Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0844860 | XP_003613600.1 | 98.077 | 312 | 6 | 0 | 1 | 312 | 1 | 312 | 0.0 | 629 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0844860 | G7K9T7 | 98.077 | 312 | 6 | 0 | 1 | 312 | 1 | 312 | 0.0 | 629 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0844860 | Msa0844960 | 0.960488 | 1.294427e-118 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0844860 | MtrunA17_Chr5g0416081 | 98.077 | 312 | 6 | 0 | 1 | 312 | 1 | 312 | 0.0 | 629 |
| Msa0844860 | MtrunA17_Chr3g0120881 | 32.759 | 232 | 151 | 3 | 3 | 233 | 1 | 228 | 5.44e-37 | 134 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0844860 | AT1G27000.1 | 44.551 | 312 | 163 | 5 | 3 | 312 | 1 | 304 | 2.59e-86 | 261 |
| Msa0844860 | AT2G02730.3 | 45.977 | 261 | 131 | 3 | 3 | 263 | 1 | 251 | 2.33e-77 | 238 |
| Msa0844860 | AT2G02730.1 | 45.977 | 261 | 131 | 3 | 3 | 263 | 1 | 251 | 2.33e-77 | 238 |
| Msa0844860 | AT2G02730.2 | 45.977 | 261 | 131 | 3 | 3 | 263 | 1 | 251 | 2.33e-77 | 238 |
| Msa0844860 | AT1G04960.1 | 38.528 | 231 | 132 | 3 | 3 | 230 | 1 | 224 | 1.46e-48 | 165 |
| Msa0844860 | AT1G04960.2 | 38.532 | 218 | 124 | 3 | 16 | 230 | 31 | 241 | 7.13e-45 | 155 |
| Msa0844860 | AT1G24265.2 | 24.887 | 221 | 155 | 5 | 11 | 226 | 5 | 219 | 2.44e-17 | 81.6 |
| Msa0844860 | AT1G24265.1 | 24.887 | 221 | 155 | 5 | 11 | 226 | 5 | 219 | 2.44e-17 | 81.6 |
| Msa0844860 | AT1G24265.3 | 25.701 | 214 | 148 | 5 | 18 | 226 | 47 | 254 | 4.70e-17 | 81.3 |
| Msa0844860 | AT1G24267.1 | 26.383 | 235 | 162 | 4 | 9 | 238 | 3 | 231 | 8.05e-12 | 65.5 |
| Msa0844860 | AT1G24267.2 | 27.119 | 236 | 160 | 5 | 9 | 238 | 3 | 232 | 6.92e-11 | 62.8 |
Find 103 sgRNAs with CRISPR-Local
Find 495 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAGAAAGTAGTCACTATTT+TGG | 0.169488 | 5_4:+23492508 | None:intergenic |
| ATGGGATTGGACTATATTAT+TGG | 0.190078 | 5_4:-23494652 | Msa0844860:CDS |
| GACCCAGAGAATTCAAATTT+TGG | 0.210369 | 5_4:-23496141 | Msa0844860:CDS |
| CATCCAAAATTTGAATTCTC+TGG | 0.218747 | 5_4:+23496138 | None:intergenic |
| TATATTCAAGTTAGTGATTT+GGG | 0.278066 | 5_4:-23492652 | Msa0844860:three_prime_UTR |
| GAATTCAGTGCTTGAGAATC+AGG | 0.292398 | 5_4:-23494852 | Msa0844860:intron |
| TGATTTGATCGGTGATCTTC+AGG | 0.298477 | 5_4:-23500113 | Msa0844860:intron |
| CTATATTCAAGTTAGTGATT+TGG | 0.307343 | 5_4:-23492653 | Msa0844860:three_prime_UTR |
| GTAGACCTCCCTGGAAGTTT+TGG | 0.311620 | 5_4:+23494007 | None:intergenic |
| TTGCGTAGCTATATGCTTGC+AGG | 0.320870 | 5_4:+23500392 | None:intergenic |
| GCTCACATATCCAGGATTTC+AGG | 0.324581 | 5_4:-23493978 | Msa0844860:intron |
| TACTATTGTGCCGGGTGGTT+TGG | 0.326973 | 5_4:-23493723 | Msa0844860:CDS |
| ACCTTGGGTGCCGTGGGTTA+TGG | 0.332638 | 5_4:-23498611 | Msa0844860:CDS |
| TAAGATGGCACAGTCAATTA+AGG | 0.334952 | 5_4:-23496096 | Msa0844860:CDS |
| CTATATTATTGGCTTTATTA+CGG | 0.335288 | 5_4:-23494641 | Msa0844860:CDS |
| GTTGCAGGAAGTTGCAAATA+TGG | 0.336219 | 5_4:-23494671 | Msa0844860:intron |
| GAGAGTGCCGGACTCTTTGC+AGG | 0.347790 | 5_4:-23494608 | Msa0844860:intron |
| CGCCGATGCCATTGCTGCTC+AGG | 0.350306 | 5_4:-23498947 | Msa0844860:intron |
| TTTGCCTTAGATTCGGCGTT+TGG | 0.357235 | 5_4:-23498828 | Msa0844860:intron |
| CTGCCACGATGACCTCGTTT+TGG | 0.358765 | 5_4:+23500440 | None:intergenic |
| GTGGTTCCAGCTGCCACCTT+GGG | 0.360760 | 5_4:-23498626 | Msa0844860:CDS |
| GTCCTCTTCATCGCCGTAAC+TGG | 0.369272 | 5_4:-23500264 | Msa0844860:intron |
| GTTGGAAAAGTCCGGGGATC+AGG | 0.371091 | 5_4:-23498992 | Msa0844860:CDS |
| TGAAGCTGACCTATCTAAAC+TGG | 0.377732 | 5_4:+23493748 | None:intergenic |
| CTGTCAAAAGGAATTTAGTT+TGG | 0.383268 | 5_4:-23492604 | Msa0844860:three_prime_UTR |
| CAAAAGCAATTGGCATAAAC+AGG | 0.388317 | 5_4:+23492573 | None:intergenic |
| AGCTGCCACCTTGGGTGCCG+TGG | 0.393347 | 5_4:-23498618 | Msa0844860:CDS |
| GACAAACCATAGTAATGAAT+GGG | 0.396947 | 5_4:-23498775 | Msa0844860:CDS |
| ATGGCTTATCATAGTGGAAT+CGG | 0.413245 | 5_4:-23500297 | Msa0844860:CDS |
| AAGGAACAACCAAAACTTCC+AGG | 0.426194 | 5_4:-23494016 | Msa0844860:CDS |
| TAGAAGAACACCTGAAATCC+TGG | 0.436728 | 5_4:+23493968 | None:intergenic |
| AGCTTCAGATACTATTGTGC+CGG | 0.449268 | 5_4:-23493732 | Msa0844860:CDS |
| GTGAAAGGGTTGGAAAAGTC+CGG | 0.450195 | 5_4:-23499000 | Msa0844860:CDS |
| CTACTTCGACCAAGTGTTGA+TGG | 0.450224 | 5_4:-23492846 | Msa0844860:exon |
| CAAAGAGTCCGGCACTCTCC+GGG | 0.451043 | 5_4:+23494612 | None:intergenic |
| ATCCAAAATTTGAATTCTCT+GGG | 0.454696 | 5_4:+23496139 | None:intergenic |
| AAGAAAATTGAGCTGTCAAA+AGG | 0.454760 | 5_4:-23492616 | Msa0844860:three_prime_UTR |
| TTGCAGGAAGTTGCAAATAT+GGG | 0.456775 | 5_4:-23494670 | Msa0844860:intron |
| TGTGGTTCCAGCTGCCACCT+TGG | 0.458676 | 5_4:-23498627 | Msa0844860:CDS |
| ATGCCACATTCAAAAGCAAT+TGG | 0.463829 | 5_4:+23492563 | None:intergenic |
| ACGGCACCCAAGGTGGCAGC+TGG | 0.465085 | 5_4:+23498620 | None:intergenic |
| AGTCATTGTCCAGTTTAGAT+AGG | 0.471397 | 5_4:-23493757 | Msa0844860:CDS |
| AGACAAACCATAGTAATGAA+TGG | 0.473819 | 5_4:-23498776 | Msa0844860:CDS |
| TCTCTCTAACGCCATGGCTA+TGG | 0.474338 | 5_4:-23500316 | Msa0844860:exon |
| AGGTAATTTGTCATCTCTTG+TGG | 0.475135 | 5_4:-23498645 | Msa0844860:CDS |
| ACTAGTATGCTCACATATCC+AGG | 0.485153 | 5_4:-23493986 | Msa0844860:CDS |
| TAGCTATATGCTTGCAGGGA+AGG | 0.502410 | 5_4:+23500397 | None:intergenic |
| TGCTCATAGGCACTAGTGAA+AGG | 0.502471 | 5_4:-23499015 | Msa0844860:intron |
| CACAACAGAAAGTCATTAGC+AGG | 0.508141 | 5_4:+23492731 | None:intergenic |
| GCTTTATTACGGCAAATGCC+CGG | 0.508354 | 5_4:-23494630 | Msa0844860:CDS |
| AGGTATATTATGATTTATGC+AGG | 0.509670 | 5_4:+23492751 | None:intergenic |
| GCTCATAGGCACTAGTGAAA+GGG | 0.511781 | 5_4:-23499014 | Msa0844860:intron |
| GGAAGTTGCAAATATGGGAT+TGG | 0.520895 | 5_4:-23494665 | Msa0844860:CDS |
| GGCAAATGCCCGGAGAGTGC+CGG | 0.523005 | 5_4:-23494620 | Msa0844860:CDS |
| TGAAAGGGTTGGAAAAGTCC+GGG | 0.525822 | 5_4:-23498999 | Msa0844860:CDS |
| TTCACCTTCAGCCTGATCCC+CGG | 0.530274 | 5_4:+23498981 | None:intergenic |
| AGCAGCGAAGGCCGTTGTTG+AGG | 0.531539 | 5_4:-23493688 | Msa0844860:intron |
| GCTGCCACCTTGGGTGCCGT+GGG | 0.532377 | 5_4:-23498617 | Msa0844860:CDS |
| GAAGAAGGAAGTACCAGTTA+CGG | 0.533263 | 5_4:+23500251 | None:intergenic |
| ATACCCACCTGCAAAGAGTC+CGG | 0.533950 | 5_4:+23494601 | None:intergenic |
| TGGCTTATCATAGTGGAATC+GGG | 0.534196 | 5_4:-23500296 | Msa0844860:CDS |
| GTTTGTTACCTGAGCAGCAA+TGG | 0.542711 | 5_4:+23498939 | None:intergenic |
| CTGAGCAGCAATGGCATCGG+CGG | 0.543224 | 5_4:+23498948 | None:intergenic |
| AATGCGCAAACAATATAAGA+TGG | 0.548314 | 5_4:-23496111 | Msa0844860:CDS |
| TATATGCTTGCAGGGAAGGA+AGG | 0.548869 | 5_4:+23500401 | None:intergenic |
| TTATGGTTACATGTGGTTGA+AGG | 0.557263 | 5_4:-23498594 | Msa0844860:intron |
| ATGGCTATGGCTTATCATAG+TGG | 0.557647 | 5_4:-23500303 | Msa0844860:CDS |
| GCTTCAGATACTATTGTGCC+GGG | 0.558234 | 5_4:-23493731 | Msa0844860:CDS |
| GGCAAATTATCTGATTTGAT+CGG | 0.562791 | 5_4:-23500124 | Msa0844860:CDS |
| ACCATAACCCACGGCACCCA+AGG | 0.564207 | 5_4:+23498610 | None:intergenic |
| GGGGATCAGGCTGAAGGTGA+AGG | 0.565982 | 5_4:-23498979 | Msa0844860:CDS |
| TACCAGTTACGGCGATGAAG+AGG | 0.572999 | 5_4:+23500262 | None:intergenic |
| GAGACCTTGCCATCAACACT+TGG | 0.578373 | 5_4:+23492837 | None:intergenic |
