Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0844960 | XP_003613600.1 | 98.077 | 312 | 6 | 0 | 1 | 312 | 1 | 312 | 0.0 | 629 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0844960 | G7K9T7 | 98.077 | 312 | 6 | 0 | 1 | 312 | 1 | 312 | 0.0 | 629 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0121620 | Msa0844960 | 0.803477 | 3.421932e-49 | -8.615850e-47 |
| Msa0479820 | Msa0844960 | 0.813381 | 2.634174e-51 | -8.615850e-47 |
| Msa0844860 | Msa0844960 | 0.960488 | 1.294427e-118 | -8.615850e-47 |
| Msa0844960 | Msa1016910 | 0.819226 | 1.297787e-52 | -8.615850e-47 |
| Msa0844960 | Msa1058170 | 0.806665 | 7.368447e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0844960 | MtrunA17_Chr5g0416081 | 98.077 | 312 | 6 | 0 | 1 | 312 | 1 | 312 | 0.0 | 629 |
| Msa0844960 | MtrunA17_Chr3g0120881 | 32.759 | 232 | 151 | 3 | 3 | 233 | 1 | 228 | 5.44e-37 | 134 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0844960 | AT1G27000.1 | 44.551 | 312 | 163 | 5 | 3 | 312 | 1 | 304 | 2.59e-86 | 261 |
| Msa0844960 | AT2G02730.3 | 45.977 | 261 | 131 | 3 | 3 | 263 | 1 | 251 | 2.33e-77 | 238 |
| Msa0844960 | AT2G02730.1 | 45.977 | 261 | 131 | 3 | 3 | 263 | 1 | 251 | 2.33e-77 | 238 |
| Msa0844960 | AT2G02730.2 | 45.977 | 261 | 131 | 3 | 3 | 263 | 1 | 251 | 2.33e-77 | 238 |
| Msa0844960 | AT1G04960.1 | 38.528 | 231 | 132 | 3 | 3 | 230 | 1 | 224 | 1.46e-48 | 165 |
| Msa0844960 | AT1G04960.2 | 38.532 | 218 | 124 | 3 | 16 | 230 | 31 | 241 | 7.13e-45 | 155 |
| Msa0844960 | AT1G24265.2 | 24.887 | 221 | 155 | 5 | 11 | 226 | 5 | 219 | 2.44e-17 | 81.6 |
| Msa0844960 | AT1G24265.1 | 24.887 | 221 | 155 | 5 | 11 | 226 | 5 | 219 | 2.44e-17 | 81.6 |
| Msa0844960 | AT1G24265.3 | 25.701 | 214 | 148 | 5 | 18 | 226 | 47 | 254 | 4.70e-17 | 81.3 |
| Msa0844960 | AT1G24267.1 | 26.383 | 235 | 162 | 4 | 9 | 238 | 3 | 231 | 8.05e-12 | 65.5 |
| Msa0844960 | AT1G24267.2 | 27.119 | 236 | 160 | 5 | 9 | 238 | 3 | 232 | 6.92e-11 | 62.8 |
Find 103 sgRNAs with CRISPR-Local
Find 495 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAGAAAGTAGTCACTATTT+TGG | 0.169488 | 5_4:+23589828 | None:intergenic |
| ATGGGATTGGACTATATTAT+TGG | 0.190078 | 5_4:-23591972 | Msa0844960:CDS |
| GACCCAGAGAATTCAAATTT+TGG | 0.210369 | 5_4:-23593463 | Msa0844960:CDS |
| CATCCAAAATTTGAATTCTC+TGG | 0.218747 | 5_4:+23593460 | None:intergenic |
| TATATTCAAGTTAGTGATTT+GGG | 0.278066 | 5_4:-23589972 | Msa0844960:three_prime_UTR |
| GAATTCAGTGCTTGAGAATC+AGG | 0.292398 | 5_4:-23592172 | Msa0844960:intron |
| TGATTTGATCGGTGATCTTC+AGG | 0.298477 | 5_4:-23597434 | Msa0844960:intron |
| CTATATTCAAGTTAGTGATT+TGG | 0.307343 | 5_4:-23589973 | Msa0844960:three_prime_UTR |
| GTAGACCTCCCTGGAAGTTT+TGG | 0.311620 | 5_4:+23591327 | None:intergenic |
| TTGCGTAGCTATATGCTTGC+AGG | 0.320870 | 5_4:+23597713 | None:intergenic |
| GCTCACATATCCAGGATTTC+AGG | 0.324581 | 5_4:-23591298 | Msa0844960:intron |
| TACTATTGTGCCGGGTGGTT+TGG | 0.326973 | 5_4:-23591043 | Msa0844960:CDS |
| ACCTTGGGTGCCGTGGGTTA+TGG | 0.332638 | 5_4:-23595933 | Msa0844960:CDS |
| TAAGATGGCACAGTCAATTA+AGG | 0.334952 | 5_4:-23593418 | Msa0844960:CDS |
| CTATATTATTGGCTTTATTA+CGG | 0.335288 | 5_4:-23591961 | Msa0844960:CDS |
| GTTGCAGGAAGTTGCAAATA+TGG | 0.336219 | 5_4:-23591991 | Msa0844960:intron |
| GAGAGTGCCGGACTCTTTGC+AGG | 0.347790 | 5_4:-23591928 | Msa0844960:intron |
| CGCCGATGCCATTGCTGCTC+AGG | 0.350306 | 5_4:-23596269 | Msa0844960:intron |
| TTTGCCTTAGATTCGGCGTT+TGG | 0.357235 | 5_4:-23596150 | Msa0844960:intron |
| CTGCCACGATGACCTCGTTT+TGG | 0.358765 | 5_4:+23597761 | None:intergenic |
| GTGGTTCCAGCTGCCACCTT+GGG | 0.360760 | 5_4:-23595948 | Msa0844960:CDS |
| GTCCTCTTCATCGCCGTAAC+TGG | 0.369272 | 5_4:-23597585 | Msa0844960:intron |
| GTTGGAAAAGTCCGGGGATC+AGG | 0.371091 | 5_4:-23596314 | Msa0844960:CDS |
| TGAAGCTGACCTATCTAAAC+TGG | 0.377732 | 5_4:+23591068 | None:intergenic |
| CTGTCAAAAGGAATTTAGTT+TGG | 0.383268 | 5_4:-23589924 | Msa0844960:three_prime_UTR |
| CAAAAGCAATTGGCATAAAC+AGG | 0.388317 | 5_4:+23589893 | None:intergenic |
| AGCTGCCACCTTGGGTGCCG+TGG | 0.393347 | 5_4:-23595940 | Msa0844960:CDS |
| GACAAACCATAGTAATGAAT+GGG | 0.396947 | 5_4:-23596097 | Msa0844960:CDS |
| ATGGCTTATCATAGTGGAAT+CGG | 0.413245 | 5_4:-23597618 | Msa0844960:CDS |
| AAGGAACAACCAAAACTTCC+AGG | 0.426194 | 5_4:-23591336 | Msa0844960:CDS |
| TAGAAGAACACCTGAAATCC+TGG | 0.436728 | 5_4:+23591288 | None:intergenic |
| AGCTTCAGATACTATTGTGC+CGG | 0.449268 | 5_4:-23591052 | Msa0844960:CDS |
| GTGAAAGGGTTGGAAAAGTC+CGG | 0.450195 | 5_4:-23596322 | Msa0844960:CDS |
| CTACTTCGACCAAGTGTTGA+TGG | 0.450224 | 5_4:-23590166 | Msa0844960:exon |
| CAAAGAGTCCGGCACTCTCC+GGG | 0.451043 | 5_4:+23591932 | None:intergenic |
| ATCCAAAATTTGAATTCTCT+GGG | 0.454696 | 5_4:+23593461 | None:intergenic |
| AAGAAAATTGAGCTGTCAAA+AGG | 0.454760 | 5_4:-23589936 | Msa0844960:three_prime_UTR |
| TTGCAGGAAGTTGCAAATAT+GGG | 0.456775 | 5_4:-23591990 | Msa0844960:intron |
| TGTGGTTCCAGCTGCCACCT+TGG | 0.458676 | 5_4:-23595949 | Msa0844960:CDS |
| ATGCCACATTCAAAAGCAAT+TGG | 0.463829 | 5_4:+23589883 | None:intergenic |
| ACGGCACCCAAGGTGGCAGC+TGG | 0.465085 | 5_4:+23595942 | None:intergenic |
| AGTCATTGTCCAGTTTAGAT+AGG | 0.471397 | 5_4:-23591077 | Msa0844960:CDS |
| AGACAAACCATAGTAATGAA+TGG | 0.473819 | 5_4:-23596098 | Msa0844960:CDS |
| TCTCTCTAACGCCATGGCTA+TGG | 0.474338 | 5_4:-23597637 | Msa0844960:exon |
| AGGTAATTTGTCATCTCTTG+TGG | 0.475135 | 5_4:-23595967 | Msa0844960:CDS |
| ACTAGTATGCTCACATATCC+AGG | 0.485153 | 5_4:-23591306 | Msa0844960:CDS |
| TAGCTATATGCTTGCAGGGA+AGG | 0.502410 | 5_4:+23597718 | None:intergenic |
| TGCTCATAGGCACTAGTGAA+AGG | 0.502471 | 5_4:-23596337 | Msa0844960:intron |
| CACAACAGAAAGTCATTAGC+AGG | 0.508141 | 5_4:+23590051 | None:intergenic |
| GCTTTATTACGGCAAATGCC+CGG | 0.508354 | 5_4:-23591950 | Msa0844960:CDS |
| AGGTATATTATGATTTATGC+AGG | 0.509670 | 5_4:+23590071 | None:intergenic |
| GCTCATAGGCACTAGTGAAA+GGG | 0.511781 | 5_4:-23596336 | Msa0844960:intron |
| GGAAGTTGCAAATATGGGAT+TGG | 0.520895 | 5_4:-23591985 | Msa0844960:CDS |
| GGCAAATGCCCGGAGAGTGC+CGG | 0.523005 | 5_4:-23591940 | Msa0844960:CDS |
| TGAAAGGGTTGGAAAAGTCC+GGG | 0.525822 | 5_4:-23596321 | Msa0844960:CDS |
| TTCACCTTCAGCCTGATCCC+CGG | 0.530274 | 5_4:+23596303 | None:intergenic |
| AGCAGCGAAGGCCGTTGTTG+AGG | 0.531539 | 5_4:-23591008 | Msa0844960:intron |
| GCTGCCACCTTGGGTGCCGT+GGG | 0.532377 | 5_4:-23595939 | Msa0844960:CDS |
| GAAGAAGGAAGTACCAGTTA+CGG | 0.533263 | 5_4:+23597572 | None:intergenic |
| ATACCCACCTGCAAAGAGTC+CGG | 0.533950 | 5_4:+23591921 | None:intergenic |
| TGGCTTATCATAGTGGAATC+GGG | 0.534196 | 5_4:-23597617 | Msa0844960:CDS |
| GTTTGTTACCTGAGCAGCAA+TGG | 0.542711 | 5_4:+23596261 | None:intergenic |
| CTGAGCAGCAATGGCATCGG+CGG | 0.543224 | 5_4:+23596270 | None:intergenic |
| AATGCGCAAACAATATAAGA+TGG | 0.548314 | 5_4:-23593433 | Msa0844960:CDS |
| TATATGCTTGCAGGGAAGGA+AGG | 0.548869 | 5_4:+23597722 | None:intergenic |
| TTATGGTTACATGTGGTTGA+AGG | 0.557263 | 5_4:-23595916 | Msa0844960:intron |
| ATGGCTATGGCTTATCATAG+TGG | 0.557647 | 5_4:-23597624 | Msa0844960:CDS |
| GCTTCAGATACTATTGTGCC+GGG | 0.558234 | 5_4:-23591051 | Msa0844960:CDS |
| GGCAAATTATCTGATTTGAT+CGG | 0.562791 | 5_4:-23597445 | Msa0844960:CDS |
| ACCATAACCCACGGCACCCA+AGG | 0.564207 | 5_4:+23595932 | None:intergenic |
