AlfalfaGEDB | Msa0847440

M. sativa cultivar zhongmu-4 / Msa0847440

KEGG: K09338
GO: GO:0000003 GO:0000902 GO:0000904 GO:0000976 GO:0001067 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009664 GO:0009791 GO:0009827 GO:0009828 GO:0009888 GO:0009889 GO:0009908 GO:0009987 GO:0010026 GO:0010090 GO:0010091 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0022414 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032989 GO:0042545 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0045229 GO:0045595 GO:0045596 GO:0048367 GO:0048437 GO:0048468 GO:0048497 GO:0048519 GO:0048523 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0071554 GO:0071555 GO:0071669 GO:0071840 GO:0080090 GO:0090558 GO:0090567 GO:0090626 GO:0090700 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:1990837 GO:2000112 GO:2001141
PFAM: PF00046.32

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0847440	AES97147.1	86.719	384	38	4	1	382	1	373	0.0	652

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0847440	sp\|Q69T58\|ROC8_ORYSJ	55.294	170	69	4	33	201	15	178	1.59e-52	189

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0847440	G7JWW7	86.719	384	38	4	1	382	1	373	0.0	652

TFs/TRs:

Gene ID	Type	Classification
Msa0847440	TF	HB-other

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0768830	Msa0847440	0.862879	3.706041e-64	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0847440	MtrunA17_Chr5g0419811	84.772	197	19	2	187	382	1	187	9.89e-114	329
Msa0847440	MtrunA17_Chr5g0419821	87.261	157	18	2	1	156	1	156	1.25e-87	262
Msa0847440	MtrunA17_Chr6g0481041	58.730	189	73	3	1	189	1	184	8.26e-65	219
Msa0847440	MtrunA17_Chr5g0410711	46.667	180	94	2	9	187	65	243	3.42e-41	154
Msa0847440	MtrunA17_Chr2g0322731	43.103	174	94	2	11	180	74	246	4.08e-40	151
Msa0847440	MtrunA17_Chr1g0203671	49.359	156	76	2	31	184	93	247	2.60e-39	149
Msa0847440	MtrunA17_Chr3g0109391	57.343	143	30	2	213	355	587	698	1.62e-38	147
Msa0847440	MtrunA17_Chr8g0350321	47.518	141	73	1	33	173	115	254	2.74e-38	146
Msa0847440	MtrunA17_Chr7g0246631	47.518	141	73	1	33	173	91	230	3.43e-38	145
Msa0847440	MtrunA17_Chr4g0024351	42.286	175	96	2	31	201	58	231	6.89e-38	144
Msa0847440	MtrunA17_Chr7g0224481	44.886	176	67	3	1	176	1	146	3.97e-36	134
Msa0847440	MtrunA17_Chr7g0224451	44.886	176	67	3	1	176	1	146	1.07e-35	135
Msa0847440	MtrunA17_Chr6g0472471	44.785	163	86	3	37	198	73	232	1.67e-33	132
Msa0847440	MtrunA17_Chr2g0331581	41.221	131	74	2	37	165	143	272	3.15e-24	104
Msa0847440	MtrunA17_Chr5g0433301	44.366	142	46	2	214	355	581	689	5.82e-24	103
Msa0847440	MtrunA17_Chr5g0394111	36.842	114	71	1	41	154	40	152	3.31e-18	86.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0847440	AT1G73360.1	55.696	158	69	1	33	190	32	188	2.78e-51	182
Msa0847440	AT1G17920.2	52.667	150	69	2	36	184	24	172	2.38e-46	168
Msa0847440	AT1G17920.1	52.667	150	69	2	36	184	24	172	2.38e-46	168
Msa0847440	AT4G04890.2	45.763	177	91	4	32	204	61	236	5.52e-39	148
Msa0847440	AT4G04890.1	45.763	177	91	4	32	204	61	236	5.52e-39	148
Msa0847440	AT4G00730.2	50.746	134	65	1	33	166	134	266	4.01e-38	144
Msa0847440	AT4G00730.1	50.746	134	65	1	33	166	134	266	6.29e-38	145
Msa0847440	AT4G21750.2	49.286	140	70	1	32	171	61	199	1.09e-37	144
Msa0847440	AT4G21750.1	49.286	140	70	1	32	171	61	199	1.09e-37	144
Msa0847440	AT4G21750.3	49.286	140	70	1	32	171	61	199	1.09e-37	144
Msa0847440	AT4G21750.4	49.286	140	70	1	32	171	61	199	1.09e-37	144
Msa0847440	AT1G05230.12	46.154	169	88	2	32	198	63	230	1.82e-36	140
Msa0847440	AT1G05230.8	46.154	169	88	2	32	198	63	230	2.75e-36	140
Msa0847440	AT1G05230.4	46.154	169	88	2	32	198	63	230	2.75e-36	140
Msa0847440	AT1G05230.9	46.154	169	88	2	32	198	63	230	2.75e-36	140
Msa0847440	AT1G05230.10	46.154	169	88	2	32	198	63	230	2.75e-36	140
Msa0847440	AT1G05230.7	46.154	169	88	2	32	198	63	230	2.75e-36	140
Msa0847440	AT1G05230.11	46.154	169	88	2	32	198	63	230	2.75e-36	140
Msa0847440	AT1G05230.2	46.154	169	88	2	32	198	63	230	2.75e-36	140
Msa0847440	AT1G05230.6	46.154	169	88	2	32	198	63	230	2.75e-36	140
Msa0847440	AT1G05230.5	46.154	169	88	2	32	198	63	230	2.75e-36	140
Msa0847440	AT1G05230.1	46.154	169	88	2	32	198	63	230	2.75e-36	140
Msa0847440	AT1G05230.3	46.154	169	88	2	32	198	63	230	2.81e-36	140
Msa0847440	AT3G61150.1	48.529	136	69	1	33	168	110	244	3.76e-36	140
Msa0847440	AT5G46880.3	46.259	147	76	2	32	178	110	253	4.10e-33	131
Msa0847440	AT5G46880.1	46.259	147	76	2	32	178	110	253	4.10e-33	131
Msa0847440	AT5G46880.2	46.259	147	76	2	32	178	110	253	4.10e-33	131
Msa0847440	AT5G52170.3	42.593	162	85	3	10	169	37	192	8.86e-32	127
Msa0847440	AT5G52170.1	42.593	162	85	3	10	169	37	192	8.86e-32	127
Msa0847440	AT5G52170.2	42.593	162	85	3	10	169	37	192	9.07e-32	127
Msa0847440	AT5G17320.1	47.020	151	78	2	27	176	20	169	2.39e-31	126
Msa0847440	AT2G32370.1	41.714	175	95	4	27	197	62	233	9.66e-29	118
Msa0847440	AT1G34650.1	40.141	142	85	0	38	179	20	161	1.33e-28	118
Msa0847440	AT3G03260.1	42.748	131	74	1	35	164	24	154	5.92e-27	113
Msa0847440	AT3G03260.2	42.748	131	74	1	35	164	24	154	6.60e-27	112
Msa0847440	AT1G79840.1	41.104	163	74	5	31	191	99	241	1.54e-24	105
Msa0847440	AT1G79840.5	41.104	163	74	5	31	191	99	241	1.90e-24	105
Msa0847440	AT1G79840.3	41.104	163	74	5	31	191	41	183	2.07e-24	105
Msa0847440	AT1G79840.6	41.104	163	74	5	31	191	41	183	2.07e-24	105
Msa0847440	AT1G79840.4	41.104	163	74	5	31	191	99	241	2.19e-24	105
Msa0847440	AT1G79840.2	41.104	163	74	5	31	191	128	270	2.58e-24	105
Msa0847440	AT4G17710.1	42.748	131	62	2	32	162	87	204	3.46e-24	105
Msa0847440	AT4G25530.1	32.231	121	80	1	36	154	40	160	6.41e-13	70.9