| TGCGTAGCTATATGCTTGCA+GGG | 0.578590 | 5_4:+23500393 | None:intergenic |
| ATAGGCACTAGTGAAAGGGT+TGG | 0.586495 | 5_4:-23499010 | Msa0844860:intron |
| AAGTCCGGGGATCAGGCTGA+AGG | 0.588920 | 5_4:-23498985 | Msa0844860:CDS |
| GCAACACACAGTGGCAATGT+TGG | 0.591450 | 5_4:-23495405 | Msa0844860:intron |
| AGCATACTAGTAGACCTCCC+TGG | 0.594208 | 5_4:+23493998 | None:intergenic |
| GATTTCAGCGACCTGTGTGA+AGG | 0.594289 | 5_4:+23500367 | None:intergenic |
| TACCTGAGCAGCAATGGCAT+CGG | 0.596170 | 5_4:+23498945 | None:intergenic |
| ATATACCCTCTCAGGATGGA+AGG | 0.598299 | 5_4:-23494877 | Msa0844860:intron |
| TCGACCAAGTGTTGATGGCA+AGG | 0.603236 | 5_4:-23492841 | Msa0844860:exon |
| TACGGCGATGAAGAGGACCT+TGG | 0.605358 | 5_4:+23500269 | None:intergenic |
| AGGAACAACCAAAACTTCCA+GGG | 0.613013 | 5_4:-23494015 | Msa0844860:CDS |
| ATAATCTAGAGAAGCAGCGA+AGG | 0.617542 | 5_4:-23493700 | Msa0844860:CDS |
| GTACGTGACTAAACGCAACA+TGG | 0.628631 | 5_4:-23498325 | Msa0844860:CDS |
| TAGTGGAATCGGGATCTCCA+AGG | 0.639289 | 5_4:-23500286 | Msa0844860:CDS |
| CCGTGGGTTATGGTTACATG+TGG | 0.642503 | 5_4:-23498601 | Msa0844860:CDS |
| ACAAACCATAGTAATGAATG+GGG | 0.647379 | 5_4:-23498774 | Msa0844860:CDS |
| ATAACCCACGGCACCCAAGG+TGG | 0.654419 | 5_4:+23498613 | None:intergenic |
| TCAGATACTATTGTGCCGGG+TGG | 0.669543 | 5_4:-23493728 | Msa0844860:CDS |
| CCACATGTAACCATAACCCA+CGG | 0.673802 | 5_4:+23498601 | None:intergenic |
| GCTAAATCAAACCTCAACAA+CGG | 0.699768 | 5_4:+23493677 | None:intergenic |
| TCTAGATTATCCAAACCACC+CGG | 0.701858 | 5_4:+23493713 | None:intergenic |
| GAAAGGGTTGGAAAAGTCCG+GGG | 0.701993 | 5_4:-23498998 | Msa0844860:CDS |
| ACTATGATAAGCCATAGCCA+TGG | 0.702387 | 5_4:+23500305 | None:intergenic |
| ACTTACAGCAATGACATCCG+AGG | 0.707335 | 5_4:+23498263 | None:intergenic |
| GCTACGCAAAGCCTTCACAC+AGG | 0.708761 | 5_4:-23500378 | Msa0844860:intron |
| GAGCGTCGTGCAACACACAG+TGG | 0.711634 | 5_4:-23495414 | Msa0844860:CDS |
| TAGCCAAAACGAGGTCATCG+TGG | 0.717811 | 5_4:-23500443 | Msa0844860:five_prime_UTR |
| AAAGAAGTTTAGCCAAAACG+AGG | 0.727110 | 5_4:-23500452 | None:intergenic |
| CAAACCATAGTAATGAATGG+GGG | 0.730627 | 5_4:-23498773 | Msa0844860:CDS |
| AACAACCAAAACTTCCAGGG+AGG | 0.731667 | 5_4:-23494012 | Msa0844860:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCAGATTTTTTTTTTTTTTT+TGG | - | chr5_4:23493017-23493036 | Msa0844860:intron | 10.0% |
| !!! | CAGATTTTTTTTTTTTTTTT+GGG | - | chr5_4:23493018-23493037 | Msa0844860:intron | 10.0% |
| !!! | AGATTTTTTTTTTTTTTTTG+GGG | - | chr5_4:23493019-23493038 | Msa0844860:intron | 10.0% |
| !!! | ATTATTTTAGAAATATCAAA+TGG | + | chr5_4:23494503-23494522 | None:intergenic | 10.0% |
| !!! | TATTTGTTTATTTTTATTAG+TGG | - | chr5_4:23498335-23498354 | Msa0844860:CDS | 10.0% |
| !!! | AACTTTTTTTGAAATAAAAA+AGG | + | chr5_4:23498516-23498535 | None:intergenic | 10.0% |
| !!! | TCTATATAAAAATTTTATAC+TGG | + | chr5_4:23499705-23499724 | None:intergenic | 10.0% |
| !!! | TTATATATTTTTTTGCTCAT+AGG | - | chr5_4:23493888-23493907 | Msa0844860:intron | 15.0% |
| !!! | ACTATTATAGTTTGTATTAT+AGG | - | chr5_4:23494925-23494944 | Msa0844860:intron | 15.0% |
| !!! | TTATAGTTTTATTTTTCTCT+TGG | + | chr5_4:23495151-23495170 | None:intergenic | 15.0% |
| !!! | TAAACCTTAGTTAATTTTTT+TGG | + | chr5_4:23495203-23495222 | None:intergenic | 15.0% |
| !! | AACTTTAATAAAAAATGAGT+AGG | - | chr5_4:23495600-23495619 | Msa0844860:intron | 15.0% |
| !! | TAATGTAATTGATATAGTAA+TGG | - | chr5_4:23495643-23495662 | Msa0844860:intron | 15.0% |
| !! | AATGTAATTGATATAGTAAT+GGG | - | chr5_4:23495644-23495663 | Msa0844860:intron | 15.0% |
| !!! | TTTTAAAATCATTCTGTAAT+TGG | + | chr5_4:23495908-23495927 | None:intergenic | 15.0% |
| !! | CCTTAAATTTATTCTTAAAA+CGG | - | chr5_4:23496456-23496475 | Msa0844860:intron | 15.0% |
| !! | CTTAAATTTATTCTTAAAAC+GGG | - | chr5_4:23496457-23496476 | Msa0844860:intron | 15.0% |
| !! | TTTATTAATATTGGAATGTT+GGG | - | chr5_4:23497226-23497245 | Msa0844860:intron | 15.0% |
| !!! | TTTACAAAATTTTGAAAACA+TGG | + | chr5_4:23498647-23498666 | None:intergenic | 15.0% |
| !! | TGATAATAATTAGTGTTATG+TGG | - | chr5_4:23492977-23492996 | Msa0844860:intron | 20.0% |
| !!! | TTTTTTTTTTTTTTTTGGGG+CGG | - | chr5_4:23493022-23493041 | Msa0844860:intron | 20.0% |
| !! | TTCATCTAATTATTGATACT+TGG | - | chr5_4:23493130-23493149 | Msa0844860:intron | 20.0% |
| !! | TCATCTAATTATTGATACTT+GGG | - | chr5_4:23493131-23493150 | Msa0844860:intron | 20.0% |
| !!! | AAAAACAAGTTATTTTTCTC+TGG | + | chr5_4:23493204-23493223 | None:intergenic | 20.0% |
| !!! | AGAAAAATAACTTGTTTTTG+CGG | - | chr5_4:23493205-23493224 | Msa0844860:intron | 20.0% |
| !! | ACATTTAAAAAATCAATGAG+AGG | + | chr5_4:23494236-23494255 | None:intergenic | 20.0% |
| !! | AAATCACTCATAAACATAAA+CGG | + | chr5_4:23494478-23494497 | None:intergenic | 20.0% |
| !! | ATAGTAACTTTATCAATAGA+AGG | + | chr5_4:23494910-23494929 | None:intergenic | 20.0% |
| !! | TCAACCAAAAAAATTAACTA+AGG | - | chr5_4:23495196-23495215 | Msa0844860:intron | 20.0% |
| !! | AGGTTTATGAGAATAAAAAT+AGG | - | chr5_4:23495216-23495235 | Msa0844860:intron | 20.0% |
| !!! | TACCAATTTTAGTTGTTTTT+AGG | + | chr5_4:23495258-23495277 | None:intergenic | 20.0% |
| !!! | ATGATTTTAAAAAACCATCA+AGG | - | chr5_4:23495916-23495935 | Msa0844860:intron | 20.0% |
| !!! | TTTACTGTTCAAAAGTATAT+AGG | - | chr5_4:23495983-23496002 | Msa0844860:intron | 20.0% |
| !!! | CCGTTTTAAGAATAAATTTA+AGG | + | chr5_4:23496459-23496478 | None:intergenic | 20.0% |
| !! | TCAATTCAAAGATTTAACAT+GGG | - | chr5_4:23496657-23496676 | Msa0844860:intron | 20.0% |
| !! | AGAAGCAATTAAAATTTAGA+AGG | + | chr5_4:23496720-23496739 | None:intergenic | 20.0% |
| !! | TCAAAATCAATAACTTCTAA+AGG | + | chr5_4:23497057-23497076 | None:intergenic | 20.0% |
| !! | TGTTGCATCTTTATTAATAT+TGG | - | chr5_4:23497217-23497236 | Msa0844860:intron | 20.0% |
| !! | CTTTATTAATATTGGAATGT+TGG | - | chr5_4:23497225-23497244 | Msa0844860:intron | 20.0% |
| !! | TAACTAACTCGTAAAATTAT+AGG | + | chr5_4:23497274-23497293 | None:intergenic | 20.0% |
| !!! | TATAATTTTACGAGTTAGTT+AGG | - | chr5_4:23497273-23497292 | Msa0844860:intron | 20.0% |
| !!! | CAAATGATAGTTTTGTTTTT+TGG | + | chr5_4:23497691-23497710 | None:intergenic | 20.0% |
| !! | TAAATCTGAATTATGATCTA+TGG | - | chr5_4:23497826-23497845 | Msa0844860:intron | 20.0% |
| !! | AAGAATGATTCAAATAAAAG+TGG | + | chr5_4:23498012-23498031 | None:intergenic | 20.0% |
| !! | AACTACTTTGCAAATTTAAA+GGG | + | chr5_4:23498106-23498125 | None:intergenic | 20.0% |
| !! | AAACTACTTTGCAAATTTAA+AGG | + | chr5_4:23498107-23498126 | None:intergenic | 20.0% |
| !! | GTTAAATCAGTATTATTGTT+GGG | + | chr5_4:23498219-23498238 | None:intergenic | 20.0% |
| !! | AGTTAAATCAGTATTATTGT+TGG | + | chr5_4:23498220-23498239 | None:intergenic | 20.0% |
| !!! | CTATATTATTGGCTTTATTA+CGG | - | chr5_4:23498275-23498294 | Msa0844860:CDS | 20.0% |
| !!! | ATGTTATATCTTGTATTTTC+AGG | - | chr5_4:23498866-23498885 | Msa0844860:intron | 20.0% |
| !!! | TGTTATATCTTGTATTTTCA+GGG | - | chr5_4:23498867-23498886 | Msa0844860:intron | 20.0% |
| !! | AAAATAGATAACAAAGTACA+AGG | + | chr5_4:23498974-23498993 | None:intergenic | 20.0% |
| !! | GTACATATTATTAAATTGTG+AGG | + | chr5_4:23499407-23499426 | None:intergenic | 20.0% |
| !! | TTTATATAGAAATCTAGTTG+TGG | - | chr5_4:23499715-23499734 | Msa0844860:intron | 20.0% |
