Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0845920 | XP_003613833.1 | 80.052 | 386 | 32 | 3 | 1 | 346 | 1 | 381 | 0.0 | 565 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0845920 | sp|Q8W1E3|CDF1_ARATH | 39.934 | 303 | 143 | 10 | 56 | 346 | 23 | 298 | 6.68e-50 | 171 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0845920 | G7KGM5 | 80.052 | 386 | 32 | 3 | 1 | 346 | 1 | 381 | 0.0 | 565 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0845920 | TF | C2C2-Dof |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0725840 | Msa0845920 | 0.887949 | 9.095512e-73 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0845920 | MtrunA17_Chr5g0417601 | 80.052 | 386 | 32 | 3 | 1 | 346 | 1 | 381 | 0.0 | 565 |
| Msa0845920 | MtrunA17_Chr5g0417551 | 57.107 | 394 | 98 | 10 | 1 | 346 | 1 | 371 | 1.25e-130 | 377 |
| Msa0845920 | MtrunA17_Chr5g0417561 | 56.842 | 380 | 113 | 9 | 1 | 346 | 1 | 363 | 9.83e-127 | 367 |
| Msa0845920 | MtrunA17_Chr5g0417571 | 62.914 | 302 | 66 | 5 | 1 | 257 | 1 | 301 | 5.47e-110 | 323 |
| Msa0845920 | MtrunA17_Chr4g0042481 | 38.004 | 471 | 147 | 20 | 7 | 346 | 9 | 465 | 2.76e-66 | 216 |
| Msa0845920 | MtrunA17_Chr7g0217581 | 31.855 | 496 | 170 | 15 | 2 | 344 | 101 | 581 | 4.86e-50 | 176 |
| Msa0845920 | MtrunA17_Chr3g0092111 | 37.037 | 324 | 101 | 12 | 114 | 344 | 150 | 463 | 8.72e-46 | 162 |
| Msa0845920 | MtrunA17_Chr6g0453321 | 32.338 | 402 | 130 | 10 | 84 | 344 | 93 | 493 | 1.24e-45 | 162 |
| Msa0845920 | MtrunA17_Chr8g0355261 | 30.124 | 322 | 122 | 10 | 114 | 346 | 132 | 439 | 1.11e-32 | 126 |
| Msa0845920 | MtrunA17_Chr7g0254161 | 27.964 | 329 | 122 | 10 | 114 | 346 | 115 | 424 | 8.31e-21 | 92.8 |
| Msa0845920 | MtrunA17_Chr2g0283811 | 78.049 | 41 | 9 | 0 | 113 | 153 | 60 | 100 | 1.71e-17 | 79.0 |
| Msa0845920 | MtrunA17_Chr6g0460731 | 40.741 | 108 | 43 | 2 | 69 | 161 | 56 | 157 | 5.37e-17 | 81.3 |
| Msa0845920 | MtrunA17_Chr6g0460721 | 34.591 | 159 | 84 | 4 | 4 | 161 | 11 | 150 | 1.17e-15 | 77.0 |
| Msa0845920 | MtrunA17_Chr8g0341671 | 74.359 | 39 | 10 | 0 | 113 | 151 | 33 | 71 | 5.30e-15 | 73.2 |
| Msa0845920 | MtrunA17_Chr8g0374251 | 72.500 | 40 | 11 | 0 | 114 | 153 | 82 | 121 | 1.01e-14 | 74.3 |
| Msa0845920 | MtrunA17_Chr2g0328021 | 70.000 | 40 | 12 | 0 | 114 | 153 | 76 | 115 | 2.31e-14 | 72.4 |
| Msa0845920 | MtrunA17_Chr7g0223311 | 58.491 | 53 | 21 | 1 | 114 | 165 | 91 | 143 | 5.21e-14 | 72.4 |
| Msa0845920 | MtrunA17_Chr8g0346551 | 44.737 | 76 | 39 | 1 | 78 | 153 | 5 | 77 | 7.80e-14 | 70.9 |
| Msa0845920 | MtrunA17_Chr4g0010151 | 67.500 | 40 | 13 | 0 | 114 | 153 | 96 | 135 | 1.70e-13 | 70.9 |
| Msa0845920 | MtrunA17_Chr4g0061761 | 72.973 | 37 | 10 | 0 | 114 | 150 | 54 | 90 | 1.91e-13 | 70.1 |
| Msa0845920 | MtrunA17_Chr3g0127201 | 67.500 | 40 | 13 | 0 | 114 | 153 | 41 | 80 | 2.35e-13 | 69.7 |
| Msa0845920 | MtrunA17_Chr8g0374111 | 49.206 | 63 | 32 | 0 | 90 | 152 | 19 | 81 | 2.59e-13 | 68.6 |
| Msa0845920 | MtrunA17_Chr4g0047001 | 68.293 | 41 | 13 | 0 | 113 | 153 | 68 | 108 | 2.86e-13 | 70.1 |
| Msa0845920 | MtrunA17_Chr3g0126201 | 61.364 | 44 | 17 | 0 | 114 | 157 | 65 | 108 | 3.99e-13 | 69.3 |
| Msa0845920 | MtrunA17_Chr2g0308011 | 74.286 | 35 | 9 | 0 | 114 | 148 | 51 | 85 | 4.18e-13 | 67.8 |
| Msa0845920 | MtrunA17_Chr8g0367161 | 64.286 | 42 | 14 | 1 | 114 | 154 | 46 | 87 | 6.84e-13 | 68.9 |
| Msa0845920 | MtrunA17_Chr4g0031411 | 67.442 | 43 | 13 | 1 | 114 | 155 | 89 | 131 | 7.18e-13 | 68.6 |
| Msa0845920 | MtrunA17_Chr1g0188851 | 64.286 | 42 | 15 | 0 | 114 | 155 | 57 | 98 | 7.22e-13 | 68.2 |
| Msa0845920 | MtrunA17_Chr1g0177251 | 65.000 | 40 | 14 | 0 | 114 | 153 | 26 | 65 | 7.57e-13 | 68.2 |
| Msa0845920 | MtrunA17_Chr7g0237921 | 65.000 | 40 | 14 | 0 | 114 | 153 | 90 | 129 | 1.10e-12 | 68.2 |
| Msa0845920 | MtrunA17_Chr4g0047761 | 35.955 | 89 | 55 | 1 | 68 | 154 | 38 | 126 | 1.14e-12 | 67.8 |
| Msa0845920 | MtrunA17_Chr2g0326001 | 65.854 | 41 | 14 | 0 | 113 | 153 | 53 | 93 | 2.02e-12 | 67.0 |
| Msa0845920 | MtrunA17_Chr4g0030051 | 49.231 | 65 | 27 | 2 | 90 | 152 | 33 | 93 | 3.84e-12 | 66.2 |
| Msa0845920 | MtrunA17_Chr5g0411951 | 65.789 | 38 | 13 | 0 | 113 | 150 | 56 | 93 | 4.02e-12 | 66.6 |
| Msa0845920 | MtrunA17_Chr3g0117601 | 44.286 | 70 | 34 | 2 | 83 | 150 | 45 | 111 | 1.71e-11 | 64.7 |
| Msa0845920 | MtrunA17_Chr2g0282051 | 67.500 | 40 | 12 | 1 | 114 | 153 | 60 | 98 | 1.95e-11 | 63.9 |
| Msa0845920 | MtrunA17_Chr2g0282441 | 61.538 | 39 | 15 | 0 | 113 | 151 | 38 | 76 | 3.46e-11 | 63.5 |
| Msa0845920 | MtrunA17_Chr2g0282511 | 68.571 | 35 | 11 | 0 | 114 | 148 | 59 | 93 | 3.83e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0845920 | AT5G62430.1 | 39.934 | 303 | 143 | 10 | 56 | 346 | 23 | 298 | 6.79e-51 | 171 |
| Msa0845920 | AT5G39660.3 | 36.697 | 327 | 131 | 13 | 91 | 344 | 132 | 455 | 9.59e-44 | 157 |
| Msa0845920 | AT5G39660.1 | 36.697 | 327 | 131 | 13 | 91 | 344 | 132 | 455 | 9.59e-44 | 157 |
| Msa0845920 | AT5G39660.2 | 36.697 | 327 | 131 | 13 | 91 | 344 | 132 | 455 | 9.59e-44 | 157 |
| Msa0845920 | AT1G69570.1 | 35.955 | 267 | 118 | 12 | 114 | 344 | 146 | 395 | 2.19e-34 | 130 |
| Msa0845920 | AT1G26790.1 | 32.721 | 272 | 120 | 11 | 114 | 346 | 125 | 372 | 2.22e-26 | 108 |
| Msa0845920 | AT3G47500.1 | 43.636 | 165 | 66 | 7 | 200 | 346 | 293 | 448 | 5.49e-25 | 105 |
| Msa0845920 | AT3G47500.1 | 45.652 | 92 | 36 | 2 | 73 | 163 | 95 | 173 | 1.85e-17 | 83.6 |
| Msa0845920 | AT1G29160.1 | 54.795 | 73 | 30 | 1 | 81 | 153 | 46 | 115 | 7.53e-19 | 83.2 |
| Msa0845920 | AT2G34140.1 | 31.953 | 169 | 62 | 4 | 7 | 166 | 9 | 133 | 5.22e-18 | 80.9 |
| Msa0845920 | AT1G51700.1 | 50.000 | 68 | 21 | 1 | 97 | 151 | 17 | 84 | 1.18e-15 | 75.1 |
| Msa0845920 | AT5G60200.1 | 42.222 | 90 | 46 | 2 | 77 | 163 | 35 | 121 | 2.42e-15 | 75.5 |
| Msa0845920 | AT1G07640.1 | 65.217 | 46 | 16 | 0 | 114 | 159 | 35 | 80 | 6.50e-15 | 74.3 |
| Msa0845920 | AT1G07640.2 | 65.217 | 46 | 16 | 0 | 114 | 159 | 91 | 136 | 8.02e-15 | 74.7 |
| Msa0845920 | AT1G07640.3 | 65.217 | 46 | 16 | 0 | 114 | 159 | 99 | 144 | 9.37e-15 | 74.7 |
| Msa0845920 | AT3G21270.1 | 72.500 | 40 | 11 | 0 | 113 | 152 | 42 | 81 | 1.18e-14 | 72.4 |
| Msa0845920 | AT3G55370.3 | 45.070 | 71 | 37 | 1 | 85 | 153 | 104 | 174 | 2.26e-14 | 73.9 |
| Msa0845920 | AT3G55370.1 | 45.070 | 71 | 37 | 1 | 85 | 153 | 59 | 129 | 3.11e-14 | 73.2 |
| Msa0845920 | AT3G55370.2 | 45.070 | 71 | 37 | 1 | 85 | 153 | 59 | 129 | 3.74e-14 | 73.2 |
| Msa0845920 | AT5G60850.1 | 72.500 | 40 | 11 | 0 | 114 | 153 | 65 | 104 | 4.47e-14 | 72.4 |
| Msa0845920 | AT5G65590.1 | 67.500 | 40 | 13 | 0 | 114 | 153 | 55 | 94 | 3.16e-13 | 70.1 |
| Msa0845920 | AT3G52440.1 | 47.826 | 69 | 35 | 1 | 114 | 181 | 39 | 107 | 4.62e-13 | 68.6 |
| Msa0845920 | AT2G28810.1 | 44.118 | 68 | 35 | 1 | 84 | 151 | 81 | 145 | 4.72e-13 | 69.7 |
| Msa0845920 | AT2G28810.2 | 44.118 | 68 | 35 | 1 | 84 | 151 | 64 | 128 | 4.80e-13 | 69.7 |
| Msa0845920 | AT4G24060.1 | 67.500 | 40 | 13 | 0 | 114 | 153 | 67 | 106 | 5.44e-13 | 69.7 |
| Msa0845920 | AT5G02460.1 | 42.466 | 73 | 40 | 1 | 83 | 153 | 76 | 148 | 5.71e-13 | 69.7 |
| Msa0845920 | AT3G52440.2 | 47.826 | 69 | 35 | 1 | 114 | 181 | 58 | 126 | 6.40e-13 | 68.6 |
| Msa0845920 | AT4G38000.1 | 50.000 | 62 | 30 | 1 | 114 | 174 | 55 | 116 | 8.17e-13 | 67.8 |
| Msa0845920 | AT2G37590.1 | 63.415 | 41 | 15 | 0 | 113 | 153 | 102 | 142 | 8.89e-13 | 68.9 |
| Msa0845920 | AT2G28510.1 | 65.000 | 40 | 14 | 0 | 114 | 153 | 62 | 101 | 1.67e-12 | 67.4 |
| Msa0845920 | AT3G50410.1 | 66.667 | 39 | 13 | 0 | 113 | 151 | 43 | 81 | 1.69e-12 | 67.0 |
| Msa0845920 | AT1G28310.1 | 67.500 | 40 | 13 | 0 | 114 | 153 | 41 | 80 | 1.85e-12 | 67.8 |
| Msa0845920 | AT3G45610.1 | 32.500 | 120 | 76 | 2 | 74 | 191 | 17 | 133 | 1.98e-12 | 66.6 |
| Msa0845920 | AT1G28310.2 | 67.500 | 40 | 13 | 0 | 114 | 153 | 65 | 104 | 2.02e-12 | 67.8 |
| Msa0845920 | AT3G61850.2 | 65.000 | 40 | 14 | 0 | 114 | 153 | 76 | 115 | 2.44e-12 | 67.0 |
| Msa0845920 | AT3G61850.3 | 65.000 | 40 | 14 | 0 | 114 | 153 | 76 | 115 | 2.44e-12 | 67.0 |
| Msa0845920 | AT3G61850.1 | 65.000 | 40 | 14 | 0 | 114 | 153 | 88 | 127 | 2.81e-12 | 67.0 |
| Msa0845920 | AT3G61850.5 | 65.000 | 40 | 14 | 0 | 114 | 153 | 76 | 115 | 3.02e-12 | 67.0 |
| Msa0845920 | AT3G61850.4 | 65.000 | 40 | 14 | 0 | 114 | 153 | 88 | 127 | 3.13e-12 | 67.0 |
| Msa0845920 | AT1G21340.1 | 57.778 | 45 | 19 | 0 | 114 | 158 | 52 | 96 | 4.01e-12 | 66.2 |
| Msa0845920 | AT4G00940.1 | 63.415 | 41 | 15 | 0 | 113 | 153 | 81 | 121 | 4.85e-12 | 66.2 |
| Msa0845920 | AT4G00940.3 | 63.415 | 41 | 15 | 0 | 113 | 153 | 81 | 121 | 4.85e-12 | 66.2 |
| Msa0845920 | AT4G00940.2 | 63.415 | 41 | 15 | 0 | 113 | 153 | 81 | 121 | 4.85e-12 | 66.2 |
| Msa0845920 | AT5G66940.1 | 64.103 | 39 | 14 | 0 | 114 | 152 | 46 | 84 | 1.45e-11 | 63.9 |
