Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0848460 | XP_013454167.1 | 98.095 | 210 | 4 | 0 | 12 | 221 | 25 | 234 | 2.23e-151 | 430 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0848460 | sp|O22922|RU2B1_ARATH | 68.868 | 212 | 60 | 3 | 12 | 221 | 25 | 232 | 2.97e-107 | 311 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0848460 | I3SFF7 | 98.095 | 210 | 4 | 0 | 12 | 221 | 25 | 234 | 1.07e-151 | 430 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0076000 | Msa0848460 | 0.815626 | 8.395984e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0848460 | MtrunA17_Chr5g0432171 | 98.095 | 210 | 4 | 0 | 12 | 221 | 25 | 234 | 2.05e-155 | 430 |
| Msa0848460 | MtrunA17_Chr1g0176901 | 94.944 | 178 | 8 | 1 | 44 | 221 | 2 | 178 | 1.65e-111 | 317 |
| Msa0848460 | MtrunA17_Chr4g0044291 | 57.273 | 220 | 88 | 1 | 8 | 221 | 25 | 244 | 4.10e-90 | 265 |
| Msa0848460 | MtrunA17_Chr7g0269401 | 57.764 | 161 | 57 | 4 | 70 | 221 | 3 | 161 | 7.74e-56 | 175 |
| Msa0848460 | MtrunA17_Chr7g0269411 | 58.209 | 67 | 28 | 0 | 8 | 74 | 25 | 91 | 1.22e-24 | 93.6 |
| Msa0848460 | MtrunA17_Chr4g0044321 | 56.923 | 65 | 28 | 0 | 8 | 72 | 25 | 89 | 1.38e-19 | 86.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0848460 | AT2G30260.1 | 68.868 | 212 | 60 | 3 | 12 | 221 | 25 | 232 | 3.02e-108 | 311 |
| Msa0848460 | AT1G06960.1 | 71.905 | 210 | 54 | 2 | 12 | 221 | 25 | 229 | 3.21e-105 | 303 |
| Msa0848460 | AT1G06960.3 | 69.849 | 199 | 55 | 2 | 23 | 221 | 7 | 200 | 1.21e-95 | 278 |
| Msa0848460 | AT2G47580.1 | 54.709 | 223 | 91 | 3 | 8 | 221 | 29 | 250 | 1.01e-75 | 229 |
| Msa0848460 | AT1G06960.4 | 65.789 | 152 | 47 | 2 | 70 | 221 | 4 | 150 | 3.61e-61 | 188 |
| Msa0848460 | AT2G30260.2 | 70.940 | 117 | 29 | 1 | 12 | 128 | 25 | 136 | 2.95e-56 | 176 |
| Msa0848460 | AT1G06960.2 | 78.899 | 109 | 23 | 0 | 12 | 120 | 25 | 133 | 1.33e-54 | 172 |
| Msa0848460 | AT1G06960.5 | 84.810 | 79 | 12 | 0 | 12 | 90 | 25 | 103 | 7.87e-47 | 152 |
| Msa0848460 | AT1G06960.6 | 75.510 | 98 | 24 | 0 | 23 | 120 | 7 | 104 | 3.34e-45 | 147 |
Find 55 sgRNAs with CRISPR-Local
Find 279 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTCAATATGGAAGGATTT+TGG | 0.143011 | 5_4:-32964705 | Msa0848460:CDS |
| GCAAAATTTGCTTTGAATAT+TGG | 0.195857 | 5_4:+32961146 | None:intergenic |
| CATCTGTCGCACTGCATTAC+TGG | 0.268948 | 5_4:+32964613 | None:intergenic |
| TGCAGAAGTTGTAAGTTTAC+AGG | 0.291868 | 5_4:-32961089 | Msa0848460:three_prime_UTR |
| TATTGCTTATTCTCTCAATA+TGG | 0.294966 | 5_4:-32964716 | Msa0848460:CDS |
| CTTAGCAAAGTTTATAATCA+TGG | 0.324640 | 5_4:+32961193 | None:intergenic |
| CTCTATGAACAAAATATTGT+TGG | 0.365120 | 5_4:+32961397 | None:intergenic |
| TGTTGGGAGCAGCTGCCTCT+TGG | 0.368601 | 5_4:+32961414 | None:intergenic |
| GTTGGGAGCAGCTGCCTCTT+GGG | 0.371933 | 5_4:+32961415 | None:intergenic |
| GCACCATGTGTTCCACCATT+AGG | 0.384777 | 5_4:+32961963 | None:intergenic |
| GCCTCATTCCGTCCAGGGTC+AGG | 0.385719 | 5_4:-32961440 | Msa0848460:CDS |
| GCCTCTTGGGCACCTGACCC+TGG | 0.419578 | 5_4:+32961428 | None:intergenic |
| AAACAATCTTCTGTGCCTAA+TGG | 0.424244 | 5_4:-32961978 | Msa0848460:CDS |
| TCTCAGTTACTTTGTAAACT+AGG | 0.426990 | 5_4:-32960939 | Msa0848460:three_prime_UTR |
| TGAGAAATCTATCACATTTG+TGG | 0.431750 | 5_4:-32961041 | Msa0848460:three_prime_UTR |
| ACAATCATCCATGGCAATGC+AGG | 0.453318 | 5_4:-32961249 | Msa0848460:CDS |
| TCTATGAACAAAATATTGTT+GGG | 0.458630 | 5_4:+32961398 | None:intergenic |
| GACGCCTAAGCTTCGAGGAC+AGG | 0.460104 | 5_4:-32964666 | Msa0848460:CDS |
| AGAGGGAAGCTTTGTTCCAA+GGG | 0.460175 | 5_4:-32964016 | Msa0848460:CDS |
| CGCTTGATCGAAGCAAAGCC+AGG | 0.463784 | 5_4:-32961302 | Msa0848460:CDS |
| GAGAAATCTATCACATTTGT+GGG | 0.464095 | 5_4:-32961040 | Msa0848460:three_prime_UTR |
| TTAGCAAAGTTTATAATCAT+GGG | 0.465775 | 5_4:+32961194 | None:intergenic |
| CATGCCTGTCCTCGAAGCTT+AGG | 0.475388 | 5_4:+32964662 | None:intergenic |
| ACCTGACCCTGGACGGAATG+AGG | 0.490324 | 5_4:+32961439 | None:intergenic |
| AAGCGCACTTCCTTAAAACC+TGG | 0.502688 | 5_4:+32961320 | None:intergenic |
| CAGCAGGCCTCATTCCGTCC+AGG | 0.503368 | 5_4:-32961446 | Msa0848460:CDS |