| !! | CATATTGAATATACAAATCA+AGG | - | chr5_4:23499774-23499793 | Msa0844860:intron | 20.0% |
| !!! | TAACTATTTTTGTGATAAAC+TGG | + | chr5_4:23499901-23499920 | None:intergenic | 20.0% |
| !!! | TATATTCAAGTTAGTGATTT+GGG | - | chr5_4:23500264-23500283 | Msa0844860:intron | 20.0% |
| ! | AAGAAAAGTAGAGTGAAATT+TGG | + | chr5_4:23492845-23492864 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTTTTTTTGGGGC+GGG | - | chr5_4:23493023-23493042 | Msa0844860:intron | 25.0% |
| ! | TATAAGTTGTTTATCGAAAC+AGG | + | chr5_4:23493305-23493324 | None:intergenic | 25.0% |
| !!! | GTTGTTTTTATACGCTATAT+TGG | - | chr5_4:23493653-23493672 | Msa0844860:intron | 25.0% |
| !!! | TTGCAACATTCCAATTTTTT+GGG | + | chr5_4:23493804-23493823 | None:intergenic | 25.0% |
| ! | GTAATAGTTTCATTACTTTG+TGG | - | chr5_4:23494375-23494394 | Msa0844860:intron | 25.0% |
| ! | AAGTATTTCTTGCTTCATAA+AGG | - | chr5_4:23494421-23494440 | Msa0844860:intron | 25.0% |
| ! | AGTATTTCTTGCTTCATAAA+GGG | - | chr5_4:23494422-23494441 | Msa0844860:intron | 25.0% |
| ! | AGAATATTCAATGCAGTAAA+TGG | + | chr5_4:23494681-23494700 | None:intergenic | 25.0% |
| ! | AATAGAAGGAAAAAAACTCT+AGG | + | chr5_4:23494896-23494915 | None:intergenic | 25.0% |
| ! | TATTATAGGAAGACTTGAAT+TGG | - | chr5_4:23494939-23494958 | Msa0844860:intron | 25.0% |
| ! | ATTATAGGAAGACTTGAATT+GGG | - | chr5_4:23494940-23494959 | Msa0844860:intron | 25.0% |
| ! | GTAAATATACCATGTAATGT+GGG | + | chr5_4:23495330-23495349 | None:intergenic | 25.0% |
| ! | TTCTTATTGGTCAAAAACAA+TGG | + | chr5_4:23496282-23496301 | None:intergenic | 25.0% |
| !!! | TTGTTTTTCTCACTTCTTAT+TGG | + | chr5_4:23496295-23496314 | None:intergenic | 25.0% |
| ! | AATAAGAAGTGAGAAAAACA+AGG | - | chr5_4:23496294-23496313 | Msa0844860:intron | 25.0% |
| !!! | ATTTGTTGTCCTTAATATGA+GGG | - | chr5_4:23496560-23496579 | Msa0844860:intron | 25.0% |
| ! | CTCAATTCAAAGATTTAACA+TGG | - | chr5_4:23496656-23496675 | Msa0844860:intron | 25.0% |
| ! | ATCCAAAATTTGAATTCTCT+GGG | + | chr5_4:23496780-23496799 | None:intergenic | 25.0% |
| ! | GTCTTGATGAATATCTATAT+TGG | - | chr5_4:23497085-23497104 | Msa0844860:intron | 25.0% |
| ! | TAAGTAAGATAAACTCTCTT+TGG | - | chr5_4:23497124-23497143 | Msa0844860:intron | 25.0% |
| ! | ATGTTTGAATTCATGATGTT+TGG | - | chr5_4:23497535-23497554 | Msa0844860:intron | 25.0% |
| !! | TAGTTTAGAGTTATGAAGAA+GGG | - | chr5_4:23497586-23497605 | Msa0844860:intron | 25.0% |
| !!! | TTTTGTTTTTTGGTGTAAAC+CGG | + | chr5_4:23497681-23497700 | None:intergenic | 25.0% |
| !!! | ATAATACTGATTTAACTGTG+TGG | - | chr5_4:23498223-23498242 | Msa0844860:intron | 25.0% |
| ! | GGTACAAAGTAAAAACAAAA+TGG | + | chr5_4:23498626-23498645 | None:intergenic | 25.0% |
| ! | TTTGAAAACAATACTGTTTC+AGG | - | chr5_4:23498680-23498699 | Msa0844860:intron | 25.0% |
| ! | TTAATAATTAAGCCACTAGA+TGG | + | chr5_4:23498847-23498866 | None:intergenic | 25.0% |
| !! | TAGTCTGTCATTTGATAATA+CGG | - | chr5_4:23499016-23499035 | Msa0844860:intron | 25.0% |
| !!! | ACTAAACAACTTTTAGAAGT+GGG | + | chr5_4:23499436-23499455 | None:intergenic | 25.0% |
| !!! | AACTAAACAACTTTTAGAAG+TGG | + | chr5_4:23499437-23499456 | None:intergenic | 25.0% |
| ! | TGAAAACATAATGAAGCTTA+AGG | - | chr5_4:23499474-23499493 | Msa0844860:intron | 25.0% |
| ! | TGTAAATAAAACTACCTAAC+TGG | + | chr5_4:23499535-23499554 | None:intergenic | 25.0% |
| !!! | AGGTAGTTTTATTTACACAT+AGG | - | chr5_4:23499538-23499557 | Msa0844860:intron | 25.0% |
| ! | CAACTTCAAACAAACATTTA+GGG | - | chr5_4:23499574-23499593 | Msa0844860:intron | 25.0% |
| !!! | TATTTTTGTGATAAACTGGA+CGG | + | chr5_4:23499897-23499916 | None:intergenic | 25.0% |
| !! | AGCAATAGATATTCTCTTTT+TGG | + | chr5_4:23499981-23500000 | None:intergenic | 25.0% |
| ! | TTCCTTATACAAAGCAATAA+AGG | - | chr5_4:23500003-23500022 | Msa0844860:intron | 25.0% |
| ! | TACCTTTATTGCTTTGTATA+AGG | + | chr5_4:23500008-23500027 | None:intergenic | 25.0% |
| ! | AGGTATATTATGATTTATGC+AGG | + | chr5_4:23500168-23500187 | None:intergenic | 25.0% |
| !! | CTATATTCAAGTTAGTGATT+TGG | - | chr5_4:23500263-23500282 | Msa0844860:intron | 25.0% |
| !!! | ATAATTTGCCGTTTTTGAAG+AGG | + | chr5_4:23492782-23492801 | None:intergenic | 30.0% |
| ! | GGCAAATTATCTGATTTGAT+CGG | - | chr5_4:23492792-23492811 | Msa0844860:three_prime_UTR | 30.0% |
| ! | GCTTCATTTGTTAAATTCCA+CGG | - | chr5_4:23492866-23492885 | Msa0844860:intron | 30.0% |
| TATAAAAAACAATGAAGCCG+TGG | + | chr5_4:23492886-23492905 | None:intergenic | 30.0% | |
| ! | TTATGTGGTAGTGATCATTA+GGG | - | chr5_4:23492992-23493011 | Msa0844860:intron | 30.0% |
| !!! | TTTTTTTTTTTTTTGGGGCG+GGG | - | chr5_4:23493024-23493043 | Msa0844860:intron | 30.0% |
| GAAAATCACTCCAAATTTGT+GGG | + | chr5_4:23493176-23493195 | None:intergenic | 30.0% | |
| AGAAAATCACTCCAAATTTG+TGG | + | chr5_4:23493177-23493196 | None:intergenic | 30.0% | |
| TCTCCCAACTAGATAAATAT+AGG | - | chr5_4:23493506-23493525 | Msa0844860:intron | 30.0% | |
| AATAAGTTGTTTGTCCAAAC+CGG | + | chr5_4:23493532-23493551 | None:intergenic | 30.0% | |
| ! | TTTGAAGCTTATAACACAAG+TGG | - | chr5_4:23493550-23493569 | Msa0844860:intron | 30.0% |
| !! | ATAAGTTTTGTGAGACTGTT+TGG | + | chr5_4:23493744-23493763 | None:intergenic | 30.0% |
| !! | TGTTTGTATTGGCTTATTTG+AGG | + | chr5_4:23493779-23493798 | None:intergenic | 30.0% |
| TCAAATAAGCCAATACAAAC+AGG | - | chr5_4:23493778-23493797 | Msa0844860:CDS | 30.0% | |
| !!! | GTTGCAACATTCCAATTTTT+TGG | + | chr5_4:23493805-23493824 | None:intergenic | 30.0% |
| !! | ACTTTTAGTCTTTTGATGCT+AGG | - | chr5_4:23493823-23493842 | Msa0844860:intron | 30.0% |
| ! | TTTGATGCTAGGATTTGTTT+CGG | - | chr5_4:23493834-23493853 | Msa0844860:intron | 30.0% |
| AGACAAACCATAGTAATGAA+TGG | - | chr5_4:23494140-23494159 | Msa0844860:intron | 30.0% | |
| GACAAACCATAGTAATGAAT+GGG | - | chr5_4:23494141-23494160 | Msa0844860:intron | 30.0% | |
| ACAAACCATAGTAATGAATG+GGG | - | chr5_4:23494142-23494161 | Msa0844860:intron | 30.0% | |
| ! | TTCTATTTTGTCATCTAGTG+TGG | - | chr5_4:23494185-23494204 | Msa0844860:intron | 30.0% |
| ! | AATGTTTTTCCCTTTTCTGT+AGG | - | chr5_4:23494251-23494270 | Msa0844860:intron | 30.0% |
| GACAAATTACCTACAGAAAA+GGG | + | chr5_4:23494263-23494282 | None:intergenic | 30.0% | |
| TGACAAATTACCTACAGAAA+AGG | + | chr5_4:23494264-23494283 | None:intergenic | 30.0% | |
| ATATCAAACGTTATGTCAAG+AGG | + | chr5_4:23494807-23494826 | None:intergenic | 30.0% | |
| ATCATCTGTCTTGTGAAAAA+AGG | + | chr5_4:23494870-23494889 | None:intergenic | 30.0% | |
| TTGAAGCATACTATACTGTA+GGG | - | chr5_4:23494963-23494982 | Msa0844860:intron | 30.0% | |
| AAATAGGTCATAAACCTCAT+TGG | - | chr5_4:23495232-23495251 | Msa0844860:intron | 30.0% | |
| GGCCTAAAAACAACTAAAAT+TGG | - | chr5_4:23495253-23495272 | Msa0844860:intron | 30.0% | |
| CGTAAATATACCATGTAATG+TGG | + | chr5_4:23495331-23495350 | None:intergenic | 30.0% | |
| CAGAAACTTTGTGATTGATA+AGG | + | chr5_4:23495392-23495411 | None:intergenic | 30.0% | |
| AATCACAAAGTTTCTGATGT+GGG | - | chr5_4:23495396-23495415 | Msa0844860:intron | 30.0% | |
| ACACATTTGAAAAAGTTGAC+AGG | + | chr5_4:23495512-23495531 | None:intergenic | 30.0% | |
| TCAAATGTGTCAATTACCAT+CGG | - | chr5_4:23495522-23495541 | Msa0844860:intron | 30.0% | |
| AAATTAAATCCAAAAGCCGA+TGG | + | chr5_4:23495541-23495560 | None:intergenic | 30.0% | |