| GGGGATCAGGCTGAAGGTGA+AGG | 0.565982 | 5_4:-23596301 | Msa0844960:CDS |
| TACCAGTTACGGCGATGAAG+AGG | 0.572999 | 5_4:+23597583 | None:intergenic |
| GAGACCTTGCCATCAACACT+TGG | 0.578373 | 5_4:+23590157 | None:intergenic |
| TGCGTAGCTATATGCTTGCA+GGG | 0.578590 | 5_4:+23597714 | None:intergenic |
| ATAGGCACTAGTGAAAGGGT+TGG | 0.586495 | 5_4:-23596332 | Msa0844960:intron |
| AAGTCCGGGGATCAGGCTGA+AGG | 0.588920 | 5_4:-23596307 | Msa0844960:CDS |
| GCAACACACAGTGGCAATGT+TGG | 0.591450 | 5_4:-23592725 | Msa0844960:intron |
| AGCATACTAGTAGACCTCCC+TGG | 0.594208 | 5_4:+23591318 | None:intergenic |
| GATTTCAGCGACCTGTGTGA+AGG | 0.594289 | 5_4:+23597688 | None:intergenic |
| TACCTGAGCAGCAATGGCAT+CGG | 0.596170 | 5_4:+23596267 | None:intergenic |
| ATATACCCTCTCAGGATGGA+AGG | 0.598299 | 5_4:-23592197 | Msa0844960:intron |
| TCGACCAAGTGTTGATGGCA+AGG | 0.603236 | 5_4:-23590161 | Msa0844960:exon |
| TACGGCGATGAAGAGGACCT+TGG | 0.605358 | 5_4:+23597590 | None:intergenic |
| AGGAACAACCAAAACTTCCA+GGG | 0.613013 | 5_4:-23591335 | Msa0844960:CDS |
| ATAATCTAGAGAAGCAGCGA+AGG | 0.617542 | 5_4:-23591020 | Msa0844960:CDS |
| GTACGTGACTAAACGCAACA+TGG | 0.628631 | 5_4:-23595647 | Msa0844960:CDS |
| TAGTGGAATCGGGATCTCCA+AGG | 0.639289 | 5_4:-23597607 | Msa0844960:CDS |
| CCGTGGGTTATGGTTACATG+TGG | 0.642503 | 5_4:-23595923 | Msa0844960:CDS |
| ACAAACCATAGTAATGAATG+GGG | 0.647379 | 5_4:-23596096 | Msa0844960:CDS |
| ATAACCCACGGCACCCAAGG+TGG | 0.654419 | 5_4:+23595935 | None:intergenic |
| TCAGATACTATTGTGCCGGG+TGG | 0.669543 | 5_4:-23591048 | Msa0844960:CDS |
| CCACATGTAACCATAACCCA+CGG | 0.673802 | 5_4:+23595923 | None:intergenic |
| GCTAAATCAAACCTCAACAA+CGG | 0.699768 | 5_4:+23590997 | None:intergenic |
| TCTAGATTATCCAAACCACC+CGG | 0.701858 | 5_4:+23591033 | None:intergenic |
| GAAAGGGTTGGAAAAGTCCG+GGG | 0.701993 | 5_4:-23596320 | Msa0844960:CDS |
| ACTATGATAAGCCATAGCCA+TGG | 0.702387 | 5_4:+23597626 | None:intergenic |
| ACTTACAGCAATGACATCCG+AGG | 0.707335 | 5_4:+23595585 | None:intergenic |
| GCTACGCAAAGCCTTCACAC+AGG | 0.708761 | 5_4:-23597699 | Msa0844960:intron |
| GAGCGTCGTGCAACACACAG+TGG | 0.711634 | 5_4:-23592734 | Msa0844960:CDS |
| TAGCCAAAACGAGGTCATCG+TGG | 0.717811 | 5_4:-23597764 | Msa0844960:five_prime_UTR |
| AAAGAAGTTTAGCCAAAACG+AGG | 0.727110 | 5_4:-23597773 | None:intergenic |
| CAAACCATAGTAATGAATGG+GGG | 0.730627 | 5_4:-23596095 | Msa0844960:CDS |
| AACAACCAAAACTTCCAGGG+AGG | 0.731667 | 5_4:-23591332 | Msa0844960:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTCAGATTTTTTTTTTTTTT+TGG | - | chr5_4:23590336-23590355 | Msa0844960:intron | 10.0% |
| !!! | TCAGATTTTTTTTTTTTTTT+GGG | - | chr5_4:23590337-23590356 | Msa0844960:intron | 10.0% |
| !!! | ATTATTTTAGAAATATCAAA+TGG | + | chr5_4:23591822-23591841 | None:intergenic | 10.0% |
| !!! | TATTTGTTTATTTTTATTAG+TGG | - | chr5_4:23595656-23595675 | Msa0844960:CDS | 10.0% |
| !!! | AACTTTTTTTGAAATAAAAA+AGG | + | chr5_4:23595837-23595856 | None:intergenic | 10.0% |
| !!! | TCTATATAAAAATTTTATAC+TGG | + | chr5_4:23597026-23597045 | None:intergenic | 10.0% |
| !!! | CAGATTTTTTTTTTTTTTTG+GGG | - | chr5_4:23590338-23590357 | Msa0844960:intron | 15.0% |
| !!! | TTATATATTTTTTTGCTCAT+AGG | - | chr5_4:23591207-23591226 | Msa0844960:intron | 15.0% |
| !!! | ACTATTATAGTTTGTATTAT+AGG | - | chr5_4:23592244-23592263 | Msa0844960:intron | 15.0% |
| !!! | TTATAGTTTTATTTTTCTCT+TGG | + | chr5_4:23592470-23592489 | None:intergenic | 15.0% |
| !!! | TAAACCTTAGTTAATTTTTT+TGG | + | chr5_4:23592522-23592541 | None:intergenic | 15.0% |
| !! | AACTTTAATAAAAAATGAGT+AGG | - | chr5_4:23592919-23592938 | Msa0844960:intron | 15.0% |
| !! | TAATGTAATTGATATAGTAA+TGG | - | chr5_4:23592962-23592981 | Msa0844960:intron | 15.0% |
| !! | AATGTAATTGATATAGTAAT+GGG | - | chr5_4:23592963-23592982 | Msa0844960:intron | 15.0% |
| !!! | TTTTAAAATCATTCTGTAAT+TGG | + | chr5_4:23593227-23593246 | None:intergenic | 15.0% |
| !! | CCTTAAATTTATTCTTAAAA+CGG | - | chr5_4:23593775-23593794 | Msa0844960:intron | 15.0% |
| !! | CTTAAATTTATTCTTAAAAC+GGG | - | chr5_4:23593776-23593795 | Msa0844960:intron | 15.0% |
| !! | TTTATTAATATTGGAATGTT+GGG | - | chr5_4:23594545-23594564 | Msa0844960:intron | 15.0% |
| !!! | TTTACAAAATTTTGAAAACA+TGG | + | chr5_4:23595968-23595987 | None:intergenic | 15.0% |
| !! | TGATAATAATTAGTGTTATG+TGG | - | chr5_4:23590297-23590316 | Msa0844960:intron | 20.0% |
| !!! | ATTTTTTTTTTTTTTTGGGG+CGG | - | chr5_4:23590341-23590360 | Msa0844960:intron | 20.0% |
| !! | TTCATCTAATTATTGATACT+TGG | - | chr5_4:23590449-23590468 | Msa0844960:intron | 20.0% |
| !! | TCATCTAATTATTGATACTT+GGG | - | chr5_4:23590450-23590469 | Msa0844960:intron | 20.0% |
| !!! | AAAAACAAGTTATTTTTCTC+TGG | + | chr5_4:23590523-23590542 | None:intergenic | 20.0% |
| !!! | AGAAAAATAACTTGTTTTTG+CGG | - | chr5_4:23590524-23590543 | Msa0844960:intron | 20.0% |
| !! | ACATTTAAAAAATCAATGAG+AGG | + | chr5_4:23591555-23591574 | None:intergenic | 20.0% |
| !! | AAATCACTCATAAACATAAA+CGG | + | chr5_4:23591797-23591816 | None:intergenic | 20.0% |
| !! | ATAGTAACTTTATCAATAGA+AGG | + | chr5_4:23592229-23592248 | None:intergenic | 20.0% |
| !! | TCAACCAAAAAAATTAACTA+AGG | - | chr5_4:23592515-23592534 | Msa0844960:intron | 20.0% |
| !! | AGGTTTATGAGAATAAAAAT+AGG | - | chr5_4:23592535-23592554 | Msa0844960:intron | 20.0% |
| !!! | TACCAATTTTAGTTGTTTTT+AGG | + | chr5_4:23592577-23592596 | None:intergenic | 20.0% |
| !!! | ATGATTTTAAAAAACCATCA+AGG | - | chr5_4:23593235-23593254 | Msa0844960:intron | 20.0% |
| !!! | TTTACTGTTCAAAAGTATAT+AGG | - | chr5_4:23593302-23593321 | Msa0844960:intron | 20.0% |
| !!! | CCGTTTTAAGAATAAATTTA+AGG | + | chr5_4:23593778-23593797 | None:intergenic | 20.0% |
| !! | TCAATTCAAAGATTTAACAT+GGG | - | chr5_4:23593976-23593995 | Msa0844960:intron | 20.0% |
| !! | AGAAGCAATTAAAATTTAGA+AGG | + | chr5_4:23594039-23594058 | None:intergenic | 20.0% |
| !! | TCAAAATCAATAACTTCTAA+AGG | + | chr5_4:23594376-23594395 | None:intergenic | 20.0% |
| !! | TGTTGCATCTTTATTAATAT+TGG | - | chr5_4:23594536-23594555 | Msa0844960:intron | 20.0% |
| !! | CTTTATTAATATTGGAATGT+TGG | - | chr5_4:23594544-23594563 | Msa0844960:intron | 20.0% |
| !! | TAACTAACTCGTAAAATTAT+AGG | + | chr5_4:23594593-23594612 | None:intergenic | 20.0% |
| !!! | TATAATTTTACGAGTTAGTT+AGG | - | chr5_4:23594592-23594611 | Msa0844960:intron | 20.0% |
| !!! | CAAATGATAGTTTTGTTTTT+TGG | + | chr5_4:23595012-23595031 | None:intergenic | 20.0% |
| !! | TAAATCTGAATTATGATCTA+TGG | - | chr5_4:23595147-23595166 | Msa0844960:intron | 20.0% |
| !! | AAGAATGATTCAAATAAAAG+TGG | + | chr5_4:23595333-23595352 | None:intergenic | 20.0% |
| !! | AACTACTTTGCAAATTTAAA+GGG | + | chr5_4:23595427-23595446 | None:intergenic | 20.0% |
| !! | AAACTACTTTGCAAATTTAA+AGG | + | chr5_4:23595428-23595447 | None:intergenic | 20.0% |
| !! | GTTAAATCAGTATTATTGTT+GGG | + | chr5_4:23595540-23595559 | None:intergenic | 20.0% |
| !! | AGTTAAATCAGTATTATTGT+TGG | + | chr5_4:23595541-23595560 | None:intergenic | 20.0% |
| !!! | CTATATTATTGGCTTTATTA+CGG | - | chr5_4:23595596-23595615 | Msa0844960:CDS | 20.0% |
| !!! | ATGTTATATCTTGTATTTTC+AGG | - | chr5_4:23596187-23596206 | Msa0844960:intron | 20.0% |
| !!! | TGTTATATCTTGTATTTTCA+GGG | - | chr5_4:23596188-23596207 | Msa0844960:intron | 20.0% |
| !! | AAAATAGATAACAAAGTACA+AGG | + | chr5_4:23596295-23596314 | None:intergenic | 20.0% |