| CTAAAGACGCCTAAGCTTCG+AGG | 0.510089 | 5_4:-32964671 | Msa0848460:CDS |
| AAGAGGGAAGCTTTGTTCCA+AGG | 0.510421 | 5_4:-32964017 | Msa0848460:CDS |
| ATCCTGCCGGTAGTTTCATA+AGG | 0.510992 | 5_4:+32961368 | None:intergenic |
| GCTTATTCTCTCAATATGGA+AGG | 0.527328 | 5_4:-32964712 | Msa0848460:CDS |
| AAATCTACAAATGCGATACC+TGG | 0.531054 | 5_4:+32961284 | None:intergenic |
| TGATGTCTATTGATTGTATG+TGG | 0.531571 | 5_4:-32960992 | Msa0848460:three_prime_UTR |
| CTTGGGCACCTGACCCTGGA+CGG | 0.532505 | 5_4:+32961432 | None:intergenic |
| CATTGACCTAGACAATGCTA+TGG | 0.547222 | 5_4:-32960890 | Msa0848460:three_prime_UTR |
| CAATCTTCTGTGCCTAATGG+TGG | 0.560473 | 5_4:-32961975 | Msa0848460:CDS |
| TGCCTTATGAAACTACCGGC+AGG | 0.562261 | 5_4:-32961370 | Msa0848460:CDS |
| ATGGCAATGCAGGCTCTACA+AGG | 0.563519 | 5_4:-32961239 | Msa0848460:CDS |
| TAAGCTTCGAGGACAGGCAT+GGG | 0.574433 | 5_4:-32964660 | Msa0848460:CDS |
| AGCAGGCCTCATTCCGTCCA+GGG | 0.576527 | 5_4:-32961445 | Msa0848460:CDS |
| CTAAGCTTCGAGGACAGGCA+TGG | 0.581122 | 5_4:-32964661 | Msa0848460:CDS |
| GATTGTATTGCTAAAGAAGA+GGG | 0.592319 | 5_4:-32964033 | Msa0848460:CDS |
| GAGCATTTCGAGCATCCTGC+CGG | 0.593424 | 5_4:+32961355 | None:intergenic |
| TTGTAGAGCCTGCATTGCCA+TGG | 0.596181 | 5_4:+32961241 | None:intergenic |
| GGAAGTTAGATTAAAGTAGA+CGG | 0.596942 | 5_4:-32961068 | Msa0848460:three_prime_UTR |
| AGCGCACTTCCTTAAAACCT+GGG | 0.597463 | 5_4:+32961321 | None:intergenic |
| GTGCCTAATGGTGGAACACA+TGG | 0.600600 | 5_4:-32961966 | Msa0848460:CDS |
| ATGCTCTTCGAACAATACCC+AGG | 0.603681 | 5_4:-32961338 | Msa0848460:CDS |
| TCCAGGGTCAGGTGCCCAAG+AGG | 0.611541 | 5_4:-32961429 | Msa0848460:CDS |
| TGTTCTATTTGTTGTCGTTG+TGG | 0.614348 | 5_4:-32964759 | Msa0848460:CDS |
| GGGAAGATTGAGATAGTGCT+TGG | 0.619587 | 5_4:-32961020 | Msa0848460:three_prime_UTR |
| AGATGAGGCACAATCATCCA+TGG | 0.621792 | 5_4:-32961258 | Msa0848460:CDS |
| AATTTGCCTTATGAAACTAC+CGG | 0.623907 | 5_4:-32961374 | Msa0848460:CDS |
| GGAACACATGGTGCAAGTAA+TGG | 0.626001 | 5_4:-32961954 | Msa0848460:CDS |
| AGATTGTATTGCTAAAGAAG+AGG | 0.631624 | 5_4:-32964034 | Msa0848460:CDS |
| ACACATGGTGCAAGTAATGG+TGG | 0.721642 | 5_4:-32961951 | Msa0848460:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGTATATACTTTATATTTTA+AGG | - | chr5_4:32963112-32963131 | Msa0848460:intron | 10.0% |
| !! | AAATAATAATTCAAAAAGTG+AGG | + | chr5_4:32961713-32961732 | None:intergenic | 15.0% |
| !!! | TCACTTTTTGAATTATTATT+TGG | - | chr5_4:32961712-32961731 | Msa0848460:intron | 15.0% |
| !!! | CACTTTTTGAATTATTATTT+GGG | - | chr5_4:32961713-32961732 | Msa0848460:intron | 15.0% |
| !!! | CTAATATTTTCTATCATTTT+TGG | + | chr5_4:32961862-32961881 | None:intergenic | 15.0% |
| !! | CAAAAATGATAGAAAATATT+AGG | - | chr5_4:32961860-32961879 | Msa0848460:intron | 15.0% |
| !! | AAATTAATGTTTAGTACAAA+AGG | + | chr5_4:32962381-32962400 | None:intergenic | 15.0% |
| !! | TAATAATCAACATAGATTAA+AGG | + | chr5_4:32963722-32963741 | None:intergenic | 15.0% |
| !!! | GAATTATTGGTTAAACATTA+TGG | - | chr5_4:32961264-32961283 | Msa0848460:CDS | 20.0% |
| !!! | ATATTATGTTTAGCTTTCTT+TGG | - | chr5_4:32961364-32961383 | Msa0848460:CDS | 20.0% |
| !! | ATTTAACAAAATTAGAGAAG+AGG | + | chr5_4:32962568-32962587 | None:intergenic | 20.0% |
| !!! | TTCTCTAATTTTGTTAAATG+TGG | - | chr5_4:32962569-32962588 | Msa0848460:intron | 20.0% |
| !!! | TCTCTAATTTTGTTAAATGT+GGG | - | chr5_4:32962570-32962589 | Msa0848460:intron | 20.0% |
| !!! | AAATTCATTATTTTGCAATG+TGG | - | chr5_4:32962897-32962916 | Msa0848460:intron | 20.0% |
| !! | ATAAATCATGTACACAAAAT+AGG | + | chr5_4:32963013-32963032 | None:intergenic | 20.0% |
| !!! | CTTTATATTTTAAGGATCTT+AGG | - | chr5_4:32963120-32963139 | Msa0848460:intron | 20.0% |
| !! | CATATTATAACAACATAGAT+TGG | - | chr5_4:32963285-32963304 | Msa0848460:intron | 20.0% |
| !! | TGTTAAACGTTGTTAAATAA+CGG | - | chr5_4:32963798-32963817 | Msa0848460:intron | 20.0% |
| !! | TCTATGAACAAAATATTGTT+GGG | + | chr5_4:32964238-32964257 | None:intergenic | 20.0% |
| !! | TTAGCAAAGTTTATAATCAT+GGG | + | chr5_4:32964442-32964461 | None:intergenic | 20.0% |
| ! | TATTGCTTATTCTCTCAATA+TGG | - | chr5_4:32960917-32960936 | Msa0848460:three_prime_UTR | 25.0% |
