Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0850510 | XP_024639642.1 | 93.115 | 886 | 44 | 3 | 1 | 885 | 1 | 870 | 0.0 | 1604 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0850510 | sp|Q9LME2|SYCP1_ARATH | 48.832 | 899 | 418 | 11 | 1 | 885 | 1 | 871 | 0.0 | 765 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0850510 | G7KB78 | 88.829 | 922 | 47 | 3 | 1 | 885 | 1 | 903 | 0.0 | 1577 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0810030 | Msa0850510 | 0.876400 | 1.439580e-68 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0850510 | MtrunA17_Chr5g0426011 | 91.604 | 536 | 21 | 1 | 221 | 732 | 1 | 536 | 0.0 | 959 |
| Msa0850510 | MtrunA17_Chr5g0426021 | 79.216 | 255 | 14 | 2 | 1 | 218 | 1 | 253 | 7.34e-108 | 332 |
| Msa0850510 | MtrunA17_Chr5g0426001 | 77.838 | 185 | 9 | 2 | 733 | 885 | 2 | 186 | 1.22e-93 | 292 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0850510 | AT1G22260.1 | 48.832 | 899 | 418 | 11 | 1 | 885 | 1 | 871 | 0.0 | 765 |
| Msa0850510 | AT1G22275.1 | 48.031 | 889 | 425 | 10 | 1 | 885 | 1 | 856 | 0.0 | 752 |
| Msa0850510 | AT1G22260.3 | 48.144 | 862 | 404 | 9 | 1 | 832 | 1 | 849 | 0.0 | 707 |
| Msa0850510 | AT1G22275.2 | 48.068 | 828 | 408 | 8 | 1 | 825 | 1 | 809 | 0.0 | 691 |
| Msa0850510 | AT1G22260.2 | 47.922 | 818 | 393 | 9 | 82 | 885 | 1 | 799 | 0.0 | 689 |
| Msa0850510 | AT1G22275.3 | 48.198 | 666 | 336 | 3 | 1 | 666 | 1 | 657 | 0.0 | 550 |
Find 129 sgRNAs with CRISPR-Local
Find 420 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTCCATACTTTGGATTTC+TGG | 0.106313 | 5_4:+39789004 | None:intergenic |
| TTCAGCTTTCTCCTCTAATT+TGG | 0.139130 | 5_4:+39790593 | None:intergenic |
| TTAACTTCTGGGTCCTCTTT+TGG | 0.227517 | 5_4:+39788865 | None:intergenic |
| ATTACCTTAACAACAGTTCT+AGG | 0.252326 | 5_4:+39786167 | None:intergenic |
| GAAGATGGAGATTGTCAAAT+TGG | 0.257968 | 5_4:-39789878 | Msa0850510:CDS |
| ATCCCTATTCATTTGATTAG+AGG | 0.263251 | 5_4:-39785524 | None:intergenic |
| AGGCTATTAATGACATTAAA+AGG | 0.286706 | 5_4:-39789915 | Msa0850510:CDS |
| AGTCACAATTTCCAAATTAG+AGG | 0.303525 | 5_4:-39790604 | Msa0850510:CDS |
| TTTCACTGTGTTCAGCTTGC+AGG | 0.305499 | 5_4:+39789270 | None:intergenic |
| GTACCTCTAATCAAATGAAT+AGG | 0.312563 | 5_4:+39785521 | None:intergenic |
| AATTCTCAACTTCATATTCA+TGG | 0.313864 | 5_4:+39786420 | None:intergenic |
| ATTAAAAGAAGGAGTTCTTT+TGG | 0.324408 | 5_4:-39786773 | Msa0850510:CDS |
| ATGCTTTAATCTGAGCTTCA+TGG | 0.325526 | 5_4:+39789079 | None:intergenic |
| CCCTGTAGAATCTAGCTTCA+AGG | 0.329259 | 5_4:+39793265 | None:intergenic |
| GGATGAAAGCAAAGAAAATA+TGG | 0.336397 | 5_4:-39790420 | Msa0850510:CDS |
| TGTGCTTCATGCTAAGTTCT+TGG | 0.345671 | 5_4:-39790814 | Msa0850510:CDS |
| GGAAGGAAGATGAGAAATTA+TGG | 0.348931 | 5_4:-39793564 | Msa0850510:CDS |
| AGGCTCTTCGAGGTTGGAAT+TGG | 0.351206 | 5_4:+39794106 | None:intergenic |
| ACAGCTTCGAAACGTCTTAG+AGG | 0.351938 | 5_4:-39790291 | Msa0850510:CDS |
| TCGTTGTACGGTTCAACTTT+GGG | 0.352597 | 5_4:-39794070 | Msa0850510:CDS |
| TAATTCATGTGTACATCTAT+AGG | 0.361480 | 5_4:+39786311 | None:intergenic |
| ATCGTTGTACGGTTCAACTT+TGG | 0.363870 | 5_4:-39794071 | Msa0850510:CDS |
| CATGTTAACTTCTAGTAGAT+TGG | 0.371843 | 5_4:-39791183 | Msa0850510:CDS |
| GAAGCAGTTGATGCACATTC+AGG | 0.372712 | 5_4:-39789700 | Msa0850510:CDS |
| TAACGAAAACGCGAAGCTTA+AGG | 0.376984 | 5_4:-39793593 | Msa0850510:CDS |
| GTCTTCTAAATTCTTTATCA+TGG | 0.377090 | 5_4:+39791205 | None:intergenic |
| TACCTCTAATCAAATGAATA+GGG | 0.383833 | 5_4:+39785522 | None:intergenic |
| GAAGTATGAATTAGAGAAGA+TGG | 0.391033 | 5_4:-39789893 | Msa0850510:CDS |
| CCCAGAAGTTAATTCAAAAC+AGG | 0.404035 | 5_4:-39788854 | Msa0850510:intron |
| TGAAATTTGCTGCTGAAGAA+AGG | 0.404224 | 5_4:-39793100 | Msa0850510:CDS |
| CATCCTCGTCCTTCAAATAT+CGG | 0.405068 | 5_4:-39785588 | Msa0850510:CDS |
| CAATCTTGAAGGATCACTTC+AGG | 0.408264 | 5_4:-39790985 | Msa0850510:CDS |
| AGAGAATTTGAACTCAAAGT+TGG | 0.408824 | 5_4:-39791156 | Msa0850510:CDS |
| GAGAAAGCTGAAATTCTGTT+AGG | 0.410708 | 5_4:-39790582 | Msa0850510:CDS |
| CTATACTTCTTGCTTCAACT+TGG | 0.417563 | 5_4:-39790886 | Msa0850510:CDS |
| CATAACCAGTGAACAGAGAT+TGG | 0.417582 | 5_4:-39791084 | Msa0850510:CDS |
| TACCCCTAGAACTGTTGTTA+AGG | 0.431512 | 5_4:-39786171 | Msa0850510:intron |
| GCTTCTATTTCTTCACAGTA+AGG | 0.438225 | 5_4:+39786629 | None:intergenic |
| CGTAGAAAACAATGTTTATG+AGG | 0.441271 | 5_4:-39789107 | Msa0850510:intron |
| TTTATCCAATCTCTGTTCAC+TGG | 0.444972 | 5_4:+39791079 | None:intergenic |
| CAAGGCTATTGCAGCAATTG+AGG | 0.447046 | 5_4:-39789766 | Msa0850510:CDS |
| TGCTGAGAGAATTCAGCATT+TGG | 0.450518 | 5_4:-39790670 | Msa0850510:CDS |
| TAGCATGAAGCACATCATAC+TGG | 0.450947 | 5_4:+39790823 | None:intergenic |
| AACAAATCACCGATATTTGA+AGG | 0.451394 | 5_4:+39785579 | None:intergenic |
| TTCTTCAACAACTTCGGCAC+CGG | 0.456331 | 5_4:+39786605 | None:intergenic |
| GAGAATTTGAACTCAAAGTT+GGG | 0.456651 | 5_4:-39791155 | Msa0850510:CDS |
| CAGAAAATAAACAATCTTGA+AGG | 0.457143 | 5_4:-39790996 | Msa0850510:CDS |
| TACTAAGCTTAAGAAATCTC+TGG | 0.457644 | 5_4:-39793656 | Msa0850510:CDS |
| CTCACCTTTCTATGATGCTT+AGG | 0.460786 | 5_4:+39786545 | None:intergenic |
| ATCTTCAGATTCCGTTTCAT+CGG | 0.462299 | 5_4:-39794008 | Msa0850510:CDS |
| TTACCTTAACAACAGTTCTA+GGG | 0.473223 | 5_4:+39786168 | None:intergenic |
| ACTGTGCTACAGTGGACTCT+TGG | 0.475742 | 5_4:+39790715 | None:intergenic |
| GAAGAACAATTACAAAGAAA+AGG | 0.477258 | 5_4:-39786391 | Msa0850510:CDS |
| AACGTAAAACCAGGAAAAGC+AGG | 0.477327 | 5_4:-39786575 | Msa0850510:CDS |
| TAGAAATCAATACGATCAAA+TGG | 0.477543 | 5_4:-39790076 | Msa0850510:CDS |
| GAATAGGGATCATCTGCATA+TGG | 0.477666 | 5_4:+39785537 | None:intergenic |
| TCCTTGAAGCTAGATTCTAC+AGG | 0.477856 | 5_4:-39793266 | Msa0850510:CDS |
| GAAATTTGCTGCTGAAGAAA+GGG | 0.478421 | 5_4:-39793099 | Msa0850510:CDS |
| AATATCTCAGAGAAATGATC+AGG | 0.479619 | 5_4:-39790013 | Msa0850510:intron |
| GGAAATTGATACTCTGCAAA+AGG | 0.483387 | 5_4:-39790363 | Msa0850510:CDS |