Find 109 sgRNAs with CRISPR-Local

Find 217 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CAATCTTACCACATTGTTTC+TGG	0.133950	5_4:-29431696	Msa0847440:three_prime_UTR
ACAATGCAATTAGGGGAATT+TGG	0.182664	5_4:-29431957	Msa0847440:CDS
ATGTCGCATGCGCAATATTC+TGG	0.202860	5_4:-29432215	Msa0847440:CDS
CACCTGAGAAAATATGATTT+TGG	0.206900	5_4:+29432150	None:intergenic
ACCAATTCAAATATCATCTT+TGG	0.219702	5_4:-29432462	Msa0847440:CDS
CCCAACTTTCTCTTATAAAT+AGG	0.235957	5_4:+29431645	None:intergenic
TTGGAAGGAGTATTACATTT+TGG	0.238603	5_4:+29431669	None:intergenic
GGTGCTTCGACAATGCAATT+AGG	0.245347	5_4:-29431966	Msa0847440:CDS
GTGCTTCGACAATGCAATTA+GGG	0.285038	5_4:-29431965	Msa0847440:CDS
GTTATGGTCAGATCAGATTT+TGG	0.293590	5_4:-29434547	Msa0847440:CDS
CAAGCGGGAGAAATACATTA+AGG	0.307728	5_4:-29431727	Msa0847440:three_prime_UTR
CCACTACTTGGTAAACTTGA+TGG	0.323390	5_4:+29432323	None:intergenic
CCGGGTTACACCACTTCATT+AGG	0.330990	5_4:-29431996	Msa0847440:CDS
AAAGAATTAGCTTTGAGTTA+TGG	0.345545	5_4:-29434563	Msa0847440:CDS
GTTGGAAATTCATTTGATAT+TGG	0.350671	5_4:-29432407	Msa0847440:CDS
TCAACAAAAGTTGATGTATC+TGG	0.356195	5_4:-29431622	Msa0847440:three_prime_UTR
ACATCTTATCTTATCATTCT+CGG	0.356227	5_4:+29433246	None:intergenic
GATCATTCTTGAATAGCATT+TGG	0.373233	5_4:-29431795	Msa0847440:CDS
TTAACGAAAGTTGATGAATC+TGG	0.373613	5_4:+29431586	None:intergenic
TTACTTCTTTGAATCTCGTT+AGG	0.387005	5_4:+29434787	None:intergenic
TCATCGTTGCATTGCACTAA+AGG	0.394418	5_4:-29432365	Msa0847440:CDS
ACCTGAAGATATTCAAAAGA+TGG	0.405470	5_4:-29431755	Msa0847440:CDS
TCATCTTTGGATTCAACAAT+GGG	0.406650	5_4:-29432449	Msa0847440:CDS
GATTCAACAATGGGGAGTAT+TGG	0.411860	5_4:-29432440	Msa0847440:CDS
TCCAAAGATGATATTTGAAT+TGG	0.413568	5_4:+29432461	None:intergenic
AACAATTACCTCAACAATCA+TGG	0.416923	5_4:-29432283	Msa0847440:CDS
CCTATTTATAAGAGAAAGTT+GGG	0.422085	5_4:-29431645	Msa0847440:three_prime_UTR
AAAGATGATATTTGAATTGG+TGG	0.425517	5_4:+29432464	None:intergenic
TCATCTTTATTATTTATGTC+AGG	0.427766	5_4:-29431551	Msa0847440:three_prime_UTR
AAATAACAATCACCATTGAT+TGG	0.442141	5_4:+29433163	None:intergenic
GCAATATTCTGGACAAGATT+CGG	0.442351	5_4:-29432204	Msa0847440:CDS
TCCTATTTATAAGAGAAAGT+TGG	0.442773	5_4:-29431646	Msa0847440:three_prime_UTR
GATATTTGAATTGGTGGAAC+TGG	0.454943	5_4:+29432470	None:intergenic
GAAAATTTAATCTGCCCCTC+TGG	0.458560	5_4:-29433196	Msa0847440:CDS
TCTACTCCCCACCACTGTCC+CGG	0.468646	5_4:-29432015	Msa0847440:CDS
CTCTTATAAATAGGATTGGA+AGG	0.470484	5_4:+29431654	None:intergenic
CTTTCTCTTATAAATAGGAT+TGG	0.470767	5_4:+29431650	None:intergenic
TTGCATTGCACTAAAGGAAA+AGG	0.472909	5_4:-29432359	Msa0847440:CDS
GAAATGATAACCGTTCACTA+AGG	0.481739	5_4:-29433270	Msa0847440:CDS
TGCTCAAGTGAGGTAGAAGT+TGG	0.486956	5_4:+29431441	None:intergenic
GTGTAACCCGGGACAGTGGT+GGG	0.487177	5_4:+29432008	None:intergenic
GGACATCTAAATCTAAATGT+GGG	0.488495	5_4:+29432171	None:intergenic
GGGGAGTATTGGACAAGGAT+TGG	0.490348	5_4:-29432429	Msa0847440:CDS
ATCAACAACGGACCACTACT+TGG	0.491789	5_4:+29432311	None:intergenic
ATCATCTTTGGATTCAACAA+TGG	0.498569	5_4:-29432450	Msa0847440:CDS
TAGTGCAATGCAACGATGAA+TGG	0.498785	5_4:+29432369	None:intergenic
TGGACATCTAAATCTAAATG+TGG	0.506439	5_4:+29432170	None:intergenic
TCAAAAGATGGGATAACAAG+CGG	0.507610	5_4:-29431743	Msa0847440:exon
AAGCGGGAGAAATACATTAA+GGG	0.512222	5_4:-29431726	Msa0847440:three_prime_UTR
GGTGTAACCCGGGACAGTGG+TGG	0.512415	5_4:+29432007	None:intergenic
AGTATTGGACAAGGATTGGT+TGG	0.518348	5_4:-29432425	Msa0847440:CDS
GAGAAATACATTAAGGGCAT+TGG	0.518833	5_4:-29431720	Msa0847440:three_prime_UTR
ACCACTTCATTAGGTGAGAC+CGG	0.518859	5_4:-29431987	Msa0847440:CDS
CCTGAAGATATTCAAAAGAT+GGG	0.518915	5_4:-29431754	Msa0847440:CDS
CCTAATGAAGTGGTGTAACC+CGG	0.520984	5_4:+29431996	None:intergenic
CTACTCCCCACCACTGTCCC+GGG	0.522171	5_4:-29432014	Msa0847440:CDS
ATTAGGGGAATTTGGATTCG+AGG	0.533461	5_4:-29431949	Msa0847440:CDS
ATGTGAGAATATATCTATGA+AGG	0.534689	5_4:-29433227	Msa0847440:CDS
TGTAACCCGGGACAGTGGTG+GGG	0.544537	5_4:+29432009	None:intergenic
AGTATGCAGGTCGATACCTT+TGG	0.549314	5_4:-29432245	Msa0847440:CDS
ATTTGAATTGGTGGAACTGG+TGG	0.550148	5_4:+29432473	None:intergenic
GAGTATCAGAGTGGAGGATG+TGG	0.551851	5_4:-29434859	Msa0847440:CDS
CAAAAGATGGGATAACAAGC+GGG	0.554197	5_4:-29431742	Msa0847440:exon