| !! | CCATAGGTTTTTCATAAAAT+GGG | + | chr5_4:32961054-32961073 | None:intergenic | 25.0% |
| !! | ACCATAGGTTTTTCATAAAA+TGG | + | chr5_4:32961055-32961074 | None:intergenic | 25.0% |
| ! | CAGTATAACTTTAATACCAT+AGG | + | chr5_4:32961070-32961089 | None:intergenic | 25.0% |
| ! | GTACACAAATTAACAGATAT+AGG | + | chr5_4:32961093-32961112 | None:intergenic | 25.0% |
| ! | TAATTTCTCTTAATGTCCAT+TGG | - | chr5_4:32961195-32961214 | Msa0848460:CDS | 25.0% |
| ! | TAACCAATAATTCTTACAAG+CGG | + | chr5_4:32961257-32961276 | None:intergenic | 25.0% |
| !!! | CTTTTTTTCGTATGAAGTTA+CGG | - | chr5_4:32961478-32961497 | Msa0848460:intron | 25.0% |
| !!! | TTTTTTTCGTATGAAGTTAC+GGG | - | chr5_4:32961479-32961498 | Msa0848460:intron | 25.0% |
| !!! | TTTTAGAAGCATATCATTGA+TGG | + | chr5_4:32961527-32961546 | None:intergenic | 25.0% |
| ! | TTCTAATGAATGACTAGTAT+TGG | + | chr5_4:32961839-32961858 | None:intergenic | 25.0% |
| ! | ATTGAGAGTAATATAAGAAG+AGG | - | chr5_4:32962037-32962056 | Msa0848460:intron | 25.0% |
| ! | TTGAGAGTAATATAAGAAGA+GGG | - | chr5_4:32962038-32962057 | Msa0848460:intron | 25.0% |
| ! | ATAATCCCTAATTTGAATGA+GGG | + | chr5_4:32963410-32963429 | None:intergenic | 25.0% |
| !! | CGTTAGTTTCTTTATTGAAT+TGG | - | chr5_4:32963556-32963575 | Msa0848460:intron | 25.0% |
| ! | TACGTAATATTGTGAAATAG+CGG | - | chr5_4:32963895-32963914 | Msa0848460:intron | 25.0% |
| ! | CAATTCACAACACTAAAATT+GGG | - | chr5_4:32963983-32964002 | Msa0848460:intron | 25.0% |
| ! | ATATGTTTCAATTTAACTCG+TGG | - | chr5_4:32964081-32964100 | Msa0848460:intron | 25.0% |
| ! | CTCTATGAACAAAATATTGT+TGG | + | chr5_4:32964239-32964258 | None:intergenic | 25.0% |
| !!! | ATTTGTAGATTTTGAAGATG+AGG | - | chr5_4:32964360-32964379 | Msa0848460:intron | 25.0% |
| !! | TTATAATCATGGGATTTTGA+GGG | + | chr5_4:32964432-32964451 | None:intergenic | 25.0% |
| !! | TTTATAATCATGGGATTTTG+AGG | + | chr5_4:32964433-32964452 | None:intergenic | 25.0% |
| ! | CTTAGCAAAGTTTATAATCA+TGG | + | chr5_4:32964443-32964462 | None:intergenic | 25.0% |
| !! | GCAAAATTTGCTTTGAATAT+TGG | + | chr5_4:32964490-32964509 | None:intergenic | 25.0% |
| ! | CCCATTTTATGAAAAACCTA+TGG | - | chr5_4:32961051-32961070 | Msa0848460:three_prime_UTR | 30.0% |
| AAAACGTGATAAAACACAAC+AGG | + | chr5_4:32961128-32961147 | None:intergenic | 30.0% | |
| !! | TTTGAAATCTTTTGTCCTGT+TGG | - | chr5_4:32961387-32961406 | Msa0848460:CDS | 30.0% |
| AAGAATGAGAATGAAAGATG+TGG | - | chr5_4:32961426-32961445 | Msa0848460:CDS | 30.0% | |
| !!! | TTTTTTCGTATGAAGTTACG+GGG | - | chr5_4:32961480-32961499 | Msa0848460:intron | 30.0% |
| AGATTGTATTGCTAAAGAAG+AGG | - | chr5_4:32961599-32961618 | Msa0848460:intron | 30.0% | |
| GATTGTATTGCTAAAGAAGA+GGG | - | chr5_4:32961600-32961619 | Msa0848460:intron | 30.0% | |
| AAAAAGAAACAAGAGGAGAA+AGG | - | chr5_4:32961645-32961664 | Msa0848460:intron | 30.0% | |
| TCAAAAAGTGAGGATGATTA+TGG | + | chr5_4:32961703-32961722 | None:intergenic | 30.0% | |
| TTCAGAGGGATAAATGATAA+TGG | + | chr5_4:32961758-32961777 | None:intergenic | 30.0% | |
| AACTTGCAAACAAAGACTAA+AGG | + | chr5_4:32961900-32961919 | None:intergenic | 30.0% | |
| ! | TTAGTCTTTGTTTGCAAGTT+AGG | - | chr5_4:32961900-32961919 | Msa0848460:intron | 30.0% |
| TTTGCAAGTTAGGAGATAAA+GGG | - | chr5_4:32961910-32961929 | Msa0848460:intron | 30.0% | |
| AGTAATATAAGAAGAGGGAA+AGG | - | chr5_4:32962043-32962062 | Msa0848460:intron | 30.0% | |
| !! | TGGGGTTTATTTTTCTTCAT+AGG | + | chr5_4:32962155-32962174 | None:intergenic | 30.0% |
| ATTGTGTCTCATATATTGCT+TGG | - | chr5_4:32962308-32962327 | Msa0848460:intron | 30.0% | |
| TCTCTACTCAACAAATTATG+AGG | + | chr5_4:32962523-32962542 | None:intergenic | 30.0% | |
| ! | CAAAATTAGAGAAGAGGTAT+AGG | + | chr5_4:32962562-32962581 | None:intergenic | 30.0% |
| ! | TTTTGAGCTAACCTATCATT+AGG | - | chr5_4:32962603-32962622 | Msa0848460:intron | 30.0% |
| !! | TTGGTTCTGATTGGTTTATT+TGG | - | chr5_4:32962728-32962747 | Msa0848460:intron | 30.0% |
| CATTGCAATCTCATTATCTT+CGG | + | chr5_4:32962807-32962826 | None:intergenic | 30.0% | |
| GATTGCAATGTTCTGTTATA+CGG | - | chr5_4:32962817-32962836 | Msa0848460:intron | 30.0% | |