| TGAAGCTTTAATCTCAAAGA+AGG | 0.488627 | 5_4:-39790637 | Msa0850510:CDS |
| TCTTCAGATTCCGTTTCATC+GGG | 0.489312 | 5_4:-39794007 | Msa0850510:CDS |
| CGCGAAACTTCCCGATGAAA+CGG | 0.489834 | 5_4:+39793997 | None:intergenic |
| TCCACTTTCTTCAACAACTT+CGG | 0.490669 | 5_4:+39786599 | None:intergenic |
| GAATCTATCGAGGCTCTTCG+AGG | 0.498143 | 5_4:+39794096 | None:intergenic |
| AAAGGAGAGGATGAAAATAG+AGG | 0.498263 | 5_4:-39790345 | Msa0850510:CDS |
| TGCAAATGTTATAGAAGAGA+AGG | 0.500758 | 5_4:-39793045 | Msa0850510:CDS |
| AGAAAGTGTCTCTTTCGTGC+TGG | 0.501908 | 5_4:+39790862 | None:intergenic |
| TAAAGAACAGGAAAAGAAGC+TGG | 0.508708 | 5_4:-39790243 | Msa0850510:CDS |
| ATTAGTGAAAGAGCAAGTTT+CGG | 0.509938 | 5_4:-39793841 | Msa0850510:CDS |
| CTATCGAGGCTCTTCGAGGT+TGG | 0.511880 | 5_4:+39794100 | None:intergenic |
| AGGCTTTGCTGCAGTTGCAA+TGG | 0.513603 | 5_4:-39788906 | Msa0850510:CDS |
| CAGAGTGCAAAGAAGAATCA+AGG | 0.515730 | 5_4:-39789722 | Msa0850510:CDS |
| CCGTTTCATCGATTAAAAGA+AGG | 0.516324 | 5_4:-39786784 | Msa0850510:CDS |
| AGAAAATATGGAAAGAATGC+AGG | 0.520425 | 5_4:-39790408 | Msa0850510:CDS |
| GCCGAAGTTGTTGAAGAAAG+TGG | 0.523660 | 5_4:-39786600 | Msa0850510:CDS |
| AAGGCTATTGCAGCAATTGA+GGG | 0.526951 | 5_4:-39789765 | Msa0850510:CDS |
| TGAAGGATCACTTCAGGAGA+TGG | 0.533658 | 5_4:-39790979 | Msa0850510:CDS |
| TGAGTGTAGGAAGCTAGAAG+AGG | 0.536020 | 5_4:-39789037 | Msa0850510:CDS |
| GCTGATCTTGCTGAAAAGCT+TGG | 0.538124 | 5_4:-39791029 | Msa0850510:CDS |
| TGCAGCAGGAACATGATAAG+AGG | 0.539558 | 5_4:-39789301 | Msa0850510:CDS |
| GTTAGGAAGTGTTAGATCAT+CGG | 0.542953 | 5_4:-39790565 | Msa0850510:CDS |
| TACCGAGACTCTTCAACAGT+TGG | 0.544911 | 5_4:-39793491 | Msa0850510:CDS |
| TATGAAGTTGAGAATTCTGA+TGG | 0.545809 | 5_4:-39786413 | Msa0850510:CDS |
| TCAGGAGGAACACGCTAAGC+TGG | 0.546991 | 5_4:-39789682 | Msa0850510:intron |
| GATAGATTCAAATCGTTGTA+CGG | 0.547193 | 5_4:-39794082 | Msa0850510:CDS |
| AATGGTAGAGAATAAGCAGC+TGG | 0.548203 | 5_4:-39790058 | Msa0850510:CDS |
| AACAAGTACTGTCTTGTTCG+AGG | 0.548694 | 5_4:-39786366 | Msa0850510:CDS |
| AGCTTGAATGAACAGATGAA+TGG | 0.551656 | 5_4:-39793293 | Msa0850510:CDS |
| AGCCAACTGTTGAAGAGTCT+CGG | 0.551677 | 5_4:+39793489 | None:intergenic |
| CGATATTTGAAGGACGAGGA+TGG | 0.558900 | 5_4:+39785589 | None:intergenic |
| GAGACTCTTCAACAGTTGGC+TGG | 0.560169 | 5_4:-39793487 | Msa0850510:CDS |
| CTGTGAAGAAATAGAAGCAC+CGG | 0.568173 | 5_4:-39786624 | Msa0850510:CDS |
| GCTCAAAATTTCAGCTCTAG+AGG | 0.569410 | 5_4:-39790441 | Msa0850510:CDS |
| TTCATTGATGCAGAGTCAGA+GGG | 0.572866 | 5_4:-39785619 | Msa0850510:intron |
| CATTCCTAAGCATCATAGAA+AGG | 0.573980 | 5_4:-39786549 | Msa0850510:intron |
| TTTCATCAAACTTGTTAACA+AGG | 0.574635 | 5_4:+39790919 | None:intergenic |
| CCTTGAAGCTAGATTCTACA+GGG | 0.574717 | 5_4:-39793265 | Msa0850510:CDS |
| ACAGGTTACTCATATGCAGC+AGG | 0.576637 | 5_4:-39789315 | Msa0850510:intron |
| GATGAGTGACAAGCCAAAAG+AGG | 0.578542 | 5_4:-39788878 | Msa0850510:CDS |
| TTTCATTGATGCAGAGTCAG+AGG | 0.580175 | 5_4:-39785620 | Msa0850510:intron |
| TAGATCATCGGAGAACCAAA+TGG | 0.581804 | 5_4:-39790553 | Msa0850510:intron |
| GCAATCGCAATGCAGAAGCT+AGG | 0.583781 | 5_4:-39794136 | None:intergenic |
| GAAGATGAGAAATTATGGAA+AGG | 0.591854 | 5_4:-39793559 | Msa0850510:CDS |
| GAAAACAGATCTTGATATTG+CGG | 0.595808 | 5_4:-39793817 | Msa0850510:intron |
| GTGAACTTGAAGATGAGTGT+AGG | 0.599411 | 5_4:-39789050 | Msa0850510:CDS |
| GCAAATGTTATAGAAGAGAA+GGG | 0.608131 | 5_4:-39793044 | Msa0850510:intron |
| GCGAATCTGAAGCTAACCGC+AGG | 0.609242 | 5_4:-39793977 | Msa0850510:intron |
| TACCTTAACAACAGTTCTAG+GGG | 0.611278 | 5_4:+39786169 | None:intergenic |
| AAGCTCAGATTAAAGCATTG+AGG | 0.620114 | 5_4:-39789074 | Msa0850510:CDS |
| CTCTGTATACTGTGCTACAG+TGG | 0.623363 | 5_4:+39790707 | None:intergenic |
| TTGATACTCTGCAAAAGGAG+AGG | 0.623737 | 5_4:-39790358 | Msa0850510:CDS |
| TTGGCTGGTATCGTTCAAGA+TGG | 0.632425 | 5_4:-39793472 | Msa0850510:intron |
| AGACATATTGAAGAAATCAG+AGG | 0.633777 | 5_4:-39790384 | Msa0850510:CDS |
| GCAGAGATCGATGACGGTAA+CGG | 0.638695 | 5_4:+39794037 | None:intergenic |
| TCACCGATATTTGAAGGACG+AGG | 0.642715 | 5_4:+39785585 | None:intergenic |
| CTATTGCAGCAATTGAGGGA+AGG | 0.643200 | 5_4:-39789761 | Msa0850510:CDS |
| GCAGTTGATGCACATTCAGG+AGG | 0.646273 | 5_4:-39789697 | Msa0850510:CDS |
| ATCGCAATGCAGAAGCTAGG+AGG | 0.647783 | 5_4:-39794133 | None:intergenic |
| ACGCGAAGCTTAAGGTGAAG+CGG | 0.656351 | 5_4:-39793585 | Msa0850510:CDS |
| GAAGCTTAAGGTGAAGCGGA+AGG | 0.659706 | 5_4:-39793581 | Msa0850510:CDS |
| TAAGCTTAAGAAATCTCTGG+AGG | 0.662299 | 5_4:-39793653 | Msa0850510:CDS |
| CTAAGACGTTTCGAAGCTGT+AGG | 0.663100 | 5_4:+39790294 | None:intergenic |
| AGCTGAAAATGAACTGAGAG+AGG | 0.664957 | 5_4:-39789225 | Msa0850510:intron |
| AAAGTGGAGAACGTAAAACC+AGG | 0.676173 | 5_4:-39786584 | Msa0850510:CDS |
| TGACGCGCAGAGATCGATGA+CGG | 0.682487 | 5_4:+39794031 | None:intergenic |
| ACAACGATTTGAATCTATCG+AGG | 0.692543 | 5_4:+39794086 | None:intergenic |
| GTAAAACCAGGAAAAGCAGG+AGG | 0.707258 | 5_4:-39786572 | Msa0850510:CDS |
| GCTGGAAGATCAGATCACAG+AGG | 0.771101 | 5_4:-39790225 | Msa0850510:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGAATTGTTTAAATAAATA+GGG | + | chr5_4:39790099-39790118 | None:intergenic | 10.0% |
| !! | TTTGAATTGTTTAAATAAAT+AGG | + | chr5_4:39790100-39790119 | None:intergenic | 10.0% |
| !!! | ATTATAATTTTATCATGTTT+TGG | - | chr5_4:39792293-39792312 | Msa0850510:intron | 10.0% |
| !! | TGAAAAAGATAAAGAAAAAT+TGG | - | chr5_4:39786303-39786322 | Msa0850510:intron | 15.0% |
| !! | CTTTCTTGTATAAAAATTTA+AGG | - | chr5_4:39786984-39787003 | Msa0850510:intron | 15.0% |
| !!! | AAAAATTTAAGGTTTCATTA+TGG | - | chr5_4:39786995-39787014 | Msa0850510:intron | 15.0% |
| !! | TTGATTAATGATTCAAATTA+CGG | + | chr5_4:39787219-39787238 | None:intergenic | 15.0% |
| !! | TCAATATAAATAGAGTTATA+TGG | + | chr5_4:39787907-39787926 | None:intergenic | 15.0% |
| !!! | TACTAATTTTTATTGTCTTA+TGG | - | chr5_4:39788404-39788423 | Msa0850510:intron | 15.0% |