| Msa0845920 | AT4G21050.1 | 65.000 | 40 | 14 | 0 | 114 | 153 | 38 | 77 | 1.50e-11 | 63.5 |
| Msa0845920 | AT1G64620.1 | 42.029 | 69 | 31 | 2 | 89 | 148 | 29 | 97 | 2.03e-11 | 64.7 |
| Msa0845920 | AT1G47655.1 | 39.437 | 71 | 33 | 1 | 78 | 148 | 17 | 77 | 4.45e-11 | 62.0 |
| Msa0845920 | AT5G62940.1 | 64.865 | 37 | 13 | 0 | 114 | 150 | 87 | 123 | 7.91e-11 | 63.2 |
Find 69 sgRNAs with CRISPR-Local
Find 600 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAACTCTTTGCAATTTCATT+AGG | 0.246474 | 5_4:-25339756 | None:intergenic |
| GGTCAAAATTCAACTACATT+AGG | 0.257812 | 5_4:+25339618 | Msa0845920:CDS |
| TTTCATGGGATTTGCATCTA+AGG | 0.299102 | 5_4:+25339818 | Msa0845920:CDS |
| ACCACCATAGTATGCTATAT+TGG | 0.313954 | 5_4:-25339547 | None:intergenic |
| TCATCAATTCTCAGTGTCTT+AGG | 0.335867 | 5_4:-25339732 | None:intergenic |
| CAGTTTAGAAGTTTCTATTT+CGG | 0.347739 | 5_4:-25333951 | None:intergenic |
| AACTCTTTGCAATTTCATTA+GGG | 0.357550 | 5_4:-25339755 | None:intergenic |
| GTCAAAATTCAACTACATTA+GGG | 0.362039 | 5_4:+25339619 | Msa0845920:CDS |
| TGCCAGAGGTATTGGACTTC+CGG | 0.368367 | 5_4:+25339282 | Msa0845920:CDS |
| TCTTCCTTAGAGTTAGAGTT+TGG | 0.372291 | 5_4:+25332615 | Msa0845920:CDS |
| ACATGATGCAAAGAGATATA+AGG | 0.388068 | 5_4:+25332722 | Msa0845920:CDS |
| AGCATACTATGGTGGTTGTT+TGG | 0.397807 | 5_4:+25339554 | Msa0845920:CDS |
| GGGGAACATGAAGATGAATA+AGG | 0.405221 | 5_4:-25332675 | None:intergenic |
| TTCATGGGATTTGCATCTAA+GGG | 0.409566 | 5_4:+25339819 | Msa0845920:CDS |
| CCACCATAGTATGCTATATT+GGG | 0.409801 | 5_4:-25339546 | None:intergenic |
| TATCCCAATATAGCATACTA+TGG | 0.411753 | 5_4:+25339543 | Msa0845920:CDS |
| AGTACTACTATCTTGACCTT+TGG | 0.413423 | 5_4:+25339378 | Msa0845920:CDS |
| AGAACCAAACTCTAACTCTA+AGG | 0.422367 | 5_4:-25332619 | None:intergenic |
| TAACTCTAAGGAAGAATCAT+TGG | 0.432927 | 5_4:-25332607 | None:intergenic |
| CTCTTTGCATCATGTTCAGT+TGG | 0.433065 | 5_4:-25332714 | None:intergenic |
| GACACAGGATAACACATTGC+AGG | 0.443245 | 5_4:-25339516 | None:intergenic |
| GTCTCTTGTGTTCCATGAGA+GGG | 0.449681 | 5_4:+25339908 | Msa0845920:CDS |
| CATATTTCTCGTGGCTCCTC+CGG | 0.451801 | 5_4:-25339301 | None:intergenic |
| GTTGGAGAATTTACTTCAGA+TGG | 0.453916 | 5_4:-25332696 | None:intergenic |
| AAGGAATCTTCATGAAGAAA+AGG | 0.453966 | 5_4:-25332642 | None:intergenic |
| GGGTTCTCAACAAGGCTTGA+AGG | 0.457419 | 5_4:-25333914 | None:intergenic |
| CAACACTAGGAATCAAGAAT+GGG | 0.479648 | 5_4:+25339787 | Msa0845920:CDS |
| TGTTCCATGAGAGGGTTTGA+AGG | 0.482746 | 5_4:+25339916 | Msa0845920:CDS |
| TATTATTTCTTTCTGATCCA+AGG | 0.488816 | 5_4:-25339695 | None:intergenic |
| CACACCTTCAAACCCTCTCA+TGG | 0.492200 | 5_4:-25339920 | None:intergenic |
| CTCCGGAAGTCCAATACCTC+TGG | 0.499281 | 5_4:-25339284 | None:intergenic |
| CTTGACAAGAAAGTGAATGT+TGG | 0.504154 | 5_4:+25339432 | Msa0845920:CDS |
| AGAAATATGATTGTAGGTGC+TGG | 0.515721 | 5_4:+25339315 | Msa0845920:CDS |
| AAATTGCAAAGAGTTCTATA+TGG | 0.517606 | 5_4:+25339763 | Msa0845920:CDS |
| GGTCTCTTGTGTTCCATGAG+AGG | 0.519430 | 5_4:+25339907 | Msa0845920:CDS |
| CTAATCCTGTCGCTTTATCA+AGG | 0.521791 | 5_4:+25339886 | Msa0845920:CDS |
| TCAACACTAGGAATCAAGAA+TGG | 0.523718 | 5_4:+25339786 | Msa0845920:CDS |
| TTGGAGAATTTACTTCAGAT+GGG | 0.525790 | 5_4:-25332695 | None:intergenic |
| GCCACGAGAAATATGATTGT+AGG | 0.539882 | 5_4:+25339309 | Msa0845920:CDS |
| GTGGTTGTTTGGTACCATCA+TGG | 0.540880 | 5_4:+25339565 | Msa0845920:CDS |
| AACAAACTCAATGCAGCCAA+TGG | 0.545923 | 5_4:+25339348 | Msa0845920:CDS |
| AGAAGTTTCTATTTCGGACG+AGG | 0.555268 | 5_4:-25333945 | None:intergenic |
| TTAGGGAAACATTCAAGAGA+TGG | 0.556627 | 5_4:+25339636 | Msa0845920:CDS |
| AGTAGTACTATGCAATCCAT+TGG | 0.564693 | 5_4:-25339364 | None:intergenic |
| TAGGGAAACATTCAAGAGAT+GGG | 0.572707 | 5_4:+25339637 | Msa0845920:CDS |
| AGAGACCTTGATAAAGCGAC+AGG | 0.575409 | 5_4:-25339891 | None:intergenic |
| GAAGTTTCTATTTCGGACGA+GGG | 0.576147 | 5_4:-25333944 | None:intergenic |
| TGAATAAGGACTATGATCAA+AGG | 0.577518 | 5_4:-25332661 | None:intergenic |
| CATGGGATTTGCATCTAAGG+GGG | 0.590579 | 5_4:+25339821 | Msa0845920:CDS |
| AGTAGAAGAATCTGATCCAA+AGG | 0.598047 | 5_4:-25339394 | None:intergenic |
| AACTCCGAGAAAGAAAACCT+TGG | 0.600186 | 5_4:+25339678 | Msa0845920:CDS |
| TGGAGAATTTACTTCAGATG+GGG | 0.602275 | 5_4:-25332694 | None:intergenic |
| ACCTACAATCATATTTCTCG+TGG | 0.613151 | 5_4:-25339310 | None:intergenic |
| TCATGGGATTTGCATCTAAG+GGG | 0.617988 | 5_4:+25339820 | Msa0845920:CDS |
| ATAGATTGTACATTCCATGA+TGG | 0.621316 | 5_4:-25339579 | None:intergenic |
| AGTTCTATATGGTCAACACT+AGG | 0.622239 | 5_4:+25339774 | Msa0845920:CDS |
| ACACAGGATAACACATTGCA+GGG | 0.622856 | 5_4:-25339515 | None:intergenic |
| ATTAGCTTGCAAAACTGATG+AGG | 0.636555 | 5_4:-25339868 | None:intergenic |
| CCCAATATAGCATACTATGG+TGG | 0.644675 | 5_4:+25339546 | Msa0845920:CDS |
| ATGGGATTTGCATCTAAGGG+GGG | 0.646627 | 5_4:+25339822 | Msa0845920:CDS |
| ATCCTCTGTAGATTGGAATG+AGG | 0.648122 | 5_4:-25333876 | None:intergenic |
| AACACTAGGAATCAAGAATG+GGG | 0.652094 | 5_4:+25339788 | Msa0845920:CDS |
| ATATTGGGATAGAATGACAC+AGG | 0.661691 | 5_4:-25339531 | None:intergenic |
| GGGTTCCAAGAAAACTGTGG+AGG | 0.676664 | 5_4:-25339495 | None:intergenic |
| CAGAGGTATTGGACTTCCGG+AGG | 0.686773 | 5_4:+25339285 | Msa0845920:CDS |
| TCTATCTCGACACAATCTTG+CGG | 0.698726 | 5_4:+25339597 | Msa0845920:CDS |
| ACACTAGGAATCAAGAATGG+GGG | 0.702331 | 5_4:+25339789 | Msa0845920:CDS |
| GGCCTCATTCCAATCTACAG+AGG | 0.711504 | 5_4:+25333874 | Msa0845920:intron |
| GCAGGGTTCCAAGAAAACTG+TGG | 0.717555 | 5_4:-25339498 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAGATAATTAAAGATATTAA+CGG | + | chr5_4:25333106-25333125 | Msa0845920:intron | 10.0% |
| !! | TATTAATTATGATTTAACAA+CGG | - | chr5_4:25333379-25333398 | None:intergenic | 10.0% |
| !! | AATAAATTAAAATATCATGA+AGG | + | chr5_4:25333558-25333577 | Msa0845920:intron | 10.0% |
| !!! | TATTTTTTTCAAACAAAAAG+TGG | - | chr5_4:25333236-25333255 | None:intergenic | 15.0% |
| !! | TTTGTTTGAAAAAAATACAA+AGG | + | chr5_4:25333239-25333258 | Msa0845920:intron | 15.0% |
| !! | TTGTTTGAAAAAAATACAAA+GGG | + | chr5_4:25333240-25333259 | Msa0845920:intron | 15.0% |
| !!! | ATTTTGTATTCTCATATATT+TGG | + | chr5_4:25334110-25334129 | Msa0845920:intron | 15.0% |
| !! | TTAAAGAAAATATTGAGAAT+GGG | - | chr5_4:25334509-25334528 | None:intergenic | 15.0% |
| !! | ATTAAAGAAAATATTGAGAA+TGG | - | chr5_4:25334510-25334529 | None:intergenic | 15.0% |
| !! | AACTAAAAAAATCTTTGTAT+GGG | - | chr5_4:25335472-25335491 | None:intergenic | 15.0% |
| !! | AAACTAAAAAAATCTTTGTA+TGG | - | chr5_4:25335473-25335492 | None:intergenic | 15.0% |
| !! | CAAAAAATTCTATAATTCAA+TGG | - | chr5_4:25336542-25336561 | None:intergenic | 15.0% |
| !!! | CATTGAATTATAGAATTTTT+TGG | + | chr5_4:25336540-25336559 | Msa0845920:intron | 15.0% |
| !!! | TTATAGAATTTTTTGGTAAT+TGG | + | chr5_4:25336547-25336566 | Msa0845920:intron | 15.0% |
| !!! | TTAGAATTTGAATTTTTGTT+TGG | + | chr5_4:25337004-25337023 | Msa0845920:intron | 15.0% |
| !!! | TCTTTATTTTTGAATAATGA+AGG | + | chr5_4:25337294-25337313 | Msa0845920:intron | 15.0% |
| !!! | ATTTTGTATTCTCATATATT+TGG | + | chr5_4:25334110-25334129 | Msa0845920:intron | 15.0% |
| !!! | ATTGGACATGTATTTTAAAA+CGG | - | chr5_4:25332942-25332961 | None:intergenic | 20.0% |
| !! | CATACATTAGTTAAAAAGTA+TGG | - | chr5_4:25333001-25333020 | None:intergenic | 20.0% |
| !! | TGTTTGAAAAAAATACAAAG+GGG | + | chr5_4:25333241-25333260 | Msa0845920:intron | 20.0% |
| !! | AAAAACTTTATCTTAATCAG+TGG | + | chr5_4:25333466-25333485 | Msa0845920:intron | 20.0% |
| !! | ATATACAACAGAATATCATA+TGG | - | chr5_4:25333585-25333604 | None:intergenic | 20.0% |
| !!! | ACTTTGTTCATCAATTTTAT+GGG | - | chr5_4:25333981-25334000 | None:intergenic | 20.0% |
| !! | TAAACATGGAGAATAAAAAA+TGG | + | chr5_4:25334245-25334264 | Msa0845920:intron | 20.0% |
| !! | TAAGAGATAAATTTGCAAAT+AGG | + | chr5_4:25335974-25335993 | Msa0845920:intron | 20.0% |
| !!! | ATACCAATTTTGGTATAAAA+AGG | + | chr5_4:25336493-25336512 | Msa0845920:intron | 20.0% |
| !!! | AATAACATTTGTATCCTTTT+TGG | + | chr5_4:25336572-25336591 | Msa0845920:intron | 20.0% |
| !! | AGGCATTCTATTTATTAAAT+AGG | + | chr5_4:25336771-25336790 | Msa0845920:intron | 20.0% |
| !! | CATTCTATTTATTAAATAGG+TGG | + | chr5_4:25336774-25336793 | Msa0845920:intron | 20.0% |
| !!! | GAATATTTTGAAAAATCTCT+TGG | - | chr5_4:25336967-25336986 | None:intergenic | 20.0% |
| !! | TAAACATGGAGAATAAAAAA+TGG | + | chr5_4:25334245-25334264 | Msa0845920:intron | 20.0% |
| !! | AATTCAACCATAAAGCTTTT+TGG | + | chr5_4:25332546-25332565 | Msa0845920:CDS | 25.0% |
| !! | ATTCAACCATAAAGCTTTTT+GGG | + | chr5_4:25332547-25332566 | Msa0845920:CDS | 25.0% |