| TAAACTCCCTCATTCAAATT+AGG | - | chr5_4:32963401-32963420 | Msa0848460:intron | 30.0% | |
| AAACTCCCTCATTCAAATTA+GGG | - | chr5_4:32963402-32963421 | Msa0848460:intron | 30.0% | |
| GATAATCCCTAATTTGAATG+AGG | + | chr5_4:32963411-32963430 | None:intergenic | 30.0% | |
| TTACGTACTAAATAGCGTAT+CGG | + | chr5_4:32963882-32963901 | None:intergenic | 30.0% | |
| ATATTGTGAAATAGCGGTTA+TGG | - | chr5_4:32963901-32963920 | Msa0848460:intron | 30.0% | |
| ! | AATAGCAGTTTGTTCAAACT+CGG | + | chr5_4:32963951-32963970 | None:intergenic | 30.0% |
| GCAATTCACAACACTAAAAT+TGG | - | chr5_4:32963982-32964001 | Msa0848460:intron | 30.0% | |
| AAATGTACTCTTATATCAGC+AGG | - | chr5_4:32964171-32964190 | Msa0848460:intron | 30.0% | |
| AATTTGCCTTATGAAACTAC+CGG | - | chr5_4:32964259-32964278 | Msa0848460:intron | 30.0% | |
| ! | TATAATCATGGGATTTTGAG+GGG | + | chr5_4:32964431-32964450 | None:intergenic | 30.0% |
| GGAAGTTAGATTAAAGTAGA+CGG | - | chr5_4:32964565-32964584 | Msa0848460:intron | 30.0% | |
| TGAGAAATCTATCACATTTG+TGG | - | chr5_4:32964592-32964611 | Msa0848460:CDS | 30.0% | |
| GAGAAATCTATCACATTTGT+GGG | - | chr5_4:32964593-32964612 | Msa0848460:CDS | 30.0% | |
| ! | TGATGTCTATTGATTGTATG+TGG | - | chr5_4:32964641-32964660 | Msa0848460:CDS | 30.0% |
| ! | TCTCAGTTACTTTGTAAACT+AGG | - | chr5_4:32964694-32964713 | Msa0848460:CDS | 30.0% |
| TAAAAACCATAGCATTGTCT+AGG | + | chr5_4:32964752-32964771 | None:intergenic | 30.0% | |
| !! | TGTTCTATTTGTTGTCGTTG+TGG | - | chr5_4:32960874-32960893 | Msa0848460:three_prime_UTR | 35.0% |
| GCTTATTCTCTCAATATGGA+AGG | - | chr5_4:32960921-32960940 | Msa0848460:three_prime_UTR | 35.0% | |
| ! | CTCTCAATATGGAAGGATTT+TGG | - | chr5_4:32960928-32960947 | Msa0848460:three_prime_UTR | 35.0% |
| ACAGAATTCATGATGTCCAA+TGG | + | chr5_4:32961214-32961233 | None:intergenic | 35.0% | |
| TCTTACAAGCGGCTATATTT+GGG | + | chr5_4:32961246-32961265 | None:intergenic | 35.0% | |
| TTCTTACAAGCGGCTATATT+TGG | + | chr5_4:32961247-32961266 | None:intergenic | 35.0% | |
| TAGCCGCTTGTAAGAATTAT+TGG | - | chr5_4:32961251-32961270 | Msa0848460:CDS | 35.0% | |
| ATATTGAACATACTGCCAAC+AGG | + | chr5_4:32961405-32961424 | None:intergenic | 35.0% | |
| ! | TGTTTCTTTTTCTTCTCCCT+TGG | + | chr5_4:32961636-32961655 | None:intergenic | 35.0% |
| GGAGAAGAAAAAGAAACAAG+AGG | - | chr5_4:32961638-32961657 | Msa0848460:intron | 35.0% | |
| GAGGATGATTATGGTTTGAA+AGG | + | chr5_4:32961694-32961713 | None:intergenic | 35.0% | |
| ! | TATCATTTATCCCTCTGAAG+TGG | - | chr5_4:32961759-32961778 | Msa0848460:intron | 35.0% |
| GTTTGCAAGTTAGGAGATAA+AGG | - | chr5_4:32961909-32961928 | Msa0848460:intron | 35.0% | |
| TCTAAAAACACACCCAAACA+AGG | + | chr5_4:32961975-32961994 | None:intergenic | 35.0% | |
| !!! | TTGTTTGGGTGTGTTTTTAG+AGG | - | chr5_4:32961974-32961993 | Msa0848460:CDS | 35.0% |
| ATAAGAAGAGGGAAAGGATA+TGG | - | chr5_4:32962049-32962068 | Msa0848460:intron | 35.0% | |
| ! | GAGAAGACTTGGAAATGTTT+TGG | + | chr5_4:32962092-32962111 | None:intergenic | 35.0% |
| CTAACTCCCAAAAAAACCTT+CGG | - | chr5_4:32962213-32962232 | Msa0848460:intron | 35.0% | |
| !!! | ATGCATCCGAAGGTTTTTTT+GGG | + | chr5_4:32962222-32962241 | None:intergenic | 35.0% |
| !!! | AATGCATCCGAAGGTTTTTT+TGG | + | chr5_4:32962223-32962242 | None:intergenic | 35.0% |
| ! | ATAGGTTAGCTCAAAAAGCT+TGG | + | chr5_4:32962599-32962618 | None:intergenic | 35.0% |
| ! | ACTGAGCAGAATTAGTTCTT+TGG | + | chr5_4:32962656-32962675 | None:intergenic | 35.0% |
| CAACTGATATGCAACTAACT+TGG | - | chr5_4:32962677-32962696 | Msa0848460:intron | 35.0% | |
| !!! | ACATGGGGTGGATTTTTTTT+AGG | + | chr5_4:32962959-32962978 | None:intergenic | 35.0% |
| !! | CCTAGTTTTCCATATTGTGT+GGG | + | chr5_4:32962987-32963006 | None:intergenic | 35.0% |
| ACAGCTTAACAGTTTATGTC+TGG | + | chr5_4:32963095-32963114 | None:intergenic | 35.0% | |
| GAACTCAAGAAATGTATTGG+AGG | + | chr5_4:32963345-32963364 | None:intergenic | 35.0% | |
| TACAAAATCCCCCATATTTG+GGG | + | chr5_4:32963368-32963387 | None:intergenic | 35.0% | |
| CTACAAAATCCCCCATATTT+GGG | + | chr5_4:32963369-32963388 | None:intergenic | 35.0% | |