| !! | TGAATTGTTTAAATAAATAG+GGG | + | chr5_4:39790098-39790117 | None:intergenic | 15.0% |
| !!! | TATTTTTTTGCAATATTTTC+AGG | - | chr5_4:39790713-39790732 | Msa0850510:CDS | 15.0% |
| !!! | TTTTGTATTATATTCAGATA+AGG | - | chr5_4:39791111-39791130 | Msa0850510:CDS | 15.0% |
| !! | ATTCCAATAAATTAAACTAA+CGG | + | chr5_4:39791198-39791217 | None:intergenic | 15.0% |
| !!! | ATTTTGTATTATATTCACAT+AGG | - | chr5_4:39791263-39791282 | Msa0850510:intron | 15.0% |
| !!! | TTTTGTATTATATTCACATA+GGG | - | chr5_4:39791264-39791283 | Msa0850510:intron | 15.0% |
| !! | TATTAGAATTATGAATTAAC+TGG | - | chr5_4:39791362-39791381 | Msa0850510:intron | 15.0% |
| !! | ATTAGAATTATGAATTAACT+GGG | - | chr5_4:39791363-39791382 | Msa0850510:intron | 15.0% |
| !!! | TTGATAATGATAATAGATAT+TGG | - | chr5_4:39791862-39791881 | Msa0850510:intron | 15.0% |
| !!! | TGATATAATTTCAAGTATTT+AGG | - | chr5_4:39792109-39792128 | Msa0850510:intron | 15.0% |
| !!! | TGTTTTATCTTAATTATGTA+TGG | - | chr5_4:39792366-39792385 | Msa0850510:intron | 15.0% |
| !!! | TATTTTTTTTGTTTTAAGAG+AGG | - | chr5_4:39792489-39792508 | Msa0850510:intron | 15.0% |
| !!! | ATTTTTTTTGTTTTAAGAGA+GGG | - | chr5_4:39792490-39792509 | Msa0850510:intron | 15.0% |
| !! | AATGATCAGAAAAAATATTA+TGG | + | chr5_4:39792631-39792650 | None:intergenic | 15.0% |
| !!! | TATAAAATGACAAATGTTTT+AGG | - | chr5_4:39793141-39793160 | Msa0850510:intron | 15.0% |
| !! | AAGTAACTCAATATATATAA+GGG | + | chr5_4:39793806-39793825 | None:intergenic | 15.0% |
| !!! | TTTTGAAATGTATGAAACTT+AGG | - | chr5_4:39785918-39785937 | Msa0850510:intron | 20.0% |
| !!! | TTTGAAATGTATGAAACTTA+GGG | - | chr5_4:39785919-39785938 | Msa0850510:intron | 20.0% |
| !! | AACTAATTACATACGAAAAA+AGG | + | chr5_4:39786252-39786271 | None:intergenic | 20.0% |
| !! | TATATTGTTATCCTTATTAC+AGG | - | chr5_4:39786511-39786530 | Msa0850510:intron | 20.0% |
| !! | TTTGAAGAAATAATATGCAA+TGG | - | chr5_4:39786658-39786677 | Msa0850510:intron | 20.0% |
| !!! | GAATGTTTTATATCAAGAAT+AGG | - | chr5_4:39786684-39786703 | Msa0850510:intron | 20.0% |
| !!! | TATTTTTACCTTGAATAAGT+AGG | + | chr5_4:39787172-39787191 | None:intergenic | 20.0% |
| !! | TGATTAATGATTCAAATTAC+GGG | + | chr5_4:39787218-39787237 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTTTTGAATGGC+AGG | + | chr5_4:39788036-39788055 | None:intergenic | 20.0% |
| !! | TGATTTGATGTAATATAATG+TGG | + | chr5_4:39788286-39788305 | None:intergenic | 20.0% |
| !!! | CATCTTTGACTTTTATTTTA+AGG | + | chr5_4:39788534-39788553 | None:intergenic | 20.0% |
| !! | ATATAAAAATAACGAACACA+AGG | + | chr5_4:39789168-39789187 | None:intergenic | 20.0% |
| !!! | ATTGACTTCTTACAATATTT+TGG | - | chr5_4:39790025-39790044 | Msa0850510:CDS | 20.0% |
| !!! | AGTTTGTAAATTACTCTTTT+TGG | - | chr5_4:39790185-39790204 | Msa0850510:intron | 20.0% |
| !!! | GTTTGTAAATTACTCTTTTT+GGG | - | chr5_4:39790186-39790205 | Msa0850510:intron | 20.0% |
| !!! | TTTGTAAATTACTCTTTTTG+GGG | - | chr5_4:39790187-39790206 | Msa0850510:intron | 20.0% |
| !! | TGATGAGATTAATTTATCAT+AGG | + | chr5_4:39790676-39790695 | None:intergenic | 20.0% |
| !!! | ATACCGTTAGTTTAATTTAT+TGG | - | chr5_4:39791192-39791211 | Msa0850510:CDS | 20.0% |
| !!! | AAGAAAATTGAAGCAATTTT+AGG | + | chr5_4:39791533-39791552 | None:intergenic | 20.0% |
| !! | TTATTTGCTTGGAATAATAA+TGG | - | chr5_4:39791587-39791606 | Msa0850510:intron | 20.0% |
| !! | AAGATAATTAACAACCATAA+AGG | - | chr5_4:39792031-39792050 | Msa0850510:intron | 20.0% |
| !!! | TCACTTTTAAAGATGAATTA+TGG | - | chr5_4:39792545-39792564 | Msa0850510:intron | 20.0% |
| !! | GTTTATTAAAAGATCAAAGA+AGG | - | chr5_4:39792567-39792586 | Msa0850510:intron | 20.0% |
| !!! | TTTTAATTACTCATCCTTAA+TGG | + | chr5_4:39792663-39792682 | None:intergenic | 20.0% |
| !! | GAGTAATTAAAAGATCTAAT+TGG | - | chr5_4:39792671-39792690 | Msa0850510:intron | 20.0% |
| !! | ATATAAATATCACGACAATA+TGG | - | chr5_4:39792723-39792742 | Msa0850510:intron | 20.0% |
| !! | TATAAATATCACGACAATAT+GGG | - | chr5_4:39792724-39792743 | Msa0850510:intron | 20.0% |
| !!! | CAGAAAAATTCAATATTTTC+AGG | + | chr5_4:39793417-39793436 | None:intergenic | 20.0% |
| !!! | ATTGAATTTTTCTGATTATC+AGG | - | chr5_4:39793423-39793442 | Msa0850510:intron | 20.0% |
| !!! | GTATTTATCTTTTGTTTTCT+TGG | + | chr5_4:39793451-39793470 | None:intergenic | 20.0% |
| !! | ATATATAAGGGTAAACTAAT+TGG | + | chr5_4:39793794-39793813 | None:intergenic | 20.0% |
| !! | GAAGTAACTCAATATATATA+AGG | + | chr5_4:39793807-39793826 | None:intergenic | 20.0% |
| !!! | TGCTTTTAATTATACTATGT+CGG | + | chr5_4:39793841-39793860 | None:intergenic | 20.0% |
| !! | GATTAGTATTATATCTGATT+TGG | + | chr5_4:39793928-39793947 | None:intergenic | 20.0% |
| ! | TCAATAGAAGCAGAAAAAAA+CGG | + | chr5_4:39785729-39785748 | None:intergenic | 25.0% |
| !!! | TGTTTTGTTGTTGTAATGAA+CGG | - | chr5_4:39785945-39785964 | Msa0850510:intron | 25.0% |
| ! | AAAGGAACAAAAAGCAAAAT+AGG | + | chr5_4:39786234-39786253 | None:intergenic | 25.0% |
| !! | AGTTGATATGAAAAGTTGAT+TGG | - | chr5_4:39786463-39786482 | Msa0850510:intron | 25.0% |
| ! | TAAGTAGTTTCATGTTAGAA+AGG | - | chr5_4:39786824-39786843 | Msa0850510:intron | 25.0% |
| ! | ATTAACACTACTTTATGCAT+TGG | + | chr5_4:39787077-39787096 | None:intergenic | 25.0% |
| ! | CAAAAAAATACTTCTCTAAC+AGG | + | chr5_4:39787148-39787167 | None:intergenic | 25.0% |
| !!! | TTTTTTGTCCTACTTATTCA+AGG | - | chr5_4:39787161-39787180 | Msa0850510:intron | 25.0% |
| !! | TTATTTCTTAGTGAGGTTTA+AGG | - | chr5_4:39787781-39787800 | Msa0850510:intron | 25.0% |
| ! | ACAAAATGACAAGAATTGTT+TGG | + | chr5_4:39787851-39787870 | None:intergenic | 25.0% |
| ! | ATGCAACATAGTATTAAGTT+AGG | + | chr5_4:39788012-39788031 | None:intergenic | 25.0% |
| ! | GAACATTTACTATGTTCTTA+AGG | + | chr5_4:39788220-39788239 | None:intergenic | 25.0% |
| ! | ATGAAGTTATAAGGATTTGA+GGG | + | chr5_4:39788354-39788373 | None:intergenic | 25.0% |
| ! | TTCACTATGATGAAGTTATA+AGG | + | chr5_4:39788363-39788382 | None:intergenic | 25.0% |