TAGAAGATCAGATGAATCGA+TGG	0.554577	5_4:+29432034	None:intergenic
TAGAAGATCAGATGAATCGA+TGG	0.554577	5_4:+29432064	None:intergenic
CATTCTCGGCCCTTAGTGAA+CGG	0.554659	5_4:+29433260	None:intergenic
TAGAAGATCAGATGAATCGA+AGG	0.561503	5_4:+29432094	None:intergenic
ACCTGCATACTTTGATACCT+CGG	0.565962	5_4:+29432257	None:intergenic
TTAGGGGAATTTGGATTCGA+GGG	0.567383	5_4:-29431948	Msa0847440:CDS
AGATCAGATGAATCGATGGT+GGG	0.567478	5_4:+29432038	None:intergenic
AGATCAGATGAATCGATGGT+GGG	0.567478	5_4:+29432068	None:intergenic
GACATCTAAATCTAAATGTG+GGG	0.569705	5_4:+29432172	None:intergenic
TAATTGCATTGTCGAAGCAC+CGG	0.570679	5_4:+29431968	None:intergenic
AGATCAGATGAATCGAAGGT+GGG	0.572619	5_4:+29432098	None:intergenic
TCCGAGGTATCAAAGTATGC+AGG	0.573808	5_4:-29432258	Msa0847440:CDS
TCAAGCTGATTCGGAGTGTG+AGG	0.574751	5_4:+29434745	None:intergenic
ATGCGACATTGCGTTGCCAA+AGG	0.575172	5_4:+29432229	None:intergenic
AATTTAATCTGCCCCTCTGG+TGG	0.575675	5_4:-29433193	Msa0847440:CDS
GGTGGTTGTCGTCCAATCAA+TGG	0.578272	5_4:-29433175	Msa0847440:CDS
AAATGATAACCGTTCACTAA+GGG	0.581718	5_4:-29433269	Msa0847440:CDS
AGCATTATATCTGAATACAC+TGG	0.584252	5_4:-29432515	Msa0847440:CDS
GCTGATTCGGAGTGTGAGGA+CGG	0.593800	5_4:+29434749	None:intergenic
ACCGGTCTCACCTAATGAAG+TGG	0.597496	5_4:+29431986	None:intergenic
AAGATCAGATGAATCGAAGG+TGG	0.601701	5_4:+29432097	None:intergenic
AAGATCAGATGAATCGATGG+TGG	0.602370	5_4:+29432037	None:intergenic
AAGATCAGATGAATCGATGG+TGG	0.602370	5_4:+29432067	None:intergenic
GAAACTGGTACTTACTCCCA+CGG	0.602394	5_4:+29431915	None:intergenic
AAATGCTCTACTCAAAGAAG+AGG	0.606481	5_4:-29433116	Msa0847440:intron
CTAATGGAGTATCAGAGTGG+AGG	0.607888	5_4:-29434865	Msa0847440:CDS
GATCAGATGAATCGATGGTG+GGG	0.608527	5_4:+29432039	None:intergenic
GATCAGATGAATCGATGGTG+GGG	0.608527	5_4:+29432069	None:intergenic
CCATCAAGTTTACCAAGTAG+TGG	0.609404	5_4:-29432323	Msa0847440:CDS
GATCAGATGAATCGAAGGTG+GGG	0.610966	5_4:+29432099	None:intergenic
GAACAAAAGGGTTCAGACCA+AGG	0.614483	5_4:-29434519	Msa0847440:intron
CTCGGAGTCCATGATTGTTG+AGG	0.616580	5_4:+29432275	None:intergenic
TGAATCTCGTTAGGAGTGTG+AGG	0.625793	5_4:+29434796	None:intergenic
AATTGTTCATTCATCAACAA+CGG	0.631258	5_4:+29432299	None:intergenic
ATTGGACGACAACCACCAGA+GGG	0.645157	5_4:+29433181	None:intergenic
CTAATGAAGTGGTGTAACCC+GGG	0.645481	5_4:+29431997	None:intergenic
TTGGTTGTCCAGAAACAATG+TGG	0.649003	5_4:+29431688	None:intergenic
TGCTTCGACAATGCAATTAG+GGG	0.669628	5_4:-29431964	Msa0847440:CDS
AGACTAATGGAGTATCAGAG+TGG	0.672355	5_4:-29434868	None:intergenic
GATTGGACGACAACCACCAG+AGG	0.675241	5_4:+29433180	None:intergenic
CTCAACAATCATGGACTCCG+AGG	0.676275	5_4:-29432274	Msa0847440:CDS
ACATCTAAATCTAAATGTGG+GGG	0.688926	5_4:+29432173	None:intergenic
ACAATGGGGAGTATTGGACA+AGG	0.710979	5_4:-29432434	Msa0847440:CDS
AGTGGTGTAACCCGGGACAG+TGG	0.726941	5_4:+29432004	None:intergenic
CATCTTTGGATTCAACAATG+GGG	0.731611	5_4:-29432448	Msa0847440:CDS
TTGGACGACAACCACCAGAG+GGG	0.786535	5_4:+29433182	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATAAAATAAAATAAAATAAA+AGG	+	chr5_4:29431674-29431693	None:intergenic	0.0%
!!!	TTTATTTTATTTTATTTTTT+AGG	-	chr5_4:29431679-29431698	Msa0847440:three_prime_UTR	0.0%
!!!	TTATTTTATTTTATTTTTTA+GGG	-	chr5_4:29431680-29431699	Msa0847440:three_prime_UTR	0.0%
!!	ATAATAATAATAATAATAAT+AGG	+	chr5_4:29432502-29432521	None:intergenic	0.0%
!!!	TTTCAAATCTTTTTTTTATA+TGG	-	chr5_4:29431648-29431667	Msa0847440:three_prime_UTR	10.0%
!!	AAAAAATTAAAAACACAATT+AGG	+	chr5_4:29431980-29431999	None:intergenic	10.0%
!!!	ACCAAAAAAATATTTTTATA+GGG	+	chr5_4:29432686-29432705	None:intergenic	10.0%
!!!	AACCAAAAAAATATTTTTAT+AGG	+	chr5_4:29432687-29432706	None:intergenic	10.0%
!!!	TAAAAATATTTTTTTGGTTT+TGG	-	chr5_4:29432688-29432707	Msa0847440:intron	10.0%
!!!	AAATATAAAAAATTTGGTTT+TGG	+	chr5_4:29432884-29432903	None:intergenic	10.0%
!!	ATAAAGAATCATTTAAAAAT+AGG	+	chr5_4:29432991-29433010	None:intergenic	10.0%
!!!	TATTTTTAAATGATTCTTTA+TGG	-	chr5_4:29432990-29433009	Msa0847440:intron	10.0%
!!!	TTATTCATAATTTAAAATTG+TGG	-	chr5_4:29433537-29433556	Msa0847440:intron	10.0%
!!!	CTTGTTTTATATTTTTTATT+TGG	-	chr5_4:29433709-29433728	Msa0847440:intron	10.0%
!!!	ATATACATGATATTGTTATT+AGG	-	chr5_4:29432004-29432023	Msa0847440:CDS	15.0%