| GGTGTATATATTTATCGAGT+TGG | - | chr5_4:23495665-23495684 | Msa0844860:intron | 30.0% | |
| ! | TATGTATAGCTCGATTTGTT+TGG | + | chr5_4:23495699-23495718 | None:intergenic | 30.0% |
| ! | AAATAGTTTGAGACTTGGTT+CGG | + | chr5_4:23495812-23495831 | None:intergenic | 30.0% |
| AATATAATGCGCTTCTATAC+TGG | - | chr5_4:23495881-23495900 | Msa0844860:intron | 30.0% | |
| TATATGTCTTGGAATAGTTG+AGG | + | chr5_4:23496075-23496094 | None:intergenic | 30.0% | |
| AACTATTCCAAGACATATAG+AGG | - | chr5_4:23496076-23496095 | Msa0844860:intron | 30.0% | |
| TTTCCAGTGTTAAAAGAGAT+AGG | + | chr5_4:23496102-23496121 | None:intergenic | 30.0% | |
| ATAGAAATCTTACATACCCT+AGG | - | chr5_4:23496134-23496153 | Msa0844860:CDS | 30.0% | |
| TAGAAATCTTACATACCCTA+GGG | - | chr5_4:23496135-23496154 | Msa0844860:CDS | 30.0% | |
| TTAATTATCCAAAGTCCCTA+GGG | + | chr5_4:23496153-23496172 | None:intergenic | 30.0% | |
| AAAACAATGGAGAGAGAAAA+AGG | + | chr5_4:23496269-23496288 | None:intergenic | 30.0% | |
| TCAACAAAGTTGTCATCAAA+TGG | - | chr5_4:23496320-23496339 | Msa0844860:intron | 30.0% | |
| ! | TTGCTGTCACAATATTTTTC+CGG | - | chr5_4:23496380-23496399 | Msa0844860:intron | 30.0% |
| TGTTAAAAACTGTTGCAGTT+TGG | + | chr5_4:23496427-23496446 | None:intergenic | 30.0% | |
| CTCATATTAAGGACAACAAA+TGG | + | chr5_4:23496561-23496580 | None:intergenic | 30.0% | |
| !! | CATTTGTTGTCCTTAATATG+AGG | - | chr5_4:23496559-23496578 | Msa0844860:intron | 30.0% |
| AATATCTCCAGAAAAACAGT+GGG | + | chr5_4:23496619-23496638 | None:intergenic | 30.0% | |
| AAATATCTCCAGAAAAACAG+TGG | + | chr5_4:23496620-23496639 | None:intergenic | 30.0% | |
| TGAATTGAGTGCATAATGAT+GGG | + | chr5_4:23496645-23496664 | None:intergenic | 30.0% | |
| TTGAATTGAGTGCATAATGA+TGG | + | chr5_4:23496646-23496665 | None:intergenic | 30.0% | |
| ! | TTGCTTCTCAATGTTTTTCA+TGG | - | chr5_4:23496732-23496751 | Msa0844860:intron | 30.0% |
| CATCCAAAATTTGAATTCTC+TGG | + | chr5_4:23496781-23496800 | None:intergenic | 30.0% | |
| AATGCGCAAACAATATAAGA+TGG | - | chr5_4:23496805-23496824 | Msa0844860:intron | 30.0% | |
| GGTCACATGTATCTTTATAT+AGG | + | chr5_4:23496893-23496912 | None:intergenic | 30.0% | |
| TGTGTATCCAAAAATCTGTT+TGG | + | chr5_4:23496914-23496933 | None:intergenic | 30.0% | |
| TCTATGTAGACTTACCTATA+AGG | - | chr5_4:23496989-23497008 | Msa0844860:intron | 30.0% | |
| !! | GCTATTTCTTTGCAGATAAA+TGG | - | chr5_4:23497022-23497041 | Msa0844860:intron | 30.0% |
| ! | TCTTTGCAGATAAATGGATT+AGG | - | chr5_4:23497028-23497047 | Msa0844860:intron | 30.0% |
| CAATTTCAATTCCATTATCC+AGG | + | chr5_4:23497344-23497363 | None:intergenic | 30.0% | |
| ACATTGTAATACTCTTGTAC+AGG | - | chr5_4:23497436-23497455 | Msa0844860:intron | 30.0% | |
| TGGCTTATTAATTGTTAACG+TGG | - | chr5_4:23497555-23497574 | Msa0844860:intron | 30.0% | |
| ! | CTAGTTTAGAGTTATGAAGA+AGG | - | chr5_4:23497585-23497604 | Msa0844860:intron | 30.0% |
| !!! | AGTTATGAAGAAGGGTATTT+TGG | - | chr5_4:23497594-23497613 | Msa0844860:intron | 30.0% |
| AGTCTATAGTCCTAATAAGT+AGG | - | chr5_4:23497954-23497973 | Msa0844860:intron | 30.0% | |
| TACTATGCAACCTACTTATT+AGG | + | chr5_4:23497967-23497986 | None:intergenic | 30.0% | |
| ! | ATCAATCCGTTTCTTTTGTT+TGG | - | chr5_4:23498138-23498157 | Msa0844860:intron | 30.0% |
| GATCTTCCAAACAAAAGAAA+CGG | + | chr5_4:23498147-23498166 | None:intergenic | 30.0% | |
| TACATAATCTATTCAATGCC+TGG | - | chr5_4:23498169-23498188 | Msa0844860:intron | 30.0% | |
| ACATAATCTATTCAATGCCT+GGG | - | chr5_4:23498170-23498189 | Msa0844860:intron | 30.0% | |
| ATGGGATTGGACTATATTAT+TGG | - | chr5_4:23498264-23498283 | Msa0844860:intron | 30.0% | |
| CCATACATAACTGAAACATT+CGG | + | chr5_4:23498410-23498429 | None:intergenic | 30.0% | |
| TGTTTCAGTTATGTATGGTT+TGG | - | chr5_4:23498412-23498431 | Msa0844860:intron | 30.0% | |
| GTGTAAACATAAATCGATAG+TGG | - | chr5_4:23498755-23498774 | Msa0844860:intron | 30.0% | |
| !! | AAATGTCAGTTCTAGATACA+AGG | + | chr5_4:23498794-23498813 | None:intergenic | 30.0% |
| ! | AGTCTGTCATTTGATAATAC+GGG | - | chr5_4:23499017-23499036 | Msa0844860:intron | 30.0% |
| TAACATGCTTACATTCTAAG+TGG | - | chr5_4:23499307-23499326 | Msa0844860:intron | 30.0% | |
| ! | CATTATTGTTTTCACCAGTT+AGG | - | chr5_4:23499518-23499537 | Msa0844860:intron | 30.0% |
| ! | CCTAAATGTTTGTTTGAAGT+TGG | + | chr5_4:23499576-23499595 | None:intergenic | 30.0% |
| CCAACTTCAAACAAACATTT+AGG | - | chr5_4:23499573-23499592 | Msa0844860:intron | 30.0% | |
| !! | ACAAACATTTAGGGTCATTT+TGG | - | chr5_4:23499583-23499602 | Msa0844860:intron | 30.0% |
| CTTTCGTATTATTCAACTGA+TGG | - | chr5_4:23499656-23499675 | Msa0844860:intron | 30.0% | |
| ! | TGTGGACTGTTAAAACAAAT+TGG | - | chr5_4:23499733-23499752 | Msa0844860:intron | 30.0% |
| ! | GTGGACTGTTAAAACAAATT+GGG | - | chr5_4:23499734-23499753 | Msa0844860:intron | 30.0% |
| TGGACTGTTAAAACAAATTG+GGG | - | chr5_4:23499735-23499754 | Msa0844860:intron | 30.0% | |
| GCATCATTTATTTATGGCAA+AGG | + | chr5_4:23499835-23499854 | None:intergenic | 30.0% | |
| ATAAATAAATGATGCTGCAG+CGG | - | chr5_4:23499840-23499859 | Msa0844860:intron | 30.0% | |
| ! | ATGATGACTATGTAGCTTTT+AGG | - | chr5_4:23500104-23500123 | Msa0844860:intron | 30.0% |
| AAGAAAATTGAGCTGTCAAA+AGG | - | chr5_4:23500300-23500319 | Msa0844860:CDS | 30.0% | |
| CTGTCAAAAGGAATTTAGTT+TGG | - | chr5_4:23500312-23500331 | Msa0844860:exon | 30.0% | |
| ! | CTAGAAAGTAGTCACTATTT+TGG | + | chr5_4:23500411-23500430 | None:intergenic | 30.0% |
| ! | ATGGCTTATCATAGTGGAAT+CGG | - | chr5_4:23492619-23492638 | Msa0844860:three_prime_UTR | 35.0% |
| ! | GTTATGTGGTAGTGATCATT+AGG | - | chr5_4:23492991-23493010 | Msa0844860:intron | 35.0% |
| !!! | TTTTTTTTTTTTTGGGGCGG+GGG | - | chr5_4:23493025-23493044 | Msa0844860:intron | 35.0% |
| TATTCCTGAGTTCGATTCAT+GGG | + | chr5_4:23493097-23493116 | None:intergenic | 35.0% | |
| ATATTCCTGAGTTCGATTCA+TGG | + | chr5_4:23493098-23493117 | None:intergenic | 35.0% | |
| CCAGTTATAGCAACTAGAAA+GGG | + | chr5_4:23493275-23493294 | None:intergenic | 35.0% | |
| TAGTTGCTATAACTGGCTAT+AGG | - | chr5_4:23493279-23493298 | Msa0844860:intron | 35.0% | |
| ! | CATGTCATAAGCTCTTTTCA+CGG | - | chr5_4:23493481-23493500 | Msa0844860:intron | 35.0% |
| ! | ATGTCATAAGCTCTTTTCAC+GGG | - | chr5_4:23493482-23493501 | Msa0844860:intron | 35.0% |
| CGGCCTATATTTATCTAGTT+GGG | + | chr5_4:23493512-23493531 | None:intergenic | 35.0% | |
| CCAACTAGATAAATATAGGC+CGG | - | chr5_4:23493510-23493529 | Msa0844860:intron | 35.0% | |
| TAGATAAATATAGGCCGGTT+TGG | - | chr5_4:23493515-23493534 | Msa0844860:intron | 35.0% | |
| ATACGCTATATTGGAGAACT+TGG | - | chr5_4:23493662-23493681 | Msa0844860:intron | 35.0% | |
| !!! | TTTTTTGGGCCTGTTTGTAT+TGG | + | chr5_4:23493790-23493809 | None:intergenic | 35.0% |
| TACAAACAGGCCCAAAAAAT+TGG | - | chr5_4:23493791-23493810 | Msa0844860:intron | 35.0% | |
| TTCGAAAATGCACTTGAAAG+AGG | - | chr5_4:23494030-23494049 | Msa0844860:CDS | 35.0% | |
| GTTCAACTTTGCCTTAGATT+CGG | - | chr5_4:23494081-23494100 | Msa0844860:intron | 35.0% | |
| CAAACCATAGTAATGAATGG+GGG | - | chr5_4:23494143-23494162 | Msa0844860:intron | 35.0% | |
| ! | AGGTAATTTGTCATCTCTTG+TGG | - | chr5_4:23494271-23494290 | Msa0844860:intron | 35.0% |
| TTATGGTTACATGTGGTTGA+AGG | - | chr5_4:23494322-23494341 | Msa0844860:intron | 35.0% | |