| ! | GTCTTCTAAATTCTTTATCA+TGG | + | chr5_4:39788452-39788471 | None:intergenic | 25.0% |
| ! | CAGAAAATAAACAATCTTGA+AGG | - | chr5_4:39788658-39788677 | Msa0850510:intron | 25.0% |
| !!! | TTTCATCAAACTTGTTAACA+AGG | + | chr5_4:39788738-39788757 | None:intergenic | 25.0% |
| ! | TGATTAACGATAATACCATT+TGG | + | chr5_4:39789119-39789138 | None:intergenic | 25.0% |
| ! | TAGAAATCAATACGATCAAA+TGG | - | chr5_4:39789578-39789597 | Msa0850510:intron | 25.0% |
| ! | TATAACTGGTTACCTATAAT+AGG | - | chr5_4:39789671-39789690 | Msa0850510:intron | 25.0% |
| ! | AGGCTATTAATGACATTAAA+AGG | - | chr5_4:39789739-39789758 | Msa0850510:CDS | 25.0% |
| ! | GTATACATATTATATAGCTC+AGG | + | chr5_4:39790486-39790505 | None:intergenic | 25.0% |
| ! | CTAACATGCAAATAAACTAA+CGG | + | chr5_4:39790860-39790879 | None:intergenic | 25.0% |
| !! | ATTAATTTGAATCATCGAGT+TGG | + | chr5_4:39790965-39790984 | None:intergenic | 25.0% |
| !! | ACTAAACAATTTTCATACTG+TGG | - | chr5_4:39791003-39791022 | Msa0850510:CDS | 25.0% |
| ! | CAATCGTTTACCTTTATATT+AGG | + | chr5_4:39791389-39791408 | None:intergenic | 25.0% |
| ! | CTAATATAAAGGTAAACGAT+TGG | - | chr5_4:39791387-39791406 | Msa0850510:intron | 25.0% |
| ! | ATGATTATCTTGTCACATAT+AGG | - | chr5_4:39791645-39791664 | Msa0850510:intron | 25.0% |
| ! | TAACATGCTATTAGATTAGA+TGG | - | chr5_4:39791715-39791734 | Msa0850510:intron | 25.0% |
| !! | TTGACGATTTTGCATATAAA+AGG | - | chr5_4:39791778-39791797 | Msa0850510:intron | 25.0% |
| !! | TGACGATTTTGCATATAAAA+GGG | - | chr5_4:39791779-39791798 | Msa0850510:intron | 25.0% |
| ! | TCTACTATCAATTACCTTTA+TGG | + | chr5_4:39792048-39792067 | None:intergenic | 25.0% |
| !!! | TCTAATTGGTCTTCATTAAT+AGG | - | chr5_4:39792685-39792704 | Msa0850510:intron | 25.0% |
| ! | AAAAATGCACAAATTCAACT+TGG | + | chr5_4:39792774-39792793 | None:intergenic | 25.0% |
| ! | CAAATTCATTCAACATTCAT+TGG | + | chr5_4:39792808-39792827 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTGTTCATGTGAC+AGG | - | chr5_4:39792841-39792860 | Msa0850510:intron | 25.0% |
| !! | ATTAAAAGAAGGAGTTCTTT+TGG | - | chr5_4:39792881-39792900 | Msa0850510:intron | 25.0% |
| !!! | AAATGTTTTAGGCCTTTTAA+TGG | - | chr5_4:39793152-39793171 | Msa0850510:intron | 25.0% |
| ! | AATTCTCAACTTCATATTCA+TGG | + | chr5_4:39793237-39793256 | None:intergenic | 25.0% |
| ! | GAAGAACAATTACAAAGAAA+AGG | - | chr5_4:39793263-39793282 | Msa0850510:CDS | 25.0% |
| ! | TAATTCATGTGTACATCTAT+AGG | + | chr5_4:39793346-39793365 | None:intergenic | 25.0% |
| ! | TAAATGACATGCCAATAAAA+AGG | + | chr5_4:39793531-39793550 | None:intergenic | 25.0% |
| ! | AAATATAACTACAGCACAAT+AGG | + | chr5_4:39794008-39794027 | None:intergenic | 25.0% |
| GATAGATTCAAATCGTTGTA+CGG | - | chr5_4:39785572-39785591 | Msa0850510:CDS | 30.0% | |
| ATTAGTGAAAGAGCAAGTTT+CGG | - | chr5_4:39785813-39785832 | Msa0850510:intron | 30.0% | |
| GAAAACAGATCTTGATATTG+CGG | - | chr5_4:39785837-39785856 | Msa0850510:intron | 30.0% | |
| TACTAAGCTTAAGAAATCTC+TGG | - | chr5_4:39785998-39786017 | Msa0850510:intron | 30.0% | |
| GAAGATGAGAAATTATGGAA+AGG | - | chr5_4:39786095-39786114 | Msa0850510:intron | 30.0% | |
| !! | ATGAAAAGTTGATTGGTTTG+AGG | - | chr5_4:39786470-39786489 | Msa0850510:intron | 30.0% |
| TGCAAATGTTATAGAAGAGA+AGG | - | chr5_4:39786609-39786628 | Msa0850510:CDS | 30.0% | |
| GCAAATGTTATAGAAGAGAA+GGG | - | chr5_4:39786610-39786629 | Msa0850510:CDS | 30.0% | |
| GATGATATAGTGAAACATGA+AGG | - | chr5_4:39786717-39786736 | Msa0850510:intron | 30.0% | |
| ! | TGAAGGATGTCTAAAAGTTT+TGG | - | chr5_4:39786734-39786753 | Msa0850510:intron | 30.0% |
| TGTGTTTGGCTAATGAATTT+AGG | - | chr5_4:39786787-39786806 | Msa0850510:CDS | 30.0% | |
| ! | TAGAAAGGTCATTGATCTTT+TGG | - | chr5_4:39786839-39786858 | Msa0850510:intron | 30.0% |
| GTGTTAATCATATCTTTGTC+TGG | - | chr5_4:39787089-39787108 | Msa0850510:intron | 30.0% | |
| AACTCACATAAATGTCTTCA+GGG | + | chr5_4:39787123-39787142 | None:intergenic | 30.0% | |
| CTACTTCAAACACACTAAAT+AGG | - | chr5_4:39787321-39787340 | Msa0850510:intron | 30.0% | |
| TCATCTTTAACTAATGCTTC+TGG | - | chr5_4:39787383-39787402 | Msa0850510:intron | 30.0% | |
| TCAATTCAAAACCAGACTAT+CGG | + | chr5_4:39787468-39787487 | None:intergenic | 30.0% | |
| !!! | AGTCTGGTTTTGAATTGAAT+TGG | - | chr5_4:39787470-39787489 | Msa0850510:intron | 30.0% |
| ATTCAATACCATATTCTCGA+TGG | + | chr5_4:39787510-39787529 | None:intergenic | 30.0% | |
| ! | AACCATTTTAAACCTTTTCC+AGG | - | chr5_4:39787689-39787708 | Msa0850510:intron | 30.0% |
| ACGAAAATGTAGCATGAATT+TGG | - | chr5_4:39787734-39787753 | Msa0850510:intron | 30.0% | |
| ! | CTTTTACATGTCAGTTCTTA+AGG | + | chr5_4:39788077-39788096 | None:intergenic | 30.0% |
| ACTACTCTTTGATGTTTACT+TGG | - | chr5_4:39788100-39788119 | Msa0850510:intron | 30.0% | |
| CTTTGATGTTTACTTGGAAA+AGG | - | chr5_4:39788106-39788125 | Msa0850510:intron | 30.0% | |
| !! | GTATCTCTCTAGAACATATA+AGG | + | chr5_4:39788184-39788203 | None:intergenic | 30.0% |
| GATGAAGTTATAAGGATTTG+AGG | + | chr5_4:39788355-39788374 | None:intergenic | 30.0% | |
| CATGTTAACTTCTAGTAGAT+TGG | - | chr5_4:39788471-39788490 | Msa0850510:intron | 30.0% | |
| AGAGAATTTGAACTCAAAGT+TGG | - | chr5_4:39788498-39788517 | Msa0850510:intron | 30.0% | |
| GAGAATTTGAACTCAAAGTT+GGG | - | chr5_4:39788499-39788518 | Msa0850510:intron | 30.0% | |
| ! | TGAAGCTTTAATCTCAAAGA+AGG | - | chr5_4:39789017-39789036 | Msa0850510:CDS | 30.0% |
| AGTCACAATTTCCAAATTAG+AGG | - | chr5_4:39789050-39789069 | Msa0850510:CDS | 30.0% | |
| ATATTTAATGCTTTGCAGCA+AGG | - | chr5_4:39789184-39789203 | Msa0850510:intron | 30.0% | |
| GGATGAAAGCAAAGAAAATA+TGG | - | chr5_4:39789234-39789253 | Msa0850510:CDS | 30.0% | |
| AGAAAATATGGAAAGAATGC+AGG | - | chr5_4:39789246-39789265 | Msa0850510:CDS | 30.0% | |
| AGACATATTGAAGAAATCAG+AGG | - | chr5_4:39789270-39789289 | Msa0850510:CDS | 30.0% | |
| AGGCATGCAAAAAACTTAAA+TGG | + | chr5_4:39789508-39789527 | None:intergenic | 30.0% | |