| ACTACAAAATCCCCCATATT+TGG | + | chr5_4:32963370-32963389 | None:intergenic | 35.0% | |
| AAGGAAGAAGGAAAGAGAAA+TGG | + | chr5_4:32963441-32963460 | None:intergenic | 35.0% | |
| TTTGTTTGGGAGTTAAAGAG+GGG | + | chr5_4:32963483-32963502 | None:intergenic | 35.0% | |
| GTTTGTTTGGGAGTTAAAGA+GGG | + | chr5_4:32963484-32963503 | None:intergenic | 35.0% | |
| ! | GCATACTTAAGGGTTTGTTT+GGG | + | chr5_4:32963496-32963515 | None:intergenic | 35.0% |
| CAAGATCAGAAAGTGATGAT+GGG | + | chr5_4:32963521-32963540 | None:intergenic | 35.0% | |
| ACAAGATCAGAAAGTGATGA+TGG | + | chr5_4:32963522-32963541 | None:intergenic | 35.0% | |
| AAACAATCTTCTGTGCCTAA+TGG | - | chr5_4:32963655-32963674 | Msa0848460:intron | 35.0% | |
| ! | TTTTTGCTGGAGAGAAAATC+AGG | + | chr5_4:32963747-32963766 | None:intergenic | 35.0% |
| GTAAACTCTATGCAATCTAG+AGG | + | chr5_4:32963775-32963794 | None:intergenic | 35.0% | |
| TACGTACTAAATAGCGTATC+GGG | + | chr5_4:32963881-32963900 | None:intergenic | 35.0% | |
| CAACACTAAAATTGGGTCAT+CGG | - | chr5_4:32963990-32964009 | Msa0848460:CDS | 35.0% | |
| AACACTAAAATTGGGTCATC+GGG | - | chr5_4:32963991-32964010 | Msa0848460:CDS | 35.0% | |
| AAATCTACAAATGCGATACC+TGG | + | chr5_4:32964352-32964371 | None:intergenic | 35.0% | |
| ! | GCAAATTTTGCGTACTCTAT+TGG | - | chr5_4:32964499-32964518 | Msa0848460:intron | 35.0% |
| TGCAGAAGTTGTAAGTTTAC+AGG | - | chr5_4:32964544-32964563 | Msa0848460:intron | 35.0% | |
| CACTGTAAGATAACTTGAGC+AGG | + | chr5_4:32961158-32961177 | None:intergenic | 40.0% | |
| AAGAGGAGAAAGGTGAAGAA+TGG | - | chr5_4:32961655-32961674 | Msa0848460:intron | 40.0% | |
| ACAGACATTACCACTTCAGA+GGG | + | chr5_4:32961772-32961791 | None:intergenic | 40.0% | |
| AACAGACATTACCACTTCAG+AGG | + | chr5_4:32961773-32961792 | None:intergenic | 40.0% | |
| ACGTGAATTGAGAGAAGACT+TGG | + | chr5_4:32962103-32962122 | None:intergenic | 40.0% | |
| TAGGACTAAAACCCCCAATA+TGG | + | chr5_4:32962136-32962155 | None:intergenic | 40.0% | |
| GAAAAATAAACCCCAACGCA+AGG | - | chr5_4:32962160-32962179 | Msa0848460:intron | 40.0% | |
| !!! | AGGTTTTTTTGGGAGTTAGG+TGG | + | chr5_4:32962212-32962231 | None:intergenic | 40.0% |
| !!! | CGAAGGTTTTTTTGGGAGTT+AGG | + | chr5_4:32962215-32962234 | None:intergenic | 40.0% |
| GTGTCTCATATATTGCTTGG+TGG | - | chr5_4:32962311-32962330 | Msa0848460:intron | 40.0% | |
| TGTGAGTATGTGAGAAAGAG+AGG | - | chr5_4:32962476-32962495 | Msa0848460:intron | 40.0% | |
| GTGAGTATGTGAGAAAGAGA+GGG | - | chr5_4:32962477-32962496 | Msa0848460:intron | 40.0% | |
| TGAGTATGTGAGAAAGAGAG+GGG | - | chr5_4:32962478-32962497 | Msa0848460:intron | 40.0% | |
| ACCTATCATTAGGTCTGTTC+TGG | - | chr5_4:32962613-32962632 | Msa0848460:intron | 40.0% | |
| ACCAGAACAGACCTAATGAT+AGG | + | chr5_4:32962617-32962636 | None:intergenic | 40.0% | |
| GTTCAACTGAACCATATTCC+TGG | - | chr5_4:32962704-32962723 | Msa0848460:intron | 40.0% | |
| ACTGAACCATATTCCTGGTT+TGG | - | chr5_4:32962709-32962728 | Msa0848460:intron | 40.0% | |
| TCAGAACCAAACCAGGAATA+TGG | + | chr5_4:32962718-32962737 | None:intergenic | 40.0% | |
| !! | ATTCCTGGTTTGGTTCTGAT+TGG | - | chr5_4:32962719-32962738 | Msa0848460:intron | 40.0% |
| AAACCAATCAGAACCAAACC+AGG | + | chr5_4:32962725-32962744 | None:intergenic | 40.0% | |
| AAATCCAGTGATGGTAGGTA+AGG | + | chr5_4:32962778-32962797 | None:intergenic | 40.0% | |
| CAATGAAATCCAGTGATGGT+AGG | + | chr5_4:32962783-32962802 | None:intergenic | 40.0% | |
| CTACCATCACTGGATTTCAT+TGG | - | chr5_4:32962781-32962800 | Msa0848460:intron | 40.0% | |
| !!! | TTTTTTTTAGGTGGGGGATG+AGG | + | chr5_4:32962947-32962966 | None:intergenic | 40.0% |
| !!! | GGTGGATTTTTTTTAGGTGG+GGG | + | chr5_4:32962953-32962972 | None:intergenic | 40.0% |
| !!! | GGGTGGATTTTTTTTAGGTG+GGG | + | chr5_4:32962954-32962973 | None:intergenic | 40.0% |
| !!! | GGGGTGGATTTTTTTTAGGT+GGG | + | chr5_4:32962955-32962974 | None:intergenic | 40.0% |
| !!! | TGGGGTGGATTTTTTTTAGG+TGG | + | chr5_4:32962956-32962975 | None:intergenic | 40.0% |
| ! | GTTTTCCATATTGTGTGGGA+GGG | + | chr5_4:32962983-32963002 | None:intergenic | 40.0% |
| ! | AGTTTTCCATATTGTGTGGG+AGG | + | chr5_4:32962984-32963003 | None:intergenic | 40.0% |