| TGATATTCCTTCAACTGAGT+TGG | - | chr5_4:23494821-23494840 | Msa0844860:intron | 35.0% | |
| TATTTCACCAACTCAGTTGA+AGG | + | chr5_4:23494831-23494850 | None:intergenic | 35.0% | |
| GTTGAAGCATACTATACTGT+AGG | - | chr5_4:23494962-23494981 | Msa0844860:intron | 35.0% | |
| !!! | TAGTTGTTTTTAGGCCAATG+AGG | + | chr5_4:23495249-23495268 | None:intergenic | 35.0% |
| ACTTCAATTCCCACATTACA+TGG | - | chr5_4:23495318-23495337 | Msa0844860:intron | 35.0% | |
| CAATCACAAAGTTTCTGATG+TGG | - | chr5_4:23495395-23495414 | Msa0844860:intron | 35.0% | |
| AGCTATACATAGCTCAAGTT+CGG | - | chr5_4:23495708-23495727 | Msa0844860:intron | 35.0% | |
| CAACTCAAATTCGACTCATT+TGG | - | chr5_4:23495757-23495776 | Msa0844860:intron | 35.0% | |
| ! | CTCGAAAATAGTTTGAGACT+TGG | + | chr5_4:23495817-23495836 | None:intergenic | 35.0% |
| !!! | GTCTCAAACTATTTTCGAGT+TGG | - | chr5_4:23495818-23495837 | Msa0844860:intron | 35.0% |
| GACTCTTAAACAGTATAGCA+GGG | + | chr5_4:23495860-23495879 | None:intergenic | 35.0% | |
| TGACTCTTAAACAGTATAGC+AGG | + | chr5_4:23495861-23495880 | None:intergenic | 35.0% | |
| GACATTCACAATCGCTTTAT+AGG | + | chr5_4:23495942-23495961 | None:intergenic | 35.0% | |
| CTTAATTATCCAAAGTCCCT+AGG | + | chr5_4:23496154-23496173 | None:intergenic | 35.0% | |
| GTTCAAAAGTTGTCAAAGAG+TGG | + | chr5_4:23496202-23496221 | None:intergenic | 35.0% | |
| TCATTACTCAGCAAGAGAAA+TGG | - | chr5_4:23496354-23496373 | Msa0844860:intron | 35.0% | |
| AAAAACTGTTGCAGTTTGGT+AGG | + | chr5_4:23496423-23496442 | None:intergenic | 35.0% | |
| TTGCAGTCTCATATAATGTG+GGG | + | chr5_4:23496537-23496556 | None:intergenic | 35.0% | |
| CTTGCAGTCTCATATAATGT+GGG | + | chr5_4:23496538-23496557 | None:intergenic | 35.0% | |
| ! | TTCTCAATGTTTTTCATGGC+AGG | - | chr5_4:23496736-23496755 | Msa0844860:intron | 35.0% |
| ! | GACCCAGAGAATTCAAATTT+TGG | - | chr5_4:23496775-23496794 | Msa0844860:intron | 35.0% |
| TAAGATGGCACAGTCAATTA+AGG | - | chr5_4:23496820-23496839 | Msa0844860:intron | 35.0% | |
| ! | CATGTGACCAAACAGATTTT+TGG | - | chr5_4:23496904-23496923 | Msa0844860:intron | 35.0% |
| AAGCCATTCTGTAACCAATA+GGG | + | chr5_4:23497165-23497184 | None:intergenic | 35.0% | |
| TAAGCCATTCTGTAACCAAT+AGG | + | chr5_4:23497166-23497185 | None:intergenic | 35.0% | |
| !!! | AAGAAGGGTATTTTGGAGTT+AGG | - | chr5_4:23497601-23497620 | Msa0844860:intron | 35.0% |
| ACTGAGAGAAGAGTAAACAA+TGG | - | chr5_4:23497796-23497815 | Msa0844860:intron | 35.0% | |
| TTGCAGGAAGTTGCAAATAT+GGG | - | chr5_4:23498246-23498265 | Msa0844860:intron | 35.0% | |
| GGTAATAACAGGTTAATGCA+GGG | + | chr5_4:23498389-23498408 | None:intergenic | 35.0% | |
| CTGAAACATTCGGTAATAAC+AGG | + | chr5_4:23498400-23498419 | None:intergenic | 35.0% | |
| CCGAATGTTTCAGTTATGTA+TGG | - | chr5_4:23498407-23498426 | Msa0844860:intron | 35.0% | |
| ACATTTCTTGATCCATCTAG+TGG | - | chr5_4:23498832-23498851 | Msa0844860:intron | 35.0% | |
| ! | GTCTGTCATTTGATAATACG+GGG | - | chr5_4:23499018-23499037 | Msa0844860:intron | 35.0% |
| AATGTCCTGCTTTCATAACT+TGG | - | chr5_4:23499071-23499090 | Msa0844860:intron | 35.0% | |
| AAACTCCAAGTTATGAAAGC+AGG | + | chr5_4:23499079-23499098 | None:intergenic | 35.0% | |
| AGTCATTGTCCAGTTTAGAT+AGG | - | chr5_4:23499159-23499178 | Msa0844860:intron | 35.0% | |
| GCTAAATCAAACCTCAACAA+CGG | + | chr5_4:23499242-23499261 | None:intergenic | 35.0% | |
| ! | TTACAATATTTTCCCCCATG+TGG | - | chr5_4:23499275-23499294 | Msa0844860:intron | 35.0% |
| TGTTATGCATCTTTCCACAT+GGG | + | chr5_4:23499292-23499311 | None:intergenic | 35.0% | |
| ATGTTATGCATCTTTCCACA+TGG | + | chr5_4:23499293-23499312 | None:intergenic | 35.0% | |
| GTATAGAAAATAAGGAACCC+TGG | + | chr5_4:23499347-23499366 | None:intergenic | 35.0% | |
| !!! | TTCCTTATTTTCTATACCCC+AGG | - | chr5_4:23499350-23499369 | Msa0844860:intron | 35.0% |
| !!! | TCCTTATTTTCTATACCCCA+GGG | - | chr5_4:23499351-23499370 | Msa0844860:intron | 35.0% |
| !! | AACATTTAGGGTCATTTTGG+TGG | - | chr5_4:23499586-23499605 | Msa0844860:intron | 35.0% |
| AGCAAGATATGCTAAATGAC+AGG | + | chr5_4:23499638-23499657 | None:intergenic | 35.0% | |
| GCTGCAGCATCATTTATTTA+TGG | + | chr5_4:23499841-23499860 | None:intergenic | 35.0% | |
| !! | TGATCATGCTTTGATTTTGC+AGG | - | chr5_4:23500046-23500065 | Msa0844860:intron | 35.0% |
| !! | GATCATGCTTTGATTTTGCA+GGG | - | chr5_4:23500047-23500066 | Msa0844860:intron | 35.0% |
| CAAAAGCAATTGGCATAAAC+AGG | + | chr5_4:23500346-23500365 | None:intergenic | 35.0% | |
| !! | ATGCCAATTGCTTTTGAATG+TGG | - | chr5_4:23500350-23500369 | Msa0844860:intron | 35.0% |
| ATGCCACATTCAAAAGCAAT+TGG | + | chr5_4:23500356-23500375 | None:intergenic | 35.0% | |
| !! | TTGCTTTTGAATGTGGCATT+TGG | - | chr5_4:23500357-23500376 | Msa0844860:intron | 35.0% |
| ACTATGATAAGCCATAGCCA+TGG | + | chr5_4:23492614-23492633 | None:intergenic | 40.0% | |
| ATGGCTATGGCTTATCATAG+TGG | - | chr5_4:23492613-23492632 | Msa0844860:three_prime_UTR | 40.0% | |
| ! | TGGCTTATCATAGTGGAATC+GGG | - | chr5_4:23492620-23492639 | Msa0844860:three_prime_UTR | 40.0% |
| !! | GAAGAAGGAAGTACCAGTTA+CGG | + | chr5_4:23492668-23492687 | None:intergenic | 40.0% |
| AGAGAGGAAGAAGAAGAAGA+AGG | + | chr5_4:23492683-23492702 | None:intergenic | 40.0% | |
| !!! | TTTGCCGTTTTTGAAGAGGA+CGG | + | chr5_4:23492778-23492797 | None:intergenic | 40.0% |
| TGATTTGATCGGTGATCTTC+AGG | - | chr5_4:23492803-23492822 | Msa0844860:three_prime_UTR | 40.0% | |
| !!! | TTTTTTTTTTTTGGGGCGGG+GGG | - | chr5_4:23493026-23493045 | Msa0844860:intron | 40.0% |
| TCCAAATTTGTGGGAGCAAA+AGG | + | chr5_4:23493167-23493186 | None:intergenic | 40.0% | |
| ! | GTTTTTGCGGTGTGATCATT+CGG | - | chr5_4:23493218-23493237 | Msa0844860:intron | 40.0% |
| !! | CCCTTTCTAGTTGCTATAAC+TGG | - | chr5_4:23493272-23493291 | Msa0844860:intron | 40.0% |
| GCCAGTTATAGCAACTAGAA+AGG | + | chr5_4:23493276-23493295 | None:intergenic | 40.0% | |
| GATGGAGAGCTTATGGTAAT+AGG | - | chr5_4:23493440-23493459 | Msa0844860:intron | 40.0% | |
| CCGGCCTATATTTATCTAGT+TGG | + | chr5_4:23493513-23493532 | None:intergenic | 40.0% | |
| ! | GCTTATTTGAGGTTACGTAC+TGG | + | chr5_4:23493768-23493787 | None:intergenic | 40.0% |
| TGAACCCCCATTCATTACTA+TGG | + | chr5_4:23494150-23494169 | None:intergenic | 40.0% | |
| ATAGTAATGAATGGGGGTTC+AGG | - | chr5_4:23494149-23494168 | Msa0844860:intron | 40.0% | |
| GTTACATGTGGTTGAAGGTA+TGG | - | chr5_4:23494327-23494346 | Msa0844860:intron | 40.0% | |
| ! | TTGAAGGTATGGAACTGCTT+CGG | - | chr5_4:23494338-23494357 | Msa0844860:intron | 40.0% |
| TGATATTGAGAAGGAGAACG+CGG | + | chr5_4:23494547-23494566 | None:intergenic | 40.0% | |
| CGTTCTCCTTCTCAATATCA+GGG | - | chr5_4:23494547-23494566 | Msa0844860:intron | 40.0% | |
| ATGAGTGAACTTAGTTCAGC+CGG | - | chr5_4:23494992-23495011 | Msa0844860:intron | 40.0% | |
| CGACTCGATAAGAATCAAGT+CGG | - | chr5_4:23495018-23495037 | Msa0844860:intron | 40.0% | |
| !!! | TGTCAATTACCATCGGCTTT+TGG | - | chr5_4:23495529-23495548 | Msa0844860:intron | 40.0% |
| GGTAGTTAATTCGTCGAACA+TGG | + | chr5_4:23495791-23495810 | None:intergenic | 40.0% | |
| AATCGCTTTATAGGCCTTGA+TGG | + | chr5_4:23495933-23495952 | None:intergenic | 40.0% | |
| AAAGCGATTGTGAATGTCAG+AGG | - | chr5_4:23495944-23495963 | Msa0844860:intron | 40.0% | |
| AAGCGATTGTGAATGTCAGA+GGG | - | chr5_4:23495945-23495964 | Msa0844860:intron | 40.0% | |