| AATATCTCAGAGAAATGATC+AGG | - | chr5_4:39789641-39789660 | Msa0850510:intron | 30.0% | |
| GAAGTATGAATTAGAGAAGA+TGG | - | chr5_4:39789761-39789780 | Msa0850510:CDS | 30.0% | |
| TGTCAAATTGGAAAAAGACA+AGG | - | chr5_4:39789788-39789807 | Msa0850510:intron | 30.0% | |
| ATTGGTCAAAAATGTTTCAG+TGG | + | chr5_4:39789851-39789870 | None:intergenic | 30.0% | |
| GTAATTTGATCGAAGTGAAT+TGG | - | chr5_4:39790162-39790181 | Msa0850510:intron | 30.0% | |
| CATCACTACTTTCTTAGTAT+GGG | - | chr5_4:39790253-39790272 | Msa0850510:CDS | 30.0% | |
| ! | TTGTTTTCTACGTGTAATCA+AGG | + | chr5_4:39790539-39790558 | None:intergenic | 30.0% |
| CGTAGAAAACAATGTTTATG+AGG | - | chr5_4:39790547-39790566 | Msa0850510:intron | 30.0% | |
| TATTCCATACTTTGGATTTC+TGG | + | chr5_4:39790653-39790672 | None:intergenic | 30.0% | |
| ATCATAGGTATTCCATACTT+TGG | + | chr5_4:39790661-39790680 | None:intergenic | 30.0% | |
| !! | TGCAATATTTTCAGGAAGAA+AGG | - | chr5_4:39790721-39790740 | Msa0850510:CDS | 30.0% |
| !! | CCTGTTTTGAATTAACTTCT+GGG | + | chr5_4:39790803-39790822 | None:intergenic | 30.0% |
| !! | ACCTGTTTTGAATTAACTTC+TGG | + | chr5_4:39790804-39790823 | None:intergenic | 30.0% |
| GAAGTTAATTCAAAACAGGT+TGG | - | chr5_4:39790804-39790823 | Msa0850510:CDS | 30.0% | |
| ! | CGTTAGTTTATTTGCATGTT+AGG | - | chr5_4:39790858-39790877 | Msa0850510:CDS | 30.0% |
| ! | TTGGCTTCAGTGATATTTTT+GGG | + | chr5_4:39790946-39790965 | None:intergenic | 30.0% |
| CAGTGATTAAATGATTGCAT+AGG | - | chr5_4:39791074-39791093 | Msa0850510:CDS | 30.0% | |
| ATTAACTGGGCCTAATATAA+AGG | - | chr5_4:39791376-39791395 | Msa0850510:intron | 30.0% | |
| CAATGTACACATTAATGACT+TGG | + | chr5_4:39791413-39791432 | None:intergenic | 30.0% | |
| CAAGTCATTAATGTGTACAT+TGG | - | chr5_4:39791411-39791430 | Msa0850510:intron | 30.0% | |
| TGTCACATATAGGCATAATA+TGG | - | chr5_4:39791655-39791674 | Msa0850510:intron | 30.0% | |
| !! | TTTTGCATATAAAAGGGTGT+AGG | - | chr5_4:39791785-39791804 | Msa0850510:intron | 30.0% |
| GCATATCAGTTGTTATCTAA+TGG | - | chr5_4:39791901-39791920 | Msa0850510:intron | 30.0% | |
| !! | AGGCTTTGTTTAGTACAATT+AGG | - | chr5_4:39792006-39792025 | Msa0850510:intron | 30.0% |
| TATACTATACCATTACATGC+AGG | + | chr5_4:39792607-39792626 | None:intergenic | 30.0% | |
| TCATTAAAAGCTCTCCATTA+AGG | - | chr5_4:39792646-39792665 | Msa0850510:intron | 30.0% | |
| ! | TTCTTTTAATCGATGAAACG+GGG | + | chr5_4:39792871-39792890 | None:intergenic | 30.0% |
| ! | CTTCTTTTAATCGATGAAAC+GGG | + | chr5_4:39792872-39792891 | None:intergenic | 30.0% |
| ! | CCTTCTTTTAATCGATGAAA+CGG | + | chr5_4:39792873-39792892 | None:intergenic | 30.0% |
| ATGACTTGAATGTATTAAGG+AGG | + | chr5_4:39792965-39792984 | None:intergenic | 30.0% | |
| GAGATGACTTGAATGTATTA+AGG | + | chr5_4:39792968-39792987 | None:intergenic | 30.0% | |
| TGATTTCAGACACCATTAAA+AGG | + | chr5_4:39793167-39793186 | None:intergenic | 30.0% | |
| TATGAAGTTGAGAATTCTGA+TGG | - | chr5_4:39793241-39793260 | Msa0850510:intron | 30.0% | |
| TTACCTTAACAACAGTTCTA+GGG | + | chr5_4:39793489-39793508 | None:intergenic | 30.0% | |
| ATTACCTTAACAACAGTTCT+AGG | + | chr5_4:39793490-39793509 | None:intergenic | 30.0% | |
| !! | TGTGCATCTTGATTTGTTAA+AGG | + | chr5_4:39793575-39793594 | None:intergenic | 30.0% |
| ! | TCCTTTTTCCTATAAGACTT+AGG | - | chr5_4:39793897-39793916 | Msa0850510:intron | 30.0% |
| ! | TCCTAAGTCTTATAGGAAAA+AGG | + | chr5_4:39793901-39793920 | None:intergenic | 30.0% |
| ! | TGGTTTATCCTAAGTCTTAT+AGG | + | chr5_4:39793908-39793927 | None:intergenic | 30.0% |
| CTTTGTACATACCTTGTATA+AGG | - | chr5_4:39793947-39793966 | Msa0850510:intron | 30.0% | |
| CTTATTTGTCACCTTATACA+AGG | + | chr5_4:39793961-39793980 | None:intergenic | 30.0% | |
| AACAAATCACCGATATTTGA+AGG | + | chr5_4:39794078-39794097 | None:intergenic | 30.0% | |
| ACAACGATTTGAATCTATCG+AGG | + | chr5_4:39785571-39785590 | None:intergenic | 35.0% | |
| ATCTTCAGATTCCGTTTCAT+CGG | - | chr5_4:39785646-39785665 | Msa0850510:intron | 35.0% | |
| GAAATCAGAATCAAAACCTG+CGG | + | chr5_4:39785696-39785715 | None:intergenic | 35.0% | |
| CTGCTTCTATTGATCGTAAT+CGG | - | chr5_4:39785736-39785755 | Msa0850510:intron | 35.0% | |
| TAAGCTTAAGAAATCTCTGG+AGG | - | chr5_4:39786001-39786020 | Msa0850510:intron | 35.0% | |
| GGAAGGAAGATGAGAAATTA+TGG | - | chr5_4:39786090-39786109 | Msa0850510:intron | 35.0% | |
| AGCTTGAATGAACAGATGAA+TGG | - | chr5_4:39786361-39786380 | Msa0850510:CDS | 35.0% | |
| GCTCATTATCACCTGTAATA+AGG | + | chr5_4:39786525-39786544 | None:intergenic | 35.0% | |
| !! | TGAAATTTGCTGCTGAAGAA+AGG | - | chr5_4:39786554-39786573 | Msa0850510:CDS | 35.0% |
| !! | GAAATTTGCTGCTGAAGAAA+GGG | - | chr5_4:39786555-39786574 | Msa0850510:CDS | 35.0% |
| !! | TCTAAAAGTTTTGGTCCAGT+AGG | - | chr5_4:39786743-39786762 | Msa0850510:intron | 35.0% |
| TACAGAACTTATGAACCTAC+TGG | + | chr5_4:39786761-39786780 | None:intergenic | 35.0% | |
| AAAACTGAATGTAAGACCCT+GGG | + | chr5_4:39786868-39786887 | None:intergenic | 35.0% | |
| TAAAACTGAATGTAAGACCC+TGG | + | chr5_4:39786869-39786888 | None:intergenic | 35.0% | |
| ! | CTTTTGTGAGTCTGATTTAG+TGG | - | chr5_4:39786951-39786970 | Msa0850510:intron | 35.0% |
| GTTTCATTATGGAACTCTAG+TGG | - | chr5_4:39787006-39787025 | Msa0850510:intron | 35.0% | |
| CAACTCACATAAATGTCTTC+AGG | + | chr5_4:39787124-39787143 | None:intergenic | 35.0% | |
| CTGAAGACATTTATGTGAGT+TGG | - | chr5_4:39787122-39787141 | Msa0850510:intron | 35.0% | |
| ! | AGCTTTGATAGCAACTTGAA+AGG | + | chr5_4:39787262-39787281 | None:intergenic | 35.0% |
| AGATGACTTTCAAACTACGT+CGG | + | chr5_4:39787369-39787388 | None:intergenic | 35.0% | |
| TTTAACTAATGCTTCTGGTG+AGG | - | chr5_4:39787388-39787407 | Msa0850510:intron | 35.0% | |
| TTAACTAATGCTTCTGGTGA+GGG | - | chr5_4:39787389-39787408 | Msa0850510:intron | 35.0% | |
| TAATTCTAACATCCCTATGG+TGG | + | chr5_4:39787445-39787464 | None:intergenic | 35.0% | |
| TGTTAGAATTACCGATAGTC+TGG | - | chr5_4:39787454-39787473 | Msa0850510:intron | 35.0% | |
| TGCCTGGAAAAGGTTTAAAA+TGG | + | chr5_4:39787694-39787713 | None:intergenic | 35.0% | |