!!!	TATACATGATATTGTTATTA+GGG	-	chr5_4:29432005-29432024	Msa0847440:CDS	15.0%
!!!	AACAAAATTTATTGATTTCT+TGG	+	chr5_4:29432154-29432173	None:intergenic	15.0%
!!!	GTTTATCCTTTAAAAAAAAT+AGG	-	chr5_4:29432264-29432283	Msa0847440:CDS	15.0%
!!!	AACTTACCTATTTTTTTTAA+AGG	+	chr5_4:29432273-29432292	None:intergenic	15.0%
!!	TTCAATACAACATTAATTAT+TGG	+	chr5_4:29432309-29432328	None:intergenic	15.0%
!!	AGAAATATTGTATTGAAAAA+TGG	+	chr5_4:29432431-29432450	None:intergenic	15.0%
!!!	TTATTTTTAAGGCTTAAATA+TGG	-	chr5_4:29432622-29432641	Msa0847440:intron	15.0%
!!!	TCCCTATAAAAATATTTTTT+TGG	-	chr5_4:29432682-29432701	Msa0847440:intron	15.0%
!!	AAATCATTTCATATTGAAAT+TGG	-	chr5_4:29432739-29432758	Msa0847440:intron	15.0%
!!!	ATTGTTATTTTGATAGAAAA+AGG	-	chr5_4:29433166-29433185	Msa0847440:CDS	15.0%
!!	ATTTAGATGCAAAATTTAAA+AGG	-	chr5_4:29433280-29433299	Msa0847440:CDS	15.0%
!!!	ACAAATATTTTGATGAATTT+CGG	+	chr5_4:29433470-29433489	None:intergenic	15.0%
!!	AATTCATCAAAATATTTGTA+AGG	-	chr5_4:29433471-29433490	Msa0847440:intron	15.0%
!!!	GTAAATATGTTTTTAAATTG+CGG	+	chr5_4:29433690-29433709	None:intergenic	15.0%
!!	ATAATAAAGATGACAAAAAT+TGG	+	chr5_4:29434758-29434777	None:intergenic	15.0%
!!!	TTTATTTTTTAGGGTGTTTA+AGG	-	chr5_4:29431689-29431708	Msa0847440:three_prime_UTR	20.0%
!!	TTCCTTAACAAATATCATTA+AGG	+	chr5_4:29432043-29432062	None:intergenic	20.0%
!!	TTAAGGAAATCAAAAGTAAT+AGG	-	chr5_4:29432055-29432074	Msa0847440:CDS	20.0%
!!!	TATTTCTGTCTACAATAAAT+AGG	-	chr5_4:29432238-29432257	Msa0847440:CDS	20.0%
!!!	CAATATGAAATGATTTTACA+AGG	+	chr5_4:29432735-29432754	None:intergenic	20.0%
!!	GGACTAAAATGAATATTATA+GGG	+	chr5_4:29432766-29432785	None:intergenic	20.0%
!!	AGGACTAAAATGAATATTAT+AGG	+	chr5_4:29432767-29432786	None:intergenic	20.0%
!!!	AAATTGATTCATATTGGATT+TGG	+	chr5_4:29432833-29432852	None:intergenic	20.0%
!!!	CTTGTAAAATTGATTCATAT+TGG	+	chr5_4:29432839-29432858	None:intergenic	20.0%
!!!	CAATATGAATCAATTTTACA+AGG	-	chr5_4:29432837-29432856	Msa0847440:intron	20.0%
!!!	ACCAAATTTTTTATATTTGC+AGG	-	chr5_4:29432886-29432905	Msa0847440:intron	20.0%
!!!	CCAAATTTTTTATATTTGCA+GGG	-	chr5_4:29432887-29432906	Msa0847440:intron	20.0%
!!!	AACCCAAAAAATATTTTTAC+AGG	-	chr5_4:29432915-29432934	Msa0847440:intron	20.0%
!!!	ACCCAAAAAATATTTTTACA+GGG	-	chr5_4:29432916-29432935	Msa0847440:intron	20.0%
!!!	TCCCTGTAAAAATATTTTTT+GGG	+	chr5_4:29432920-29432939	None:intergenic	20.0%
!!!	TATAGTATTGCCAATTTTTT+AGG	-	chr5_4:29433378-29433397	Msa0847440:intron	20.0%
!!!	TTTTATAGAGACTAAATTGA+GGG	+	chr5_4:29433435-29433454	None:intergenic	20.0%
!!	GTCTCTATAAAAGAAAAATA+AGG	-	chr5_4:29433443-29433462	Msa0847440:intron	20.0%
!!	TCATCTTTATTATTTATGTC+AGG	-	chr5_4:29434765-29434784	Msa0847440:CDS	20.0%
!!!	TTTTGTTTTTCATCAGGTTT+TGG	+	chr5_4:29431720-29431739	None:intergenic	25.0%
!!!	AAAGAATTAGCTTTGAGTTA+TGG	-	chr5_4:29431753-29431772	Msa0847440:CDS	25.0%
!!!	ATTTTGGTTTCAGAACAAAA+GGG	-	chr5_4:29431785-29431804	Msa0847440:CDS	25.0%
!	GAGAAAAATTAACAATACCT+TGG	+	chr5_4:29431817-29431836	None:intergenic	25.0%
!!	ATGTTGTTCTTGTGTTTTAT+TGG	-	chr5_4:29431891-29431910	Msa0847440:intron	25.0%
!	GAATTATAAAGTTTAGCTGT+CGG	-	chr5_4:29431913-29431932	Msa0847440:intron	25.0%
!	GCAAAAAAATACACACATAA+AGG	+	chr5_4:29431958-29431977	None:intergenic	25.0%
!!	TGCCTTAATGATATTTGTTA+AGG	-	chr5_4:29432038-29432057	Msa0847440:CDS	25.0%
!	AAACGACAAGTATTATGAAA+CGG	+	chr5_4:29432113-29432132	None:intergenic	25.0%
!!	TCTTTATGACATTGATTAAG+AGG	+	chr5_4:29432462-29432481	None:intergenic	25.0%
!!!	TTGTGCATGTGTTATTTTTA+AGG	-	chr5_4:29432611-29432630	Msa0847440:intron	25.0%
!	TTAAGGCTTAAATATGGAAA+CGG	-	chr5_4:29432628-29432647	Msa0847440:intron	25.0%
!	AGGATTAAAACAAAATACCA+AGG	+	chr5_4:29432715-29432734	None:intergenic	25.0%
!	CCCTGCAAATATAAAAAATT+TGG	+	chr5_4:29432890-29432909	None:intergenic	25.0%
!!!	GTCCCTGTAAAAATATTTTT+TGG	+	chr5_4:29432921-29432940	None:intergenic	25.0%
!!	TCTGTAAATATCTGACATTT+TGG	+	chr5_4:29432949-29432968	None:intergenic	25.0%
!	ACATCTTATCTTATCATTCT+CGG	+	chr5_4:29433073-29433092	None:intergenic	25.0%
!	ATGTGAGAATATATCTATGA+AGG	-	chr5_4:29433089-29433108	Msa0847440:intron	25.0%
!	AAATAACAATCACCATTGAT+TGG	+	chr5_4:29433156-29433175	None:intergenic	25.0%
!!	AACACAAATTTTTGCATTAG+CGG	+	chr5_4:29433249-29433268	None:intergenic	25.0%