| !! | GTACATATTATTAAATTGTG+AGG | + | chr5_4:23596728-23596747 | None:intergenic | 20.0% |
| !! | TTTATATAGAAATCTAGTTG+TGG | - | chr5_4:23597036-23597055 | Msa0844960:intron | 20.0% |
| !! | CATATTGAATATACAAATCA+AGG | - | chr5_4:23597095-23597114 | Msa0844960:intron | 20.0% |
| !!! | TAACTATTTTTGTGATAAAC+TGG | + | chr5_4:23597222-23597241 | None:intergenic | 20.0% |
| !!! | TATATTCAAGTTAGTGATTT+GGG | - | chr5_4:23597585-23597604 | Msa0844960:intron | 20.0% |
| ! | AAGAAAAGTAGAGTGAAATT+TGG | + | chr5_4:23590165-23590184 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTTTTTTTGGGGC+GGG | - | chr5_4:23590342-23590361 | Msa0844960:intron | 25.0% |
| ! | TATAAGTTGTTTATCGAAAC+AGG | + | chr5_4:23590624-23590643 | None:intergenic | 25.0% |
| !!! | GTTGTTTTTATACGCTATAT+TGG | - | chr5_4:23590972-23590991 | Msa0844960:intron | 25.0% |
| !!! | TTGCAACATTCCAATTTTTT+GGG | + | chr5_4:23591123-23591142 | None:intergenic | 25.0% |
| ! | GTAATAGTTTCATTACTTTG+TGG | - | chr5_4:23591694-23591713 | Msa0844960:intron | 25.0% |
| ! | AAGTATTTCTTGCTTCATAA+AGG | - | chr5_4:23591740-23591759 | Msa0844960:intron | 25.0% |
| ! | AGTATTTCTTGCTTCATAAA+GGG | - | chr5_4:23591741-23591760 | Msa0844960:intron | 25.0% |
| ! | AGAATATTCAATGCAGTAAA+TGG | + | chr5_4:23592000-23592019 | None:intergenic | 25.0% |
| ! | AATAGAAGGAAAAAAACTCT+AGG | + | chr5_4:23592215-23592234 | None:intergenic | 25.0% |
| ! | TATTATAGGAAGACTTGAAT+TGG | - | chr5_4:23592258-23592277 | Msa0844960:intron | 25.0% |
| ! | ATTATAGGAAGACTTGAATT+GGG | - | chr5_4:23592259-23592278 | Msa0844960:intron | 25.0% |
| ! | GTAAATATACCATGTAATGT+GGG | + | chr5_4:23592649-23592668 | None:intergenic | 25.0% |
| ! | TTCTTATTGGTCAAAAACAA+TGG | + | chr5_4:23593601-23593620 | None:intergenic | 25.0% |
| !!! | TTGTTTTTCTCACTTCTTAT+TGG | + | chr5_4:23593614-23593633 | None:intergenic | 25.0% |
| ! | AATAAGAAGTGAGAAAAACA+AGG | - | chr5_4:23593613-23593632 | Msa0844960:intron | 25.0% |
| !!! | ATTTGTTGTCCTTAATATGA+GGG | - | chr5_4:23593879-23593898 | Msa0844960:intron | 25.0% |
| ! | CTCAATTCAAAGATTTAACA+TGG | - | chr5_4:23593975-23593994 | Msa0844960:intron | 25.0% |
| ! | ATCCAAAATTTGAATTCTCT+GGG | + | chr5_4:23594099-23594118 | None:intergenic | 25.0% |
| ! | GTCTTGATGAATATCTATAT+TGG | - | chr5_4:23594404-23594423 | Msa0844960:intron | 25.0% |
| ! | TAAGTAAGATAAACTCTCTT+TGG | - | chr5_4:23594443-23594462 | Msa0844960:intron | 25.0% |
| ! | ATGTTTGAATTCATGATGTT+TGG | - | chr5_4:23594856-23594875 | Msa0844960:intron | 25.0% |
| !! | TAGTTTAGAGTTATGAAGAA+GGG | - | chr5_4:23594907-23594926 | Msa0844960:intron | 25.0% |
| !!! | TTTTGTTTTTTGGTGTAAAC+CGG | + | chr5_4:23595002-23595021 | None:intergenic | 25.0% |
| !!! | ATAATACTGATTTAACTGTG+TGG | - | chr5_4:23595544-23595563 | Msa0844960:intron | 25.0% |
| ! | GGTACAAAGTAAAAACAAAA+TGG | + | chr5_4:23595947-23595966 | None:intergenic | 25.0% |
| ! | TTTGAAAACAATACTGTTTC+AGG | - | chr5_4:23596001-23596020 | Msa0844960:intron | 25.0% |
| ! | TTAATAATTAAGCCACTAGA+TGG | + | chr5_4:23596168-23596187 | None:intergenic | 25.0% |
| !! | TAGTCTGTCATTTGATAATA+CGG | - | chr5_4:23596337-23596356 | Msa0844960:intron | 25.0% |
| !!! | ACTAAACAACTTTTAGAAGT+GGG | + | chr5_4:23596757-23596776 | None:intergenic | 25.0% |
| !!! | AACTAAACAACTTTTAGAAG+TGG | + | chr5_4:23596758-23596777 | None:intergenic | 25.0% |
| ! | TGAAAACATAATGAAGCTTA+AGG | - | chr5_4:23596795-23596814 | Msa0844960:intron | 25.0% |
| ! | TGTAAATAAAACTACCTAAC+TGG | + | chr5_4:23596856-23596875 | None:intergenic | 25.0% |
| !!! | AGGTAGTTTTATTTACACAT+AGG | - | chr5_4:23596859-23596878 | Msa0844960:intron | 25.0% |
| ! | CAACTTCAAACAAACATTTA+GGG | - | chr5_4:23596895-23596914 | Msa0844960:intron | 25.0% |
| !!! | TATTTTTGTGATAAACTGGA+CGG | + | chr5_4:23597218-23597237 | None:intergenic | 25.0% |
| !! | AGCAATAGATATTCTCTTTT+TGG | + | chr5_4:23597302-23597321 | None:intergenic | 25.0% |
| ! | TTCCTTATACAAAGCAATAA+AGG | - | chr5_4:23597324-23597343 | Msa0844960:intron | 25.0% |
| ! | TACCTTTATTGCTTTGTATA+AGG | + | chr5_4:23597329-23597348 | None:intergenic | 25.0% |
| ! | AGGTATATTATGATTTATGC+AGG | + | chr5_4:23597489-23597508 | None:intergenic | 25.0% |
| !! | CTATATTCAAGTTAGTGATT+TGG | - | chr5_4:23597584-23597603 | Msa0844960:intron | 25.0% |
| !!! | ATAATTTGCCGTTTTTGAAG+AGG | + | chr5_4:23590102-23590121 | None:intergenic | 30.0% |
| ! | GGCAAATTATCTGATTTGAT+CGG | - | chr5_4:23590112-23590131 | Msa0844960:three_prime_UTR | 30.0% |
| ! | GCTTCATTTGTTAAATTCCA+CGG | - | chr5_4:23590186-23590205 | Msa0844960:intron | 30.0% |
| TATAAAAAACAATGAAGCCG+TGG | + | chr5_4:23590206-23590225 | None:intergenic | 30.0% | |
| ! | TTATGTGGTAGTGATCATTA+GGG | - | chr5_4:23590312-23590331 | Msa0844960:intron | 30.0% |
| !!! | TTTTTTTTTTTTTTGGGGCG+GGG | - | chr5_4:23590343-23590362 | Msa0844960:intron | 30.0% |
| GAAAATCACTCCAAATTTGT+GGG | + | chr5_4:23590495-23590514 | None:intergenic | 30.0% | |
| AGAAAATCACTCCAAATTTG+TGG | + | chr5_4:23590496-23590515 | None:intergenic | 30.0% | |
| TCTCCCAACTAGATAAATAT+AGG | - | chr5_4:23590825-23590844 | Msa0844960:intron | 30.0% | |
| AATAAGTTGTTTGTCCAAAC+CGG | + | chr5_4:23590851-23590870 | None:intergenic | 30.0% | |
| ! | TTTGAAGCTTATAACACAAG+TGG | - | chr5_4:23590869-23590888 | Msa0844960:intron | 30.0% |
| !! | ATAAGTTTTGTGAGACTGTT+TGG | + | chr5_4:23591063-23591082 | None:intergenic | 30.0% |
| !! | TGTTTGTATTGGCTTATTTG+AGG | + | chr5_4:23591098-23591117 | None:intergenic | 30.0% |
| TCAAATAAGCCAATACAAAC+AGG | - | chr5_4:23591097-23591116 | Msa0844960:CDS | 30.0% | |
| !!! | GTTGCAACATTCCAATTTTT+TGG | + | chr5_4:23591124-23591143 | None:intergenic | 30.0% |
| !! | ACTTTTAGTCTTTTGATGCT+AGG | - | chr5_4:23591142-23591161 | Msa0844960:intron | 30.0% |
| ! | TTTGATGCTAGGATTTGTTT+CGG | - | chr5_4:23591153-23591172 | Msa0844960:intron | 30.0% |
| AGACAAACCATAGTAATGAA+TGG | - | chr5_4:23591459-23591478 | Msa0844960:intron | 30.0% | |
| GACAAACCATAGTAATGAAT+GGG | - | chr5_4:23591460-23591479 | Msa0844960:intron | 30.0% | |
| ACAAACCATAGTAATGAATG+GGG | - | chr5_4:23591461-23591480 | Msa0844960:intron | 30.0% | |
| ! | TTCTATTTTGTCATCTAGTG+TGG | - | chr5_4:23591504-23591523 | Msa0844960:intron | 30.0% |
| ! | AATGTTTTTCCCTTTTCTGT+AGG | - | chr5_4:23591570-23591589 | Msa0844960:intron | 30.0% |
| GACAAATTACCTACAGAAAA+GGG | + | chr5_4:23591582-23591601 | None:intergenic | 30.0% | |
| TGACAAATTACCTACAGAAA+AGG | + | chr5_4:23591583-23591602 | None:intergenic | 30.0% | |
| ATATCAAACGTTATGTCAAG+AGG | + | chr5_4:23592126-23592145 | None:intergenic | 30.0% | |
| ATCATCTGTCTTGTGAAAAA+AGG | + | chr5_4:23592189-23592208 | None:intergenic | 30.0% | |
| TTGAAGCATACTATACTGTA+GGG | - | chr5_4:23592282-23592301 | Msa0844960:intron | 30.0% | |
| AAATAGGTCATAAACCTCAT+TGG | - | chr5_4:23592551-23592570 | Msa0844960:intron | 30.0% | |
| GGCCTAAAAACAACTAAAAT+TGG | - | chr5_4:23592572-23592591 | Msa0844960:intron | 30.0% | |
| CGTAAATATACCATGTAATG+TGG | + | chr5_4:23592650-23592669 | None:intergenic | 30.0% | |
| CAGAAACTTTGTGATTGATA+AGG | + | chr5_4:23592711-23592730 | None:intergenic | 30.0% | |
| AATCACAAAGTTTCTGATGT+GGG | - | chr5_4:23592715-23592734 | Msa0844960:intron | 30.0% | |
| ACACATTTGAAAAAGTTGAC+AGG | + | chr5_4:23592831-23592850 | None:intergenic | 30.0% | |