| ! | GCATCATAACATGTTTTCGA+AGG | - | chr5_4:39787711-39787730 | Msa0850510:intron | 35.0% |
| ! | CGTCTTCTTATTTCTTAGTG+AGG | - | chr5_4:39787774-39787793 | Msa0850510:intron | 35.0% |
| AATGTTCAAGATGTCTCACA+TGG | - | chr5_4:39788233-39788252 | Msa0850510:intron | 35.0% | |
| TTTATCCAATCTCTGTTCAC+TGG | + | chr5_4:39788578-39788597 | None:intergenic | 35.0% | |
| CTATACTTCTTGCTTCAACT+TGG | - | chr5_4:39788768-39788787 | Msa0850510:intron | 35.0% | |
| TTCAGCTTTCTCCTCTAATT+TGG | + | chr5_4:39789064-39789083 | None:intergenic | 35.0% | |
| GAGAAAGCTGAAATTCTGTT+AGG | - | chr5_4:39789072-39789091 | Msa0850510:CDS | 35.0% | |
| !! | GTTAGGAAGTGTTAGATCAT+CGG | - | chr5_4:39789089-39789108 | Msa0850510:CDS | 35.0% |
| GGAAATTGATACTCTGCAAA+AGG | - | chr5_4:39789291-39789310 | Msa0850510:CDS | 35.0% | |
| AAAGGAGAGGATGAAAATAG+AGG | - | chr5_4:39789309-39789328 | Msa0850510:CDS | 35.0% | |
| ! | CATTTTGCAGCATAAAGAAC+AGG | - | chr5_4:39789399-39789418 | Msa0850510:intron | 35.0% |
| TAAAGAACAGGAAAAGAAGC+TGG | - | chr5_4:39789411-39789430 | Msa0850510:intron | 35.0% | |
| ! | AATAATGACCGATTCTGCAA+AGG | + | chr5_4:39789528-39789547 | None:intergenic | 35.0% |
| GTACATCAAGCACCTATTAT+AGG | + | chr5_4:39789686-39789705 | None:intergenic | 35.0% | |
| CTCATAACATGCATTTGAAC+AGG | - | chr5_4:39789719-39789738 | Msa0850510:CDS | 35.0% | |
| GAAGATGGAGATTGTCAAAT+TGG | - | chr5_4:39789776-39789795 | Msa0850510:intron | 35.0% | |
| !! | TTTGACCAATTTTAACCACC+AGG | - | chr5_4:39789861-39789880 | Msa0850510:intron | 35.0% |
| ! | CTTTGCACTCTGCAAATTTT+TGG | + | chr5_4:39789924-39789943 | None:intergenic | 35.0% |
| !! | GTAAATTACTCTTTTTGGGG+TGG | - | chr5_4:39790190-39790209 | Msa0850510:intron | 35.0% |
| GCATCACTACTTTCTTAGTA+TGG | - | chr5_4:39790252-39790271 | Msa0850510:CDS | 35.0% | |
| AATTAAGGTTACCTGGTGTT+TGG | + | chr5_4:39790307-39790326 | None:intergenic | 35.0% | |
| TGTAGATTGGACAGGAATTA+AGG | + | chr5_4:39790322-39790341 | None:intergenic | 35.0% | |
| TTAATTCCTGTCCAATCTAC+AGG | - | chr5_4:39790321-39790340 | Msa0850510:CDS | 35.0% | |
| CATATGAGTAACCTGTAGAT+TGG | + | chr5_4:39790335-39790354 | None:intergenic | 35.0% | |
| ATGCTTTAATCTGAGCTTCA+TGG | + | chr5_4:39790578-39790597 | None:intergenic | 35.0% | |
| !! | AAGCTCAGATTAAAGCATTG+AGG | - | chr5_4:39790580-39790599 | Msa0850510:CDS | 35.0% |
| ATCTCCAGAAATCCAAAGTA+TGG | - | chr5_4:39790646-39790665 | Msa0850510:CDS | 35.0% | |
| !! | TTTTCAGGAAGAAAGGCAAA+AGG | - | chr5_4:39790728-39790747 | Msa0850510:CDS | 35.0% |
| CCCAGAAGTTAATTCAAAAC+AGG | - | chr5_4:39790800-39790819 | Msa0850510:CDS | 35.0% | |
| !! | GTTGGCTTCAGTGATATTTT+TGG | + | chr5_4:39790947-39790966 | None:intergenic | 35.0% |
| CAGATTATTACCAAAGACAG+TGG | + | chr5_4:39791140-39791159 | None:intergenic | 35.0% | |
| AATAATCTGTCTGACTCAAC+AGG | - | chr5_4:39791151-39791170 | Msa0850510:CDS | 35.0% | |
| TCCAATGTAAAACCTTGAGA+GGG | + | chr5_4:39791825-39791844 | None:intergenic | 35.0% | |
| TAGTAGTTTCCTGCATGTAA+TGG | - | chr5_4:39792595-39792614 | Msa0850510:intron | 35.0% | |
| ! | CCGTTTCATCGATTAAAAGA+AGG | - | chr5_4:39792870-39792889 | Msa0850510:intron | 35.0% |
| ! | AAAAGAAGGAGTTCTTTTGG+TGG | - | chr5_4:39792884-39792903 | Msa0850510:intron | 35.0% |
| ! | GCTTCTATTTCTTCACAGTA+AGG | + | chr5_4:39793028-39793047 | None:intergenic | 35.0% |
| TCCACTTTCTTCAACAACTT+CGG | + | chr5_4:39793058-39793077 | None:intergenic | 35.0% | |
| CATTCCTAAGCATCATAGAA+AGG | - | chr5_4:39793105-39793124 | Msa0850510:CDS | 35.0% | |
| !!! | GTTCTAGGGGTATTTGTTTT+TGG | + | chr5_4:39793475-39793494 | None:intergenic | 35.0% |
| ! | TACCTTAACAACAGTTCTAG+GGG | + | chr5_4:39793488-39793507 | None:intergenic | 35.0% |
| ! | GCTGAAACTCTCCTTTTTAT+TGG | - | chr5_4:39793517-39793536 | Msa0850510:CDS | 35.0% |
| TGCACAACTCTTAACGAATA+TGG | - | chr5_4:39793589-39793608 | Msa0850510:CDS | 35.0% | |
| ! | TTTTCATTACCACACTATGC+TGG | - | chr5_4:39793664-39793683 | Msa0850510:intron | 35.0% |
| !!! | ATCGGTGATTTGTTTTCAGA+AGG | - | chr5_4:39794084-39794103 | Msa0850510:CDS | 35.0% |
| !!! | TCGGTGATTTGTTTTCAGAA+GGG | - | chr5_4:39794085-39794104 | Msa0850510:CDS | 35.0% |
| ATCGTTGTACGGTTCAACTT+TGG | - | chr5_4:39785583-39785602 | Msa0850510:CDS | 40.0% | |
| TCGTTGTACGGTTCAACTTT+GGG | - | chr5_4:39785584-39785603 | Msa0850510:CDS | 40.0% | |
| TCTTCAGATTCCGTTTCATC+GGG | - | chr5_4:39785647-39785666 | Msa0850510:intron | 40.0% | |
| TAACGAAAACGCGAAGCTTA+AGG | - | chr5_4:39786061-39786080 | Msa0850510:intron | 40.0% | |
| TCCTTGAAGCTAGATTCTAC+AGG | - | chr5_4:39786388-39786407 | Msa0850510:CDS | 40.0% | |
| CCTTGAAGCTAGATTCTACA+GGG | - | chr5_4:39786389-39786408 | Msa0850510:CDS | 40.0% | |
| GTTCTGTATGTGTGTGTGTT+TGG | - | chr5_4:39786773-39786792 | Msa0850510:CDS | 40.0% | |
| ! | ATTGATCTTTTGGTCACCCA+GGG | - | chr5_4:39786849-39786868 | Msa0850510:intron | 40.0% |
| TGTGAGTCTGATTTAGTGGT+AGG | - | chr5_4:39786955-39786974 | Msa0850510:intron | 40.0% | |
| GTGAGTCTGATTTAGTGGTA+GGG | - | chr5_4:39786956-39786975 | Msa0850510:intron | 40.0% | |
| TATGGAACTCTAGTGGAAGT+TGG | - | chr5_4:39787013-39787032 | Msa0850510:intron | 40.0% | |
| TGCTATCAAAGCTCTTGATC+TGG | - | chr5_4:39787269-39787288 | Msa0850510:intron | 40.0% | |
| GCTATCAAAGCTCTTGATCT+GGG | - | chr5_4:39787270-39787289 | Msa0850510:intron | 40.0% | |
| GTACTGAACCAAGCAATCAA+TGG | - | chr5_4:39787411-39787430 | Msa0850510:intron | 40.0% | |
| CGGTAATTCTAACATCCCTA+TGG | + | chr5_4:39787448-39787467 | None:intergenic | 40.0% | |
| GAATTGAATTGGCGCATTTG+TGG | - | chr5_4:39787481-39787500 | Msa0850510:intron | 40.0% | |
| TTGATGAGCAGAAAGGTCAT+TGG | + | chr5_4:39787537-39787556 | None:intergenic | 40.0% | |
| ! | TTGGTTGTTGATGAGCAGAA+AGG | + | chr5_4:39787544-39787563 | None:intergenic | 40.0% |
| ! | TTGGTGGTCTGTACTTTGAT+CGG | - | chr5_4:39787583-39787602 | Msa0850510:intron | 40.0% |
| TGTACTTTGATCGGGTAACT+AGG | - | chr5_4:39787592-39787611 | Msa0850510:intron | 40.0% | |