!!	ATTTACACGCACAATTTTAA+GGG	-	chr5_4:29433336-29433355	Msa0847440:intron	25.0%
!	AAGAGACTATCCTAAAAAAT+TGG	+	chr5_4:29433391-29433410	None:intergenic	25.0%
!	TTTATAGAGACTAAATTGAG+GGG	+	chr5_4:29433434-29433453	None:intergenic	25.0%
!!	CTTTTATAGAGACTAAATTG+AGG	+	chr5_4:29433436-29433455	None:intergenic	25.0%
!	AAAGATGATATTTGAATTGG+TGG	+	chr5_4:29433855-29433874	None:intergenic	25.0%
!	ACCAATTCAAATATCATCTT+TGG	-	chr5_4:29433854-29433873	Msa0847440:intron	25.0%
!	TCCAAAGATGATATTTGAAT+TGG	+	chr5_4:29433858-29433877	None:intergenic	25.0%
!	GTTGGAAATTCATTTGATAT+TGG	-	chr5_4:29433909-29433928	Msa0847440:intron	25.0%
!	AATTGTTCATTCATCAACAA+CGG	+	chr5_4:29434020-29434039	None:intergenic	25.0%
!	CTTTCTCTTATAAATAGGAT+TGG	+	chr5_4:29434669-29434688	None:intergenic	25.0%
!	TCCTATTTATAAGAGAAAGT+TGG	-	chr5_4:29434670-29434689	Msa0847440:intron	25.0%
!	CCTATTTATAAGAGAAAGTT+GGG	-	chr5_4:29434671-29434690	Msa0847440:intron	25.0%
	TTACTTCTTTGAATCTCGTT+AGG	+	chr5_4:29431532-29431551	None:intergenic	30.0%
!!!	TGCAACTTTTGTTTTTCATC+AGG	+	chr5_4:29431726-29431745	None:intergenic	30.0%
!!!	GATTTTGGTTTCAGAACAAA+AGG	-	chr5_4:29431784-29431803	Msa0847440:CDS	30.0%
	CAAAAGTAATAGGATTGCAT+TGG	-	chr5_4:29432065-29432084	Msa0847440:CDS	30.0%
!!!	ATTTTTTTGGTTTTGGTCCT+TGG	-	chr5_4:29432695-29432714	Msa0847440:intron	30.0%
!!	TCATTTTAGTCCTCATTTTG+AGG	-	chr5_4:29432774-29432793	Msa0847440:intron	30.0%
!!	CATTTTAGTCCTCATTTTGA+GGG	-	chr5_4:29432775-29432794	Msa0847440:intron	30.0%
	AGGACTAAAACAAAATACCA+AGG	-	chr5_4:29432857-29432876	Msa0847440:intron	30.0%
!!!	AAAAATTTGGTTTTGGTCCT+TGG	+	chr5_4:29432877-29432896	None:intergenic	30.0%
!!!	GGTTTTGATTTGAACAAAAC+AGG	-	chr5_4:29433011-29433030	Msa0847440:intron	30.0%
	AAATGATAACCGTTCACTAA+GGG	-	chr5_4:29433047-29433066	Msa0847440:intron	30.0%
!	CATTTACACGCACAATTTTA+AGG	-	chr5_4:29433335-29433354	Msa0847440:intron	30.0%
!	AATTTAAAATTGTGGCTGCA+TGG	-	chr5_4:29433545-29433564	Msa0847440:intron	30.0%
!	ATTTAAAATTGTGGCTGCAT+GGG	-	chr5_4:29433546-29433565	Msa0847440:intron	30.0%
!!	AATATAAAGATTTTGACCCG+AGG	+	chr5_4:29433644-29433663	None:intergenic	30.0%
	AGCATTATATCTGAATACAC+TGG	-	chr5_4:29433801-29433820	Msa0847440:intron	30.0%
	ATCATCTTTGGATTCAACAA+TGG	-	chr5_4:29433866-29433885	Msa0847440:intron	30.0%
	TCATCTTTGGATTCAACAAT+GGG	-	chr5_4:29433867-29433886	Msa0847440:intron	30.0%
	AACAATTACCTCAACAATCA+TGG	-	chr5_4:29434033-29434052	Msa0847440:intron	30.0%
	ACATCTAAATCTAAATGTGG+GGG	+	chr5_4:29434146-29434165	None:intergenic	30.0%
	GACATCTAAATCTAAATGTG+GGG	+	chr5_4:29434147-29434166	None:intergenic	30.0%
	GGACATCTAAATCTAAATGT+GGG	+	chr5_4:29434148-29434167	None:intergenic	30.0%
	TGGACATCTAAATCTAAATG+TGG	+	chr5_4:29434149-29434168	None:intergenic	30.0%
!	GTCCAAAATCATATTTTCTC+AGG	-	chr5_4:29434164-29434183	Msa0847440:intron	30.0%
!	CACCTGAGAAAATATGATTT+TGG	+	chr5_4:29434169-29434188	None:intergenic	30.0%
!!	CTTGATGATGTAATTGAAAC+TGG	+	chr5_4:29434419-29434438	None:intergenic	30.0%
	GATCATTCTTGAATAGCATT+TGG	-	chr5_4:29434521-29434540	Msa0847440:CDS	30.0%
	ACCTGAAGATATTCAAAAGA+TGG	-	chr5_4:29434561-29434580	Msa0847440:CDS	30.0%
	CCTGAAGATATTCAAAAGAT+GGG	-	chr5_4:29434562-29434581	Msa0847440:CDS	30.0%
!!!	TTGGAAGGAGTATTACATTT+TGG	+	chr5_4:29434650-29434669	None:intergenic	30.0%
	CTCTTATAAATAGGATTGGA+AGG	+	chr5_4:29434665-29434684	None:intergenic	30.0%
	CCCAACTTTCTCTTATAAAT+AGG	+	chr5_4:29434674-29434693	None:intergenic	30.0%
!!	TCAACAAAAGTTGATGTATC+TGG	-	chr5_4:29434694-29434713	Msa0847440:intron	30.0%
!!	TTAACGAAAGTTGATGAATC+TGG	+	chr5_4:29434733-29434752	None:intergenic	30.0%
!!	TCAAGCTTTTCAAGCTGATT+CGG	+	chr5_4:29431583-29431602	None:intergenic	35.0%
!	GTTATGGTCAGATCAGATTT+TGG	-	chr5_4:29431769-29431788	Msa0847440:CDS	35.0%
	GATTGCATTGGATTCAACAA+TGG	-	chr5_4:29432077-29432096	Msa0847440:CDS	35.0%
	GACAAGTATTATGAAACGGA+GGG	+	chr5_4:29432109-29432128	None:intergenic	35.0%
!!!	TTCACAATACATGTCGCTTT+TGG	+	chr5_4:29432363-29432382	None:intergenic	35.0%
	AAGCGACATGTATTGTGAAA+CGG	-	chr5_4:29432364-29432383	Msa0847440:CDS	35.0%
	CAAAACGCCAAATATTTGCA+GGG	+	chr5_4:29432655-29432674	None:intergenic	35.0%
!!	GATTTTAGTCCCTCAAAATG+AGG	+	chr5_4:29432787-29432806	None:intergenic	35.0%
	GAAATGATAACCGTTCACTA+AGG	-	chr5_4:29433046-29433065	Msa0847440:intron	35.0%