| ! | TCCAATAAATAGAACCAATA+TGG | - | chr5_4:25332767-25332786 | None:intergenic | 25.0% |
| !! | ATGATTTAACAACGGTTTTA+CGG | - | chr5_4:25333371-25333390 | None:intergenic | 25.0% |
| ! | TCATTGTTAATGATCTTACA+TGG | + | chr5_4:25333437-25333456 | Msa0845920:intron | 25.0% |
| ! | ATTGACATTATAAAGCTATG+AGG | - | chr5_4:25333786-25333805 | None:intergenic | 25.0% |
| ! | CAGTTTAGAAGTTTCTATTT+CGG | - | chr5_4:25333954-25333973 | None:intergenic | 25.0% |
| !! | CACTTTGTTCATCAATTTTA+TGG | - | chr5_4:25333982-25334001 | None:intergenic | 25.0% |
| !! | TTTGGAATAAAAGAGTTACA+AGG | + | chr5_4:25334128-25334147 | Msa0845920:intron | 25.0% |
| ! | AGTTACAAGGTTTAAATAGA+GGG | + | chr5_4:25334141-25334160 | Msa0845920:intron | 25.0% |
| ! | AAAATAACTCCTCATAAACA+TGG | + | chr5_4:25334231-25334250 | Msa0845920:intron | 25.0% |
| !! | TTTTATTCTCCATGTTTATG+AGG | - | chr5_4:25334243-25334262 | None:intergenic | 25.0% |
| ! | AAAATGGAAATAAACTACTC+AGG | + | chr5_4:25334261-25334280 | Msa0845920:intron | 25.0% |
| ! | ACTTATTTCCTAGAATAAGA+GGG | - | chr5_4:25334312-25334331 | None:intergenic | 25.0% |
| ! | TACTTATTTCCTAGAATAAG+AGG | - | chr5_4:25334313-25334332 | None:intergenic | 25.0% |
| ! | TATTTCAATTTCCCTATTTG+TGG | + | chr5_4:25334848-25334867 | Msa0845920:intron | 25.0% |
| ! | TTGATAAAGGAAGATATCAA+AGG | - | chr5_4:25335043-25335062 | None:intergenic | 25.0% |
| ! | GAAATCTCAAATATTTCCTT+GGG | - | chr5_4:25335220-25335239 | None:intergenic | 25.0% |
| ! | ACTATTAAACAAAACTCAGA+CGG | - | chr5_4:25335752-25335771 | None:intergenic | 25.0% |
| ! | TAAAATCCAGATTCCAAATT+CGG | - | chr5_4:25335909-25335928 | None:intergenic | 25.0% |
| ! | AATAAAAAACAGGAAGGTAA+AGG | - | chr5_4:25336151-25336170 | None:intergenic | 25.0% |
| ! | ATACCAAAATTGGTATTCAA+GGG | - | chr5_4:25336489-25336508 | None:intergenic | 25.0% |
| ! | TATACCAAAATTGGTATTCA+AGG | - | chr5_4:25336490-25336509 | None:intergenic | 25.0% |
| !! | CAACCTTTTTATACCAAAAT+TGG | - | chr5_4:25336499-25336518 | None:intergenic | 25.0% |
| !!! | AAAAGGTTGATTTTCAAAGA+AGG | + | chr5_4:25336510-25336529 | Msa0845920:intron | 25.0% |
| !!! | ATTTGTATCCTTTTTGGTTA+GGG | + | chr5_4:25336578-25336597 | Msa0845920:intron | 25.0% |
| ! | GAAAACAACTAGAAATAACT+TGG | + | chr5_4:25336719-25336738 | Msa0845920:intron | 25.0% |
| ! | AAAATCTCTTGGAGAATATT+TGG | - | chr5_4:25336956-25336975 | None:intergenic | 25.0% |
| !!! | ATGATCATTCTAGAATAACA+TGG | - | chr5_4:25337104-25337123 | None:intergenic | 25.0% |
| !! | TCTAGAATAAAAAATGTCAC+TGG | - | chr5_4:25337153-25337172 | None:intergenic | 25.0% |
| !!! | GTGACATTTTTTATTCTAGA+TGG | + | chr5_4:25337153-25337172 | Msa0845920:intron | 25.0% |
| ! | TCACTATGAATCATTGAAAA+AGG | + | chr5_4:25337186-25337205 | Msa0845920:intron | 25.0% |
| ! | AAAATTGACAAACTTCACAT+TGG | + | chr5_4:25337259-25337278 | Msa0845920:intron | 25.0% |
| !!! | AAAGTATTGGATAGTTGATT+CGG | - | chr5_4:25337778-25337797 | None:intergenic | 25.0% |
| !! | TCAATTTGCTCTTGATTAAA+TGG | + | chr5_4:25337909-25337928 | Msa0845920:intron | 25.0% |
| !!! | ATGATTTTTTCTTCTTCAAC+CGG | + | chr5_4:25338096-25338115 | Msa0845920:intron | 25.0% |
| !!! | AGAATTTTCAAGTTCTTGAT+GGG | - | chr5_4:25338320-25338339 | None:intergenic | 25.0% |
| !!! | AAGAATTTTCAAGTTCTTGA+TGG | - | chr5_4:25338321-25338340 | None:intergenic | 25.0% |
| ! | AATTCCATGACAAATGAAAT+AGG | - | chr5_4:25338596-25338615 | None:intergenic | 25.0% |
| ! | ATATTCTCTGAATTTCTACA+TGG | - | chr5_4:25338950-25338969 | None:intergenic | 25.0% |
| !! | TTTGGAATAAAAGAGTTACA+AGG | + | chr5_4:25334128-25334147 | Msa0845920:intron | 25.0% |
| ! | AGTTACAAGGTTTAAATAGA+GGG | + | chr5_4:25334141-25334160 | Msa0845920:intron | 25.0% |
| ! | AAAATAACTCCTCATAAACA+TGG | + | chr5_4:25334231-25334250 | Msa0845920:intron | 25.0% |
| !! | TTTTATTCTCCATGTTTATG+AGG | - | chr5_4:25334243-25334262 | None:intergenic | 25.0% |
| ! | AAAATGGAAATAAACTACTC+AGG | + | chr5_4:25334261-25334280 | Msa0845920:intron | 25.0% |
| ! | ACTTATTTCCTAGAATAAGA+GGG | - | chr5_4:25334312-25334331 | None:intergenic | 25.0% |
| ! | TACTTATTTCCTAGAATAAG+AGG | - | chr5_4:25334313-25334332 | None:intergenic | 25.0% |
| ! | GTCAAAATTCAACTACATTA+GGG | + | chr5_4:25339619-25339638 | Msa0845920:CDS | 25.0% |
| !! | TATTATTTCTTTCTGATCCA+AGG | - | chr5_4:25339698-25339717 | None:intergenic | 25.0% |
| ! | AACTCTTTGCAATTTCATTA+GGG | - | chr5_4:25339758-25339777 | None:intergenic | 25.0% |
| ! | AAATTGCAAAGAGTTCTATA+TGG | + | chr5_4:25339763-25339782 | Msa0845920:CDS | 25.0% |
| ! | TAACTCTAAGGAAGAATCAT+TGG | - | chr5_4:25332610-25332629 | None:intergenic | 30.0% |
| AAGGAATCTTCATGAAGAAA+AGG | - | chr5_4:25332645-25332664 | None:intergenic | 30.0% | |
| TGAATAAGGACTATGATCAA+AGG | - | chr5_4:25332664-25332683 | None:intergenic | 30.0% | |
| TTGGAGAATTTACTTCAGAT+GGG | - | chr5_4:25332698-25332717 | None:intergenic | 30.0% | |
| ACATGATGCAAAGAGATATA+AGG | + | chr5_4:25332722-25332741 | Msa0845920:CDS | 30.0% | |
| TAAATAGAACCAATATGGCA+TGG | - | chr5_4:25332762-25332781 | None:intergenic | 30.0% | |
| !! | GCCATATTGGTTCTATTTAT+TGG | + | chr5_4:25332763-25332782 | Msa0845920:intron | 30.0% |
| ! | ATTGCTTCTAGTTAAGACTT+AGG | + | chr5_4:25332898-25332917 | Msa0845920:intron | 30.0% |
| ATAGTGCACATTGCAAAAAT+TGG | - | chr5_4:25332960-25332979 | None:intergenic | 30.0% | |
| !! | CTTGGACATGTATTTTGAAA+CGG | + | chr5_4:25333164-25333183 | Msa0845920:intron | 30.0% |
| TGAAAAAAATACAAAGGGGT+TGG | + | chr5_4:25333245-25333264 | Msa0845920:intron | 30.0% | |
| !! | TTGGTTTTCATGATGATAGA+TGG | + | chr5_4:25333264-25333283 | Msa0845920:intron | 30.0% |
| ! | TGAATGAACTTTTATCCAGA+AGG | - | chr5_4:25333500-25333519 | None:intergenic | 30.0% |
| ! | ACGCATTTAATCTAAAGTGT+TGG | - | chr5_4:25333652-25333671 | None:intergenic | 30.0% |
| CGCAGTTCTCAAATTAATAT+CGG | + | chr5_4:25333722-25333741 | Msa0845920:intron | 30.0% | |
| AGTTCTCAAATTAATATCGG+TGG | + | chr5_4:25333725-25333744 | Msa0845920:intron | 30.0% | |
| GTTCTCAAATTAATATCGGT+GGG | + | chr5_4:25333726-25333745 | Msa0845920:intron | 30.0% | |
| AATCAGTATAATTGTGTTGC+AGG | + | chr5_4:25333811-25333830 | Msa0845920:intron | 30.0% | |
| ! | ATTTTGAATCCTCTGTAGAT+TGG | - | chr5_4:25333886-25333905 | None:intergenic | 30.0% |
| GAGTTACAAGGTTTAAATAG+AGG | + | chr5_4:25334140-25334159 | Msa0845920:intron | 30.0% | |
| GCTAATAATCAGACTTTATG+TGG | + | chr5_4:25334335-25334354 | Msa0845920:intron | 30.0% | |
| TTATCACACAACACCTTTAT+AGG | + | chr5_4:25334606-25334625 | Msa0845920:intron | 30.0% | |
| TGAGGGAATATGGTTAAAAA+GGG | - | chr5_4:25334664-25334683 | None:intergenic | 30.0% | |
| !! | AGGTTATTGCACTTTTGTTT+GGG | - | chr5_4:25334778-25334797 | None:intergenic | 30.0% |
| ! | AATATTCACTGATGCTGATT+GGG | - | chr5_4:25334832-25334851 | None:intergenic | 30.0% |
| AAATATTCACTGATGCTGAT+TGG | - | chr5_4:25334833-25334852 | None:intergenic | 30.0% | |
| TTTCCAGAAAACCACAAATA+GGG | - | chr5_4:25334862-25334881 | None:intergenic | 30.0% | |
| ! | TTTTCCAGAAAACCACAAAT+AGG | - | chr5_4:25334863-25334882 | None:intergenic | 30.0% |
| ATGCTGTATACAGGATTATT+AGG | - | chr5_4:25334917-25334936 | None:intergenic | 30.0% | |
| TAAAGGAAGATATCAAAGGT+TGG | - | chr5_4:25335039-25335058 | None:intergenic | 30.0% | |
| TGATATCTTCCTTTATCAAC+TGG | + | chr5_4:25335044-25335063 | Msa0845920:intron | 30.0% | |
| GGAAATCTCAAATATTTCCT+TGG | - | chr5_4:25335221-25335240 | None:intergenic | 30.0% | |
| !! | GTTGATGATATTGTTCTAAC+AGG | - | chr5_4:25335311-25335330 | None:intergenic | 30.0% |
| ! | TTGGTTTGATAGATTCACAA+AGG | - | chr5_4:25335429-25335448 | None:intergenic | 30.0% |
| ACTTGAAAAGAATGAGACTT+GGG | - | chr5_4:25335828-25335847 | None:intergenic | 30.0% | |
| AGAATGGAAGAAAGCTATAT+TGG | - | chr5_4:25335864-25335883 | None:intergenic | 30.0% | |
| AATATAGCTTTCTTCCATTC+TGG | + | chr5_4:25335863-25335882 | Msa0845920:intron | 30.0% | |
| ATATAGCTTTCTTCCATTCT+GGG | + | chr5_4:25335864-25335883 | Msa0845920:intron | 30.0% | |
| AAATTTGCAAATAGGATGAG+AGG | + | chr5_4:25335982-25336001 | Msa0845920:intron | 30.0% | |
| ! | TTGTCTTTTCTCAAGGAAAT+CGG | + | chr5_4:25336016-25336035 | Msa0845920:intron | 30.0% |
| ! | ACACATCAAAATTTTCACCA+TGG | + | chr5_4:25336410-25336429 | Msa0845920:intron | 30.0% |
| TACAGAAGAATACCAACTTT+GGG | - | chr5_4:25336458-25336477 | None:intergenic | 30.0% | |
| TTACAGAAGAATACCAACTT+TGG | - | chr5_4:25336459-25336478 | None:intergenic | 30.0% | |
| TACCAAAATTGGTATTCAAG+GGG | - | chr5_4:25336488-25336507 | None:intergenic | 30.0% | |
| !!! | CATTTGTATCCTTTTTGGTT+AGG | + | chr5_4:25336577-25336596 | Msa0845920:intron | 30.0% |
| !!! | TTTGTATCCTTTTTGGTTAG+GGG | + | chr5_4:25336579-25336598 | Msa0845920:intron | 30.0% |