| TCAGACATCTTAAGTGTGCT+AGG | - | chr5_4:39787625-39787644 | Msa0850510:intron | 40.0% | |
| ATCTTAAGTGTGCTAGGCTA+TGG | - | chr5_4:39787631-39787650 | Msa0850510:intron | 40.0% | |
| CATGTTATGATGCCTGGAAA+AGG | + | chr5_4:39787704-39787723 | None:intergenic | 40.0% | |
| CGAAAACATGTTATGATGCC+TGG | + | chr5_4:39787710-39787729 | None:intergenic | 40.0% | |
| AAGATGTCTCACATGGTAGT+AGG | - | chr5_4:39788240-39788259 | Msa0850510:intron | 40.0% | |
| CATAACCAGTGAACAGAGAT+TGG | - | chr5_4:39788570-39788589 | Msa0850510:intron | 40.0% | |
| CAATCTTGAAGGATCACTTC+AGG | - | chr5_4:39788669-39788688 | Msa0850510:intron | 40.0% | |
| TAGCATGAAGCACATCATAC+TGG | + | chr5_4:39788834-39788853 | None:intergenic | 40.0% | |
| TGTGCTTCATGCTAAGTTCT+TGG | - | chr5_4:39788840-39788859 | Msa0850510:intron | 40.0% | |
| TGCTGAGAGAATTCAGCATT+TGG | - | chr5_4:39788984-39789003 | Msa0850510:intron | 40.0% | |
| TAGATCATCGGAGAACCAAA+TGG | - | chr5_4:39789101-39789120 | Msa0850510:CDS | 40.0% | |
| ! | GCTCAAAATTTCAGCTCTAG+AGG | - | chr5_4:39789213-39789232 | Msa0850510:intron | 40.0% |
| TTGATACTCTGCAAAAGGAG+AGG | - | chr5_4:39789296-39789315 | Msa0850510:CDS | 40.0% | |
| ATGGTATACAAACACCAGTC+AGG | + | chr5_4:39789489-39789508 | None:intergenic | 40.0% | |
| TTTGCATGCCTTTGCAGAAT+CGG | - | chr5_4:39789517-39789536 | Msa0850510:intron | 40.0% | |
| AATGGTAGAGAATAAGCAGC+TGG | - | chr5_4:39789596-39789615 | Msa0850510:intron | 40.0% | |
| ! | GATCAGGTGTTGCATATAAC+TGG | - | chr5_4:39789657-39789676 | Msa0850510:intron | 40.0% |
| AAGGCTATTGCAGCAATTGA+GGG | - | chr5_4:39789889-39789908 | Msa0850510:CDS | 40.0% | |
| CAGAGTGCAAAGAAGAATCA+AGG | - | chr5_4:39789932-39789951 | Msa0850510:intron | 40.0% | |
| TTGAGAAACATCCAAACACC+AGG | - | chr5_4:39790293-39790312 | Msa0850510:CDS | 40.0% | |
| AGCTGAAAATGAACTGAGAG+AGG | - | chr5_4:39790429-39790448 | Msa0850510:CDS | 40.0% | |
| CTACGTGTAATCAAGGAATC+AGG | + | chr5_4:39790532-39790551 | None:intergenic | 40.0% | |
| GTGAACTTGAAGATGAGTGT+AGG | - | chr5_4:39790604-39790623 | Msa0850510:CDS | 40.0% | |
| ! | TTAACTTCTGGGTCCTCTTT+TGG | + | chr5_4:39790792-39790811 | None:intergenic | 40.0% |
| AATGATCTGTCTGACTCAAC+AGG | - | chr5_4:39791304-39791323 | Msa0850510:intron | 40.0% | |
| ! | ATGTGTACATTGGCTATACC+TGG | - | chr5_4:39791421-39791440 | Msa0850510:intron | 40.0% |
| ! | TCTTTTGGTAGACAAGGTTC+TGG | - | chr5_4:39791455-39791474 | Msa0850510:intron | 40.0% |
| TGGAAATGACGACAAGGTTA+GGG | - | chr5_4:39791475-39791494 | Msa0850510:intron | 40.0% | |
| CAGCTGTGAACTTATTTGCT+TGG | - | chr5_4:39791576-39791595 | Msa0850510:intron | 40.0% | |
| ! | TCCCTCTCAAGGTTTTACAT+TGG | - | chr5_4:39791821-39791840 | Msa0850510:intron | 40.0% |
| CTCCAATGTAAAACCTTGAG+AGG | + | chr5_4:39791826-39791845 | None:intergenic | 40.0% | |
| AGTAGTAGAATTCGCTACGT+AGG | - | chr5_4:39791986-39792005 | Msa0850510:intron | 40.0% | |
| ! | GCTTTTTATCTCCTCTCCAT+AGG | - | chr5_4:39792997-39793016 | Msa0850510:intron | 40.0% |
| TCACAGTAAGGAGATTCCTA+TGG | + | chr5_4:39793016-39793035 | None:intergenic | 40.0% | |
| ! | CTGTGAAGAAATAGAAGCAC+CGG | - | chr5_4:39793030-39793049 | Msa0850510:intron | 40.0% |
| AAAGTGGAGAACGTAAAACC+AGG | - | chr5_4:39793070-39793089 | Msa0850510:CDS | 40.0% | |
| AACGTAAAACCAGGAAAAGC+AGG | - | chr5_4:39793079-39793098 | Msa0850510:CDS | 40.0% | |
| CTCACCTTTCTATGATGCTT+AGG | + | chr5_4:39793112-39793131 | None:intergenic | 40.0% | |
| CTCATTGAGTATAGGAGCAA+AGG | + | chr5_4:39793203-39793222 | None:intergenic | 40.0% | |
| GTTACCTGCTCATTGAGTAT+AGG | + | chr5_4:39793211-39793230 | None:intergenic | 40.0% | |
| ! | AACAAGTACTGTCTTGTTCG+AGG | - | chr5_4:39793288-39793307 | Msa0850510:CDS | 40.0% |
| CATTTCCACACCACATTTCT+TGG | - | chr5_4:39793366-39793385 | Msa0850510:intron | 40.0% | |
| GCAAATAAGAAGTCTGCACT+TGG | + | chr5_4:39793395-39793414 | None:intergenic | 40.0% | |
| TACCCCTAGAACTGTTGTTA+AGG | - | chr5_4:39793483-39793502 | Msa0850510:CDS | 40.0% | |
| TTTCATTGATGCAGAGTCAG+AGG | - | chr5_4:39794034-39794053 | Msa0850510:CDS | 40.0% | |
| TTCATTGATGCAGAGTCAGA+GGG | - | chr5_4:39794035-39794054 | Msa0850510:CDS | 40.0% | |
| CATCCTCGTCCTTCAAATAT+CGG | - | chr5_4:39794066-39794085 | Msa0850510:CDS | 40.0% | |
| GAATAGGGATCATCTGCATA+TGG | + | chr5_4:39794120-39794139 | None:intergenic | 40.0% | |
| TACCGAGACTCTTCAACAGT+TGG | - | chr5_4:39786163-39786182 | Msa0850510:intron | 45.0% | |
| AGCCAACTGTTGAAGAGTCT+CGG | + | chr5_4:39786168-39786187 | None:intergenic | 45.0% | |
| TTGGCTGGTATCGTTCAAGA+TGG | - | chr5_4:39786182-39786201 | Msa0850510:CDS | 45.0% | |
| ! | CCCTGTAGAATCTAGCTTCA+AGG | + | chr5_4:39786392-39786411 | None:intergenic | 45.0% |
| ! | CATTGATCTTTTGGTCACCC+AGG | - | chr5_4:39786848-39786867 | Msa0850510:intron | 45.0% |
| ! | TCTAACATCCCTATGGTGGA+GGG | + | chr5_4:39787441-39787460 | None:intergenic | 45.0% |
| TTCTAACATCCCTATGGTGG+AGG | + | chr5_4:39787442-39787461 | None:intergenic | 45.0% | |
| TGTGGAGACCATCGAGAATA+TGG | - | chr5_4:39787499-39787518 | Msa0850510:intron | 45.0% | |
| !! | TGAGGAGTTCTAGATGGCTT+TGG | + | chr5_4:39787563-39787582 | None:intergenic | 45.0% |
| ! | AGCCATCTAGAACTCCTCAT+TGG | - | chr5_4:39787564-39787583 | Msa0850510:intron | 45.0% |
| !! | CACCAATGAGGAGTTCTAGA+TGG | + | chr5_4:39787569-39787588 | None:intergenic | 45.0% |
| ! | CATCTAGAACTCCTCATTGG+TGG | - | chr5_4:39787567-39787586 | Msa0850510:intron | 45.0% |
| CAAAGTACAGACCACCAATG+AGG | + | chr5_4:39787581-39787600 | None:intergenic | 45.0% | |
| TGGTGGTCTGTACTTTGATC+GGG | - | chr5_4:39787584-39787603 | Msa0850510:intron | 45.0% | |
| CTTTGATCGGGTAACTAGGT+AGG | - | chr5_4:39787596-39787615 | Msa0850510:intron | 45.0% | |
| TATGGTCTGACTCATACAGC+TGG | - | chr5_4:39787649-39787668 | Msa0850510:intron | 45.0% | |
| AGTGAGGTTTAAGGACGACT+TGG | - | chr5_4:39787790-39787809 | Msa0850510:intron | 45.0% | |
| GTGAGGTTTAAGGACGACTT+GGG | - | chr5_4:39787791-39787810 | Msa0850510:intron | 45.0% | |