| TCAAATGTGTCAATTACCAT+CGG | - | chr5_4:23592841-23592860 | Msa0844960:intron | 30.0% | |
| AAATTAAATCCAAAAGCCGA+TGG | + | chr5_4:23592860-23592879 | None:intergenic | 30.0% | |
| GGTGTATATATTTATCGAGT+TGG | - | chr5_4:23592984-23593003 | Msa0844960:intron | 30.0% | |
| ! | TATGTATAGCTCGATTTGTT+TGG | + | chr5_4:23593018-23593037 | None:intergenic | 30.0% |
| ! | AAATAGTTTGAGACTTGGTT+CGG | + | chr5_4:23593131-23593150 | None:intergenic | 30.0% |
| AATATAATGCGCTTCTATAC+TGG | - | chr5_4:23593200-23593219 | Msa0844960:intron | 30.0% | |
| TATATGTCTTGGAATAGTTG+AGG | + | chr5_4:23593394-23593413 | None:intergenic | 30.0% | |
| AACTATTCCAAGACATATAG+AGG | - | chr5_4:23593395-23593414 | Msa0844960:intron | 30.0% | |
| TTTCCAGTGTTAAAAGAGAT+AGG | + | chr5_4:23593421-23593440 | None:intergenic | 30.0% | |
| ATAGAAATCTTACATACCCT+AGG | - | chr5_4:23593453-23593472 | Msa0844960:CDS | 30.0% | |
| TAGAAATCTTACATACCCTA+GGG | - | chr5_4:23593454-23593473 | Msa0844960:CDS | 30.0% | |
| TTAATTATCCAAAGTCCCTA+GGG | + | chr5_4:23593472-23593491 | None:intergenic | 30.0% | |
| AAAACAATGGAGAGAGAAAA+AGG | + | chr5_4:23593588-23593607 | None:intergenic | 30.0% | |
| TCAACAAAGTTGTCATCAAA+TGG | - | chr5_4:23593639-23593658 | Msa0844960:intron | 30.0% | |
| ! | TTGCTGTCACAATATTTTTC+CGG | - | chr5_4:23593699-23593718 | Msa0844960:intron | 30.0% |
| TGTTAAAAACTGTTGCAGTT+TGG | + | chr5_4:23593746-23593765 | None:intergenic | 30.0% | |
| CTCATATTAAGGACAACAAA+TGG | + | chr5_4:23593880-23593899 | None:intergenic | 30.0% | |
| !! | CATTTGTTGTCCTTAATATG+AGG | - | chr5_4:23593878-23593897 | Msa0844960:intron | 30.0% |
| AATATCTCCAGAAAAACAGT+GGG | + | chr5_4:23593938-23593957 | None:intergenic | 30.0% | |
| AAATATCTCCAGAAAAACAG+TGG | + | chr5_4:23593939-23593958 | None:intergenic | 30.0% | |
| TGAATTGAGTGCATAATGAT+GGG | + | chr5_4:23593964-23593983 | None:intergenic | 30.0% | |
| TTGAATTGAGTGCATAATGA+TGG | + | chr5_4:23593965-23593984 | None:intergenic | 30.0% | |
| ! | TTGCTTCTCAATGTTTTTCA+TGG | - | chr5_4:23594051-23594070 | Msa0844960:intron | 30.0% |
| CATCCAAAATTTGAATTCTC+TGG | + | chr5_4:23594100-23594119 | None:intergenic | 30.0% | |
| AATGCGCAAACAATATAAGA+TGG | - | chr5_4:23594124-23594143 | Msa0844960:intron | 30.0% | |
| GGTCACATGTATCTTTATAT+AGG | + | chr5_4:23594212-23594231 | None:intergenic | 30.0% | |
| TGTGTATCCAAAAATCTGTT+TGG | + | chr5_4:23594233-23594252 | None:intergenic | 30.0% | |
| TCTATGTAGACTTACCTATA+AGG | - | chr5_4:23594308-23594327 | Msa0844960:intron | 30.0% | |
| !! | GCTATTTCTTTGCAGATAAA+TGG | - | chr5_4:23594341-23594360 | Msa0844960:intron | 30.0% |
| ! | TCTTTGCAGATAAATGGATT+AGG | - | chr5_4:23594347-23594366 | Msa0844960:intron | 30.0% |
| CAATTTCAATTCCATTATCC+AGG | + | chr5_4:23594663-23594682 | None:intergenic | 30.0% | |
| ACATTGTAATACTCTTGTAC+AGG | - | chr5_4:23594757-23594776 | Msa0844960:intron | 30.0% | |
| TGGCTTATTAATTGTTAACG+TGG | - | chr5_4:23594876-23594895 | Msa0844960:intron | 30.0% | |
| ! | CTAGTTTAGAGTTATGAAGA+AGG | - | chr5_4:23594906-23594925 | Msa0844960:intron | 30.0% |
| !!! | AGTTATGAAGAAGGGTATTT+TGG | - | chr5_4:23594915-23594934 | Msa0844960:intron | 30.0% |
| AGTCTATAGTCCTAATAAGT+AGG | - | chr5_4:23595275-23595294 | Msa0844960:intron | 30.0% | |
| TACTATGCAACCTACTTATT+AGG | + | chr5_4:23595288-23595307 | None:intergenic | 30.0% | |
| ! | ATCAATCCGTTTCTTTTGTT+TGG | - | chr5_4:23595459-23595478 | Msa0844960:intron | 30.0% |
| GATCTTCCAAACAAAAGAAA+CGG | + | chr5_4:23595468-23595487 | None:intergenic | 30.0% | |
| TACATAATCTATTCAATGCC+TGG | - | chr5_4:23595490-23595509 | Msa0844960:intron | 30.0% | |
| ACATAATCTATTCAATGCCT+GGG | - | chr5_4:23595491-23595510 | Msa0844960:intron | 30.0% | |
| ATGGGATTGGACTATATTAT+TGG | - | chr5_4:23595585-23595604 | Msa0844960:intron | 30.0% | |
| CCATACATAACTGAAACATT+CGG | + | chr5_4:23595731-23595750 | None:intergenic | 30.0% | |
| TGTTTCAGTTATGTATGGTT+TGG | - | chr5_4:23595733-23595752 | Msa0844960:intron | 30.0% | |
| GTGTAAACATAAATCGATAG+TGG | - | chr5_4:23596076-23596095 | Msa0844960:intron | 30.0% | |
| !! | AAATGTCAGTTCTAGATACA+AGG | + | chr5_4:23596115-23596134 | None:intergenic | 30.0% |
| ! | AGTCTGTCATTTGATAATAC+GGG | - | chr5_4:23596338-23596357 | Msa0844960:intron | 30.0% |
| TAACATGCTTACATTCTAAG+TGG | - | chr5_4:23596628-23596647 | Msa0844960:intron | 30.0% | |
| ! | CATTATTGTTTTCACCAGTT+AGG | - | chr5_4:23596839-23596858 | Msa0844960:intron | 30.0% |
| ! | CCTAAATGTTTGTTTGAAGT+TGG | + | chr5_4:23596897-23596916 | None:intergenic | 30.0% |
| CCAACTTCAAACAAACATTT+AGG | - | chr5_4:23596894-23596913 | Msa0844960:intron | 30.0% | |
| !! | ACAAACATTTAGGGTCATTT+TGG | - | chr5_4:23596904-23596923 | Msa0844960:intron | 30.0% |
| CTTTCGTATTATTCAACTGA+TGG | - | chr5_4:23596977-23596996 | Msa0844960:intron | 30.0% | |
| ! | TGTGGACTGTTAAAACAAAT+TGG | - | chr5_4:23597054-23597073 | Msa0844960:intron | 30.0% |
| ! | GTGGACTGTTAAAACAAATT+GGG | - | chr5_4:23597055-23597074 | Msa0844960:intron | 30.0% |
| TGGACTGTTAAAACAAATTG+GGG | - | chr5_4:23597056-23597075 | Msa0844960:intron | 30.0% | |
| GCATCATTTATTTATGGCAA+AGG | + | chr5_4:23597156-23597175 | None:intergenic | 30.0% | |
| ATAAATAAATGATGCTGCAG+CGG | - | chr5_4:23597161-23597180 | Msa0844960:intron | 30.0% | |
| ! | ATGATGACTATGTAGCTTTT+AGG | - | chr5_4:23597425-23597444 | Msa0844960:intron | 30.0% |
| AAGAAAATTGAGCTGTCAAA+AGG | - | chr5_4:23597621-23597640 | Msa0844960:CDS | 30.0% | |
| CTGTCAAAAGGAATTTAGTT+TGG | - | chr5_4:23597633-23597652 | Msa0844960:exon | 30.0% | |
| ! | CTAGAAAGTAGTCACTATTT+TGG | + | chr5_4:23597732-23597751 | None:intergenic | 30.0% |
| ! | ATGGCTTATCATAGTGGAAT+CGG | - | chr5_4:23589939-23589958 | Msa0844960:three_prime_UTR | 35.0% |
| ! | GTTATGTGGTAGTGATCATT+AGG | - | chr5_4:23590311-23590330 | Msa0844960:intron | 35.0% |
| !!! | TTTTTTTTTTTTTGGGGCGG+GGG | - | chr5_4:23590344-23590363 | Msa0844960:intron | 35.0% |
| TATTCCTGAGTTCGATTCAT+GGG | + | chr5_4:23590416-23590435 | None:intergenic | 35.0% | |
| ATATTCCTGAGTTCGATTCA+TGG | + | chr5_4:23590417-23590436 | None:intergenic | 35.0% | |
| CCAGTTATAGCAACTAGAAA+GGG | + | chr5_4:23590594-23590613 | None:intergenic | 35.0% | |
| TAGTTGCTATAACTGGCTAT+AGG | - | chr5_4:23590598-23590617 | Msa0844960:intron | 35.0% | |
| ! | CATGTCATAAGCTCTTTTCA+CGG | - | chr5_4:23590800-23590819 | Msa0844960:intron | 35.0% |
| ! | ATGTCATAAGCTCTTTTCAC+GGG | - | chr5_4:23590801-23590820 | Msa0844960:intron | 35.0% |
| CGGCCTATATTTATCTAGTT+GGG | + | chr5_4:23590831-23590850 | None:intergenic | 35.0% | |
| CCAACTAGATAAATATAGGC+CGG | - | chr5_4:23590829-23590848 | Msa0844960:intron | 35.0% | |
| TAGATAAATATAGGCCGGTT+TGG | - | chr5_4:23590834-23590853 | Msa0844960:intron | 35.0% | |
| ATACGCTATATTGGAGAACT+TGG | - | chr5_4:23590981-23591000 | Msa0844960:intron | 35.0% | |
| !!! | TTTTTTGGGCCTGTTTGTAT+TGG | + | chr5_4:23591109-23591128 | None:intergenic | 35.0% |
| TACAAACAGGCCCAAAAAAT+TGG | - | chr5_4:23591110-23591129 | Msa0844960:intron | 35.0% | |
| TTCGAAAATGCACTTGAAAG+AGG | - | chr5_4:23591349-23591368 | Msa0844960:CDS | 35.0% | |
| GTTCAACTTTGCCTTAGATT+CGG | - | chr5_4:23591400-23591419 | Msa0844960:intron | 35.0% | |
| CAAACCATAGTAATGAATGG+GGG | - | chr5_4:23591462-23591481 | Msa0844960:intron | 35.0% | |
| ! | AGGTAATTTGTCATCTCTTG+TGG | - | chr5_4:23591590-23591609 | Msa0844960:intron | 35.0% |