| GCCAACTTCATGAAAACCTA+TGG | - | chr5_4:23496009-23496028 | Msa0844860:intron | 40.0% | |
| ! | GCCATAGGTTTTCATGAAGT+TGG | + | chr5_4:23496013-23496032 | None:intergenic | 40.0% |
| GTTTAGAGATTACTGCGTAC+TGG | + | chr5_4:23496047-23496066 | None:intergenic | 40.0% | |
| TCTTGGAATAGTTGAGGTCA+TGG | + | chr5_4:23496069-23496088 | None:intergenic | 40.0% | |
| AGATAGGCCTCTATATGTCT+TGG | + | chr5_4:23496086-23496105 | None:intergenic | 40.0% | |
| ! | AGGCCTATCTCTTTTAACAC+TGG | - | chr5_4:23496096-23496115 | Msa0844860:CDS | 40.0% |
| AGAGAGAAAAAGGAAGAGAG+AGG | + | chr5_4:23496259-23496278 | None:intergenic | 40.0% | |
| ! | GGAGGCTTATTATAGTTTGC+CGG | + | chr5_4:23496402-23496421 | None:intergenic | 40.0% |
| TCTTAAAACGGGTACACATG+AGG | - | chr5_4:23496468-23496487 | Msa0844860:intron | 40.0% | |
| AATTTCCCTTAATCCTCCAC+CGG | - | chr5_4:23496497-23496516 | Msa0844860:intron | 40.0% | |
| GCTTGCAGTCTCATATAATG+TGG | + | chr5_4:23496539-23496558 | None:intergenic | 40.0% | |
| TGTCCTTAATATGAGGGATG+TGG | - | chr5_4:23496566-23496585 | Msa0844860:intron | 40.0% | |
| TTTACCCACATTTGCCACAT+TGG | - | chr5_4:23496593-23496612 | Msa0844860:intron | 40.0% | |
| CTTTATATAGGTGCAAGTGC+AGG | + | chr5_4:23496881-23496900 | None:intergenic | 40.0% | |
| ! | GAACCCTATTGGTTACAGAA+TGG | - | chr5_4:23497159-23497178 | Msa0844860:intron | 40.0% |
| TGTTGGGCTCTCTGATTATA+AGG | - | chr5_4:23497242-23497261 | Msa0844860:intron | 40.0% | |
| TCAATTCCATTATCCAGGAC+TGG | + | chr5_4:23497339-23497358 | None:intergenic | 40.0% | |
| ATGGGATGAAAGTAATGCTG+TGG | - | chr5_4:23497410-23497429 | Msa0844860:intron | 40.0% | |
| TACGTTGTATATACCCTCTC+AGG | - | chr5_4:23498031-23498050 | Msa0844860:intron | 40.0% | |
| TTGTATATACCCTCTCAGGA+TGG | - | chr5_4:23498035-23498054 | Msa0844860:intron | 40.0% | |
| GAATTCAGTGCTTGAGAATC+AGG | - | chr5_4:23498064-23498083 | Msa0844860:intron | 40.0% | |
| TTCAATGCCTGGGAAGAAAA+TGG | - | chr5_4:23498180-23498199 | Msa0844860:intron | 40.0% | |
| TCAATGCCTGGGAAGAAAAT+GGG | - | chr5_4:23498181-23498200 | Msa0844860:intron | 40.0% | |
| TGATTTAACTGTGTGGTTGC+AGG | - | chr5_4:23498230-23498249 | Msa0844860:intron | 40.0% | |
| GTTGCAGGAAGTTGCAAATA+TGG | - | chr5_4:23498245-23498264 | Msa0844860:intron | 40.0% | |
| GGAAGTTGCAAATATGGGAT+TGG | - | chr5_4:23498251-23498270 | Msa0844860:intron | 40.0% | |
| CGGTAATAACAGGTTAATGC+AGG | + | chr5_4:23498390-23498409 | None:intergenic | 40.0% | |
| !! | ATCGATAGTGGAAACCAAAC+AGG | - | chr5_4:23498767-23498786 | Msa0844860:CDS | 40.0% |
| TCTAGATACAAGGTCCTGTT+TGG | + | chr5_4:23498784-23498803 | None:intergenic | 40.0% | |
| !! | TTTTCAGGGAACTATGCCAA+AGG | - | chr5_4:23498881-23498900 | Msa0844860:intron | 40.0% |
| !!! | GGAAGTTTTGGTTGTTCCTT+TGG | + | chr5_4:23498900-23498919 | None:intergenic | 40.0% |
| AAGGAACAACCAAAACTTCC+AGG | - | chr5_4:23498900-23498919 | Msa0844860:intron | 40.0% | |
| AGGAACAACCAAAACTTCCA+GGG | - | chr5_4:23498901-23498920 | Msa0844860:intron | 40.0% | |
| ACTAGTATGCTCACATATCC+AGG | - | chr5_4:23498930-23498949 | Msa0844860:intron | 40.0% | |
| TAGAAGAACACCTGAAATCC+TGG | + | chr5_4:23498951-23498970 | None:intergenic | 40.0% | |
| AAGCAGGACATTAAAGCATG+TGG | + | chr5_4:23499063-23499082 | None:intergenic | 40.0% | |
| ! | ATGATTCCGTTTTCACTTGC+AGG | - | chr5_4:23499118-23499137 | Msa0844860:intron | 40.0% |
| ! | TGATTCCGTTTTCACTTGCA+GGG | - | chr5_4:23499119-23499138 | Msa0844860:intron | 40.0% |
| TAAGACCCTGCAAGTGAAAA+CGG | + | chr5_4:23499127-23499146 | None:intergenic | 40.0% | |
| TGAAGCTGACCTATCTAAAC+TGG | + | chr5_4:23499171-23499190 | None:intergenic | 40.0% | |
| AGCTTCAGATACTATTGTGC+CGG | - | chr5_4:23499184-23499203 | Msa0844860:intron | 40.0% | |
| TCTAGATTATCCAAACCACC+CGG | + | chr5_4:23499206-23499225 | None:intergenic | 40.0% | |
| ATAATCTAGAGAAGCAGCGA+AGG | - | chr5_4:23499216-23499235 | Msa0844860:intron | 40.0% | |
| TTATGCATCTTTCCACATGG+GGG | + | chr5_4:23499290-23499309 | None:intergenic | 40.0% | |
| GTTATGCATCTTTCCACATG+GGG | + | chr5_4:23499291-23499310 | None:intergenic | 40.0% | |
| TCCCTGGGGTATAGAAAATA+AGG | + | chr5_4:23499355-23499374 | None:intergenic | 40.0% | |
| ! | TTATTTTCTATACCCCAGGG+AGG | - | chr5_4:23499354-23499373 | Msa0844860:intron | 40.0% |
| AGGATGAAAGCTCTTTGTGA+AGG | - | chr5_4:23499494-23499513 | Msa0844860:intron | 40.0% | |
| GGATGAAAGCTCTTTGTGAA+GGG | - | chr5_4:23499495-23499514 | Msa0844860:intron | 40.0% | |
| ! | AAGGCAAATTTTCCTCTGCT+TGG | - | chr5_4:23499863-23499882 | Msa0844860:intron | 40.0% |
| TGAAAACTCTGATTGACCTC+AGG | - | chr5_4:23499938-23499957 | Msa0844860:intron | 40.0% | |
| TGAGTTAACACAAGTTCCTG+AGG | + | chr5_4:23499957-23499976 | None:intergenic | 40.0% | |
| CACAACAGAAAGTCATTAGC+AGG | + | chr5_4:23500188-23500207 | None:intergenic | 40.0% | |
| TATATGCTTGCAGGGAAGGA+AGG | + | chr5_4:23492518-23492537 | None:intergenic | 45.0% | |
| TAGCTATATGCTTGCAGGGA+AGG | + | chr5_4:23492522-23492541 | None:intergenic | 45.0% | |
| TGCGTAGCTATATGCTTGCA+GGG | + | chr5_4:23492526-23492545 | None:intergenic | 45.0% | |
| TTGCGTAGCTATATGCTTGC+AGG | + | chr5_4:23492527-23492546 | None:intergenic | 45.0% | |
| !! | TCACTTTTCCGCTCCTTTTC+AGG | - | chr5_4:23492741-23492760 | Msa0844860:three_prime_UTR | 45.0% |
| CTGTGTAACCTGAAAAGGAG+CGG | + | chr5_4:23492752-23492771 | None:intergenic | 45.0% | |
| !!! | TTTTTTTTTTTGGGGCGGGG+GGG | - | chr5_4:23493027-23493046 | Msa0844860:intron | 45.0% |
| TCGTAATCCAGAGTTCCACT+GGG | - | chr5_4:23493062-23493081 | Msa0844860:intron | 45.0% | |
| !! | GTGGGAGCAAAAGGCATTTA+TGG | + | chr5_4:23493158-23493177 | None:intergenic | 45.0% |
| ! | GCCTTTTGCTCCCACAAATT+TGG | - | chr5_4:23493163-23493182 | Msa0844860:intron | 45.0% |
| TTACCATAAGCTCTCCATCC+AGG | + | chr5_4:23493439-23493458 | None:intergenic | 45.0% | |
| TGCTCATAGGCACTAGTGAA+AGG | - | chr5_4:23493901-23493920 | Msa0844860:intron | 45.0% | |
| GCTCATAGGCACTAGTGAAA+GGG | - | chr5_4:23493902-23493921 | Msa0844860:intron | 45.0% | |
| ATAGGCACTAGTGAAAGGGT+TGG | - | chr5_4:23493906-23493925 | Msa0844860:intron | 45.0% | |
| GTGAAAGGGTTGGAAAAGTC+CGG | - | chr5_4:23493916-23493935 | Msa0844860:intron | 45.0% | |
| TGAAAGGGTTGGAAAAGTCC+GGG | - | chr5_4:23493917-23493936 | Msa0844860:intron | 45.0% | |
| ! | GTTTGTTACCTGAGCAGCAA+TGG | + | chr5_4:23493980-23493999 | None:intergenic | 45.0% |
| TTGCTGCTCAGGTAACAAAC+TGG | - | chr5_4:23493980-23493999 | Msa0844860:CDS | 45.0% | |
| TTTGCCTTAGATTCGGCGTT+TGG | - | chr5_4:23494088-23494107 | Msa0844860:intron | 45.0% | |
| TTAGCCAAACGCCGAATCTA+AGG | + | chr5_4:23494095-23494114 | None:intergenic | 45.0% | |
| CCACATGTAACCATAACCCA+CGG | + | chr5_4:23494318-23494337 | None:intergenic | 45.0% | |
| GCGTTCTCCTTCTCAATATC+AGG | - | chr5_4:23494546-23494565 | Msa0844860:intron | 45.0% | |
| GAAACGCCCTGATATTGAGA+AGG | + | chr5_4:23494556-23494575 | None:intergenic | 45.0% | |
| GTACGTGACTAAACGCAACA+TGG | - | chr5_4:23494591-23494610 | Msa0844860:intron | 45.0% | |
| AAAAAAGCTGCAGCATGCCT+CGG | - | chr5_4:23494636-23494655 | Msa0844860:CDS | 45.0% | |
| ACTTACAGCAATGACATCCG+AGG | + | chr5_4:23494656-23494675 | None:intergenic | 45.0% | |
| CATCAGCTCTTCCATTGGAA+GGG | - | chr5_4:23494773-23494792 | Msa0844860:intron | 45.0% | |
| AGGATTCCATACCCTTCCAA+TGG | + | chr5_4:23494787-23494806 | None:intergenic | 45.0% | |