| CCCACACAATATGGAAAACT+AGG | - | chr5_4:32962984-32963003 | Msa0848460:intron | 40.0% | |
| !! | GCCTAGTTTTCCATATTGTG+TGG | + | chr5_4:32962988-32963007 | None:intergenic | 40.0% |
| ! | TATTGGAGGAAGCTTTTCGA+GGG | + | chr5_4:32963331-32963350 | None:intergenic | 40.0% |
| GGGGAACTCAAGAAATGTAT+TGG | + | chr5_4:32963348-32963367 | None:intergenic | 40.0% | |
| TTCTTGAGTTCCCCCAAATA+TGG | - | chr5_4:32963354-32963373 | Msa0848460:intron | 40.0% | |
| TCTTGAGTTCCCCCAAATAT+GGG | - | chr5_4:32963355-32963374 | Msa0848460:intron | 40.0% | |
| ACAAAATCCCCCATATTTGG+GGG | + | chr5_4:32963367-32963386 | None:intergenic | 40.0% | |
| ! | TGGGGGATTTTGTAGTATGA+AGG | - | chr5_4:32963374-32963393 | Msa0848460:intron | 40.0% |
| TGCTTAGGGTAAAAGGAAGA+AGG | + | chr5_4:32963453-32963472 | None:intergenic | 40.0% | |
| ! | GGTTTGTTTGGGAGTTAAAG+AGG | + | chr5_4:32963485-32963504 | None:intergenic | 40.0% |
| ! | GGCATACTTAAGGGTTTGTT+TGG | + | chr5_4:32963497-32963516 | None:intergenic | 40.0% |
| ! | ATGATGGGAGGCATACTTAA+GGG | + | chr5_4:32963506-32963525 | None:intergenic | 40.0% |
| TCTGTACAGCTGAGAAAAAG+AGG | - | chr5_4:32963617-32963636 | Msa0848460:intron | 40.0% | |
| ! | TCTAGAGGCAAAGTTTTTGC+TGG | + | chr5_4:32963760-32963779 | None:intergenic | 40.0% |
| ACGTACTAAATAGCGTATCG+GGG | + | chr5_4:32963880-32963899 | None:intergenic | 40.0% | |
| TTGTGAAATAGCGGTTATGG+AGG | - | chr5_4:32963904-32963923 | Msa0848460:intron | 40.0% | |
| GTGTTGTGAATTGCAGATTG+TGG | + | chr5_4:32963976-32963995 | None:intergenic | 40.0% | |
| ! | CGAACAATACCCAGGTTTTA+AGG | - | chr5_4:32964303-32964322 | Msa0848460:intron | 40.0% |
| CATTGACCTAGACAATGCTA+TGG | - | chr5_4:32964743-32964762 | Msa0848460:CDS | 40.0% | |
| !! | AAGAGGGAAGCTTTGTTCCA+AGG | - | chr5_4:32961616-32961635 | Msa0848460:intron | 45.0% |
| !! | AGAGGGAAGCTTTGTTCCAA+GGG | - | chr5_4:32961617-32961636 | Msa0848460:intron | 45.0% |
| GCAAGTTAGGAGATAAAGGG+AGG | - | chr5_4:32961913-32961932 | Msa0848460:intron | 45.0% | |
| TAAAGGGAGGTGAGAGCTTT+AGG | - | chr5_4:32961926-32961945 | Msa0848460:intron | 45.0% | |
| AAAGGGAGGTGAGAGCTTTA+GGG | - | chr5_4:32961927-32961946 | Msa0848460:intron | 45.0% | |
| ! | ACGTTCGAGTTCCTCCATAT+TGG | - | chr5_4:32962119-32962138 | Msa0848460:intron | 45.0% |
| ! | CGTTCGAGTTCCTCCATATT+GGG | - | chr5_4:32962120-32962139 | Msa0848460:intron | 45.0% |
| ! | GTTCGAGTTCCTCCATATTG+GGG | - | chr5_4:32962121-32962140 | Msa0848460:intron | 45.0% |
| ! | TTCGAGTTCCTCCATATTGG+GGG | - | chr5_4:32962122-32962141 | Msa0848460:intron | 45.0% |
| GACTAAAACCCCCAATATGG+AGG | + | chr5_4:32962133-32962152 | None:intergenic | 45.0% | |
| AAATAAACCCCAACGCAAGG+TGG | - | chr5_4:32962163-32962182 | Msa0848460:intron | 45.0% | |
| AATAAACCCCAACGCAAGGT+GGG | - | chr5_4:32962164-32962183 | Msa0848460:intron | 45.0% | |
| ! | TGTGTCTGAAATGCATCCGA+AGG | + | chr5_4:32962232-32962251 | None:intergenic | 45.0% |
| TATGTGAGAAAGAGAGGGGA+GGG | - | chr5_4:32962482-32962501 | Msa0848460:intron | 45.0% | |
| CAGTGATGGTAGGTAAGGTT+GGG | + | chr5_4:32962773-32962792 | None:intergenic | 45.0% | |
| ! | GCGACATGTTGACTACTAGT+GGG | + | chr5_4:32962865-32962884 | None:intergenic | 45.0% |
| CACTAGTAGTCAACATGTCG+CGG | - | chr5_4:32962864-32962883 | Msa0848460:intron | 45.0% | |
| TATTGTGTGGGAGGGAACAT+GGG | + | chr5_4:32962975-32962994 | None:intergenic | 45.0% | |
| ATATTGTGTGGGAGGGAACA+TGG | + | chr5_4:32962976-32962995 | None:intergenic | 45.0% | |
| ATGTTCCCTCCCACACAATA+TGG | - | chr5_4:32962975-32962994 | Msa0848460:intron | 45.0% | |
| CTCTAGTTGCGAGTTTGTAG+TGG | - | chr5_4:32963143-32963162 | Msa0848460:intron | 45.0% | |
| TAGTTGCGAGTTTGTAGTGG+AGG | - | chr5_4:32963146-32963165 | Msa0848460:intron | 45.0% | |
| ! | AGTTGCGAGTTTGTAGTGGA+GGG | - | chr5_4:32963147-32963166 | Msa0848460:intron | 45.0% |
| ! | AGTTTGTAGTGGAGGGCTTT+GGG | - | chr5_4:32963154-32963173 | Msa0848460:intron | 45.0% |
| ! | GTATTGGAGGAAGCTTTTCG+AGG | + | chr5_4:32963332-32963351 | None:intergenic | 45.0% |
| CTTGAGTTCCCCCAAATATG+GGG | - | chr5_4:32963356-32963375 | Msa0848460:intron | 45.0% | |