| TTATGGTTACATGTGGTTGA+AGG | - | chr5_4:23591641-23591660 | Msa0844960:intron | 35.0% | |
| TGATATTCCTTCAACTGAGT+TGG | - | chr5_4:23592140-23592159 | Msa0844960:intron | 35.0% | |
| TATTTCACCAACTCAGTTGA+AGG | + | chr5_4:23592150-23592169 | None:intergenic | 35.0% | |
| GTTGAAGCATACTATACTGT+AGG | - | chr5_4:23592281-23592300 | Msa0844960:intron | 35.0% | |
| !!! | TAGTTGTTTTTAGGCCAATG+AGG | + | chr5_4:23592568-23592587 | None:intergenic | 35.0% |
| ACTTCAATTCCCACATTACA+TGG | - | chr5_4:23592637-23592656 | Msa0844960:intron | 35.0% | |
| CAATCACAAAGTTTCTGATG+TGG | - | chr5_4:23592714-23592733 | Msa0844960:intron | 35.0% | |
| AGCTATACATAGCTCAAGTT+CGG | - | chr5_4:23593027-23593046 | Msa0844960:intron | 35.0% | |
| CAACTCAAATTCGACTCATT+TGG | - | chr5_4:23593076-23593095 | Msa0844960:intron | 35.0% | |
| ! | CTCGAAAATAGTTTGAGACT+TGG | + | chr5_4:23593136-23593155 | None:intergenic | 35.0% |
| !!! | GTCTCAAACTATTTTCGAGT+TGG | - | chr5_4:23593137-23593156 | Msa0844960:intron | 35.0% |
| GACTCTTAAACAGTATAGCA+GGG | + | chr5_4:23593179-23593198 | None:intergenic | 35.0% | |
| TGACTCTTAAACAGTATAGC+AGG | + | chr5_4:23593180-23593199 | None:intergenic | 35.0% | |
| GACATTCACAATCGCTTTAT+AGG | + | chr5_4:23593261-23593280 | None:intergenic | 35.0% | |
| CTTAATTATCCAAAGTCCCT+AGG | + | chr5_4:23593473-23593492 | None:intergenic | 35.0% | |
| GTTCAAAAGTTGTCAAAGAG+TGG | + | chr5_4:23593521-23593540 | None:intergenic | 35.0% | |
| TCATTACTCAGCAAGAGAAA+TGG | - | chr5_4:23593673-23593692 | Msa0844960:intron | 35.0% | |
| AAAAACTGTTGCAGTTTGGT+AGG | + | chr5_4:23593742-23593761 | None:intergenic | 35.0% | |
| TTGCAGTCTCATATAATGTG+GGG | + | chr5_4:23593856-23593875 | None:intergenic | 35.0% | |
| CTTGCAGTCTCATATAATGT+GGG | + | chr5_4:23593857-23593876 | None:intergenic | 35.0% | |
| ! | TTCTCAATGTTTTTCATGGC+AGG | - | chr5_4:23594055-23594074 | Msa0844960:intron | 35.0% |
| ! | GACCCAGAGAATTCAAATTT+TGG | - | chr5_4:23594094-23594113 | Msa0844960:intron | 35.0% |
| TAAGATGGCACAGTCAATTA+AGG | - | chr5_4:23594139-23594158 | Msa0844960:intron | 35.0% | |
| ! | CATGTGACCAAACAGATTTT+TGG | - | chr5_4:23594223-23594242 | Msa0844960:intron | 35.0% |
| AAGCCATTCTGTAACCAATA+GGG | + | chr5_4:23594484-23594503 | None:intergenic | 35.0% | |
| TAAGCCATTCTGTAACCAAT+AGG | + | chr5_4:23594485-23594504 | None:intergenic | 35.0% | |
| !!! | AAGAAGGGTATTTTGGAGTT+AGG | - | chr5_4:23594922-23594941 | Msa0844960:intron | 35.0% |
| ACTGAGAGAAGAGTAAACAA+TGG | - | chr5_4:23595117-23595136 | Msa0844960:intron | 35.0% | |
| TTGCAGGAAGTTGCAAATAT+GGG | - | chr5_4:23595567-23595586 | Msa0844960:intron | 35.0% | |
| GGTAATAACAGGTTAATGCA+GGG | + | chr5_4:23595710-23595729 | None:intergenic | 35.0% | |
| CTGAAACATTCGGTAATAAC+AGG | + | chr5_4:23595721-23595740 | None:intergenic | 35.0% | |
| CCGAATGTTTCAGTTATGTA+TGG | - | chr5_4:23595728-23595747 | Msa0844960:intron | 35.0% | |
| ACATTTCTTGATCCATCTAG+TGG | - | chr5_4:23596153-23596172 | Msa0844960:intron | 35.0% | |
| ! | GTCTGTCATTTGATAATACG+GGG | - | chr5_4:23596339-23596358 | Msa0844960:intron | 35.0% |
| AATGTCCTGCTTTCATAACT+TGG | - | chr5_4:23596392-23596411 | Msa0844960:intron | 35.0% | |
| AAACTCCAAGTTATGAAAGC+AGG | + | chr5_4:23596400-23596419 | None:intergenic | 35.0% | |
| AGTCATTGTCCAGTTTAGAT+AGG | - | chr5_4:23596480-23596499 | Msa0844960:intron | 35.0% | |
| GCTAAATCAAACCTCAACAA+CGG | + | chr5_4:23596563-23596582 | None:intergenic | 35.0% | |
| ! | TTACAATATTTTCCCCCATG+TGG | - | chr5_4:23596596-23596615 | Msa0844960:intron | 35.0% |
| TGTTATGCATCTTTCCACAT+GGG | + | chr5_4:23596613-23596632 | None:intergenic | 35.0% | |
| ATGTTATGCATCTTTCCACA+TGG | + | chr5_4:23596614-23596633 | None:intergenic | 35.0% | |
| GTATAGAAAATAAGGAACCC+TGG | + | chr5_4:23596668-23596687 | None:intergenic | 35.0% | |
| !!! | TTCCTTATTTTCTATACCCC+AGG | - | chr5_4:23596671-23596690 | Msa0844960:intron | 35.0% |
| !!! | TCCTTATTTTCTATACCCCA+GGG | - | chr5_4:23596672-23596691 | Msa0844960:intron | 35.0% |
| !! | AACATTTAGGGTCATTTTGG+TGG | - | chr5_4:23596907-23596926 | Msa0844960:intron | 35.0% |
| AGCAAGATATGCTAAATGAC+AGG | + | chr5_4:23596959-23596978 | None:intergenic | 35.0% | |
| GCTGCAGCATCATTTATTTA+TGG | + | chr5_4:23597162-23597181 | None:intergenic | 35.0% | |
| !! | TGATCATGCTTTGATTTTGC+AGG | - | chr5_4:23597367-23597386 | Msa0844960:intron | 35.0% |
| !! | GATCATGCTTTGATTTTGCA+GGG | - | chr5_4:23597368-23597387 | Msa0844960:intron | 35.0% |
| CAAAAGCAATTGGCATAAAC+AGG | + | chr5_4:23597667-23597686 | None:intergenic | 35.0% | |
| !! | ATGCCAATTGCTTTTGAATG+TGG | - | chr5_4:23597671-23597690 | Msa0844960:intron | 35.0% |
| ATGCCACATTCAAAAGCAAT+TGG | + | chr5_4:23597677-23597696 | None:intergenic | 35.0% | |
| !! | TTGCTTTTGAATGTGGCATT+TGG | - | chr5_4:23597678-23597697 | Msa0844960:intron | 35.0% |
| ACTATGATAAGCCATAGCCA+TGG | + | chr5_4:23589934-23589953 | None:intergenic | 40.0% | |
| ATGGCTATGGCTTATCATAG+TGG | - | chr5_4:23589933-23589952 | Msa0844960:three_prime_UTR | 40.0% | |
| ! | TGGCTTATCATAGTGGAATC+GGG | - | chr5_4:23589940-23589959 | Msa0844960:three_prime_UTR | 40.0% |
| !! | GAAGAAGGAAGTACCAGTTA+CGG | + | chr5_4:23589988-23590007 | None:intergenic | 40.0% |
| AGAGAGGAAGAAGAAGAAGA+AGG | + | chr5_4:23590003-23590022 | None:intergenic | 40.0% | |
| !!! | TTTGCCGTTTTTGAAGAGGA+CGG | + | chr5_4:23590098-23590117 | None:intergenic | 40.0% |
| TGATTTGATCGGTGATCTTC+AGG | - | chr5_4:23590123-23590142 | Msa0844960:three_prime_UTR | 40.0% | |
| !!! | TTTTTTTTTTTTGGGGCGGG+GGG | - | chr5_4:23590345-23590364 | Msa0844960:intron | 40.0% |
| TCCAAATTTGTGGGAGCAAA+AGG | + | chr5_4:23590486-23590505 | None:intergenic | 40.0% | |
| ! | GTTTTTGCGGTGTGATCATT+CGG | - | chr5_4:23590537-23590556 | Msa0844960:intron | 40.0% |
| !! | CCCTTTCTAGTTGCTATAAC+TGG | - | chr5_4:23590591-23590610 | Msa0844960:intron | 40.0% |
| GCCAGTTATAGCAACTAGAA+AGG | + | chr5_4:23590595-23590614 | None:intergenic | 40.0% | |
| GATGGAGAGCTTATGGTAAT+AGG | - | chr5_4:23590759-23590778 | Msa0844960:intron | 40.0% | |
| CCGGCCTATATTTATCTAGT+TGG | + | chr5_4:23590832-23590851 | None:intergenic | 40.0% | |
| ! | GCTTATTTGAGGTTACGTAC+TGG | + | chr5_4:23591087-23591106 | None:intergenic | 40.0% |
| TGAACCCCCATTCATTACTA+TGG | + | chr5_4:23591469-23591488 | None:intergenic | 40.0% | |
| ATAGTAATGAATGGGGGTTC+AGG | - | chr5_4:23591468-23591487 | Msa0844960:intron | 40.0% | |
| GTTACATGTGGTTGAAGGTA+TGG | - | chr5_4:23591646-23591665 | Msa0844960:intron | 40.0% | |
| ! | TTGAAGGTATGGAACTGCTT+CGG | - | chr5_4:23591657-23591676 | Msa0844960:intron | 40.0% |
| TGATATTGAGAAGGAGAACG+CGG | + | chr5_4:23591866-23591885 | None:intergenic | 40.0% | |
| CGTTCTCCTTCTCAATATCA+GGG | - | chr5_4:23591866-23591885 | Msa0844960:intron | 40.0% | |
| ATGAGTGAACTTAGTTCAGC+CGG | - | chr5_4:23592311-23592330 | Msa0844960:intron | 40.0% | |
| CGACTCGATAAGAATCAAGT+CGG | - | chr5_4:23592337-23592356 | Msa0844960:intron | 40.0% | |
| !!! | TGTCAATTACCATCGGCTTT+TGG | - | chr5_4:23592848-23592867 | Msa0844960:intron | 40.0% |
| GGTAGTTAATTCGTCGAACA+TGG | + | chr5_4:23593110-23593129 | None:intergenic | 40.0% | |
| AATCGCTTTATAGGCCTTGA+TGG | + | chr5_4:23593252-23593271 | None:intergenic | 40.0% | |
| AAAGCGATTGTGAATGTCAG+AGG | - | chr5_4:23593263-23593282 | Msa0844960:intron | 40.0% | |