!	GGGGCAGATTAAATTTTCTA+GGG	+	chr5_4:29433118-29433137	None:intergenic	35.0%
!	AGGGGCAGATTAAATTTTCT+AGG	+	chr5_4:29433119-29433138	None:intergenic	35.0%
	AAATGCTCTACTCAAAGAAG+AGG	-	chr5_4:29433200-29433219	Msa0847440:CDS	35.0%
!	TTTAAAATTGTGGCTGCATG+GGG	-	chr5_4:29433547-29433566	Msa0847440:intron	35.0%
	GGGTGTGAACATTTATATTG+TGG	-	chr5_4:29433568-29433587	Msa0847440:intron	35.0%
!	TACACTGGAAGATCAGTTTT+AGG	-	chr5_4:29433816-29433835	Msa0847440:intron	35.0%
!	ACACTGGAAGATCAGTTTTA+GGG	-	chr5_4:29433817-29433836	Msa0847440:intron	35.0%
	GATATTTGAATTGGTGGAAC+TGG	+	chr5_4:29433849-29433868	None:intergenic	35.0%
	CATCTTTGGATTCAACAATG+GGG	-	chr5_4:29433868-29433887	Msa0847440:intron	35.0%
	TTGCATTGCACTAAAGGAAA+AGG	-	chr5_4:29433957-29433976	Msa0847440:intron	35.0%
	GCAATATTCTGGACAAGATT+CGG	-	chr5_4:29434112-29434131	Msa0847440:intron	35.0%
	TAGAAGATCAGATGAATCGA+AGG	+	chr5_4:29434195-29434214	None:intergenic	35.0%
	TAGAAGATCAGATGAATCGA+TGG	+	chr5_4:29434195-29434214	None:intergenic	35.0%
	TAGAAGATCAGATGAATCGA+TGG	+	chr5_4:29434195-29434214	None:intergenic	35.0%
	ACAATGCAATTAGGGGAATT+TGG	-	chr5_4:29434359-29434378	Msa0847440:intron	35.0%
!	CCCATCTTTTGAATATCTTC+AGG	+	chr5_4:29434565-29434584	None:intergenic	35.0%
	TCAAAAGATGGGATAACAAG+CGG	-	chr5_4:29434573-29434592	Msa0847440:CDS	35.0%
	AAGCGGGAGAAATACATTAA+GGG	-	chr5_4:29434590-29434609	Msa0847440:CDS	35.0%
!	GAGAAATACATTAAGGGCAT+TGG	-	chr5_4:29434596-29434615	Msa0847440:CDS	35.0%
	CAATCTTACCACATTGTTTC+TGG	-	chr5_4:29434620-29434639	Msa0847440:intron	35.0%
	CGACAAGTATTATGAAACGG+AGG	+	chr5_4:29432110-29432129	None:intergenic	40.0%
	AAACGGTCCCTGCAAATATT+TGG	-	chr5_4:29432645-29432664	Msa0847440:intron	40.0%
	CCAAAACGCCAAATATTTGC+AGG	+	chr5_4:29432656-29432675	None:intergenic	40.0%
!	CCTGCAAATATTTGGCGTTT+TGG	-	chr5_4:29432653-29432672	Msa0847440:intron	40.0%
	GAAAATTTAATCTGCCCCTC+TGG	-	chr5_4:29433120-29433139	Msa0847440:CDS	40.0%
	TTAAAATTGTGGCTGCATGG+GGG	-	chr5_4:29433548-29433567	Msa0847440:intron	40.0%
	ATTTGAATTGGTGGAACTGG+TGG	+	chr5_4:29433846-29433865	None:intergenic	40.0%
!	GATTCAACAATGGGGAGTAT+TGG	-	chr5_4:29433876-29433895	Msa0847440:intron	40.0%
!	AGTATTGGACAAGGATTGGT+TGG	-	chr5_4:29433891-29433910	Msa0847440:intron	40.0%
	TAGTGCAATGCAACGATGAA+TGG	+	chr5_4:29433950-29433969	None:intergenic	40.0%
	TCATCGTTGCATTGCACTAA+AGG	-	chr5_4:29433951-29433970	Msa0847440:intron	40.0%
	CCACTACTTGGTAAACTTGA+TGG	+	chr5_4:29433996-29434015	None:intergenic	40.0%
	CCATCAAGTTTACCAAGTAG+TGG	-	chr5_4:29433993-29434012	Msa0847440:intron	40.0%
	ACCTGCATACTTTGATACCT+CGG	+	chr5_4:29434062-29434081	None:intergenic	40.0%
	AGATCAGATGAATCGAAGGT+GGG	+	chr5_4:29434221-29434240	None:intergenic	40.0%
	AAGATCAGATGAATCGAAGG+TGG	+	chr5_4:29434222-29434241	None:intergenic	40.0%
	AGATCAGATGAATCGATGGT+GGG	+	chr5_4:29434251-29434270	None:intergenic	40.0%
	AAGATCAGATGAATCGATGG+TGG	+	chr5_4:29434252-29434271	None:intergenic	40.0%
	AGATCAGATGAATCGATGGT+GGG	+	chr5_4:29434251-29434270	None:intergenic	40.0%
	AAGATCAGATGAATCGATGG+TGG	+	chr5_4:29434252-29434271	None:intergenic	40.0%
	TAATTGCATTGTCGAAGCAC+CGG	+	chr5_4:29434351-29434370	None:intergenic	40.0%
	GTGCTTCGACAATGCAATTA+GGG	-	chr5_4:29434351-29434370	Msa0847440:intron	40.0%
	TGCTTCGACAATGCAATTAG+GGG	-	chr5_4:29434352-29434371	Msa0847440:intron	40.0%
	ATTAGGGGAATTTGGATTCG+AGG	-	chr5_4:29434367-29434386	Msa0847440:intron	40.0%
	TTAGGGGAATTTGGATTCGA+GGG	-	chr5_4:29434368-29434387	Msa0847440:intron	40.0%
	CAAAAGATGGGATAACAAGC+GGG	-	chr5_4:29434574-29434593	Msa0847440:CDS	40.0%
	CAAGCGGGAGAAATACATTA+AGG	-	chr5_4:29434589-29434608	Msa0847440:CDS	40.0%
	TTGGTTGTCCAGAAACAATG+TGG	+	chr5_4:29434631-29434650	None:intergenic	40.0%
!	TGAATCTCGTTAGGAGTGTG+AGG	+	chr5_4:29431523-29431542	None:intergenic	45.0%
	GAACAAAAGGGTTCAGACCA+AGG	-	chr5_4:29431797-29431816	Msa0847440:CDS	45.0%
	CGACATGTATTGTGAAACGG+AGG	-	chr5_4:29432367-29432386	Msa0847440:CDS	45.0%
	AATTTAATCTGCCCCTCTGG+TGG	-	chr5_4:29433123-29433142	Msa0847440:CDS	45.0%
!	GAGTGTCGTTGTGAAAACCT+CGG	-	chr5_4:29433624-29433643	Msa0847440:intron	45.0%
!	AGTGTCGTTGTGAAAACCTC+GGG	-	chr5_4:29433625-29433644	Msa0847440:intron	45.0%
	TATTGCGACCACAACTGCAA+TGG	-	chr5_4:29433660-29433679	Msa0847440:intron	45.0%