| TTGAGTTCCCCCAAATATGG+GGG | - | chr5_4:32963357-32963376 | Msa0848460:intron | 45.0% | |
| !! | AGGAGAGTGCTTAGGGTAAA+AGG | + | chr5_4:32963460-32963479 | None:intergenic | 45.0% |
| !! | GATGATGGGAGGCATACTTA+AGG | + | chr5_4:32963507-32963526 | None:intergenic | 45.0% |
| !! | GATCAGAAAGTGATGATGGG+AGG | + | chr5_4:32963518-32963537 | None:intergenic | 45.0% |
| CAATCTTCTGTGCCTAATGG+TGG | - | chr5_4:32963658-32963677 | Msa0848460:intron | 45.0% | |
| GGAACACATGGTGCAAGTAA+TGG | - | chr5_4:32963679-32963698 | Msa0848460:intron | 45.0% | |
| ACACATGGTGCAAGTAATGG+TGG | - | chr5_4:32963682-32963701 | Msa0848460:intron | 45.0% | |
| TAACGGCTACAGTAGTGCTA+TGG | - | chr5_4:32963815-32963834 | Msa0848460:intron | 45.0% | |
| CAAACTCGGCTACACAACAA+TGG | + | chr5_4:32963937-32963956 | None:intergenic | 45.0% | |
| ATCCTGCCGGTAGTTTCATA+AGG | + | chr5_4:32964268-32964287 | None:intergenic | 45.0% | |
| ATGCTCTTCGAACAATACCC+AGG | - | chr5_4:32964295-32964314 | Msa0848460:intron | 45.0% | |
| AGCGCACTTCCTTAAAACCT+GGG | + | chr5_4:32964315-32964334 | None:intergenic | 45.0% | |
| AAGCGCACTTCCTTAAAACC+TGG | + | chr5_4:32964316-32964335 | None:intergenic | 45.0% | |
| AGATGAGGCACAATCATCCA+TGG | - | chr5_4:32964375-32964394 | Msa0848460:intron | 45.0% | |
| ACAATCATCCATGGCAATGC+AGG | - | chr5_4:32964384-32964403 | Msa0848460:intron | 45.0% | |
| GGGAAGATTGAGATAGTGCT+TGG | - | chr5_4:32964613-32964632 | Msa0848460:CDS | 45.0% | |
| CTAAAGACGCCTAAGCTTCG+AGG | - | chr5_4:32960962-32960981 | Msa0848460:three_prime_UTR | 50.0% | |
| TAAGCTTCGAGGACAGGCAT+GGG | - | chr5_4:32960973-32960992 | Msa0848460:three_prime_UTR | 50.0% | |
| CATCTGTCGCACTGCATTAC+TGG | + | chr5_4:32961023-32961042 | None:intergenic | 50.0% | |
| !! | AGAGCTTTAGGGAGAGACGA+GGG | - | chr5_4:32961938-32961957 | Msa0848460:intron | 50.0% |
| !! | GGGAATACCTCGCCTTGTTT+GGG | - | chr5_4:32961960-32961979 | Msa0848460:CDS | 50.0% |
| AAACACACCCAAACAAGGCG+AGG | + | chr5_4:32961970-32961989 | None:intergenic | 50.0% | |
| TTAGAGGTGAGCAGTCGAGA+AGG | - | chr5_4:32961990-32962009 | Msa0848460:CDS | 50.0% | |
| ATAAACCCCAACGCAAGGTG+GGG | - | chr5_4:32962165-32962184 | Msa0848460:intron | 50.0% | |
| ATAGTTCCCCACCTTGCGTT+GGG | + | chr5_4:32962174-32962193 | None:intergenic | 50.0% | |
| GAGTTAGGTGGAGACAGGAA+AGG | + | chr5_4:32962200-32962219 | None:intergenic | 50.0% | |
| TTTGGGAGTTAGGTGGAGAC+AGG | + | chr5_4:32962205-32962224 | None:intergenic | 50.0% | |
| GTATGTGAGAAAGAGAGGGG+AGG | - | chr5_4:32962481-32962500 | Msa0848460:intron | 50.0% | |
| CCAGTGATGGTAGGTAAGGT+TGG | + | chr5_4:32962774-32962793 | None:intergenic | 50.0% | |
| CCAACCTTACCTACCATCAC+TGG | - | chr5_4:32962771-32962790 | Msa0848460:intron | 50.0% | |
| CGGCCAATGAAATCCAGTGA+TGG | + | chr5_4:32962787-32962806 | None:intergenic | 50.0% | |
| ! | CGCGACATGTTGACTACTAG+TGG | + | chr5_4:32962866-32962885 | None:intergenic | 50.0% |
| ATTGTGTGGGAGGGAACATG+GGG | + | chr5_4:32962974-32962993 | None:intergenic | 50.0% | |
| ! | GAGTTTGTAGTGGAGGGCTT+TGG | - | chr5_4:32963153-32963172 | Msa0848460:intron | 50.0% |
| ! | GTTTGTAGTGGAGGGCTTTG+GGG | - | chr5_4:32963155-32963174 | Msa0848460:intron | 50.0% |
| ! | TTTGTAGTGGAGGGCTTTGG+GGG | - | chr5_4:32963156-32963175 | Msa0848460:intron | 50.0% |
| GTTTGGGAGTTAAAGAGGGG+AGG | + | chr5_4:32963480-32963499 | None:intergenic | 50.0% | |
| ! | GTGCCTAATGGTGGAACACA+TGG | - | chr5_4:32963667-32963686 | Msa0848460:intron | 50.0% |
| GCACCATGTGTTCCACCATT+AGG | + | chr5_4:32963673-32963692 | None:intergenic | 50.0% | |
| GCTATGGCGCTATTGCATAG+CGG | - | chr5_4:32963831-32963850 | Msa0848460:intron | 50.0% | |
| TGCCTTATGAAACTACCGGC+AGG | - | chr5_4:32964263-32964282 | Msa0848460:intron | 50.0% | |
| TTGTAGAGCCTGCATTGCCA+TGG | + | chr5_4:32964395-32964414 | None:intergenic | 50.0% | |
| ATGGCAATGCAGGCTCTACA+AGG | - | chr5_4:32964394-32964413 | Msa0848460:intron | 50.0% | |
| CATGCCTGTCCTCGAAGCTT+AGG | + | chr5_4:32960974-32960993 | None:intergenic | 55.0% | |
| CTAAGCTTCGAGGACAGGCA+TGG | - | chr5_4:32960972-32960991 | Msa0848460:three_prime_UTR | 55.0% | |
| !! | GAGAGCTTTAGGGAGAGACG+AGG | - | chr5_4:32961937-32961956 | Msa0848460:intron | 55.0% |