| CAACTAGAAATAACTTGGTA+TGG | + | chr5_4:25336724-25336743 | Msa0845920:intron | 30.0% | |
| AAATAACTTGGTATGGAGTT+TGG | + | chr5_4:25336731-25336750 | Msa0845920:intron | 30.0% | |
| !! | GAGTTTGGAATTTTAGTACA+CGG | + | chr5_4:25336746-25336765 | Msa0845920:intron | 30.0% |
| !! | AGTTTGGAATTTTAGTACAC+GGG | + | chr5_4:25336747-25336766 | Msa0845920:intron | 30.0% |
| ! | ACATGTTCCGAAATTCTTTT+GGG | - | chr5_4:25336818-25336837 | None:intergenic | 30.0% |
| ATGAAAGAAAAGTCTGAACT+TGG | - | chr5_4:25337072-25337091 | None:intergenic | 30.0% | |
| ! | GTTCAGACTTTTCTTTCATT+AGG | + | chr5_4:25337073-25337092 | Msa0845920:intron | 30.0% |
| AATGATTCATAGTGATGTGT+GGG | - | chr5_4:25337181-25337200 | None:intergenic | 30.0% | |
| AATCATTGAAAAAGGATGAG+AGG | + | chr5_4:25337194-25337213 | Msa0845920:intron | 30.0% | |
| ACTTCACATTGGAAAAACTT+AGG | + | chr5_4:25337270-25337289 | Msa0845920:intron | 30.0% | |
| ! | TTCTGAAGATACATGAAACT+TGG | + | chr5_4:25337324-25337343 | Msa0845920:intron | 30.0% |
| TCTGAAGATACATGAAACTT+GGG | + | chr5_4:25337325-25337344 | Msa0845920:intron | 30.0% | |
| ! | AGGATAGTGTCATTATGTTA+TGG | - | chr5_4:25337368-25337387 | None:intergenic | 30.0% |
| ! | ATGACACTATCCTTATTTGA+CGG | + | chr5_4:25337375-25337394 | Msa0845920:intron | 30.0% |
| AGCAAATTGCAATCTAAGTT+TGG | + | chr5_4:25337588-25337607 | Msa0845920:intron | 30.0% | |
| TGGACTATCTGTTAAAATTG+CGG | - | chr5_4:25337694-25337713 | None:intergenic | 30.0% | |
| !! | AAGTATTGGATAGTTGATTC+GGG | - | chr5_4:25337777-25337796 | None:intergenic | 30.0% |
| !! | ACTGCTTTTATTGCTAAAAC+TGG | - | chr5_4:25337807-25337826 | None:intergenic | 30.0% |
| ! | ACATTTGTGAGAAGATCTTT+TGG | + | chr5_4:25337880-25337899 | Msa0845920:intron | 30.0% |
| TTGATTAAATGGTGTGGATT+GGG | + | chr5_4:25337920-25337939 | Msa0845920:intron | 30.0% | |
| GGTTGAAGAAGAAAAAATCA+TGG | - | chr5_4:25338097-25338116 | None:intergenic | 30.0% | |
| !!! | GAATTTTCAAGTTCTTGATG+GGG | - | chr5_4:25338319-25338338 | None:intergenic | 30.0% |
| AACAATCTCCTTGTATTTCT+TGG | + | chr5_4:25338349-25338368 | Msa0845920:intron | 30.0% | |
| ATATGTTTGAAGAACACAAC+TGG | - | chr5_4:25338391-25338410 | None:intergenic | 30.0% | |
| ! | AAATTTCTTGCTGTATAGCA+CGG | - | chr5_4:25338570-25338589 | None:intergenic | 30.0% |
| ! | ATCTTCCAATTTTTGTAGGT+TGG | + | chr5_4:25338647-25338666 | Msa0845920:intron | 30.0% |
| GAGTTACAAGGTTTAAATAG+AGG | + | chr5_4:25334140-25334159 | Msa0845920:intron | 30.0% | |
| GCTAATAATCAGACTTTATG+TGG | + | chr5_4:25334335-25334354 | Msa0845920:intron | 30.0% | |
| TGTAGTTGTTATAGTAACTG+TGG | - | chr5_4:25339230-25339249 | None:intergenic | 30.0% | |
| TATCCCAATATAGCATACTA+TGG | + | chr5_4:25339543-25339562 | Msa0845920:CDS | 30.0% | |
| ATAGATTGTACATTCCATGA+TGG | - | chr5_4:25339582-25339601 | None:intergenic | 30.0% | |
| GGTCAAAATTCAACTACATT+AGG | + | chr5_4:25339618-25339637 | Msa0845920:CDS | 30.0% | |
| GAACTCTTTGCAATTTCATT+AGG | - | chr5_4:25339759-25339778 | None:intergenic | 30.0% | |
| TGTTCTCCCAAAAAGCTTTA+TGG | - | chr5_4:25332556-25332575 | None:intergenic | 35.0% | |
| TCTTCCTTAGAGTTAGAGTT+TGG | + | chr5_4:25332615-25332634 | Msa0845920:CDS | 35.0% | |
| AGAACCAAACTCTAACTCTA+AGG | - | chr5_4:25332622-25332641 | None:intergenic | 35.0% | |
| TGGAGAATTTACTTCAGATG+GGG | - | chr5_4:25332697-25332716 | None:intergenic | 35.0% | |
| GTTGGAGAATTTACTTCAGA+TGG | - | chr5_4:25332699-25332718 | None:intergenic | 35.0% | |
| !!! | GGACATGTATTTTAAAACGG+AGG | - | chr5_4:25332939-25332958 | None:intergenic | 35.0% |
| !!! | GACATGTATTTTGAAACGGA+GGG | + | chr5_4:25333168-25333187 | Msa0845920:intron | 35.0% |
| TATATGTATCTGAGTCGTGT+CGG | - | chr5_4:25333684-25333703 | None:intergenic | 35.0% | |
| !! | ATGAGGTATTGACATAGACA+CGG | - | chr5_4:25333769-25333788 | None:intergenic | 35.0% |
| AGAACTCATATCAGTTCAAG+AGG | + | chr5_4:25333847-25333866 | Msa0845920:intron | 35.0% | |
| AGAGAAATCTCCAATGAAAC+CGG | + | chr5_4:25334012-25334031 | Msa0845920:intron | 35.0% | |
| ACAATTATGTCCGGTTTCAT+TGG | - | chr5_4:25334025-25334044 | None:intergenic | 35.0% | |
| TACAAGGTTTAAATAGAGGG+AGG | + | chr5_4:25334144-25334163 | Msa0845920:intron | 35.0% | |
| ! | TTTTCTGTTTCCTAGACTGA+GGG | - | chr5_4:25334183-25334202 | None:intergenic | 35.0% |
| AATAAACTACTCAGGAGTCA+AGG | + | chr5_4:25334269-25334288 | Msa0845920:intron | 35.0% | |
| ! | AGATTGTCAAACGTTTTCCT+TGG | + | chr5_4:25334420-25334439 | Msa0845920:intron | 35.0% |
| !! | AAAAGGGTGCTTCATGAAAT+TGG | - | chr5_4:25334648-25334667 | None:intergenic | 35.0% |
| GTGAGGGAATATGGTTAAAA+AGG | - | chr5_4:25334665-25334684 | None:intergenic | 35.0% | |
| ! | AAGGTATTTGTGAGGGAATA+TGG | - | chr5_4:25334674-25334693 | None:intergenic | 35.0% |
| !! | TTGAGACAGAGCTCTAAATT+CGG | + | chr5_4:25334692-25334711 | Msa0845920:intron | 35.0% |
| !! | GGTTATTGCACTTTTGTTTG+GGG | - | chr5_4:25334777-25334796 | None:intergenic | 35.0% |
| ! | CAGGTTATTGCACTTTTGTT+TGG | - | chr5_4:25334779-25334798 | None:intergenic | 35.0% |
| ! | TTTCCCTATTTGTGGTTTTC+TGG | + | chr5_4:25334856-25334875 | Msa0845920:intron | 35.0% |
| AGGTATTTGAAAATGACACC+AGG | - | chr5_4:25334897-25334916 | None:intergenic | 35.0% | |
| AACATATGGATGCTGTATAC+AGG | - | chr5_4:25334926-25334945 | None:intergenic | 35.0% | |
| CTCACTGCAAAACTAATATC+TGG | + | chr5_4:25334981-25335000 | Msa0845920:intron | 35.0% | |
| !! | ATCTAGGACGTATTTTCGTT+GGG | + | chr5_4:25335157-25335176 | Msa0845920:intron | 35.0% |
| TCTCAAATATTTCCTTGGGA+TGG | - | chr5_4:25335216-25335235 | None:intergenic | 35.0% | |
| ! | GAGTTTGAGATCAAAGACTT+GGG | - | chr5_4:25335242-25335261 | None:intergenic | 35.0% |
| ! | AGAGTTTGAGATCAAAGACT+TGG | - | chr5_4:25335243-25335262 | None:intergenic | 35.0% |
| GTCTTTGATCTCAAACTCTT+TGG | + | chr5_4:25335244-25335263 | Msa0845920:intron | 35.0% | |
| ACAAAGGTGGTAAAGAAGTT+TGG | - | chr5_4:25335413-25335432 | None:intergenic | 35.0% | |
| GTTTGATAGATTCACAAAGG+TGG | - | chr5_4:25335426-25335445 | None:intergenic | 35.0% | |
| AATCTATCAAACCAAGCTCT+AGG | + | chr5_4:25335434-25335453 | Msa0845920:intron | 35.0% | |
| ! | TTTGCAGACTTTGTTTGCAT+TGG | + | chr5_4:25335490-25335509 | Msa0845920:intron | 35.0% |
| TCTAGAAGAGGAAGTTTACA+TGG | - | chr5_4:25335543-25335562 | None:intergenic | 35.0% | |
| TTCTAGATCGCCATTTAAGA+AGG | + | chr5_4:25335556-25335575 | Msa0845920:intron | 35.0% | |
| GTGAAGAATGCCTTCTTAAA+TGG | - | chr5_4:25335569-25335588 | None:intergenic | 35.0% | |
| CACTTGAAAAGAATGAGACT+TGG | - | chr5_4:25335829-25335848 | None:intergenic | 35.0% | |
| TTCAATCTCGAAATTCGAGT+TGG | + | chr5_4:25336096-25336115 | Msa0845920:intron | 35.0% | |
| AGGAGGAATAAAAAACAGGA+AGG | - | chr5_4:25336157-25336176 | None:intergenic | 35.0% | |
| CACTAGGAGGAATAAAAAAC+AGG | - | chr5_4:25336161-25336180 | None:intergenic | 35.0% | |
| TAGGATCATTTGACACGATT+GGG | + | chr5_4:25336365-25336384 | Msa0845920:intron | 35.0% | |
| !! | ACTTTGGGATATTGAAGTCT+TGG | - | chr5_4:25336443-25336462 | None:intergenic | 35.0% |
| AGACTTCAATATCCCAAAGT+TGG | + | chr5_4:25336443-25336462 | Msa0845920:intron | 35.0% | |
| CTCTCAAGTGCATATTTGTA+GGG | - | chr5_4:25336609-25336628 | None:intergenic | 35.0% | |
| GAACAACCAAATACTTTGAC+CGG | + | chr5_4:25336670-25336689 | Msa0845920:intron | 35.0% | |
| ! | CATGTTCCGAAATTCTTTTG+GGG | - | chr5_4:25336817-25336836 | None:intergenic | 35.0% |
| ! | CACATGTTCCGAAATTCTTT+TGG | - | chr5_4:25336819-25336838 | None:intergenic | 35.0% |
| AAAGAATTTCGGAACATGTG+TGG | + | chr5_4:25336819-25336838 | Msa0845920:intron | 35.0% | |
| GAGAATATTTGGACAGTCAT+GGG | - | chr5_4:25336945-25336964 | None:intergenic | 35.0% | |
| TTGGAACTGAGTTTGAATCA+TGG | + | chr5_4:25337023-25337042 | Msa0845920:intron | 35.0% | |
| !! | TAGATGGTTTGTGTTGTTTG+TGG | - | chr5_4:25337127-25337146 | None:intergenic | 35.0% |
| AAAATGTCACTGGATCTAGA+TGG | - | chr5_4:25337143-25337162 | None:intergenic | 35.0% | |
| ATGATTCATAGTGATGTGTG+GGG | - | chr5_4:25337180-25337199 | None:intergenic | 35.0% | |
| CAATGATTCATAGTGATGTG+TGG | - | chr5_4:25337182-25337201 | None:intergenic | 35.0% | |
| ! | AAAGGATGAGAGGCTTTATA+AGG | + | chr5_4:25337204-25337223 | Msa0845920:intron | 35.0% |
| ! | TGACACTATCCTTATTTGAC+GGG | + | chr5_4:25337376-25337395 | Msa0845920:intron | 35.0% |
| TGAATTTCAGACCTTGGATT+CGG | - | chr5_4:25337508-25337527 | None:intergenic | 35.0% | |
| TCTATGTGAATTTCAGACCT+TGG | - | chr5_4:25337514-25337533 | None:intergenic | 35.0% | |
| CTATCTGTTAAAATTGCGGA+TGG | - | chr5_4:25337690-25337709 | None:intergenic | 35.0% | |
| ACAGATAGTCCATCATAACA+TGG | + | chr5_4:25337702-25337721 | Msa0845920:intron | 35.0% | |
| CATTACAGTCCATGTTATGA+TGG | - | chr5_4:25337714-25337733 | None:intergenic | 35.0% | |
| ! | CATAACATGGACTGTAATGA+TGG | + | chr5_4:25337715-25337734 | Msa0845920:intron | 35.0% |
