:18944290-18944309 | Msa0721890:CDS | 50.0% |
GTACTCCTGGTAAGCACCAA+TGG | + | chr5_1:18944298-18944317 | None:intergenic | 50.0% | |
! | TTGGTGCTTACCAGGAGTAC+CGG | - | chr5_1:18944298-18944317 | Msa0721890:CDS | 50.0% |
! | TCGGGTTCTAGCTGCAGTTG+CGG | + | chr5_1:18940907-18940926 | None:intergenic | 55.0% |
GGTTAATGGAGGGGGACAGA+CGG | + | chr5_1:18941400-18941419 | None:intergenic | 55.0% | |
TGGAAAAGTTGCGAGGGCAG+AGG | - | chr5_1:18941723-18941742 | Msa0721890:intron | 55.0% | |
AAAGTTGCGAGGGCAGAGGT+TGG | - | chr5_1:18941727-18941746 | Msa0721890:intron | 55.0% | |
!!! | GGGCAGAGGTTGGTTTTCGT+TGG | - | chr5_1:18941737-18941756 | Msa0721890:intron | 55.0% |
CCGGAACATGTGGGAGTCTA+TGG | - | chr5_1:18941772-18941791 | Msa0721890:intron | 55.0% | |
GAGAACTGACTGTAAGGCGG+AGG | + | chr5_1:18942366-18942385 | None:intergenic | 55.0% | |
CAATGGCAAAGGTGGGAGGT+CGG | + | chr5_1:18942870-18942889 | None:intergenic | 55.0% | |
TGGTCAATGGCAAAGGTGGG+AGG | + | chr5_1:18942874-18942893 | None:intergenic | 55.0% | |
!! | AGCACACTGGGGTGGATTAG+TGG | - | chr5_1:18943123-18943142 | Msa0721890:intron | 55.0% |
ATGGTTTCAGGGGTGGGCAA+TGG | - | chr5_1:18944033-18944052 | Msa0721890:CDS | 55.0% | |
AGGGGTGGGCAATGGAATTC+AGG | - | chr5_1:18944041-18944060 | Msa0721890:CDS | 55.0% | |
GGTGGGCAATGGAATTCAGG+AGG | - | chr5_1:18944044-18944063 | Msa0721890:CDS | 55.0% | |
AGAAGCAGAACGAACCACCG+CGG | - | chr5_1:18944253-18944272 | Msa0721890:CDS | 55.0% | |
!! | TACCAGGAGTACCGGATACC+TGG | - | chr5_1:18944306-18944325 | Msa0721890:CDS | 55.0% |
TTCCAGGTATCCGGTACTCC+TGG | + | chr5_1:18944311-18944330 | None:intergenic | 55.0% | |
!! | ATCTTGGTGTTGCTCCGCGG+TGG | + | chr5_1:18944270-18944289 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_1 | gene | 18939905 | 18944753 | 18939905 | ID=Msa0721890;Name=Msa0721890 |
chr5_1 | mRNA | 18939905 | 18944753 | 18939905 | ID=Msa0721890-mRNA-1;Parent=Msa0721890;Name=Msa0721890-mRNA-1;_AED=0.05;_eAED=0.05;_QI=135|1|1|1|1|1|5|368|491 |
chr5_1 | exon | 18939905 | 18940615 | 18939905 | ID=Msa0721890-mRNA-1:exon:7106;Parent=Msa0721890-mRNA-1 |
chr5_1 | exon | 18941935 | 18942093 | 18941935 | ID=Msa0721890-mRNA-1:exon:7105;Parent=Msa0721890-mRNA-1 |
chr5_1 | exon | 18942482 | 18942672 | 18942482 | ID=Msa0721890-mRNA-1:exon:7104;Parent=Msa0721890-mRNA-1 |
chr5_1 | exon | 18942763 | 18942955 | 18942763 | ID=Msa0721890-mRNA-1:exon:7103;Parent=Msa0721890-mRNA-1 |
chr5_1 | exon | 18944029 | 18944753 | 18944029 | ID=Msa0721890-mRNA-1:exon:7102;Parent=Msa0721890-mRNA-1 |
chr5_1 | five_prime_UTR | 18944619 | 18944753 | 18944619 | ID=Msa0721890-mRNA-1:five_prime_utr;Parent=Msa0721890-mRNA-1 |
chr5_1 | CDS | 18944029 | 18944618 | 18944029 | ID=Msa0721890-mRNA-1:cds;Parent=Msa0721890-mRNA-1 |
chr5_1 | CDS | 18942763 | 18942955 | 18942763 | ID=Msa0721890-mRNA-1:cds;Parent=Msa0721890-mRNA-1 |
chr5_1 | CDS | 18942482 | 18942672 | 18942482 | ID=Msa0721890-mRNA-1:cds;Parent=Msa0721890-mRNA-1 |
chr5_1 | CDS | 18941935 | 18942093 | 18941935 | ID=Msa0721890-mRNA-1:cds;Parent=Msa0721890-mRNA-1 |
chr5_1 | CDS | 18940273 | 18940615 | 18940273 | ID=Msa0721890-mRNA-1:cds;Parent=Msa0721890-mRNA-1 |
chr5_1 | three_prime_UTR | 18939905 | 18940272 | 18939905 | ID=Msa0721890-mRNA-1:three_prime_utr;Parent=Msa0721890-mRNA-1 |
Gene Sequence |
Protein sequence |