| AGCATACTATACTGTAGGGC+TGG | - | chr5_4:23494967-23494986 | Msa0844860:intron | 45.0% | |
| TGAGTGAACTTAGTTCAGCC+GGG | - | chr5_4:23494993-23495012 | Msa0844860:intron | 45.0% | |
| ! | ATTCAAGTTCCCGAGCAACT+CGG | - | chr5_4:23495097-23495116 | Msa0844860:intron | 45.0% |
| ! | ATGAGAGTCTGTAGAGTGTC+TGG | - | chr5_4:23495466-23495485 | Msa0844860:intron | 45.0% |
| ! | TGAGAGTCTGTAGAGTGTCT+GGG | - | chr5_4:23495467-23495486 | Msa0844860:intron | 45.0% |
| CTTAAACAGTATAGCAGGGC+TGG | + | chr5_4:23495856-23495875 | None:intergenic | 45.0% | |
| AGCGATTGTGAATGTCAGAG+GGG | - | chr5_4:23495946-23495965 | Msa0844860:intron | 45.0% | |
| !! | CTGGTGTCATTGATTGCCAT+AGG | + | chr5_4:23496028-23496047 | None:intergenic | 45.0% |
| CTTACATACCCTAGGGACTT+TGG | - | chr5_4:23496142-23496161 | Msa0844860:CDS | 45.0% | |
| AACTGTTGCAGTTTGGTAGG+AGG | + | chr5_4:23496420-23496439 | None:intergenic | 45.0% | |
| TGGGGTTTACCTTACTCTAC+CGG | + | chr5_4:23496519-23496538 | None:intergenic | 45.0% | |
| CTGCCACATCCCTCATATTA+AGG | + | chr5_4:23496572-23496591 | None:intergenic | 45.0% | |
| AGAAAAACAGTGGGCCAATG+TGG | + | chr5_4:23496610-23496629 | None:intergenic | 45.0% | |
| !! | ACATTGGCCCACTGTTTTTC+TGG | - | chr5_4:23496609-23496628 | Msa0844860:intron | 45.0% |
| TAGCAAGTGCTCGTCCTTAT+AGG | + | chr5_4:23497006-23497025 | None:intergenic | 45.0% | |
| CTGTGACTGTTGAACCCTAT+TGG | - | chr5_4:23497148-23497167 | Msa0844860:intron | 45.0% | |
| TTAAACTCTGCAGTTGTGCG+TGG | - | chr5_4:23497648-23497667 | Msa0844860:intron | 45.0% | |
| ATATACCCTCTCAGGATGGA+AGG | - | chr5_4:23498039-23498058 | Msa0844860:intron | 45.0% | |
| TTCAACCTTCCATCCTGAGA+GGG | + | chr5_4:23498047-23498066 | None:intergenic | 45.0% | |
| ATTCAACCTTCCATCCTGAG+AGG | + | chr5_4:23498048-23498067 | None:intergenic | 45.0% | |
| ! | TGATTGCCCATTTTCTTCCC+AGG | + | chr5_4:23498190-23498209 | None:intergenic | 45.0% |
| ! | GCTTTATTACGGCAAATGCC+CGG | - | chr5_4:23498286-23498305 | Msa0844860:CDS | 45.0% |
| AACAACCAAAACTTCCAGGG+AGG | - | chr5_4:23498904-23498923 | Msa0844860:intron | 45.0% | |
| GCTCACATATCCAGGATTTC+AGG | - | chr5_4:23498938-23498957 | Msa0844860:intron | 45.0% | |
| CAGGACATTAAAGCATGTGG+AGG | + | chr5_4:23499060-23499079 | None:intergenic | 45.0% | |
| GCTTCAGATACTATTGTGCC+GGG | - | chr5_4:23499185-23499204 | Msa0844860:intron | 45.0% | |
| TGGCACCTGTCTAAATTCCA+GGG | - | chr5_4:23499327-23499346 | Msa0844860:intron | 45.0% | |
| AGGAACCCTGGAATTTAGAC+AGG | + | chr5_4:23499335-23499354 | None:intergenic | 45.0% | |
| AATCACTCTTCAACCTCCCT+GGG | + | chr5_4:23499370-23499389 | None:intergenic | 45.0% | |
| TAATCACTCTTCAACCTCCC+TGG | + | chr5_4:23499371-23499390 | None:intergenic | 45.0% | |
| ! | TAGCATCTGTGGACTGCTAA+AGG | - | chr5_4:23499803-23499822 | Msa0844860:intron | 45.0% |
| ATAAATGATGCTGCAGCGGA+AGG | - | chr5_4:23499844-23499863 | Msa0844860:intron | 45.0% | |
| ACGGAAAGAATACCAAGCAG+AGG | + | chr5_4:23499878-23499897 | None:intergenic | 45.0% | |
| !! | CTACTTCGACCAAGTGTTGA+TGG | - | chr5_4:23500070-23500089 | Msa0844860:intron | 45.0% |
| !! | ATATATATATATATATATGA+TGG | - | chr5_4:23497391-23497410 | Msa0844860:intron | 5.0% |
| !! | TATATATATATATATATGAT+GGG | - | chr5_4:23497392-23497411 | Msa0844860:intron | 5.0% |
| GATTTCAGCGACCTGTGTGA+AGG | + | chr5_4:23492552-23492571 | None:intergenic | 50.0% | |
| TCTCTCTCTCTCTAACGCCA+TGG | - | chr5_4:23492594-23492613 | Msa0844860:three_prime_UTR | 50.0% | |
| TCTCTCTAACGCCATGGCTA+TGG | - | chr5_4:23492600-23492619 | Msa0844860:three_prime_UTR | 50.0% | |
| TAGTGGAATCGGGATCTCCA+AGG | - | chr5_4:23492630-23492649 | Msa0844860:three_prime_UTR | 50.0% | |
| TACCAGTTACGGCGATGAAG+AGG | + | chr5_4:23492657-23492676 | None:intergenic | 50.0% | |
| CGATTGTGTGTGTGAGAGAG+AGG | + | chr5_4:23492699-23492718 | None:intergenic | 50.0% | |
| !!! | CGCTCCTTTTCAGGTTACAC+AGG | - | chr5_4:23492750-23492769 | Msa0844860:three_prime_UTR | 50.0% |
| GGTGCCTGTGTAACCTGAAA+AGG | + | chr5_4:23492757-23492776 | None:intergenic | 50.0% | |
| GGCACCGTCCTCTTCAAAAA+CGG | - | chr5_4:23492771-23492790 | Msa0844860:three_prime_UTR | 50.0% | |
| !!! | TTTTTTTTTTGGGGCGGGGG+GGG | - | chr5_4:23493028-23493047 | Msa0844860:intron | 50.0% |
| CAGTGGAACTCTGGATTACG+AGG | + | chr5_4:23493063-23493082 | None:intergenic | 50.0% | |
| CTCGTAATCCAGAGTTCCAC+TGG | - | chr5_4:23493061-23493080 | Msa0844860:intron | 50.0% | |
| GAACAATCCCAGTGGAACTC+TGG | + | chr5_4:23493072-23493091 | None:intergenic | 50.0% | |
| TCCACCCATGAATCGAACTC+AGG | - | chr5_4:23493090-23493109 | Msa0844860:intron | 50.0% | |
| TCCTGAGTTCGATTCATGGG+TGG | + | chr5_4:23493094-23493113 | None:intergenic | 50.0% | |
| GATGCTTTCGTAAGCCATCC+TGG | - | chr5_4:23493418-23493437 | Msa0844860:intron | 50.0% | |
| CTTTCGTAAGCCATCCTGGA+TGG | - | chr5_4:23493422-23493441 | Msa0844860:intron | 50.0% | |
| CATAAGCTCTCCATCCAGGA+TGG | + | chr5_4:23493435-23493454 | None:intergenic | 50.0% | |
| CATCCTGGATGGAGAGCTTA+TGG | - | chr5_4:23493433-23493452 | Msa0844860:intron | 50.0% | |
| GAAAGGGTTGGAAAAGTCCG+GGG | - | chr5_4:23493918-23493937 | Msa0844860:intron | 50.0% | |
| TACCTGAGCAGCAATGGCAT+CGG | + | chr5_4:23493974-23493993 | None:intergenic | 50.0% | |
| ! | CCGTGGGTTATGGTTACATG+TGG | - | chr5_4:23494315-23494334 | Msa0844860:intron | 50.0% |
| CCTTCCAATGGAAGAGCTGA+TGG | + | chr5_4:23494775-23494794 | None:intergenic | 50.0% | |
| CCATCAGCTCTTCCATTGGA+AGG | - | chr5_4:23494772-23494791 | Msa0844860:intron | 50.0% | |
| GCTCTTCCATTGGAAGGGTA+TGG | - | chr5_4:23494778-23494797 | Msa0844860:intron | 50.0% | |
| GATTCTTATCGAGTCGAGCC+CGG | + | chr5_4:23495014-23495033 | None:intergenic | 50.0% | |
| AATCGAGTCGAGTTCGAGCT+AGG | + | chr5_4:23495080-23495099 | None:intergenic | 50.0% | |
| CTCTACCGGTGGAGGATTAA+GGG | + | chr5_4:23496505-23496524 | None:intergenic | 50.0% | |
| ACTCTACCGGTGGAGGATTA+AGG | + | chr5_4:23496506-23496525 | None:intergenic | 50.0% | |
| AATCCTCCACCGGTAGAGTA+AGG | - | chr5_4:23496507-23496526 | Msa0844860:intron | 50.0% | |
| TTACCTTACTCTACCGGTGG+AGG | + | chr5_4:23496513-23496532 | None:intergenic | 50.0% | |
| GGTTTACCTTACTCTACCGG+TGG | + | chr5_4:23496516-23496535 | None:intergenic | 50.0% | |
| TGGGCCAATGTGGCAAATGT+GGG | + | chr5_4:23496600-23496619 | None:intergenic | 50.0% | |
| CTATGTTCCACTTCCAGTCC+TGG | - | chr5_4:23497323-23497342 | Msa0844860:intron | 50.0% | |
| CCATTATCCAGGACTGGAAG+TGG | + | chr5_4:23497333-23497352 | None:intergenic | 50.0% | |
| CCACTTCCAGTCCTGGATAA+TGG | - | chr5_4:23497330-23497349 | Msa0844860:intron | 50.0% | |
| GCAACACACAGTGGCAATGT+TGG | - | chr5_4:23497511-23497530 | Msa0844860:intron | 50.0% | |
| AGTTGTGCGTGGAGGATATC+CGG | - | chr5_4:23497659-23497678 | Msa0844860:intron | 50.0% | |
| ATACCCACCTGCAAAGAGTC+CGG | + | chr5_4:23498318-23498337 | None:intergenic | 50.0% | |
| ! | GTAGACCTCCCTGGAAGTTT+TGG | + | chr5_4:23498912-23498931 | None:intergenic | 50.0% |
| AGCATACTAGTAGACCTCCC+TGG | + | chr5_4:23498921-23498940 | None:intergenic | 50.0% | |
| TCAGATACTATTGTGCCGGG+TGG | - | chr5_4:23499188-23499207 | Msa0844860:intron | 50.0% | |
| TACTATTGTGCCGGGTGGTT+TGG | - | chr5_4:23499193-23499212 | Msa0844860:intron | 50.0% | |
| GTGGCACCTGTCTAAATTCC+AGG | - | chr5_4:23499326-23499345 | Msa0844860:intron | 50.0% | |