| ! | AAACTGGACGTCAAAAGTAT+TGG | - | chr5_4:25337791-25337810 | None:intergenic | 35.0% |
| GTTGCATCATTAGCACATAA+AGG | - | chr5_4:25337840-25337859 | None:intergenic | 35.0% | |
| ATGTGCTAATGATGCAACTT+TGG | + | chr5_4:25337842-25337861 | Msa0845920:intron | 35.0% | |
| ! | TTTGTGAGAAGATCTTTTGG+AGG | + | chr5_4:25337883-25337902 | Msa0845920:intron | 35.0% |
| ! | TTGTGAGAAGATCTTTTGGA+GGG | + | chr5_4:25337884-25337903 | Msa0845920:intron | 35.0% |
| TTGCTCTTGATTAAATGGTG+TGG | + | chr5_4:25337914-25337933 | Msa0845920:intron | 35.0% | |
| CTTGATTAAATGGTGTGGAT+TGG | + | chr5_4:25337919-25337938 | Msa0845920:intron | 35.0% | |
| ! | TGATTAAATGGTGTGGATTG+GGG | + | chr5_4:25337921-25337940 | Msa0845920:intron | 35.0% |
| !! | TTTTGAAGGTTTCCAATCAG+CGG | + | chr5_4:25338010-25338029 | Msa0845920:intron | 35.0% |
| TATCTTCCAGCATGTTTCAT+TGG | + | chr5_4:25338043-25338062 | Msa0845920:intron | 35.0% | |
| !! | AGTATTCTCTGAAGTTCGTA+GGG | - | chr5_4:25338228-25338247 | None:intergenic | 35.0% |
| !! | AAGTATTCTCTGAAGTTCGT+AGG | - | chr5_4:25338229-25338248 | None:intergenic | 35.0% |
| GAGAATACTTCTCTGATACT+TGG | + | chr5_4:25338239-25338258 | Msa0845920:intron | 35.0% | |
| TACTTCTCTGATACTTGGTA+AGG | + | chr5_4:25338244-25338263 | Msa0845920:intron | 35.0% | |
| ACTTCTCTGATACTTGGTAA+GGG | + | chr5_4:25338245-25338264 | Msa0845920:intron | 35.0% | |
| AAAAACCTAGATGAAGTGAG+AGG | - | chr5_4:25338290-25338309 | None:intergenic | 35.0% | |
| !! | TGCTGATTCCAAGAAATACA+AGG | - | chr5_4:25338360-25338379 | None:intergenic | 35.0% |
| TTGTATTTCTTGGAATCAGC+AGG | + | chr5_4:25338359-25338378 | Msa0845920:intron | 35.0% | |
| TGTATTTCTTGGAATCAGCA+GGG | + | chr5_4:25338360-25338379 | Msa0845920:intron | 35.0% | |
| ! | TATCAAGTTGTTGCCATTGA+CGG | + | chr5_4:25338408-25338427 | Msa0845920:intron | 35.0% |
| ATTTGTCTCGATCTCAAAGA+TGG | + | chr5_4:25338487-25338506 | Msa0845920:intron | 35.0% | |
| ! | TGAAATTTGGAGTGATGCAA+AGG | - | chr5_4:25338543-25338562 | None:intergenic | 35.0% |
| ATAGCACGGCAAATGAAATT+TGG | - | chr5_4:25338556-25338575 | None:intergenic | 35.0% | |
| TTCGCCTATTTCATTTGTCA+TGG | + | chr5_4:25338589-25338608 | Msa0845920:intron | 35.0% | |
| AGAACAACATGGTTATGTCA+TGG | - | chr5_4:25338625-25338644 | None:intergenic | 35.0% | |
| ! | CTCGATCTTCCAATTTTTGT+AGG | + | chr5_4:25338643-25338662 | Msa0845920:intron | 35.0% |
| AGGATCCAACCTACAAAAAT+TGG | - | chr5_4:25338655-25338674 | None:intergenic | 35.0% | |
| AAAAGTTGCACCAAAAACAG+AGG | - | chr5_4:25338675-25338694 | None:intergenic | 35.0% | |
| !!! | TTTTGGTGCAACTTTTTCAC+CGG | + | chr5_4:25338679-25338698 | Msa0845920:intron | 35.0% |
| GGAAAGGATGAATATCTTAC+CGG | - | chr5_4:25338701-25338720 | None:intergenic | 35.0% | |
| !! | TCAGTTTTGATGTTCATCAG+TGG | - | chr5_4:25338728-25338747 | None:intergenic | 35.0% |
| TCAAAACTGATTGTGACCAT+TGG | + | chr5_4:25338738-25338757 | Msa0845920:intron | 35.0% | |
| TTACAGGACACAAACTGAAT+GGG | - | chr5_4:25338775-25338794 | None:intergenic | 35.0% | |
| ATTACAGGACACAAACTGAA+TGG | - | chr5_4:25338776-25338795 | None:intergenic | 35.0% | |
| ATTCAGTTTGTGTCCTGTAA+TGG | + | chr5_4:25338775-25338794 | Msa0845920:intron | 35.0% | |
| TTCAGTTTGTGTCCTGTAAT+GGG | + | chr5_4:25338776-25338795 | Msa0845920:intron | 35.0% | |
| TACAAGGTTTAAATAGAGGG+AGG | + | chr5_4:25334144-25334163 | Msa0845920:intron | 35.0% | |
| ! | TTTTCTGTTTCCTAGACTGA+GGG | - | chr5_4:25334183-25334202 | None:intergenic | 35.0% |
| AATAAACTACTCAGGAGTCA+AGG | + | chr5_4:25334269-25334288 | Msa0845920:intron | 35.0% | |
| ACCTACAATCATATTTCTCG+TGG | - | chr5_4:25339313-25339332 | None:intergenic | 35.0% | |
| AGAAATATGATTGTAGGTGC+TGG | + | chr5_4:25339315-25339334 | Msa0845920:CDS | 35.0% | |
| AGTAGTACTATGCAATCCAT+TGG | - | chr5_4:25339367-25339386 | None:intergenic | 35.0% | |
| AGTACTACTATCTTGACCTT+TGG | + | chr5_4:25339378-25339397 | Msa0845920:CDS | 35.0% | |
| AGTAGAAGAATCTGATCCAA+AGG | - | chr5_4:25339397-25339416 | None:intergenic | 35.0% | |
| CTTGACAAGAAAGTGAATGT+TGG | + | chr5_4:25339432-25339451 | Msa0845920:CDS | 35.0% | |
| ATATTGGGATAGAATGACAC+AGG | - | chr5_4:25339534-25339553 | None:intergenic | 35.0% | |
| CCACCATAGTATGCTATATT+GGG | - | chr5_4:25339549-25339568 | None:intergenic | 35.0% | |
| ACCACCATAGTATGCTATAT+TGG | - | chr5_4:25339550-25339569 | None:intergenic | 35.0% | |
| TTAGGGAAACATTCAAGAGA+TGG | + | chr5_4:25339636-25339655 | Msa0845920:CDS | 35.0% | |
| TAGGGAAACATTCAAGAGAT+GGG | + | chr5_4:25339637-25339656 | Msa0845920:CDS | 35.0% | |
| ! | TGATCCAAGGTTTTCTTTCT+CGG | - | chr5_4:25339685-25339704 | None:intergenic | 35.0% |
| TCATCAATTCTCAGTGTCTT+AGG | - | chr5_4:25339735-25339754 | None:intergenic | 35.0% | |
| AGTTCTATATGGTCAACACT+AGG | + | chr5_4:25339774-25339793 | Msa0845920:CDS | 35.0% | |
| TCAACACTAGGAATCAAGAA+TGG | + | chr5_4:25339786-25339805 | Msa0845920:CDS | 35.0% | |
| CAACACTAGGAATCAAGAAT+GGG | + | chr5_4:25339787-25339806 | Msa0845920:CDS | 35.0% | |
| AACACTAGGAATCAAGAATG+GGG | + | chr5_4:25339788-25339807 | Msa0845920:CDS | 35.0% | |
| TTTCATGGGATTTGCATCTA+AGG | + | chr5_4:25339818-25339837 | Msa0845920:CDS | 35.0% | |
| TTCATGGGATTTGCATCTAA+GGG | + | chr5_4:25339819-25339838 | Msa0845920:CDS | 35.0% | |
| !! | ATTAGCTTGCAAAACTGATG+AGG | - | chr5_4:25339871-25339890 | None:intergenic | 35.0% |
| GGGGAACATGAAGATGAATA+AGG | - | chr5_4:25332678-25332697 | None:intergenic | 40.0% | |
| CTCTTTGCATCATGTTCAGT+TGG | - | chr5_4:25332717-25332736 | None:intergenic | 40.0% | |
| ! | GTGCATTGACATATGTGAAG+TGG | + | chr5_4:25333137-25333156 | Msa0845920:intron | 40.0% |
| CATATGTGAAGTGGTTGACT+TGG | + | chr5_4:25333146-25333165 | Msa0845920:intron | 40.0% | |
| !!! | GGACATGTATTTTGAAACGG+AGG | + | chr5_4:25333167-25333186 | Msa0845920:intron | 40.0% |
| ! | CTTTTATCCAGAAGGACTTC+AGG | - | chr5_4:25333492-25333511 | None:intergenic | 40.0% |
| !! | GTGTTGGTGTTACATAGACA+TGG | - | chr5_4:25333636-25333655 | None:intergenic | 40.0% |
| !! | TGAGGTATTGACATAGACAC+GGG | - | chr5_4:25333768-25333787 | None:intergenic | 40.0% |
| TTGTGTTGCAGGAAACATCA+TGG | + | chr5_4:25333822-25333841 | Msa0845920:intron | 40.0% | |
| CATATCAGTTCAAGAGGATG+AGG | + | chr5_4:25333853-25333872 | Msa0845920:intron | 40.0% | |
| ATCCTCTGTAGATTGGAATG+AGG | - | chr5_4:25333879-25333898 | None:intergenic | 40.0% | |
| GAAGTTTCTATTTCGGACGA+GGG | - | chr5_4:25333947-25333966 | None:intergenic | 40.0% | |
| AGAAGTTTCTATTTCGGACG+AGG | - | chr5_4:25333948-25333967 | None:intergenic | 40.0% | |
| ATGCATTTGCATCTTGGACA+GGG | - | chr5_4:25334049-25334068 | None:intergenic | 40.0% | |
| AAGGTTTAAATAGAGGGAGG+AGG | + | chr5_4:25334147-25334166 | Msa0845920:intron | 40.0% | |
| ! | CTTTTCTGTTTCCTAGACTG+AGG | - | chr5_4:25334184-25334203 | None:intergenic | 40.0% |
| TCCTAGAATAAGAGGGATCA+GGG | - | chr5_4:25334305-25334324 | None:intergenic | 40.0% | |
| TTCCTAGAATAAGAGGGATC+AGG | - | chr5_4:25334306-25334325 | None:intergenic | 40.0% | |
| ACATCTACAACCTAGCTTGA+GGG | - | chr5_4:25334377-25334396 | None:intergenic | 40.0% | |
| AACATCTACAACCTAGCTTG+AGG | - | chr5_4:25334378-25334397 | None:intergenic | 40.0% | |
| GACAATCTTACATCCAAGCT+AGG | - | chr5_4:25334408-25334427 | None:intergenic | 40.0% | |
| TGGATTCTTAGCAATGCTGA+TGG | + | chr5_4:25334575-25334594 | Msa0845920:intron | 40.0% | |
| CACAACACCTTTATAGGAAC+AGG | + | chr5_4:25334612-25334631 | Msa0845920:intron | 40.0% | |
| CCTCAATCCTGTTCCTATAA+AGG | - | chr5_4:25334622-25334641 | None:intergenic | 40.0% | |
| CCTTTATAGGAACAGGATTG+AGG | + | chr5_4:25334619-25334638 | Msa0845920:intron | 40.0% | |
| ! | CTGTCTCAAGGTATTTGTGA+GGG | - | chr5_4:25334681-25334700 | None:intergenic | 40.0% |
| ! | TCTGTCTCAAGGTATTTGTG+AGG | - | chr5_4:25334682-25334701 | None:intergenic | 40.0% |
| ! | GAATTTAGAGCTCTGTCTCA+AGG | - | chr5_4:25334693-25334712 | None:intergenic | 40.0% |
| !! | CACTTTTGTTTGGGGAAACT+TGG | - | chr5_4:25334769-25334788 | None:intergenic | 40.0% |
| TTGAAAATGACACCAGGTCA+AGG | - | chr5_4:25334891-25334910 | None:intergenic | 40.0% | |
| AGCATCCATATGTTCTTCTG+TGG | + | chr5_4:25334932-25334951 | Msa0845920:intron | 40.0% | |
| GCATCCATATGTTCTTCTGT+GGG | + | chr5_4:25334933-25334952 | Msa0845920:intron | 40.0% | |
| ! | GGAAGATATCAAAGGTTGGT+TGG | - | chr5_4:25335035-25335054 | None:intergenic | 40.0% |
| !! | AATGGGACACCAGTTGATAA+AGG | - | chr5_4:25335056-25335075 | None:intergenic | 40.0% |
| AGCTAGGAACTCTAGACAAT+GGG | - | chr5_4:25335073-25335092 | None:intergenic | 40.0% | |
| AAGCTAGGAACTCTAGACAA+TGG | - | chr5_4:25335074-25335093 | None:intergenic | 40.0% | |
| CTAAAGGAGACAGGAATGAT+TGG | - | chr5_4:25335134-25335153 | None:intergenic | 40.0% | |