| !! | GAGCTTTAGGGAGAGACGAG+GGG | - | chr5_4:32961939-32961958 | Msa0848460:intron | 55.0% |
| !! | AGCTTTAGGGAGAGACGAGG+GGG | - | chr5_4:32961940-32961959 | Msa0848460:intron | 55.0% |
| ! | GGGGAATACCTCGCCTTGTT+TGG | - | chr5_4:32961959-32961978 | Msa0848460:CDS | 55.0% |
| TCGAGAAGGAGGCTTACGAG+TGG | - | chr5_4:32962004-32962023 | Msa0848460:CDS | 55.0% | |
| TAGTTCCCCACCTTGCGTTG+GGG | + | chr5_4:32962173-32962192 | None:intergenic | 55.0% | |
| GATAGTTCCCCACCTTGCGT+TGG | + | chr5_4:32962175-32962194 | None:intergenic | 55.0% | |
| AGAAAGAGAGGGGAGGGAAG+AGG | - | chr5_4:32962488-32962507 | Msa0848460:intron | 55.0% | |
| GAAAGAGAGGGGAGGGAAGA+GGG | - | chr5_4:32962489-32962508 | Msa0848460:intron | 55.0% | |
| AAAGAGAGGGGAGGGAAGAG+GGG | - | chr5_4:32962490-32962509 | Msa0848460:intron | 55.0% | |
| GTGGGGGATGAGGAAACTGA+TGG | + | chr5_4:32962937-32962956 | None:intergenic | 55.0% | |
| !! | TTGTAGTGGAGGGCTTTGGG+GGG | - | chr5_4:32963157-32963176 | Msa0848460:intron | 55.0% |
| !! | AGAGGGGAGGAGAGTGCTTA+GGG | + | chr5_4:32963467-32963486 | None:intergenic | 55.0% |
| !! | AAGAGGGGAGGAGAGTGCTT+AGG | + | chr5_4:32963468-32963487 | None:intergenic | 55.0% |
| GAGCATTTCGAGCATCCTGC+CGG | + | chr5_4:32964281-32964300 | None:intergenic | 55.0% | |
| CGCTTGATCGAAGCAAAGCC+AGG | - | chr5_4:32964331-32964350 | Msa0848460:intron | 55.0% | |
| GACGCCTAAGCTTCGAGGAC+AGG | - | chr5_4:32960967-32960986 | Msa0848460:three_prime_UTR | 60.0% | |
| GAGGTGAGCAGTCGAGAAGG+AGG | - | chr5_4:32961993-32962012 | Msa0848460:CDS | 60.0% | |
| TTTGGGGGGAGGGAAGCAGA+GGG | - | chr5_4:32963171-32963190 | Msa0848460:intron | 60.0% | |
| AGCAGGCCTCATTCCGTCCA+GGG | - | chr5_4:32964188-32964207 | Msa0848460:intron | 60.0% | |
| ACCTGACCCTGGACGGAATG+AGG | + | chr5_4:32964197-32964216 | None:intergenic | 60.0% | |
| GTTGGGAGCAGCTGCCTCTT+GGG | + | chr5_4:32964221-32964240 | None:intergenic | 60.0% | |
| TGTTGGGAGCAGCTGCCTCT+TGG | + | chr5_4:32964222-32964241 | None:intergenic | 60.0% | |
| GTGTGGGAGGGAACATGGGG+TGG | + | chr5_4:32962971-32962990 | None:intergenic | 65.0% | |
| !! | TAGTGGAGGGCTTTGGGGGG+AGG | - | chr5_4:32963160-32963179 | Msa0848460:intron | 65.0% |
| !! | AGTGGAGGGCTTTGGGGGGA+GGG | - | chr5_4:32963161-32963180 | Msa0848460:intron | 65.0% |
| ! | CTTTGGGGGGAGGGAAGCAG+AGG | - | chr5_4:32963170-32963189 | Msa0848460:intron | 65.0% |
| CAGCAGGCCTCATTCCGTCC+AGG | - | chr5_4:32964187-32964206 | Msa0848460:intron | 65.0% | |
| GCCTCATTCCGTCCAGGGTC+AGG | - | chr5_4:32964193-32964212 | Msa0848460:intron | 65.0% | |
| CTTGGGCACCTGACCCTGGA+CGG | + | chr5_4:32964204-32964223 | None:intergenic | 65.0% | |
| TCCAGGGTCAGGTGCCCAAG+AGG | - | chr5_4:32964204-32964223 | Msa0848460:intron | 65.0% | |
| GCCTCTTGGGCACCTGACCC+TGG | + | chr5_4:32964208-32964227 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 32960866 | 32964789 | 32960866 | ID=Msa0848460;Name=Msa0848460 |
| chr5_4 | mRNA | 32960866 | 32964789 | 32960866 | ID=Msa0848460-mRNA-1;Parent=Msa0848460;Name=Msa0848460-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|1|0.75|1|0.66|0.75|4|321|221 |
| chr5_4 | exon | 32960866 | 32961465 | 32960866 | ID=Msa0848460-mRNA-1:exon:11500;Parent=Msa0848460-mRNA-1 |
| chr5_4 | exon | 32961944 | 32962029 | 32961944 | ID=Msa0848460-mRNA-1:exon:11499;Parent=Msa0848460-mRNA-1 |
| chr5_4 | exon | 32963989 | 32964082 | 32963989 | ID=Msa0848460-mRNA-1:exon:11498;Parent=Msa0848460-mRNA-1 |
| chr5_4 | exon | 32964583 | 32964789 | 32964583 | ID=Msa0848460-mRNA-1:exon:11497;Parent=Msa0848460-mRNA-1 |
| chr5_4 | CDS | 32964583 | 32964789 | 32964583 | ID=Msa0848460-mRNA-1:cds;Parent=Msa0848460-mRNA-1 |
| chr5_4 | CDS | 32963989 | 32964082 | 32963989 | ID=Msa0848460-mRNA-1:cds;Parent=Msa0848460-mRNA-1 |
| chr5_4 | CDS | 32961944 | 32962029 | 32961944 | ID=Msa0848460-mRNA-1:cds;Parent=Msa0848460-mRNA-1 |
| chr5_4 | CDS | 32961187 | 32961465 | 32961187 | ID=Msa0848460-mRNA-1:cds;Parent=Msa0848460-mRNA-1 |
| chr5_4 | three_prime_UTR | 32960866 | 32961186 | 32960866 | ID=Msa0848460-mRNA-1:three_prime_utr;Parent=Msa0848460-mRNA-1 |
| Gene Sequence |
| Protein sequence |