| AAGCGATTGTGAATGTCAGA+GGG | - | chr5_4:23593264-23593283 | Msa0844960:intron | 40.0% | |
| GCCAACTTCATGAAAACCTA+TGG | - | chr5_4:23593328-23593347 | Msa0844960:intron | 40.0% | |
| ! | GCCATAGGTTTTCATGAAGT+TGG | + | chr5_4:23593332-23593351 | None:intergenic | 40.0% |
| GTTTAGAGATTACTGCGTAC+TGG | + | chr5_4:23593366-23593385 | None:intergenic | 40.0% | |
| TCTTGGAATAGTTGAGGTCA+TGG | + | chr5_4:23593388-23593407 | None:intergenic | 40.0% | |
| AGATAGGCCTCTATATGTCT+TGG | + | chr5_4:23593405-23593424 | None:intergenic | 40.0% | |
| ! | AGGCCTATCTCTTTTAACAC+TGG | - | chr5_4:23593415-23593434 | Msa0844960:CDS | 40.0% |
| AGAGAGAAAAAGGAAGAGAG+AGG | + | chr5_4:23593578-23593597 | None:intergenic | 40.0% | |
| ! | GGAGGCTTATTATAGTTTGC+CGG | + | chr5_4:23593721-23593740 | None:intergenic | 40.0% |
| TCTTAAAACGGGTACACATG+AGG | - | chr5_4:23593787-23593806 | Msa0844960:intron | 40.0% | |
| AATTTCCCTTAATCCTCCAC+CGG | - | chr5_4:23593816-23593835 | Msa0844960:intron | 40.0% | |
| GCTTGCAGTCTCATATAATG+TGG | + | chr5_4:23593858-23593877 | None:intergenic | 40.0% | |
| TGTCCTTAATATGAGGGATG+TGG | - | chr5_4:23593885-23593904 | Msa0844960:intron | 40.0% | |
| TTTACCCACATTTGCCACAT+TGG | - | chr5_4:23593912-23593931 | Msa0844960:intron | 40.0% | |
| CTTTATATAGGTGCAAGTGC+AGG | + | chr5_4:23594200-23594219 | None:intergenic | 40.0% | |
| ! | GAACCCTATTGGTTACAGAA+TGG | - | chr5_4:23594478-23594497 | Msa0844960:intron | 40.0% |
| TGTTGGGCTCTCTGATTATA+AGG | - | chr5_4:23594561-23594580 | Msa0844960:intron | 40.0% | |
| TCAATTCCATTATCCAGGAC+TGG | + | chr5_4:23594658-23594677 | None:intergenic | 40.0% | |
| ATGGGATGAAAGTAATGCTG+TGG | - | chr5_4:23594731-23594750 | Msa0844960:intron | 40.0% | |
| TACGTTGTATATACCCTCTC+AGG | - | chr5_4:23595352-23595371 | Msa0844960:intron | 40.0% | |
| TTGTATATACCCTCTCAGGA+TGG | - | chr5_4:23595356-23595375 | Msa0844960:intron | 40.0% | |
| GAATTCAGTGCTTGAGAATC+AGG | - | chr5_4:23595385-23595404 | Msa0844960:intron | 40.0% | |
| TTCAATGCCTGGGAAGAAAA+TGG | - | chr5_4:23595501-23595520 | Msa0844960:intron | 40.0% | |
| TCAATGCCTGGGAAGAAAAT+GGG | - | chr5_4:23595502-23595521 | Msa0844960:intron | 40.0% | |
| TGATTTAACTGTGTGGTTGC+AGG | - | chr5_4:23595551-23595570 | Msa0844960:intron | 40.0% | |
| GTTGCAGGAAGTTGCAAATA+TGG | - | chr5_4:23595566-23595585 | Msa0844960:intron | 40.0% | |
| GGAAGTTGCAAATATGGGAT+TGG | - | chr5_4:23595572-23595591 | Msa0844960:intron | 40.0% | |
| CGGTAATAACAGGTTAATGC+AGG | + | chr5_4:23595711-23595730 | None:intergenic | 40.0% | |
| !! | ATCGATAGTGGAAACCAAAC+AGG | - | chr5_4:23596088-23596107 | Msa0844960:CDS | 40.0% |
| TCTAGATACAAGGTCCTGTT+TGG | + | chr5_4:23596105-23596124 | None:intergenic | 40.0% | |
| !! | TTTTCAGGGAACTATGCCAA+AGG | - | chr5_4:23596202-23596221 | Msa0844960:intron | 40.0% |
| !!! | GGAAGTTTTGGTTGTTCCTT+TGG | + | chr5_4:23596221-23596240 | None:intergenic | 40.0% |
| AAGGAACAACCAAAACTTCC+AGG | - | chr5_4:23596221-23596240 | Msa0844960:intron | 40.0% | |
| AGGAACAACCAAAACTTCCA+GGG | - | chr5_4:23596222-23596241 | Msa0844960:intron | 40.0% | |
| ACTAGTATGCTCACATATCC+AGG | - | chr5_4:23596251-23596270 | Msa0844960:intron | 40.0% | |
| TAGAAGAACACCTGAAATCC+TGG | + | chr5_4:23596272-23596291 | None:intergenic | 40.0% | |
| AAGCAGGACATTAAAGCATG+TGG | + | chr5_4:23596384-23596403 | None:intergenic | 40.0% | |
| ! | ATGATTCCGTTTTCACTTGC+AGG | - | chr5_4:23596439-23596458 | Msa0844960:intron | 40.0% |
| ! | TGATTCCGTTTTCACTTGCA+GGG | - | chr5_4:23596440-23596459 | Msa0844960:intron | 40.0% |
| TAAGACCCTGCAAGTGAAAA+CGG | + | chr5_4:23596448-23596467 | None:intergenic | 40.0% | |
| TGAAGCTGACCTATCTAAAC+TGG | + | chr5_4:23596492-23596511 | None:intergenic | 40.0% | |
| AGCTTCAGATACTATTGTGC+CGG | - | chr5_4:23596505-23596524 | Msa0844960:intron | 40.0% | |
| TCTAGATTATCCAAACCACC+CGG | + | chr5_4:23596527-23596546 | None:intergenic | 40.0% | |
| ATAATCTAGAGAAGCAGCGA+AGG | - | chr5_4:23596537-23596556 | Msa0844960:intron | 40.0% | |
| TTATGCATCTTTCCACATGG+GGG | + | chr5_4:23596611-23596630 | None:intergenic | 40.0% | |
| GTTATGCATCTTTCCACATG+GGG | + | chr5_4:23596612-23596631 | None:intergenic | 40.0% | |
| TCCCTGGGGTATAGAAAATA+AGG | + | chr5_4:23596676-23596695 | None:intergenic | 40.0% | |
| ! | TTATTTTCTATACCCCAGGG+AGG | - | chr5_4:23596675-23596694 | Msa0844960:intron | 40.0% |
| AGGATGAAAGCTCTTTGTGA+AGG | - | chr5_4:23596815-23596834 | Msa0844960:intron | 40.0% | |
| GGATGAAAGCTCTTTGTGAA+GGG | - | chr5_4:23596816-23596835 | Msa0844960:intron | 40.0% | |
| ! | AAGGCAAATTTTCCTCTGCT+TGG | - | chr5_4:23597184-23597203 | Msa0844960:intron | 40.0% |
| TGAAAACTCTGATTGACCTC+AGG | - | chr5_4:23597259-23597278 | Msa0844960:intron | 40.0% | |
| TGAGTTAACACAAGTTCCTG+AGG | + | chr5_4:23597278-23597297 | None:intergenic | 40.0% | |
| CACAACAGAAAGTCATTAGC+AGG | + | chr5_4:23597509-23597528 | None:intergenic | 40.0% | |
| TATATGCTTGCAGGGAAGGA+AGG | + | chr5_4:23589838-23589857 | None:intergenic | 45.0% | |
| TAGCTATATGCTTGCAGGGA+AGG | + | chr5_4:23589842-23589861 | None:intergenic | 45.0% | |
| TGCGTAGCTATATGCTTGCA+GGG | + | chr5_4:23589846-23589865 | None:intergenic | 45.0% | |
| TTGCGTAGCTATATGCTTGC+AGG | + | chr5_4:23589847-23589866 | None:intergenic | 45.0% | |
| !! | TCACTTTTCCGCTCCTTTTC+AGG | - | chr5_4:23590061-23590080 | Msa0844960:three_prime_UTR | 45.0% |
| CTGTGTAACCTGAAAAGGAG+CGG | + | chr5_4:23590072-23590091 | None:intergenic | 45.0% | |
| !!! | TTTTTTTTTTTGGGGCGGGG+GGG | - | chr5_4:23590346-23590365 | Msa0844960:intron | 45.0% |
| TCGTAATCCAGAGTTCCACT+GGG | - | chr5_4:23590381-23590400 | Msa0844960:intron | 45.0% | |
| !! | GTGGGAGCAAAAGGCATTTA+TGG | + | chr5_4:23590477-23590496 | None:intergenic | 45.0% |
| ! | GCCTTTTGCTCCCACAAATT+TGG | - | chr5_4:23590482-23590501 | Msa0844960:intron | 45.0% |
| TTACCATAAGCTCTCCATCC+AGG | + | chr5_4:23590758-23590777 | None:intergenic | 45.0% | |
| TGCTCATAGGCACTAGTGAA+AGG | - | chr5_4:23591220-23591239 | Msa0844960:intron | 45.0% | |
| GCTCATAGGCACTAGTGAAA+GGG | - | chr5_4:23591221-23591240 | Msa0844960:intron | 45.0% | |
| ATAGGCACTAGTGAAAGGGT+TGG | - | chr5_4:23591225-23591244 | Msa0844960:intron | 45.0% | |
| GTGAAAGGGTTGGAAAAGTC+CGG | - | chr5_4:23591235-23591254 | Msa0844960:intron | 45.0% | |
| TGAAAGGGTTGGAAAAGTCC+GGG | - | chr5_4:23591236-23591255 | Msa0844960:intron | 45.0% | |
| ! | GTTTGTTACCTGAGCAGCAA+TGG | + | chr5_4:23591299-23591318 | None:intergenic | 45.0% |
| TTGCTGCTCAGGTAACAAAC+TGG | - | chr5_4:23591299-23591318 | Msa0844960:CDS | 45.0% | |
| TTTGCCTTAGATTCGGCGTT+TGG | - | chr5_4:23591407-23591426 | Msa0844960:intron | 45.0% | |
| TTAGCCAAACGCCGAATCTA+AGG | + | chr5_4:23591414-23591433 | None:intergenic | 45.0% | |
| CCACATGTAACCATAACCCA+CGG | + | chr5_4:23591637-23591656 | None:intergenic | 45.0% | |
| GCGTTCTCCTTCTCAATATC+AGG | - | chr5_4:23591865-23591884 | Msa0844960:intron | 45.0% | |
| GAAACGCCCTGATATTGAGA+AGG | + | chr5_4:23591875-23591894 | None:intergenic | 45.0% | |
| GTACGTGACTAAACGCAACA+TGG | - | chr5_4:23591910-23591929 | Msa0844960:intron | 45.0% | |
| AAAAAAGCTGCAGCATGCCT+CGG | - | chr5_4:23591955-23591974 | Msa0844960:CDS | 45.0% | |
| ACTTACAGCAATGACATCCG+AGG | + | chr5_4:23591975-23591994 | None:intergenic | 45.0% | |
| CATCAGCTCTTCCATTGGAA+GGG | - | chr5_4:23592092-23592111 | Msa0844960:intron | 45.0% | |