| CAATCATTCCTGTCTCCTTT+AGG | + | chr5_4:25335132-25335151 | Msa0845920:intron | 40.0% | |
| ATACGTCCTAGATCTCCTAA+AGG | - | chr5_4:25335150-25335169 | None:intergenic | 40.0% | |
| !! | GATCTAGGACGTATTTTCGT+TGG | + | chr5_4:25335156-25335175 | Msa0845920:intron | 40.0% |
| !! | TCGGTCGAAGAAAGGTATTT+CGG | - | chr5_4:25335186-25335205 | None:intergenic | 40.0% |
| CAAATATTTCCTTGGGATGG+AGG | - | chr5_4:25335213-25335232 | None:intergenic | 40.0% | |
| TGATCTCAAACTCTTTGGCT+AGG | + | chr5_4:25335249-25335268 | Msa0845920:intron | 40.0% | |
| TTATCAAGCAGTCATCGACA+GGG | - | chr5_4:25335358-25335377 | None:intergenic | 40.0% | |
| TTTATCAAGCAGTCATCGAC+AGG | - | chr5_4:25335359-25335378 | None:intergenic | 40.0% | |
| CTTAAATGGCGATCTAGAAG+AGG | - | chr5_4:25335555-25335574 | None:intergenic | 40.0% | |
| TTCACATCCATCTGATAGAG+AGG | + | chr5_4:25335584-25335603 | Msa0845920:intron | 40.0% | |
| CACTTGCCTCAAATCTTGAT+TGG | - | chr5_4:25335610-25335629 | None:intergenic | 40.0% | |
| TGGCAAAACTCAACACAGTT+CGG | - | chr5_4:25335643-25335662 | None:intergenic | 40.0% | |
| ! | CTCTTGATAGTCAATCCCAT+AGG | + | chr5_4:25335676-25335695 | Msa0845920:intron | 40.0% |
| AGGGGTTTACACAATCCTAT+GGG | - | chr5_4:25335694-25335713 | None:intergenic | 40.0% | |
| AAGGGGTTTACACAATCCTA+TGG | - | chr5_4:25335695-25335714 | None:intergenic | 40.0% | |
| CGGTAGCATCAACAGATTTA+AGG | - | chr5_4:25335732-25335751 | None:intergenic | 40.0% | |
| AAAATCCATTTGCATCCCAC+CGG | + | chr5_4:25335773-25335792 | Msa0845920:intron | 40.0% | |
| ! | GAGTTATCTGATTTGCCATC+AGG | - | chr5_4:25335806-25335825 | None:intergenic | 40.0% |
| CAAGATTGCTGACAAAAGCT+AGG | + | chr5_4:25335930-25335949 | Msa0845920:intron | 40.0% | |
| ! | AGAACGCTTGTCTTTTCTCA+AGG | + | chr5_4:25336009-25336028 | Msa0845920:intron | 40.0% |
| TCTATCGTCGAATTCAACAG+TGG | + | chr5_4:25336039-25336058 | Msa0845920:intron | 40.0% | |
| CTATCGTCGAATTCAACAGT+GGG | + | chr5_4:25336040-25336059 | Msa0845920:intron | 40.0% | |
| TCGAATTCAACAGTGGGAAT+AGG | + | chr5_4:25336046-25336065 | Msa0845920:intron | 40.0% | |
| TTCTGATACTGGCAGAATAG+TGG | + | chr5_4:25336261-25336280 | Msa0845920:intron | 40.0% | |
| GAGAGTTAGACAGTTCAGAT+TGG | + | chr5_4:25336287-25336306 | Msa0845920:intron | 40.0% | |
| ! | AGTTCAGATTGGTCAGACAT+GGG | + | chr5_4:25336298-25336317 | Msa0845920:intron | 40.0% |
| CTAGGATCATTTGACACGAT+TGG | + | chr5_4:25336364-25336383 | Msa0845920:intron | 40.0% | |
| !! | TTGACACGATTGGGTTAGTT+TGG | + | chr5_4:25336374-25336393 | Msa0845920:intron | 40.0% |
| !! | GGGTTAGTTTGGTTTACTTG+AGG | + | chr5_4:25336385-25336404 | Msa0845920:intron | 40.0% |
| ! | CTCCCCTTGAATACCAATTT+TGG | + | chr5_4:25336483-25336502 | Msa0845920:intron | 40.0% |
| GCTCTCAAGTGCATATTTGT+AGG | - | chr5_4:25336610-25336629 | None:intergenic | 40.0% | |
| AGCTAGTAAACTTGACCCAA+GGG | - | chr5_4:25336632-25336651 | None:intergenic | 40.0% | |
| AAGCTAGTAAACTTGACCCA+AGG | - | chr5_4:25336633-25336652 | None:intergenic | 40.0% | |
| !! | CAAGTTTACTAGCTTGCTGA+TGG | + | chr5_4:25336638-25336657 | Msa0845920:intron | 40.0% |
| ! | ACTCTTCCGGTCAAAGTATT+TGG | - | chr5_4:25336679-25336698 | None:intergenic | 40.0% |
| AAATACTTTGACCGGAAGAG+TGG | + | chr5_4:25336678-25336697 | Msa0845920:intron | 40.0% | |
| !! | TGGAATTTTAGTACACGGGA+AGG | + | chr5_4:25336751-25336770 | Msa0845920:intron | 40.0% |
| GCTTCACCCCAAAAGAATTT+CGG | + | chr5_4:25336808-25336827 | Msa0845920:intron | 40.0% | |
| TAAGAGACCTAGCAACTTCT+AGG | + | chr5_4:25336848-25336867 | Msa0845920:intron | 40.0% | |
| GACATATCCTAGAAGTTGCT+AGG | - | chr5_4:25336858-25336877 | None:intergenic | 40.0% | |
| TTGACACCCCACAACAAAAT+GGG | - | chr5_4:25336900-25336919 | None:intergenic | 40.0% | |
| GGAGAATATTTGGACAGTCA+TGG | - | chr5_4:25336946-25336965 | None:intergenic | 40.0% | |
| ATGTTATGGCACTATCGTCT+AGG | - | chr5_4:25337354-25337373 | None:intergenic | 40.0% | |
| ! | ACTATCCTTATTTGACGGGT+TGG | + | chr5_4:25337380-25337399 | Msa0845920:intron | 40.0% |
| GCATTGTGAGTTTGTCTTGT+AGG | + | chr5_4:25337420-25337439 | Msa0845920:intron | 40.0% | |
| TTGTGAGTTTGTCTTGTAGG+AGG | + | chr5_4:25337423-25337442 | Msa0845920:intron | 40.0% | |
| GAGGATAATCCGTTTGAAGA+AGG | + | chr5_4:25337442-25337461 | Msa0845920:intron | 40.0% | |
| AGGACTCTACCTTCTTCAAA+CGG | - | chr5_4:25337454-25337473 | None:intergenic | 40.0% | |
| AATTTCAGACCTTGGATTCG+GGG | - | chr5_4:25337506-25337525 | None:intergenic | 40.0% | |
| GAATTTCAGACCTTGGATTC+GGG | - | chr5_4:25337507-25337526 | None:intergenic | 40.0% | |
| AACTTTGGTACCATGTTGAG+AGG | + | chr5_4:25337857-25337876 | Msa0845920:intron | 40.0% | |
| TCACAAATGTCCTCTCAACA+TGG | - | chr5_4:25337870-25337889 | None:intergenic | 40.0% | |
| AATCATGTCTCAACCGAAGA+CGG | - | chr5_4:25337963-25337982 | None:intergenic | 40.0% | |
| TTTGAAGGTTTCCAATCAGC+GGG | + | chr5_4:25338011-25338030 | Msa0845920:intron | 40.0% | |
| GAAACATGCTGGAAGATACA+TGG | - | chr5_4:25338041-25338060 | None:intergenic | 40.0% | |
| ACCATCATTCCAATGACAAC+CGG | - | chr5_4:25338118-25338137 | None:intergenic | 40.0% | |
| ! | CTGATTTTCCATGGAAGCTA+TGG | + | chr5_4:25338163-25338182 | Msa0845920:intron | 40.0% |
| AGCAGGAAGAAAGTGATGAT+GGG | - | chr5_4:25338200-25338219 | None:intergenic | 40.0% | |
| AAGCAGGAAGAAAGTGATGA+TGG | - | chr5_4:25338201-25338220 | None:intergenic | 40.0% | |
| TCTGATACTTGGTAAGGGTT+TGG | + | chr5_4:25338250-25338269 | Msa0845920:intron | 40.0% | |
| ! | ATCAAGTTGTTGCCATTGAC+GGG | + | chr5_4:25338409-25338428 | Msa0845920:intron | 40.0% |
| TTGGAAGATCGAGAACAACA+TGG | - | chr5_4:25338636-25338655 | None:intergenic | 40.0% | |
| !! | TAGGTTGGATCCTCTGTTTT+TGG | + | chr5_4:25338662-25338681 | Msa0845920:intron | 40.0% |
| TTGATGTTCATCAGTGGCAA+AGG | - | chr5_4:25338722-25338741 | None:intergenic | 40.0% | |
| AAACTGATTGTGACCATTGG+AGG | + | chr5_4:25338741-25338760 | Msa0845920:intron | 40.0% | |
| TTCTGTAGCCATACCGTATT+TGG | + | chr5_4:25338895-25338914 | Msa0845920:intron | 40.0% | |
| TACCATGACCAAATACGGTA+TGG | - | chr5_4:25338906-25338925 | None:intergenic | 40.0% | |
| TACCGTATTTGGTCATGGTA+AGG | + | chr5_4:25338906-25338925 | Msa0845920:intron | 40.0% | |
| GTCCTTACCATGACCAAATA+CGG | - | chr5_4:25338911-25338930 | None:intergenic | 40.0% | |
| TATTTGGTCATGGTAAGGAC+CGG | + | chr5_4:25338911-25338930 | Msa0845920:intron | 40.0% | |
| ACATGGTATCAGTAGCAAAC+CGG | - | chr5_4:25338933-25338952 | None:intergenic | 40.0% | |
| AAGGTTTAAATAGAGGGAGG+AGG | + | chr5_4:25334147-25334166 | Msa0845920:intron | 40.0% | |
| ! | CTTTTCTGTTTCCTAGACTG+AGG | - | chr5_4:25334184-25334203 | None:intergenic | 40.0% |
| TCCTAGAATAAGAGGGATCA+GGG | - | chr5_4:25334305-25334324 | None:intergenic | 40.0% | |
| TTCCTAGAATAAGAGGGATC+AGG | - | chr5_4:25334306-25334325 | None:intergenic | 40.0% | |
| GCCACGAGAAATATGATTGT+AGG | + | chr5_4:25339309-25339328 | Msa0845920:CDS | 40.0% | |
| AACAAACTCAATGCAGCCAA+TGG | + | chr5_4:25339348-25339367 | Msa0845920:CDS | 40.0% | |
| ! | GTTTACCTCCACAGTTTTCT+TGG | + | chr5_4:25339490-25339509 | Msa0845920:CDS | 40.0% |
| ACACAGGATAACACATTGCA+GGG | - | chr5_4:25339518-25339537 | None:intergenic | 40.0% | |
| CCCAATATAGCATACTATGG+TGG | + | chr5_4:25339546-25339565 | Msa0845920:CDS | 40.0% | |
| AGCATACTATGGTGGTTGTT+TGG | + | chr5_4:25339554-25339573 | Msa0845920:CDS | 40.0% | |
| TCTATCTCGACACAATCTTG+CGG | + | chr5_4:25339597-25339616 | Msa0845920:CDS | 40.0% | |
| ! | AAGGTTTTCTTTCTCGGAGT+TGG | - | chr5_4:25339679-25339698 | None:intergenic | 40.0% |
| AACTCCGAGAAAGAAAACCT+TGG | + | chr5_4:25339678-25339697 | Msa0845920:CDS | 40.0% | |
| ACACTAGGAATCAAGAATGG+GGG | + | chr5_4:25339789-25339808 | Msa0845920:CDS | 40.0% | |
| TCATGGGATTTGCATCTAAG+GGG | + | chr5_4:25339820-25339839 | Msa0845920:CDS | 40.0% | |
| !! | CTAATCCTGTCGCTTTATCA+AGG | + | chr5_4:25339886-25339905 | Msa0845920:CDS | 40.0% |
| GTTCTTGTGCCATGCCATAT+TGG | + | chr5_4:25332750-25332769 | Msa0845920:intron | 45.0% | |
| !!! | GAGTTTTCGGGTTCTCAACA+AGG | - | chr5_4:25333925-25333944 | None:intergenic | 45.0% |
| ! | ATTTCGGACGAGGGAGTTTT+CGG | - | chr5_4:25333938-25333957 | None:intergenic | 45.0% |
| GGACAGGGAACAATTATGTC+CGG | - | chr5_4:25334034-25334053 | None:intergenic | 45.0% | |
| CATGCATTTGCATCTTGGAC+AGG | - | chr5_4:25334050-25334069 | None:intergenic | 45.0% | |
| CTGTCCAAGATGCAAATGCA+TGG | + | chr5_4:25334048-25334067 | Msa0845920:intron | 45.0% | |
| GTGTCCATGCATTTGCATCT+TGG | - | chr5_4:25334055-25334074 | None:intergenic | 45.0% | |
| TCCCTGATCCCTCTTATTCT+AGG | + | chr5_4:25334301-25334320 | Msa0845920:intron | 45.0% | |
| ATCTACAACCTAGCTTGAGG+GGG | - | chr5_4:25334375-25334394 | None:intergenic | 45.0% | |
| CATCTACAACCTAGCTTGAG+GGG | - | chr5_4:25334376-25334395 | None:intergenic | 45.0% | |