	ATTGCGACCACAACTGCAAT+GGG	-	chr5_4:29433661-29433680	Msa0847440:intron	45.0%
!!	ACAATGGGGAGTATTGGACA+AGG	-	chr5_4:29433882-29433901	Msa0847440:intron	45.0%
	ATCAACAACGGACCACTACT+TGG	+	chr5_4:29434008-29434027	None:intergenic	45.0%
!	TCCGAGGTATCAAAGTATGC+AGG	-	chr5_4:29434058-29434077	Msa0847440:intron	45.0%
	AGTATGCAGGTCGATACCTT+TGG	-	chr5_4:29434071-29434090	Msa0847440:intron	45.0%
	ATGTCGCATGCGCAATATTC+TGG	-	chr5_4:29434101-29434120	Msa0847440:intron	45.0%
	GATCAGATGAATCGAAGGTG+GGG	+	chr5_4:29434220-29434239	None:intergenic	45.0%
	GATCAGATGAATCGATGGTG+GGG	+	chr5_4:29434250-29434269	None:intergenic	45.0%
	GATCAGATGAATCGATGGTG+GGG	+	chr5_4:29434250-29434269	None:intergenic	45.0%
	CTAATGAAGTGGTGTAACCC+GGG	+	chr5_4:29434322-29434341	None:intergenic	45.0%
	CCTAATGAAGTGGTGTAACC+CGG	+	chr5_4:29434323-29434342	None:intergenic	45.0%
	ACCACTTCATTAGGTGAGAC+CGG	-	chr5_4:29434329-29434348	Msa0847440:intron	45.0%
	GGTGCTTCGACAATGCAATT+AGG	-	chr5_4:29434350-29434369	Msa0847440:intron	45.0%
	GAAACTGGTACTTACTCCCA+CGG	+	chr5_4:29434404-29434423	None:intergenic	45.0%
!!	TCATATAATTTAAAAATAAA+AGG	+	chr5_4:29434475-29434494	None:intergenic	5.0%
	GAGTATCAGAGTGGAGGATG+TGG	-	chr5_4:29431457-29431476	Msa0847440:three_prime_UTR	50.0%
!!	TCAAGCTGATTCGGAGTGTG+AGG	+	chr5_4:29431574-29431593	None:intergenic	50.0%
	CATTCTCGGCCCTTAGTGAA+CGG	+	chr5_4:29433059-29433078	None:intergenic	50.0%
	ATTGGACGACAACCACCAGA+GGG	+	chr5_4:29433138-29433157	None:intergenic	50.0%
	GGTGGTTGTCGTCCAATCAA+TGG	-	chr5_4:29433141-29433160	Msa0847440:CDS	50.0%
!!	GGGGAGTATTGGACAAGGAT+TGG	-	chr5_4:29433887-29433906	Msa0847440:intron	50.0%
	CTCGGAGTCCATGATTGTTG+AGG	+	chr5_4:29434044-29434063	None:intergenic	50.0%
	CTCAACAATCATGGACTCCG+AGG	-	chr5_4:29434042-29434061	Msa0847440:intron	50.0%
	ATGCGACATTGCGTTGCCAA+AGG	+	chr5_4:29434090-29434109	None:intergenic	50.0%
	CCGGGTTACACCACTTCATT+AGG	-	chr5_4:29434320-29434339	Msa0847440:intron	50.0%
	ACCGGTCTCACCTAATGAAG+TGG	+	chr5_4:29434333-29434352	None:intergenic	50.0%
!!	TCGAGGGTTTTGATGATCCG+TGG	-	chr5_4:29434384-29434403	Msa0847440:intron	50.0%
!!	CGAGGGTTTTGATGATCCGT+GGG	-	chr5_4:29434385-29434404	Msa0847440:intron	50.0%
!!	GCTGATTCGGAGTGTGAGGA+CGG	+	chr5_4:29431570-29431589	None:intergenic	55.0%
	TTGGACGACAACCACCAGAG+GGG	+	chr5_4:29433137-29433156	None:intergenic	55.0%
	GATTGGACGACAACCACCAG+AGG	+	chr5_4:29433139-29433158	None:intergenic	55.0%
	GCGGTCACCCATTGCAGTTG+TGG	+	chr5_4:29433671-29433690	None:intergenic	60.0%
	TCTACTCCCCACCACTGTCC+CGG	-	chr5_4:29434301-29434320	Msa0847440:intron	60.0%
	TGTAACCCGGGACAGTGGTG+GGG	+	chr5_4:29434310-29434329	None:intergenic	60.0%
	GTGTAACCCGGGACAGTGGT+GGG	+	chr5_4:29434311-29434330	None:intergenic	60.0%
	AGTGGTGTAACCCGGGACAG+TGG	+	chr5_4:29434315-29434334	None:intergenic	60.0%
	CTACTCCCCACCACTGTCCC+GGG	-	chr5_4:29434302-29434321	Msa0847440:intron	65.0%
	GGTGTAACCCGGGACAGTGG+TGG	+	chr5_4:29434312-29434331	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr5_4	gene	29431454	29434884	29431454	ID=Msa0847440;Name=Msa0847440
chr5_4	mRNA	29431454	29434884	29431454	ID=Msa0847440-mRNA-1;Parent=Msa0847440;Name=Msa0847440-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0\|0.5\|0.2\|1\|1\|1\|5\|296\|382
chr5_4	exon	29431454	29431816	29431454	ID=Msa0847440-mRNA-1:exon:10920;Parent=Msa0847440-mRNA-1
chr5_4	exon	29431930	29432552	29431930	ID=Msa0847440-mRNA-1:exon:10919;Parent=Msa0847440-mRNA-1
chr5_4	exon	29433117	29433305	29433117	ID=Msa0847440-mRNA-1:exon:10918;Parent=Msa0847440-mRNA-1
chr5_4	exon	29434520	29434637	29434520	ID=Msa0847440-mRNA-1:exon:10917;Parent=Msa0847440-mRNA-1
chr5_4	exon	29434733	29434884	29434733	ID=Msa0847440-mRNA-1:exon:10916;Parent=Msa0847440-mRNA-1
chr5_4	CDS	29434733	29434884	29434733	ID=Msa0847440-mRNA-1:cds;Parent=Msa0847440-mRNA-1
chr5_4	CDS	29434520	29434637	29434520	ID=Msa0847440-mRNA-1:cds;Parent=Msa0847440-mRNA-1
chr5_4	CDS	29433117	29433305	29433117	ID=Msa0847440-mRNA-1:cds;Parent=Msa0847440-mRNA-1
chr5_4	CDS	29431930	29432552	29431930	ID=Msa0847440-mRNA-1:cds;Parent=Msa0847440-mRNA-1
chr5_4	CDS	29431750	29431816	29431750	ID=Msa0847440-mRNA-1:cds;Parent=Msa0847440-mRNA-1
chr5_4	three_prime_UTR	29431454	29431749	29431454	ID=Msa0847440-mRNA-1:three_prime_utr;Parent=Msa0847440-mRNA-1