| AGGATTCCATACCCTTCCAA+TGG | + | chr5_4:23592106-23592125 | None:intergenic | 45.0% | |
| AGCATACTATACTGTAGGGC+TGG | - | chr5_4:23592286-23592305 | Msa0844960:intron | 45.0% | |
| TGAGTGAACTTAGTTCAGCC+GGG | - | chr5_4:23592312-23592331 | Msa0844960:intron | 45.0% | |
| ! | ATTCAAGTTCCCGAGCAACT+CGG | - | chr5_4:23592416-23592435 | Msa0844960:intron | 45.0% |
| ! | ATGAGAGTCTGTAGAGTGTC+TGG | - | chr5_4:23592785-23592804 | Msa0844960:intron | 45.0% |
| ! | TGAGAGTCTGTAGAGTGTCT+GGG | - | chr5_4:23592786-23592805 | Msa0844960:intron | 45.0% |
| CTTAAACAGTATAGCAGGGC+TGG | + | chr5_4:23593175-23593194 | None:intergenic | 45.0% | |
| AGCGATTGTGAATGTCAGAG+GGG | - | chr5_4:23593265-23593284 | Msa0844960:intron | 45.0% | |
| !! | CTGGTGTCATTGATTGCCAT+AGG | + | chr5_4:23593347-23593366 | None:intergenic | 45.0% |
| CTTACATACCCTAGGGACTT+TGG | - | chr5_4:23593461-23593480 | Msa0844960:CDS | 45.0% | |
| AACTGTTGCAGTTTGGTAGG+AGG | + | chr5_4:23593739-23593758 | None:intergenic | 45.0% | |
| TGGGGTTTACCTTACTCTAC+CGG | + | chr5_4:23593838-23593857 | None:intergenic | 45.0% | |
| CTGCCACATCCCTCATATTA+AGG | + | chr5_4:23593891-23593910 | None:intergenic | 45.0% | |
| AGAAAAACAGTGGGCCAATG+TGG | + | chr5_4:23593929-23593948 | None:intergenic | 45.0% | |
| !! | ACATTGGCCCACTGTTTTTC+TGG | - | chr5_4:23593928-23593947 | Msa0844960:intron | 45.0% |
| TAGCAAGTGCTCGTCCTTAT+AGG | + | chr5_4:23594325-23594344 | None:intergenic | 45.0% | |
| CTGTGACTGTTGAACCCTAT+TGG | - | chr5_4:23594467-23594486 | Msa0844960:intron | 45.0% | |
| TTAAACTCTGCAGTTGTGCG+TGG | - | chr5_4:23594969-23594988 | Msa0844960:intron | 45.0% | |
| ATATACCCTCTCAGGATGGA+AGG | - | chr5_4:23595360-23595379 | Msa0844960:intron | 45.0% | |
| TTCAACCTTCCATCCTGAGA+GGG | + | chr5_4:23595368-23595387 | None:intergenic | 45.0% | |
| ATTCAACCTTCCATCCTGAG+AGG | + | chr5_4:23595369-23595388 | None:intergenic | 45.0% | |
| ! | TGATTGCCCATTTTCTTCCC+AGG | + | chr5_4:23595511-23595530 | None:intergenic | 45.0% |
| ! | GCTTTATTACGGCAAATGCC+CGG | - | chr5_4:23595607-23595626 | Msa0844960:CDS | 45.0% |
| AACAACCAAAACTTCCAGGG+AGG | - | chr5_4:23596225-23596244 | Msa0844960:intron | 45.0% | |
| GCTCACATATCCAGGATTTC+AGG | - | chr5_4:23596259-23596278 | Msa0844960:intron | 45.0% | |
| CAGGACATTAAAGCATGTGG+AGG | + | chr5_4:23596381-23596400 | None:intergenic | 45.0% | |
| GCTTCAGATACTATTGTGCC+GGG | - | chr5_4:23596506-23596525 | Msa0844960:intron | 45.0% | |
| TGGCACCTGTCTAAATTCCA+GGG | - | chr5_4:23596648-23596667 | Msa0844960:intron | 45.0% | |
| AGGAACCCTGGAATTTAGAC+AGG | + | chr5_4:23596656-23596675 | None:intergenic | 45.0% | |
| AATCACTCTTCAACCTCCCT+GGG | + | chr5_4:23596691-23596710 | None:intergenic | 45.0% | |
| TAATCACTCTTCAACCTCCC+TGG | + | chr5_4:23596692-23596711 | None:intergenic | 45.0% | |
| ! | TAGCATCTGTGGACTGCTAA+AGG | - | chr5_4:23597124-23597143 | Msa0844960:intron | 45.0% |
| ATAAATGATGCTGCAGCGGA+AGG | - | chr5_4:23597165-23597184 | Msa0844960:intron | 45.0% | |
| ACGGAAAGAATACCAAGCAG+AGG | + | chr5_4:23597199-23597218 | None:intergenic | 45.0% | |
| !! | CTACTTCGACCAAGTGTTGA+TGG | - | chr5_4:23597391-23597410 | Msa0844960:intron | 45.0% |
| !! | ATATATATATATATATATGA+TGG | - | chr5_4:23594712-23594731 | Msa0844960:intron | 5.0% |
| !! | TATATATATATATATATGAT+GGG | - | chr5_4:23594713-23594732 | Msa0844960:intron | 5.0% |
| GATTTCAGCGACCTGTGTGA+AGG | + | chr5_4:23589872-23589891 | None:intergenic | 50.0% | |
| TCTCTCTCTCTCTAACGCCA+TGG | - | chr5_4:23589914-23589933 | Msa0844960:three_prime_UTR | 50.0% | |
| TCTCTCTAACGCCATGGCTA+TGG | - | chr5_4:23589920-23589939 | Msa0844960:three_prime_UTR | 50.0% | |
| TAGTGGAATCGGGATCTCCA+AGG | - | chr5_4:23589950-23589969 | Msa0844960:three_prime_UTR | 50.0% | |
| TACCAGTTACGGCGATGAAG+AGG | + | chr5_4:23589977-23589996 | None:intergenic | 50.0% | |
| CGATTGTGTGTGTGAGAGAG+AGG | + | chr5_4:23590019-23590038 | None:intergenic | 50.0% | |
| !!! | CGCTCCTTTTCAGGTTACAC+AGG | - | chr5_4:23590070-23590089 | Msa0844960:three_prime_UTR | 50.0% |
| GGTGCCTGTGTAACCTGAAA+AGG | + | chr5_4:23590077-23590096 | None:intergenic | 50.0% | |
| GGCACCGTCCTCTTCAAAAA+CGG | - | chr5_4:23590091-23590110 | Msa0844960:three_prime_UTR | 50.0% | |
| !!! | TTTTTTTTTTGGGGCGGGGG+GGG | - | chr5_4:23590347-23590366 | Msa0844960:intron | 50.0% |
| CAGTGGAACTCTGGATTACG+AGG | + | chr5_4:23590382-23590401 | None:intergenic | 50.0% | |
| CTCGTAATCCAGAGTTCCAC+TGG | - | chr5_4:23590380-23590399 | Msa0844960:intron | 50.0% | |
| GAACAATCCCAGTGGAACTC+TGG | + | chr5_4:23590391-23590410 | None:intergenic | 50.0% | |
| TCCACCCATGAATCGAACTC+AGG | - | chr5_4:23590409-23590428 | Msa0844960:intron | 50.0% | |
| TCCTGAGTTCGATTCATGGG+TGG | + | chr5_4:23590413-23590432 | None:intergenic | 50.0% | |
| GATGCTTTCGTAAGCCATCC+TGG | - | chr5_4:23590737-23590756 | Msa0844960:intron | 50.0% | |
| CTTTCGTAAGCCATCCTGGA+TGG | - | chr5_4:23590741-23590760 | Msa0844960:intron | 50.0% | |
| CATAAGCTCTCCATCCAGGA+TGG | + | chr5_4:23590754-23590773 | None:intergenic | 50.0% | |
| CATCCTGGATGGAGAGCTTA+TGG | - | chr5_4:23590752-23590771 | Msa0844960:intron | 50.0% | |
| GAAAGGGTTGGAAAAGTCCG+GGG | - | chr5_4:23591237-23591256 | Msa0844960:intron | 50.0% | |
| TACCTGAGCAGCAATGGCAT+CGG | + | chr5_4:23591293-23591312 | None:intergenic | 50.0% | |
| ! | CCGTGGGTTATGGTTACATG+TGG | - | chr5_4:23591634-23591653 | Msa0844960:intron | 50.0% |
| CCTTCCAATGGAAGAGCTGA+TGG | + | chr5_4:23592094-23592113 | None:intergenic | 50.0% | |
| CCATCAGCTCTTCCATTGGA+AGG | - | chr5_4:23592091-23592110 | Msa0844960:intron | 50.0% | |
| GCTCTTCCATTGGAAGGGTA+TGG | - | chr5_4:23592097-23592116 | Msa0844960:intron | 50.0% | |
| GATTCTTATCGAGTCGAGCC+CGG | + | chr5_4:23592333-23592352 | None:intergenic | 50.0% | |
| AATCGAGTCGAGTTCGAGCT+AGG | + | chr5_4:23592399-23592418 | None:intergenic | 50.0% | |
| CTCTACCGGTGGAGGATTAA+GGG | + | chr5_4:23593824-23593843 | None:intergenic | 50.0% | |
| ACTCTACCGGTGGAGGATTA+AGG | + | chr5_4:23593825-23593844 | None:intergenic | 50.0% | |
| AATCCTCCACCGGTAGAGTA+AGG | - | chr5_4:23593826-23593845 | Msa0844960:intron | 50.0% | |
| TTACCTTACTCTACCGGTGG+AGG | + | chr5_4:23593832-23593851 | None:intergenic | 50.0% | |
| GGTTTACCTTACTCTACCGG+TGG | + | chr5_4:23593835-23593854 | None:intergenic | 50.0% | |
| TGGGCCAATGTGGCAAATGT+GGG | + | chr5_4:23593919-23593938 | None:intergenic | 50.0% | |
| CTATGTTCCACTTCCAGTCC+TGG | - | chr5_4:23594642-23594661 | Msa0844960:intron | 50.0% | |
| CCATTATCCAGGACTGGAAG+TGG | + | chr5_4:23594652-23594671 | None:intergenic | 50.0% | |
| CCACTTCCAGTCCTGGATAA+TGG | - | chr5_4:23594649-23594668 | Msa0844960:intron | 50.0% | |
| GCAACACACAGTGGCAATGT+TGG | - | chr5_4:23594832-23594851 | Msa0844960:intron | 50.0% | |
| AGTTGTGCGTGGAGGATATC+CGG | - | chr5_4:23594980-23594999 | Msa0844960:intron | 50.0% | |
| ATACCCACCTGCAAAGAGTC+CGG | + | chr5_4:23595639-23595658 | None:intergenic | 50.0% | |
| ! | GTAGACCTCCCTGGAAGTTT+TGG | + | chr5_4:23596233-23596252 | None:intergenic | 50.0% |
| AGCATACTAGTAGACCTCCC+TGG | + | chr5_4:23596242-23596261 | None:intergenic | 50.0% | |
| TCAGATACTATTGTGCCGGG+TGG | - | chr5_4:23596509-23596528 | Msa0844960:intron | 50.0% | |
| TACTATTGTGCCGGGTGGTT+TGG | - | chr5_4:23596514-23596533 | Msa0844960:intron | 50.0% | |
| GTGGCACCTGTCTAAATTCC+AGG | - | chr5_4:23596647-23596666 | Msa0844960:intron | 50.0% | |