| GATGTTGAGCAATCCTAGCT+TGG | + | chr5_4:25334392-25334411 | Msa0845920:intron | 45.0% | |
| ACCTACAAGTCAACAGACTG+CGG | - | chr5_4:25334466-25334485 | None:intergenic | 45.0% | |
| TTTGTCCTGTCGTGATGAAC+TGG | + | chr5_4:25334555-25334574 | Msa0845920:intron | 45.0% | |
| AGAATCCAGTTCATCACGAC+AGG | - | chr5_4:25334563-25334582 | None:intergenic | 45.0% | |
| ATTCGGCTTCTGCTGAACTA+CGG | + | chr5_4:25334709-25334728 | Msa0845920:intron | 45.0% | |
| TTTGGGGAAACTTGGTCACT+TGG | - | chr5_4:25334761-25334780 | None:intergenic | 45.0% | |
| TGGAAAAACAAGCCTTGACC+TGG | + | chr5_4:25334876-25334895 | Msa0845920:intron | 45.0% | |
| CAGTCCCACAGAAGAACATA+TGG | - | chr5_4:25334940-25334959 | None:intergenic | 45.0% | |
| ATGGATGCAACTGTGAAGCT+AGG | - | chr5_4:25335089-25335108 | None:intergenic | 45.0% | |
| AGCTTCACAGTTGCATCCAT+AGG | + | chr5_4:25335089-25335108 | Msa0845920:intron | 45.0% | |
| GCTTCACAGTTGCATCCATA+GGG | + | chr5_4:25335090-25335109 | Msa0845920:intron | 45.0% | |
| CTTCACAGTTGCATCCATAG+GGG | + | chr5_4:25335091-25335110 | Msa0845920:intron | 45.0% | |
| CTAGATCTCCTAAAGGAGAC+AGG | - | chr5_4:25335143-25335162 | None:intergenic | 45.0% | |
| ! | CTGTCTCCTTTAGGAGATCT+AGG | + | chr5_4:25335141-25335160 | Msa0845920:intron | 45.0% |
| TCTCAAACTCTTTGGCTAGG+AGG | + | chr5_4:25335252-25335271 | Msa0845920:intron | 45.0% | |
| TAAAGCAGTCACCTAGAGCT+TGG | - | chr5_4:25335448-25335467 | None:intergenic | 45.0% | |
| ! | GACTTTGTTTGCATTGGCAG+AGG | + | chr5_4:25335496-25335515 | Msa0845920:intron | 45.0% |
| TTTACATGGAAATTCCCCCC+GGG | - | chr5_4:25335529-25335548 | None:intergenic | 45.0% | |
| GTTTACATGGAAATTCCCCC+CGG | - | chr5_4:25335530-25335549 | None:intergenic | 45.0% | |
| !! | TGATTGGCCTCTCTATCAGA+TGG | - | chr5_4:25335594-25335613 | None:intergenic | 45.0% |
| GAGAGGCCAATCAAGATTTG+AGG | + | chr5_4:25335601-25335620 | Msa0845920:intron | 45.0% | |
| ! | ACTGTGTTGAGTTTTGCCAC+AGG | + | chr5_4:25335644-25335663 | Msa0845920:intron | 45.0% |
| ! | AAGGCACGACTAGTTGCAAA+GGG | - | chr5_4:25335713-25335732 | None:intergenic | 45.0% |
| ! | TAAGGCACGACTAGTTGCAA+AGG | - | chr5_4:25335714-25335733 | None:intergenic | 45.0% |
| !! | TTTGCCATCAGGAAAGCATC+CGG | - | chr5_4:25335795-25335814 | None:intergenic | 45.0% |
| AGCTTTCTTCCATTCTGGGT+TGG | + | chr5_4:25335868-25335887 | Msa0845920:intron | 45.0% | |
| AAGCTCTTACCAACCCAGAA+TGG | - | chr5_4:25335880-25335899 | None:intergenic | 45.0% | |
| AGAGCTTCATGGACCGAATT+TGG | + | chr5_4:25335893-25335912 | Msa0845920:intron | 45.0% | |
| ! | CATGGACCGAATTTGGAATC+TGG | + | chr5_4:25335900-25335919 | Msa0845920:intron | 45.0% |
| CTGACAAAAGCTAGGTGATG+AGG | + | chr5_4:25335938-25335957 | Msa0845920:intron | 45.0% | |
| AGTTGGAATCAGAGCAGTCT+TGG | + | chr5_4:25336113-25336132 | Msa0845920:intron | 45.0% | |
| AGTTTCGTGTCTTCACTAGG+AGG | - | chr5_4:25336174-25336193 | None:intergenic | 45.0% | |
| GTGAGTTTCGTGTCTTCACT+AGG | - | chr5_4:25336177-25336196 | None:intergenic | 45.0% | |
| CGAAACTCACGTATTTCAGC+AGG | + | chr5_4:25336187-25336206 | Msa0845920:intron | 45.0% | |
| AGCAGGTTGTGTTGAAGTAG+AGG | + | chr5_4:25336204-25336223 | Msa0845920:intron | 45.0% | |
| GCAGGTTGTGTTGAAGTAGA+GGG | + | chr5_4:25336205-25336224 | Msa0845920:intron | 45.0% | |
| ! | GGAGGTTGTTGTTCTGATAC+TGG | + | chr5_4:25336250-25336269 | Msa0845920:intron | 45.0% |
| ! | CAGTTCAGATTGGTCAGACA+TGG | + | chr5_4:25336297-25336316 | Msa0845920:intron | 45.0% |
| TCAGACATGGGCAAAGTAGA+GGG | + | chr5_4:25336310-25336329 | Msa0845920:intron | 45.0% | |
| GAAGTCTTGGAGTCAATCCA+TGG | - | chr5_4:25336430-25336449 | None:intergenic | 45.0% | |
| GGGTATTCCCCTAACCAAAA+AGG | - | chr5_4:25336589-25336608 | None:intergenic | 45.0% | |
| AATATGCACTTGAGAGCCCT+TGG | + | chr5_4:25336613-25336632 | Msa0845920:intron | 45.0% | |
| ATATGCACTTGAGAGCCCTT+GGG | + | chr5_4:25336614-25336633 | Msa0845920:intron | 45.0% | |
| TCGTGTCTTATCCACTCTTC+CGG | - | chr5_4:25336692-25336711 | None:intergenic | 45.0% | |
| GTGGATAAGACACGAGTATG+AGG | + | chr5_4:25336697-25336716 | Msa0845920:intron | 45.0% | |
| TGACACCCCACAACAAAATG+GGG | - | chr5_4:25336899-25336918 | None:intergenic | 45.0% | |
| GTTGACACCCCACAACAAAA+TGG | - | chr5_4:25336901-25336920 | None:intergenic | 45.0% | |
| GTCAACCAACCCGTCAAATA+AGG | - | chr5_4:25337388-25337407 | None:intergenic | 45.0% | |
| ! | CTGTCTAAAGTAGCTGGTAC+AGG | - | chr5_4:25337663-25337682 | None:intergenic | 45.0% |
| ! | GGTTCACTGTCTAAAGTAGC+TGG | - | chr5_4:25337669-25337688 | None:intergenic | 45.0% |
| AGCAGTCTGATTTCCGTCTT+CGG | + | chr5_4:25337947-25337966 | Msa0845920:intron | 45.0% | |
| GAAACCTTCAAAACCCACGT+GGG | - | chr5_4:25338003-25338022 | None:intergenic | 45.0% | |
| TACATGGAAAACCCGCTGAT+TGG | - | chr5_4:25338025-25338044 | None:intergenic | 45.0% | |
| GACACACCAATGAAACATGC+TGG | - | chr5_4:25338052-25338071 | None:intergenic | 45.0% | |
| TGTGATCATTGCCAAAGGAC+TGG | - | chr5_4:25338074-25338093 | None:intergenic | 45.0% | |
| CATGGTGTGATCATTGCCAA+AGG | - | chr5_4:25338079-25338098 | None:intergenic | 45.0% | |
| CTTCTTCAACCGGTTGTCAT+TGG | + | chr5_4:25338106-25338125 | Msa0845920:intron | 45.0% | |
| ACCGGTTGTCATTGGAATGA+TGG | + | chr5_4:25338114-25338133 | Msa0845920:intron | 45.0% | |
| ! | TGGAATGATGGTGAACTCCT+CGG | + | chr5_4:25338126-25338145 | Msa0845920:intron | 45.0% |
| AAGTTCGTAGGGAAGAAAGC+AGG | - | chr5_4:25338217-25338236 | None:intergenic | 45.0% | |
| CCTAGATGAAGTGAGAGGTA+GGG | - | chr5_4:25338285-25338304 | None:intergenic | 45.0% | |
| ACCTAGATGAAGTGAGAGGT+AGG | - | chr5_4:25338286-25338305 | None:intergenic | 45.0% | |
| AATCTGCAAGATCTGCGACA+AGG | - | chr5_4:25338470-25338489 | None:intergenic | 45.0% | |
| GTTCATCAGTGGCAAAGGAA+AGG | - | chr5_4:25338717-25338736 | None:intergenic | 45.0% | |
| ATGGGAACAACTACCTCCAA+TGG | - | chr5_4:25338757-25338776 | None:intergenic | 45.0% | |
| ! | TGTGTCCTGTAATGGGAAGA+TGG | + | chr5_4:25338783-25338802 | Msa0845920:intron | 45.0% |
| ! | GTGTCCTGTAATGGGAAGAT+GGG | + | chr5_4:25338784-25338803 | Msa0845920:intron | 45.0% |
| CAATCATGGTGTAACCTTGG+AGG | - | chr5_4:25338816-25338835 | None:intergenic | 45.0% | |
| CTCCAAGGTTACACCATGAT+TGG | + | chr5_4:25338814-25338833 | Msa0845920:intron | 45.0% | |
| CACCAATCATGGTGTAACCT+TGG | - | chr5_4:25338819-25338838 | None:intergenic | 45.0% | |
| CAACAAGTCAGCACCAATCA+TGG | - | chr5_4:25338830-25338849 | None:intergenic | 45.0% | |
| ATTGTCGTCCTCTTTGAGTG+TGG | + | chr5_4:25338862-25338881 | Msa0845920:intron | 45.0% | |
| AGAAACCTCCACACTCAAAG+AGG | - | chr5_4:25338873-25338892 | None:intergenic | 45.0% | |
| AGCCATACCGTATTTGGTCA+TGG | + | chr5_4:25338901-25338920 | Msa0845920:intron | 45.0% | |
| TCCCTGATCCCTCTTATTCT+AGG | + | chr5_4:25334301-25334320 | Msa0845920:intron | 45.0% | |
| !!! | CAGTTTTTGCAGAAGTGTCG+GGG | - | chr5_4:25339264-25339283 | None:intergenic | 45.0% |
| !!! | GCAGTTTTTGCAGAAGTGTC+GGG | - | chr5_4:25339265-25339284 | None:intergenic | 45.0% |
| !! | GGCAGTTTTTGCAGAAGTGT+CGG | - | chr5_4:25339266-25339285 | None:intergenic | 45.0% |
| ACTTCTGCAAAAACTGCCAG+AGG | + | chr5_4:25339268-25339287 | Msa0845920:CDS | 45.0% | |
| ! | GCAAAAACTGCCAGAGGTAT+TGG | + | chr5_4:25339274-25339293 | Msa0845920:CDS | 45.0% |
| GACACAGGATAACACATTGC+AGG | - | chr5_4:25339519-25339538 | None:intergenic | 45.0% | |
| GTGGTTGTTTGGTACCATCA+TGG | + | chr5_4:25339565-25339584 | Msa0845920:CDS | 45.0% | |
| ! | AATGGGGGAGAGCTTTTCAT+GGG | + | chr5_4:25339804-25339823 | Msa0845920:CDS | 45.0% |
| CATGGGATTTGCATCTAAGG+GGG | + | chr5_4:25339821-25339840 | Msa0845920:CDS | 45.0% | |
| ATGGGATTTGCATCTAAGGG+GGG | + | chr5_4:25339822-25339841 | Msa0845920:CDS | 45.0% | |
| AGAGACCTTGATAAAGCGAC+AGG | - | chr5_4:25339894-25339913 | None:intergenic | 45.0% | |
| GTCTCTTGTGTTCCATGAGA+GGG | + | chr5_4:25339908-25339927 | Msa0845920:CDS | 45.0% | |
| GGCCTCATTCCAATCTACAG+AGG | + | chr5_4:25333874-25333893 | Msa0845920:intron | 50.0% | |
| GGGTTCTCAACAAGGCTTGA+AGG | - | chr5_4:25333917-25333936 | None:intergenic | 50.0% | |
| ! | TTTCGGACGAGGGAGTTTTC+GGG | - | chr5_4:25333937-25333956 | None:intergenic | 50.0% |
| TCTGTTTCCTAGACTGAGGG+TGG | - | chr5_4:25334180-25334199 | None:intergenic | 50.0% | |
| ! | CGTTTTCCTTGGCACTGCTT+TGG | + | chr5_4:25334431-25334450 | Msa0845920:intron | 50.0% |
| TTCTCACCAAAGCAGTGCCA+AGG | - | chr5_4:25334440-25334459 | None:intergenic | 50.0% | |
| !! | TCCGCAGTCTGTTGACTTGT+AGG | + | chr5_4:25334462-25334481 | Msa0845920:intron | 50.0% |
| TTCGGCTTCTGCTGAACTAC+GGG | + | chr5_4:25334710-25334729 | Msa0845920:intron | 50.0% | |
| ACTGACAGACGCTCAACATC+AGG | - | chr5_4:25334798-25334817 | None:intergenic | 50.0% | |
| ! | TTCACTGATGCTGATTGGGC+AGG | - | chr5_4:25334828-25334847 | None:intergenic | 50.0% |