Gene Sequence

>Msa0847440

ATGGAGTATCAGAGTGGAGGATGTGGTTCTTTTGATTCTCAAAGTAAGAAAAAACGTTATCGTCGTCCTCACACTCCTAACGAGATTCAAAGAAGTAAGAAGAAACGTTATCGCCGTCCTCACACTCCGAATCAGCTTGAAAAGCTTGAAGAGGTGTTTAAGGAGTGTCCAAAACCTGATGAAAAACAAAAGTTGCAATTAAGCAAAGAATTAGCTTTGAGTTATGGTCAGATCAGATTTTGGTTTCAGAACAAAAGGGTTCAGACCAAGGCAAAACTTGAAAGAAATGATAACCGTTCACTAAGGGCCGAGAATGATAAGATAAGATGTGAGAATATATCTATGAAGGAAGCCCTAGAAAATTTAATCTGCCCCTCTGGTGGTTGTCGTCCAATCAATGGTGATTGTTATTTTGATAGAAAAAGGTTGAGATTTGAAAATGCTCTACTCAAAGAAGAGCTTTATAAAGAATCTAGCATTATATCTGAATACACTGGAAGATCAGTTTTAGGGTTTCCACCAGTTCCACCAATTCAAATATCATCTTTGGATTCAACAATGGGGAGTATTGGACAAGGATTGGTTGGAAATTCATTTGATATTGGTGAAATTCATAACAACCATTCATCGTTGCATTGCACTAAAGGAAAAGGAAAACTCTTCAATCCATCAAGTTTACCAAGTAGTGGTCCGTTGTTGATGAATGAACAATTACCTCAACAATCATGGACTCCGAGGTATCAAAGTATGCAGGTCGATACCTTTGGCAACGCAATGTCGCATGCGCAATATTCTGGACAAGATTCGGCAATTGTGCCCCCACATTTAGATTTAGATGTCCAAAATCATATTTTCTCAGGTGTCAATATCGATTCATCTGATCTTCTACTCCCCACCTTCGATTCATCTGATCTTCTACTCCCCACCATCGATTCATCTGATCTTCTACTCCCCACCATCGATTCATCTGATCTTCTACTCCCCACCACTGTCCCGGGTTACACCACTTCATTAGGTGAGACCGGTGCTTCGACAATGCAATTAGGGGAATTTGGATTCGAGGGTTTTGATGATCCGTGGGAATCATTCTTGAATAGCATTTGGCATAATGAAATACTTTCACCTGAAGATATTCAAAAGATGGGATAA

Protein sequence

>Msa0847440

MEYQSGGCGSFDSQSKKKRYRRPHTPNEIQRSKKKRYRRPHTPNQLEKLEEVFKECPKPDEKQKLQLSKELALSYGQIRFWFQNKRVQTKAKLERNDNRSLRAENDKIRCENISMKEALENLICPSGGCRPINGDCYFDRKRLRFENALLKEELYKESSIISEYTGRSVLGFPPVPPIQISSLDSTMGSIGQGLVGNSFDIGEIHNNHSSLHCTKGKGKLFNPSSLPSSGPLLMNEQLPQQSWTPRYQSMQVDTFGNAMSHAQYSGQDSAIVPPHLDLDVQNHIFSGVNIDSSDLLLPTFDSSDLLLPTIDSSDLLLPTIDSSDLLLPTTVPGYTTSLGETGASTMQLGEFGFEGFDDPWESFLNSIWHNEILSPEDIQKMG*