| ATCACTCTTCAACCTCCCTG+GGG | + | chr5_4:23596690-23596709 | None:intergenic | 50.0% | |
| CAAGGCAGTGATAGCATCTG+TGG | - | chr5_4:23597113-23597132 | Msa0844960:intron | 50.0% | |
| !! | TCGACCAAGTGTTGATGGCA+AGG | - | chr5_4:23597396-23597415 | Msa0844960:intron | 50.0% |
| GAGACCTTGCCATCAACACT+TGG | + | chr5_4:23597403-23597422 | None:intergenic | 50.0% | |
| ! | CTGCCACGATGACCTCGTTT+TGG | + | chr5_4:23589799-23589818 | None:intergenic | 55.0% |
| GCTACGCAAAGCCTTCACAC+AGG | - | chr5_4:23589858-23589877 | Msa0844960:three_prime_UTR | 55.0% | |
| TACGGCGATGAAGAGGACCT+TGG | + | chr5_4:23589970-23589989 | None:intergenic | 55.0% | |
| GTCCTCTTCATCGCCGTAAC+TGG | - | chr5_4:23589972-23589991 | Msa0844960:three_prime_UTR | 55.0% | |
| !!! | TTTTTTTTTGGGGCGGGGGG+GGG | - | chr5_4:23590348-23590367 | Msa0844960:intron | 55.0% |
| CATGGGTGGAACAATCCCAG+TGG | + | chr5_4:23590399-23590418 | None:intergenic | 55.0% | |
| GTTGGAAAAGTCCGGGGATC+AGG | - | chr5_4:23591243-23591262 | Msa0844960:intron | 55.0% | |
| TTCACCTTCAGCCTGATCCC+CGG | + | chr5_4:23591257-23591276 | None:intergenic | 55.0% | |
| CGCACCATCAGCTCTTCCAT+TGG | - | chr5_4:23592087-23592106 | Msa0844960:intron | 55.0% | |
| TCGAGTCGAACCGAGTTGCT+CGG | + | chr5_4:23592429-23592448 | None:intergenic | 55.0% | |
| GTGGGCCAATGTGGCAAATG+TGG | + | chr5_4:23593920-23593939 | None:intergenic | 55.0% | |
| AACTCTGCAGTTGTGCGTGG+AGG | - | chr5_4:23594972-23594991 | Msa0844960:intron | 55.0% | |
| !!! | TTTTTTTTGGGGCGGGGGGG+GGG | - | chr5_4:23590349-23590368 | Msa0844960:intron | 60.0% |
| AAGTCCGGGGATCAGGCTGA+AGG | - | chr5_4:23591250-23591269 | Msa0844960:intron | 60.0% | |
| GGGGATCAGGCTGAAGGTGA+AGG | - | chr5_4:23591256-23591275 | Msa0844960:intron | 60.0% | |
| ! | CTGAGCAGCAATGGCATCGG+CGG | + | chr5_4:23591290-23591309 | None:intergenic | 60.0% |
| TGTGGTTCCAGCTGCCACCT+TGG | - | chr5_4:23591608-23591627 | Msa0844960:intron | 60.0% | |
| GTGGTTCCAGCTGCCACCTT+GGG | - | chr5_4:23591609-23591628 | Msa0844960:intron | 60.0% | |
| ATAACCCACGGCACCCAAGG+TGG | + | chr5_4:23591625-23591644 | None:intergenic | 60.0% | |
| ! | ACCTTGGGTGCCGTGGGTTA+TGG | - | chr5_4:23591624-23591643 | Msa0844960:intron | 60.0% |
| ACCATAACCCACGGCACCCA+AGG | + | chr5_4:23591628-23591647 | None:intergenic | 60.0% | |
| CGAGTCGAACCGAGTTGCTC+GGG | + | chr5_4:23592428-23592447 | None:intergenic | 60.0% | |
| ! | GAGCGTCGTGCAACACACAG+TGG | - | chr5_4:23594823-23594842 | Msa0844960:intron | 60.0% |
| CAAAGAGTCCGGCACTCTCC+GGG | + | chr5_4:23595628-23595647 | None:intergenic | 60.0% | |
| GCAAAGAGTCCGGCACTCTC+CGG | + | chr5_4:23595629-23595648 | None:intergenic | 60.0% | |
| !! | GAGAGTGCCGGACTCTTTGC+AGG | - | chr5_4:23595629-23595648 | Msa0844960:CDS | 60.0% |
| ! | AGTGCCGGACTCTTTGCAGG+TGG | - | chr5_4:23595632-23595651 | Msa0844960:CDS | 60.0% |
| GTGCCGGACTCTTTGCAGGT+GGG | - | chr5_4:23595633-23595652 | Msa0844960:CDS | 60.0% | |
| AGCAGCGAAGGCCGTTGTTG+AGG | - | chr5_4:23596549-23596568 | Msa0844960:intron | 60.0% | |
| !!! | TTTTTTTGGGGCGGGGGGGG+GGG | - | chr5_4:23590350-23590369 | Msa0844960:intron | 65.0% |
| CGCCGATGCCATTGCTGCTC+AGG | - | chr5_4:23591288-23591307 | Msa0844960:intron | 65.0% | |
| ! | GGCAAATGCCCGGAGAGTGC+CGG | - | chr5_4:23595617-23595636 | Msa0844960:CDS | 65.0% |
| !!! | TTTTTTGGGGCGGGGGGGGG+GGG | - | chr5_4:23590351-23590370 | Msa0844960:intron | 70.0% |
| ACGGCACCCAAGGTGGCAGC+TGG | + | chr5_4:23591618-23591637 | None:intergenic | 70.0% | |
| ! | AGCTGCCACCTTGGGTGCCG+TGG | - | chr5_4:23591617-23591636 | Msa0844960:intron | 70.0% |
| ! | GCTGCCACCTTGGGTGCCGT+GGG | - | chr5_4:23591618-23591637 | Msa0844960:intron | 70.0% |
| !!! | TTTTTGGGGCGGGGGGGGGG+GGG | - | chr5_4:23590352-23590371 | Msa0844960:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 23589796 | 23597783 | 23589796 | ID=Msa0844960;Name=Msa0844960 |
| chr5_4 | mRNA | 23589796 | 23597783 | 23589796 | ID=Msa0844960-mRNA-1;Parent=Msa0844960;Name=Msa0844960-mRNA-1;_AED=0.05;_eAED=0.05;_QI=106|1|1|1|0.92|0.85|14|373|312 |
| chr5_4 | exon | 23589796 | 23590190 | 23589796 | ID=Msa0844960-mRNA-1:exon:9697;Parent=Msa0844960-mRNA-1 |
| chr5_4 | exon | 23591009 | 23591118 | 23591009 | ID=Msa0844960-mRNA-1:exon:9696;Parent=Msa0844960-mRNA-1 |
| chr5_4 | exon | 23591299 | 23591370 | 23591299 | ID=Msa0844960-mRNA-1:exon:9695;Parent=Msa0844960-mRNA-1 |
| chr5_4 | exon | 23591929 | 23592006 | 23591929 | ID=Msa0844960-mRNA-1:exon:9694;Parent=Msa0844960-mRNA-1 |
| chr5_4 | exon | 23592173 | 23592205 | 23592173 | ID=Msa0844960-mRNA-1:exon:9693;Parent=Msa0844960-mRNA-1 |
| chr5_4 | exon | 23592726 | 23592800 | 23592726 | ID=Msa0844960-mRNA-1:exon:9692;Parent=Msa0844960-mRNA-1 |
| chr5_4 | exon | 23593413 | 23593502 | 23593413 | ID=Msa0844960-mRNA-1:exon:9691;Parent=Msa0844960-mRNA-1 |
| chr5_4 | exon | 23595591 | 23595692 | 23595591 | ID=Msa0844960-mRNA-1:exon:9690;Parent=Msa0844960-mRNA-1 |
| chr5_4 | exon | 23595917 | 23595987 | 23595917 | ID=Msa0844960-mRNA-1:exon:9689;Parent=Msa0844960-mRNA-1 |
| chr5_4 | exon | 23596081 | 23596162 | 23596081 | ID=Msa0844960-mRNA-1:exon:9688;Parent=Msa0844960-mRNA-1 |
| chr5_4 | exon | 23596270 | 23596350 | 23596270 | ID=Msa0844960-mRNA-1:exon:9687;Parent=Msa0844960-mRNA-1 |
| chr5_4 | exon | 23597435 | 23597496 | 23597435 | ID=Msa0844960-mRNA-1:exon:9686;Parent=Msa0844960-mRNA-1 |
| chr5_4 | exon | 23597586 | 23597668 | 23597586 | ID=Msa0844960-mRNA-1:exon:9685;Parent=Msa0844960-mRNA-1 |
| chr5_4 | exon | 23597700 | 23597783 | 23597700 | ID=Msa0844960-mRNA-1:exon:9684;Parent=Msa0844960-mRNA-1 |
| chr5_4 | five_prime_UTR | 23597700 | 23597783 | 23597700 | ID=Msa0844960-mRNA-1:five_prime_utr;Parent=Msa0844960-mRNA-1 |
| chr5_4 | five_prime_UTR | 23597647 | 23597668 | 23597647 | ID=Msa0844960-mRNA-1:five_prime_utr;Parent=Msa0844960-mRNA-1 |
| chr5_4 | CDS | 23597586 | 23597646 | 23597586 | ID=Msa0844960-mRNA-1:cds;Parent=Msa0844960-mRNA-1 |
| chr5_4 | CDS | 23597435 | 23597496 | 23597435 | ID=Msa0844960-mRNA-1:cds;Parent=Msa0844960-mRNA-1 |
| chr5_4 | CDS | 23596270 | 23596350 | 23596270 | ID=Msa0844960-mRNA-1:cds;Parent=Msa0844960-mRNA-1 |
| chr5_4 | CDS | 23596081 | 23596162 | 23596081 | ID=Msa0844960-mRNA-1:cds;Parent=Msa0844960-mRNA-1 |
| chr5_4 | CDS | 23595917 | 23595987 | 23595917 | ID=Msa0844960-mRNA-1:cds;Parent=Msa0844960-mRNA-1 |
| chr5_4 | CDS | 23595591 | 23595692 | 23595591 | ID=Msa0844960-mRNA-1:cds;Parent=Msa0844960-mRNA-1 |
| chr5_4 | CDS | 23593413 | 23593502 | 23593413 | ID=Msa0844960-mRNA-1:cds;Parent=Msa0844960-mRNA-1 |
| chr5_4 | CDS | 23592726 | 23592800 | 23592726 | ID=Msa0844960-mRNA-1:cds;Parent=Msa0844960-mRNA-1 |
| chr5_4 | CDS | 23592173 | 23592205 | 23592173 | ID=Msa0844960-mRNA-1:cds;Parent=Msa0844960-mRNA-1 |
| chr5_4 | CDS | 23591929 | 23592006 | 23591929 | ID=Msa0844960-mRNA-1:cds;Parent=Msa0844960-mRNA-1 |
| chr5_4 | CDS | 23591299 | 23591370 | 23591299 | ID=Msa0844960-mRNA-1:cds;Parent=Msa0844960-mRNA-1 |
| chr5_4 | CDS | 23591009 | 23591118 | 23591009 | ID=Msa0844960-mRNA-1:cds;Parent=Msa0844960-mRNA-1 |
| chr5_4 | CDS | 23590169 | 23590190 | 23590169 | ID=Msa0844960-mRNA-1:cds;Parent=Msa0844960-mRNA-1 |
| chr5_4 | three_prime_UTR | 23589796 | 23590168 | 23589796 | ID=Msa0844960-mRNA-1:three_prime_utr;Parent=Msa0844960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