| CTGTGGGACTGTTCATGAAC+TGG | + | chr5_4:25334949-25334968 | Msa0845920:intron | 50.0% | |
| ! | CAAACCATCTGAGACCCCTA+TGG | - | chr5_4:25335108-25335127 | None:intergenic | 50.0% |
| ATTGGCAGAGGTCTCAAACC+CGG | + | chr5_4:25335508-25335527 | Msa0845920:intron | 50.0% | |
| TCAAGAGACGTTTGCACCTG+TGG | - | chr5_4:25335663-25335682 | None:intergenic | 50.0% | |
| ! | AGGCACGACTAGTTGCAAAG+GGG | - | chr5_4:25335712-25335731 | None:intergenic | 50.0% |
| !! | CTGGGTTGGTAAGAGCTTCA+TGG | + | chr5_4:25335882-25335901 | Msa0845920:intron | 50.0% |
| TGTTGAAGTAGAGGGCTGAC+TGG | + | chr5_4:25336213-25336232 | Msa0845920:intron | 50.0% | |
| GTTGAAGTAGAGGGCTGACT+GGG | + | chr5_4:25336214-25336233 | Msa0845920:intron | 50.0% | |
| ! | TGACTGGGAGGTTGTTGACT+GGG | + | chr5_4:25336229-25336248 | Msa0845920:intron | 50.0% |
| GTCAGACATGGGCAAAGTAG+AGG | + | chr5_4:25336309-25336328 | Msa0845920:intron | 50.0% | |
| !! | GGTGGAGGTATTTCAGGACT+AGG | + | chr5_4:25336346-25336365 | Msa0845920:intron | 50.0% |
| ! | TCTGCCACCCCATTTTGTTG+TGG | + | chr5_4:25336889-25336908 | Msa0845920:intron | 50.0% |
| !! | CTGCCACCCCATTTTGTTGT+GGG | + | chr5_4:25336890-25336909 | Msa0845920:intron | 50.0% |
| !! | TGCCACCCCATTTTGTTGTG+GGG | + | chr5_4:25336891-25336910 | Msa0845920:intron | 50.0% |
| ! | GGCAGTGCTAAGATTTGCTC+AGG | - | chr5_4:25337474-25337493 | None:intergenic | 50.0% |
| TGCTTCAGATCACATGACGG+GGG | - | chr5_4:25337754-25337773 | None:intergenic | 50.0% | |
| GTGCTTCAGATCACATGACG+GGG | - | chr5_4:25337755-25337774 | None:intergenic | 50.0% | |
| GGTGCTTCAGATCACATGAC+GGG | - | chr5_4:25337756-25337775 | None:intergenic | 50.0% | |
| GGGTGCTTCAGATCACATGA+CGG | - | chr5_4:25337757-25337776 | None:intergenic | 50.0% | |
| TCAAAACCCACGTGGGACAA+GGG | - | chr5_4:25337996-25338015 | None:intergenic | 50.0% | |
| TTCAAAACCCACGTGGGACA+AGG | - | chr5_4:25337997-25338016 | None:intergenic | 50.0% | |
| !! | TTGTCCCACGTGGGTTTTGA+AGG | + | chr5_4:25337996-25338015 | Msa0845920:intron | 50.0% |
| GGAAACCTTCAAAACCCACG+TGG | - | chr5_4:25338004-25338023 | None:intergenic | 50.0% | |
| CATTGGTGTGTCCAGTCCTT+TGG | + | chr5_4:25338060-25338079 | Msa0845920:intron | 50.0% | |
| ! | GGAATGATGGTGAACTCCTC+GGG | + | chr5_4:25338127-25338146 | Msa0845920:intron | 50.0% |
| CATGGAAAATCAGTCCGCAC+TGG | - | chr5_4:25338156-25338175 | None:intergenic | 50.0% | |
| !! | CAGTGCGGACTGATTTTCCA+TGG | + | chr5_4:25338154-25338173 | Msa0845920:intron | 50.0% |
| GTCGTCTACCATAGCTTCCA+TGG | - | chr5_4:25338174-25338193 | None:intergenic | 50.0% | |
| ! | GAAGTGAGAGGTAGGGTACT+TGG | - | chr5_4:25338278-25338297 | None:intergenic | 50.0% |
| CCCTACCTCTCACTTCATCT+AGG | + | chr5_4:25338282-25338301 | Msa0845920:intron | 50.0% | |
| TTTCTTGGAATCAGCAGGGC+AGG | + | chr5_4:25338364-25338383 | Msa0845920:intron | 50.0% | |
| ATAGCAGTCTCACCCGTCAA+TGG | - | chr5_4:25338424-25338443 | None:intergenic | 50.0% | |
| ! | TCCTGTAATGGGAAGATGGG+TGG | + | chr5_4:25338787-25338806 | Msa0845920:intron | 50.0% |
| ACCACCCATCTTCCCATTAC+AGG | - | chr5_4:25338791-25338810 | None:intergenic | 50.0% | |
| ! | TGTAATGGGAAGATGGGTGG+TGG | + | chr5_4:25338790-25338809 | Msa0845920:intron | 50.0% |
| !! | GGTGCTGACTTGTTGTGAAG+AGG | + | chr5_4:25338835-25338854 | Msa0845920:intron | 50.0% |
| TCTGTTTCCTAGACTGAGGG+TGG | - | chr5_4:25334180-25334199 | None:intergenic | 50.0% | |
| !! | TGCCAGAGGTATTGGACTTC+CGG | + | chr5_4:25339282-25339301 | Msa0845920:CDS | 50.0% |
| CATATTTCTCGTGGCTCCTC+CGG | - | chr5_4:25339304-25339323 | None:intergenic | 50.0% | |
| GGGTTCCAAGAAAACTGTGG+AGG | - | chr5_4:25339498-25339517 | None:intergenic | 50.0% | |
| GCAGGGTTCCAAGAAAACTG+TGG | - | chr5_4:25339501-25339520 | None:intergenic | 50.0% | |
| ! | GAATGGGGGAGAGCTTTTCA+TGG | + | chr5_4:25339803-25339822 | Msa0845920:CDS | 50.0% |
| GGTCTCTTGTGTTCCATGAG+AGG | + | chr5_4:25339907-25339926 | Msa0845920:CDS | 50.0% | |
| TCAGTGGCCTGAAGTCCTTC+TGG | + | chr5_4:25333482-25333501 | Msa0845920:intron | 55.0% | |
| GCTGAACTACGGGACACAAC+AGG | + | chr5_4:25334720-25334739 | Msa0845920:intron | 55.0% | |
| GGGGAAACTTGGTCACTTGG+AGG | - | chr5_4:25334758-25334777 | None:intergenic | 55.0% | |
| GCATCCATAGGGGTCTCAGA+TGG | + | chr5_4:25335101-25335120 | Msa0845920:intron | 55.0% | |
| GAGGTAGCTCGGTCGAAGAA+AGG | - | chr5_4:25335194-25335213 | None:intergenic | 55.0% | |
| TCCTTGGGATGGAGGTAGCT+CGG | - | chr5_4:25335205-25335224 | None:intergenic | 55.0% | |
| GCAGTCATCGACAGGGAAGA+AGG | - | chr5_4:25335351-25335370 | None:intergenic | 55.0% | |
| TTGGCAGAGGTCTCAAACCC+GGG | + | chr5_4:25335509-25335528 | Msa0845920:intron | 55.0% | |
| AGCATCCGGTGGGATGCAAA+TGG | - | chr5_4:25335781-25335800 | None:intergenic | 55.0% | |
| !! | CCATCAGGAAAGCATCCGGT+GGG | - | chr5_4:25335791-25335810 | None:intergenic | 55.0% |
| CTGACTGGGAGGTTGTTGAC+TGG | + | chr5_4:25336228-25336247 | Msa0845920:intron | 55.0% | |
| ACATGGGCAAAGTAGAGGGC+TGG | + | chr5_4:25336314-25336333 | Msa0845920:intron | 55.0% | |
| !! | AGTAGAGGGCTGGTCTGACA+CGG | + | chr5_4:25336324-25336343 | Msa0845920:intron | 55.0% |
| !! | GACACGGGTGGAGGTATTTC+AGG | + | chr5_4:25336340-25336359 | Msa0845920:intron | 55.0% |
| CACCCCACAACAAAATGGGG+TGG | - | chr5_4:25336896-25336915 | None:intergenic | 55.0% | |
| TTGGATTCGGGGAGGACGAT+TGG | - | chr5_4:25337495-25337514 | None:intergenic | 55.0% | |
| AATCGTCCTCCCCGAATCCA+AGG | + | chr5_4:25337494-25337513 | Msa0845920:intron | 55.0% | |
| TTCAGACCTTGGATTCGGGG+AGG | - | chr5_4:25337503-25337522 | None:intergenic | 55.0% | |
| GTCGTCCTCTTTGAGTGTGG+AGG | + | chr5_4:25338865-25338884 | Msa0845920:intron | 55.0% | |
| CTCCGGAAGTCCAATACCTC+TGG | - | chr5_4:25339287-25339306 | None:intergenic | 55.0% | |
| !! | CAGAGGTATTGGACTTCCGG+AGG | + | chr5_4:25339285-25339304 | Msa0845920:CDS | 55.0% |
| CACACAGCCACCCTCAGTCT+AGG | + | chr5_4:25334170-25334189 | Msa0845920:intron | 60.0% | |
| TCCACACTCCCCCTCAAGCT+AGG | + | chr5_4:25334364-25334383 | Msa0845920:intron | 60.0% | |
| ACCTAGCTTGAGGGGGAGTG+TGG | - | chr5_4:25334368-25334387 | None:intergenic | 60.0% | |
| ACCGAGCTACCTCCATCCCA+AGG | + | chr5_4:25335201-25335220 | Msa0845920:intron | 60.0% | |
| TGGCAGAGGTCTCAAACCCG+GGG | + | chr5_4:25335510-25335529 | Msa0845920:intron | 60.0% | |
| CCCACCGGATGCTTTCCTGA+TGG | + | chr5_4:25335788-25335807 | Msa0845920:intron | 60.0% | |
| !! | GCCATCAGGAAAGCATCCGG+TGG | - | chr5_4:25335792-25335811 | None:intergenic | 60.0% |
| GAAGTAGAGGGCTGACTGGG+AGG | + | chr5_4:25336217-25336236 | Msa0845920:intron | 60.0% | |
| ! | CTGGGAGGTTGTTGACTGGG+AGG | + | chr5_4:25336232-25336251 | Msa0845920:intron | 60.0% |
| !! | GTAGAGGGCTGGTCTGACAC+GGG | + | chr5_4:25336325-25336344 | Msa0845920:intron | 60.0% |
| ACGTGGGACAAGGGAAGTCG+AGG | - | chr5_4:25337987-25338006 | None:intergenic | 60.0% | |
| TCGACTTCCCTTGTCCCACG+TGG | + | chr5_4:25337986-25338005 | Msa0845920:intron | 60.0% | |
| CGACTTCCCTTGTCCCACGT+GGG | + | chr5_4:25337987-25338006 | Msa0845920:intron | 60.0% | |
| ! | AAGATGGGTGGTGGCCTCCA+AGG | + | chr5_4:25338799-25338818 | Msa0845920:intron | 60.0% |
| CACACAGCCACCCTCAGTCT+AGG | + | chr5_4:25334170-25334189 | Msa0845920:intron | 60.0% | |
| GGCAGAGGTCTCAAACCCGG+GGG | + | chr5_4:25335511-25335530 | Msa0845920:intron | 65.0% | |
| GCAGAGGTCTCAAACCCGGG+GGG | + | chr5_4:25335512-25335531 | Msa0845920:intron | 65.0% | |
| AACTCCTCGGGCAGCCAGTG+CGG | + | chr5_4:25338139-25338158 | Msa0845920:intron | 65.0% | |
| !! | GAGGGCTGGTCTGACACGGG+TGG | + | chr5_4:25336328-25336347 | Msa0845920:intron | 70.0% |
| !! | GGCTGGTCTGACACGGGTGG+AGG | + | chr5_4:25336331-25336350 | Msa0845920:intron | 70.0% |
| !! | CAGTCCGCACTGGCTGCCCG+AGG | - | chr5_4:25338146-25338165 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 25332537 | 25339935 | 25332537 | ID=Msa0845920;Name=Msa0845920 |
| chr5_4 | mRNA | 25332537 | 25339935 | 25332537 | ID=Msa0845920-mRNA-1;Parent=Msa0845920;Name=Msa0845920-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0|1|0|0.33|3|0|346 |
| chr5_4 | exon | 25332537 | 25332743 | 25332537 | ID=Msa0845920-mRNA-1:exon:10069;Parent=Msa0845920-mRNA-1 |
| chr5_4 | exon | 25333875 | 25334005 | 25333875 | ID=Msa0845920-mRNA-1:exon:10070;Parent=Msa0845920-mRNA-1 |
| chr5_4 | exon | 25339233 | 25339935 | 25339233 | ID=Msa0845920-mRNA-1:exon:10071;Parent=Msa0845920-mRNA-1 |
| chr5_4 | CDS | 25332537 | 25332743 | 25332537 | ID=Msa0845920-mRNA-1:cds;Parent=Msa0845920-mRNA-1 |
| chr5_4 | CDS | 25333875 | 25334005 | 25333875 | ID=Msa0845920-mRNA-1:cds;Parent=Msa0845920-mRNA-1 |
| chr5_4 | CDS | 25339233 | 25339935 | 25339233 | ID=Msa0845920-mRNA-1:cds;Parent=Msa0845920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