| ATCACTCTTCAACCTCCCTG+GGG | + | chr5_4:23499369-23499388 | None:intergenic | 50.0% | |
| CAAGGCAGTGATAGCATCTG+TGG | - | chr5_4:23499792-23499811 | Msa0844860:intron | 50.0% | |
| !! | TCGACCAAGTGTTGATGGCA+AGG | - | chr5_4:23500075-23500094 | Msa0844860:intron | 50.0% |
| GAGACCTTGCCATCAACACT+TGG | + | chr5_4:23500082-23500101 | None:intergenic | 50.0% | |
| ! | CTGCCACGATGACCTCGTTT+TGG | + | chr5_4:23492479-23492498 | None:intergenic | 55.0% |
| GCTACGCAAAGCCTTCACAC+AGG | - | chr5_4:23492538-23492557 | Msa0844860:three_prime_UTR | 55.0% | |
| TACGGCGATGAAGAGGACCT+TGG | + | chr5_4:23492650-23492669 | None:intergenic | 55.0% | |
| GTCCTCTTCATCGCCGTAAC+TGG | - | chr5_4:23492652-23492671 | Msa0844860:three_prime_UTR | 55.0% | |
| !!! | TTTTTTTTTGGGGCGGGGGG+GGG | - | chr5_4:23493029-23493048 | Msa0844860:intron | 55.0% |
| CATGGGTGGAACAATCCCAG+TGG | + | chr5_4:23493080-23493099 | None:intergenic | 55.0% | |
| GTTGGAAAAGTCCGGGGATC+AGG | - | chr5_4:23493924-23493943 | Msa0844860:intron | 55.0% | |
| TTCACCTTCAGCCTGATCCC+CGG | + | chr5_4:23493938-23493957 | None:intergenic | 55.0% | |
| CGCACCATCAGCTCTTCCAT+TGG | - | chr5_4:23494768-23494787 | Msa0844860:intron | 55.0% | |
| TCGAGTCGAACCGAGTTGCT+CGG | + | chr5_4:23495110-23495129 | None:intergenic | 55.0% | |
| GTGGGCCAATGTGGCAAATG+TGG | + | chr5_4:23496601-23496620 | None:intergenic | 55.0% | |
| AACTCTGCAGTTGTGCGTGG+AGG | - | chr5_4:23497651-23497670 | Msa0844860:intron | 55.0% | |
| !!! | TTTTTTTTGGGGCGGGGGGG+GGG | - | chr5_4:23493030-23493049 | Msa0844860:intron | 60.0% |
| AAGTCCGGGGATCAGGCTGA+AGG | - | chr5_4:23493931-23493950 | Msa0844860:intron | 60.0% | |
| GGGGATCAGGCTGAAGGTGA+AGG | - | chr5_4:23493937-23493956 | Msa0844860:intron | 60.0% | |
| ! | CTGAGCAGCAATGGCATCGG+CGG | + | chr5_4:23493971-23493990 | None:intergenic | 60.0% |
| TGTGGTTCCAGCTGCCACCT+TGG | - | chr5_4:23494289-23494308 | Msa0844860:intron | 60.0% | |
| GTGGTTCCAGCTGCCACCTT+GGG | - | chr5_4:23494290-23494309 | Msa0844860:intron | 60.0% | |
| ATAACCCACGGCACCCAAGG+TGG | + | chr5_4:23494306-23494325 | None:intergenic | 60.0% | |
| ! | ACCTTGGGTGCCGTGGGTTA+TGG | - | chr5_4:23494305-23494324 | Msa0844860:intron | 60.0% |
| ACCATAACCCACGGCACCCA+AGG | + | chr5_4:23494309-23494328 | None:intergenic | 60.0% | |
| CGAGTCGAACCGAGTTGCTC+GGG | + | chr5_4:23495109-23495128 | None:intergenic | 60.0% | |
| ! | GAGCGTCGTGCAACACACAG+TGG | - | chr5_4:23497502-23497521 | Msa0844860:intron | 60.0% |
| CAAAGAGTCCGGCACTCTCC+GGG | + | chr5_4:23498307-23498326 | None:intergenic | 60.0% | |
| GCAAAGAGTCCGGCACTCTC+CGG | + | chr5_4:23498308-23498327 | None:intergenic | 60.0% | |
| !! | GAGAGTGCCGGACTCTTTGC+AGG | - | chr5_4:23498308-23498327 | Msa0844860:CDS | 60.0% |
| ! | AGTGCCGGACTCTTTGCAGG+TGG | - | chr5_4:23498311-23498330 | Msa0844860:CDS | 60.0% |
| GTGCCGGACTCTTTGCAGGT+GGG | - | chr5_4:23498312-23498331 | Msa0844860:CDS | 60.0% | |
| AGCAGCGAAGGCCGTTGTTG+AGG | - | chr5_4:23499228-23499247 | Msa0844860:intron | 60.0% | |
| !!! | TTTTTTTGGGGCGGGGGGGG+GGG | - | chr5_4:23493031-23493050 | Msa0844860:intron | 65.0% |
| CGCCGATGCCATTGCTGCTC+AGG | - | chr5_4:23493969-23493988 | Msa0844860:intron | 65.0% | |
| ! | GGCAAATGCCCGGAGAGTGC+CGG | - | chr5_4:23498296-23498315 | Msa0844860:CDS | 65.0% |
| !!! | TTTTTTGGGGCGGGGGGGGG+GGG | - | chr5_4:23493032-23493051 | Msa0844860:intron | 70.0% |
| ACGGCACCCAAGGTGGCAGC+TGG | + | chr5_4:23494299-23494318 | None:intergenic | 70.0% | |
| ! | AGCTGCCACCTTGGGTGCCG+TGG | - | chr5_4:23494298-23494317 | Msa0844860:intron | 70.0% |
| ! | GCTGCCACCTTGGGTGCCGT+GGG | - | chr5_4:23494299-23494318 | Msa0844860:intron | 70.0% |
| !!! | TTTTTGGGGCGGGGGGGGGG+GGG | - | chr5_4:23493033-23493052 | Msa0844860:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 23492476 | 23500462 | 23492476 | ID=Msa0844860;Name=Msa0844860 |
| chr5_4 | mRNA | 23492476 | 23500462 | 23492476 | ID=Msa0844860-mRNA-1;Parent=Msa0844860;Name=Msa0844860-mRNA-1;_AED=0.05;_eAED=0.05;_QI=106|1|1|1|0.92|0.85|14|373|312 |
| chr5_4 | exon | 23492476 | 23492870 | 23492476 | ID=Msa0844860-mRNA-1:exon:9630;Parent=Msa0844860-mRNA-1 |
| chr5_4 | exon | 23493689 | 23493798 | 23493689 | ID=Msa0844860-mRNA-1:exon:9629;Parent=Msa0844860-mRNA-1 |
| chr5_4 | exon | 23493979 | 23494050 | 23493979 | ID=Msa0844860-mRNA-1:exon:9628;Parent=Msa0844860-mRNA-1 |
| chr5_4 | exon | 23494609 | 23494686 | 23494609 | ID=Msa0844860-mRNA-1:exon:9627;Parent=Msa0844860-mRNA-1 |
| chr5_4 | exon | 23494853 | 23494885 | 23494853 | ID=Msa0844860-mRNA-1:exon:9626;Parent=Msa0844860-mRNA-1 |
| chr5_4 | exon | 23495406 | 23495480 | 23495406 | ID=Msa0844860-mRNA-1:exon:9625;Parent=Msa0844860-mRNA-1 |
| chr5_4 | exon | 23496091 | 23496180 | 23496091 | ID=Msa0844860-mRNA-1:exon:9624;Parent=Msa0844860-mRNA-1 |
| chr5_4 | exon | 23498269 | 23498370 | 23498269 | ID=Msa0844860-mRNA-1:exon:9623;Parent=Msa0844860-mRNA-1 |
| chr5_4 | exon | 23498595 | 23498665 | 23498595 | ID=Msa0844860-mRNA-1:exon:9622;Parent=Msa0844860-mRNA-1 |
| chr5_4 | exon | 23498759 | 23498840 | 23498759 | ID=Msa0844860-mRNA-1:exon:9621;Parent=Msa0844860-mRNA-1 |
| chr5_4 | exon | 23498948 | 23499028 | 23498948 | ID=Msa0844860-mRNA-1:exon:9620;Parent=Msa0844860-mRNA-1 |
| chr5_4 | exon | 23500114 | 23500175 | 23500114 | ID=Msa0844860-mRNA-1:exon:9619;Parent=Msa0844860-mRNA-1 |
| chr5_4 | exon | 23500265 | 23500347 | 23500265 | ID=Msa0844860-mRNA-1:exon:9618;Parent=Msa0844860-mRNA-1 |
| chr5_4 | exon | 23500379 | 23500462 | 23500379 | ID=Msa0844860-mRNA-1:exon:9617;Parent=Msa0844860-mRNA-1 |
| chr5_4 | five_prime_UTR | 23500379 | 23500462 | 23500379 | ID=Msa0844860-mRNA-1:five_prime_utr;Parent=Msa0844860-mRNA-1 |
| chr5_4 | five_prime_UTR | 23500326 | 23500347 | 23500326 | ID=Msa0844860-mRNA-1:five_prime_utr;Parent=Msa0844860-mRNA-1 |
| chr5_4 | CDS | 23500265 | 23500325 | 23500265 | ID=Msa0844860-mRNA-1:cds;Parent=Msa0844860-mRNA-1 |
| chr5_4 | CDS | 23500114 | 23500175 | 23500114 | ID=Msa0844860-mRNA-1:cds;Parent=Msa0844860-mRNA-1 |
| chr5_4 | CDS | 23498948 | 23499028 | 23498948 | ID=Msa0844860-mRNA-1:cds;Parent=Msa0844860-mRNA-1 |
| chr5_4 | CDS | 23498759 | 23498840 | 23498759 | ID=Msa0844860-mRNA-1:cds;Parent=Msa0844860-mRNA-1 |
| chr5_4 | CDS | 23498595 | 23498665 | 23498595 | ID=Msa0844860-mRNA-1:cds;Parent=Msa0844860-mRNA-1 |
| chr5_4 | CDS | 23498269 | 23498370 | 23498269 | ID=Msa0844860-mRNA-1:cds;Parent=Msa0844860-mRNA-1 |
| chr5_4 | CDS | 23496091 | 23496180 | 23496091 | ID=Msa0844860-mRNA-1:cds;Parent=Msa0844860-mRNA-1 |
| chr5_4 | CDS | 23495406 | 23495480 | 23495406 | ID=Msa0844860-mRNA-1:cds;Parent=Msa0844860-mRNA-1 |
| chr5_4 | CDS | 23494853 | 23494885 | 23494853 | ID=Msa0844860-mRNA-1:cds;Parent=Msa0844860-mRNA-1 |
| chr5_4 | CDS | 23494609 | 23494686 | 23494609 | ID=Msa0844860-mRNA-1:cds;Parent=Msa0844860-mRNA-1 |
| chr5_4 | CDS | 23493979 | 23494050 | 23493979 | ID=Msa0844860-mRNA-1:cds;Parent=Msa0844860-mRNA-1 |
| chr5_4 | CDS | 23493689 | 23493798 | 23493689 | ID=Msa0844860-mRNA-1:cds;Parent=Msa0844860-mRNA-1 |
| chr5_4 | CDS | 23492849 | 23492870 | 23492849 | ID=Msa0844860-mRNA-1:cds;Parent=Msa0844860-mRNA-1 |
| chr5_4 | three_prime_UTR | 23492476 | 23492848 | 23492476 | ID=Msa0844860-mRNA-1:three_prime_utr;Parent=Msa0844860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