| !! | TGCTGTGAAAGTGTGGCTTT+TGG | + | chr5_4:39787818-39787837 | None:intergenic | 45.0% |
| ACACTTTCACAGCATGACCT+GGG | - | chr5_4:39787824-39787843 | Msa0850510:intron | 45.0% | |
| GACAAGAATTGTTTGGACCC+AGG | + | chr5_4:39787844-39787863 | None:intergenic | 45.0% | |
| GCTGATCTTGCTGAAAAGCT+TGG | - | chr5_4:39788625-39788644 | Msa0850510:intron | 45.0% | |
| TGAAGGATCACTTCAGGAGA+TGG | - | chr5_4:39788675-39788694 | Msa0850510:intron | 45.0% | |
| !! | AGAAAGTGTCTCTTTCGTGC+TGG | + | chr5_4:39788795-39788814 | None:intergenic | 45.0% |
| CTCTGTATACTGTGCTACAG+TGG | + | chr5_4:39788950-39788969 | None:intergenic | 45.0% | |
| CTAAGACGTTTCGAAGCTGT+AGG | + | chr5_4:39789363-39789382 | None:intergenic | 45.0% | |
| ACAGCTTCGAAACGTCTTAG+AGG | - | chr5_4:39789363-39789382 | Msa0850510:intron | 45.0% | |
| GTCAGCCTGGTGGTTAAAAT+TGG | + | chr5_4:39789869-39789888 | None:intergenic | 45.0% | |
| ! | TTTTAACCACCAGGCTGACA+AGG | - | chr5_4:39789870-39789889 | Msa0850510:CDS | 45.0% |
| CAAGGCTATTGCAGCAATTG+AGG | - | chr5_4:39789888-39789907 | Msa0850510:CDS | 45.0% | |
| CTATTGCAGCAATTGAGGGA+AGG | - | chr5_4:39789893-39789912 | Msa0850510:CDS | 45.0% | |
| ! | GAAGCAGTTGATGCACATTC+AGG | - | chr5_4:39789954-39789973 | Msa0850510:intron | 45.0% |
| GGACAGGAATTAAGGTTACC+TGG | + | chr5_4:39790314-39790333 | None:intergenic | 45.0% | |
| GAGTAACCTGTAGATTGGAC+AGG | + | chr5_4:39790330-39790349 | None:intergenic | 45.0% | |
| ACAGGTTACTCATATGCAGC+AGG | - | chr5_4:39790339-39790358 | Msa0850510:CDS | 45.0% | |
| TGCAGCAGGAACATGATAAG+AGG | - | chr5_4:39790353-39790372 | Msa0850510:CDS | 45.0% | |
| TTTCACTGTGTTCAGCTTGC+AGG | + | chr5_4:39790387-39790406 | None:intergenic | 45.0% | |
| TGAGTGTAGGAAGCTAGAAG+AGG | - | chr5_4:39790617-39790636 | Msa0850510:CDS | 45.0% | |
| GATGAGTGACAAGCCAAAAG+AGG | - | chr5_4:39790776-39790795 | Msa0850510:CDS | 45.0% | |
| AACAGGCTCTACGGAATAGT+AGG | - | chr5_4:39791168-39791187 | Msa0850510:CDS | 45.0% | |
| ! | CTAGTGATTGCTGACTGCAT+TGG | - | chr5_4:39791227-39791246 | Msa0850510:intron | 45.0% |
| !! | AACAGGCTCTAGGGAATAGT+AGG | - | chr5_4:39791321-39791340 | Msa0850510:intron | 45.0% |
| !! | ACAGGCTCTAGGGAATAGTA+GGG | - | chr5_4:39791322-39791341 | Msa0850510:intron | 45.0% |
| TCTACCAAAAGATCCCGCAT+TGG | + | chr5_4:39791447-39791466 | None:intergenic | 45.0% | |
| !! | AGGTTCTGGAAATGACGACA+AGG | - | chr5_4:39791469-39791488 | Msa0850510:intron | 45.0% |
| CTGGAAATGACGACAAGGTT+AGG | - | chr5_4:39791474-39791493 | Msa0850510:intron | 45.0% | |
| AACAACAGAGTTCCCTCTCA+AGG | - | chr5_4:39791810-39791829 | Msa0850510:intron | 45.0% | |
| !! | GGAGTTCTTTTGGTGGCAAA+AGG | - | chr5_4:39792891-39792910 | Msa0850510:intron | 45.0% |
| GTAAGGAGATTCCTATGGAG+AGG | + | chr5_4:39793011-39793030 | None:intergenic | 45.0% | |
| TTCTTCAACAACTTCGGCAC+CGG | + | chr5_4:39793052-39793071 | None:intergenic | 45.0% | |
| GCCGAAGTTGTTGAAGAAAG+TGG | - | chr5_4:39793054-39793073 | Msa0850510:CDS | 45.0% | |
| GTAAAACCAGGAAAAGCAGG+AGG | - | chr5_4:39793082-39793101 | Msa0850510:CDS | 45.0% | |
| TGCTCCTATACTCAATGAGC+AGG | - | chr5_4:39793204-39793223 | Msa0850510:intron | 45.0% | |
| CACTTGGAAGCCAAGAAATG+TGG | + | chr5_4:39793379-39793398 | None:intergenic | 45.0% | |
| TTAGTAGCACCAGCATAGTG+TGG | + | chr5_4:39793676-39793695 | None:intergenic | 45.0% | |
| CGATATTTGAAGGACGAGGA+TGG | + | chr5_4:39794068-39794087 | None:intergenic | 45.0% | |
| TCACCGATATTTGAAGGACG+AGG | + | chr5_4:39794072-39794091 | None:intergenic | 45.0% | |
| !!! | TTTTTTTTTTTTTTTTTGAA+TGG | + | chr5_4:39788040-39788059 | None:intergenic | 5.0% |
| !! | AATATTAATATAAAACTATT+TGG | - | chr5_4:39788305-39788324 | Msa0850510:intron | 5.0% |
| !!! | TTTTAAATATGTTTAAATTA+AGG | - | chr5_4:39791038-39791057 | Msa0850510:CDS | 5.0% |
| !! | TTTAAATATGTTTAAATTAA+GGG | - | chr5_4:39791039-39791058 | Msa0850510:CDS | 5.0% |
| AGGCTCTTCGAGGTTGGAAT+TGG | + | chr5_4:39785551-39785570 | None:intergenic | 50.0% | |
| GAATCTATCGAGGCTCTTCG+AGG | + | chr5_4:39785561-39785580 | None:intergenic | 50.0% | |
| ! | GCAGAGATCGATGACGGTAA+CGG | + | chr5_4:39785620-39785639 | None:intergenic | 50.0% |
| CGCGAAACTTCCCGATGAAA+CGG | + | chr5_4:39785660-39785679 | None:intergenic | 50.0% | |
| ACGCGAAGCTTAAGGTGAAG+CGG | - | chr5_4:39786069-39786088 | Msa0850510:intron | 50.0% | |
| GAAGCTTAAGGTGAAGCGGA+AGG | - | chr5_4:39786073-39786092 | Msa0850510:intron | 50.0% | |
| GAGACTCTTCAACAGTTGGC+TGG | - | chr5_4:39786167-39786186 | Msa0850510:intron | 50.0% | |
| ! | TAACATCCCTATGGTGGAGG+GGG | + | chr5_4:39787439-39787458 | None:intergenic | 50.0% |
| ! | CTAACATCCCTATGGTGGAG+GGG | + | chr5_4:39787440-39787459 | None:intergenic | 50.0% |
| TCGGGTAACTAGGTAGGTCA+CGG | - | chr5_4:39787602-39787621 | Msa0850510:intron | 50.0% | |
| CAGGTCATGCTGTGAAAGTG+TGG | + | chr5_4:39787825-39787844 | None:intergenic | 50.0% | |
| CACACTTTCACAGCATGACC+TGG | - | chr5_4:39787823-39787842 | Msa0850510:intron | 50.0% | |
| ! | ACTGTGCTACAGTGGACTCT+TGG | + | chr5_4:39788942-39788961 | None:intergenic | 50.0% |
| GCTGGAAGATCAGATCACAG+AGG | - | chr5_4:39789429-39789448 | Msa0850510:intron | 50.0% | |
| GCATGCTGCAATTTCCTGAC+TGG | - | chr5_4:39789472-39789491 | Msa0850510:intron | 50.0% | |
| ! | GCAGTTGATGCACATTCAGG+AGG | - | chr5_4:39789957-39789976 | Msa0850510:intron | 50.0% |
| GTCTAGTCACAGCACACATG+TGG | + | chr5_4:39790223-39790242 | None:intergenic | 50.0% | |
| AGGCTTTGCTGCAGTTGCAA+TGG | - | chr5_4:39790748-39790767 | Msa0850510:CDS | 50.0% | |
| GATAAGGTCGCCACTGTCTT+TGG | - | chr5_4:39791127-39791146 | Msa0850510:CDS | 50.0% | |
| GTCTGACTCAACAGGCTCTA+CGG | - | chr5_4:39791159-39791178 | Msa0850510:CDS | 50.0% | |
| TGTCTGACTCAACAGGCTCT+AGG | - | chr5_4:39791158-39791177 | Msa0850510:CDS | 50.0% | |
| GTCTGACTCAACAGGCTCTA+GGG | - | chr5_4:39791159-39791178 | Msa0850510:CDS | 50.0% | |
| TTGGCTATACCTGGCCAATG+CGG | - | chr5_4:39791430-39791449 | Msa0850510:intron | 50.0% | |
| ! | GCGGGATCTTTTGGTAGACA+AGG | - | chr5_4:39791449-39791468 | Msa0850510:intron | 50.0% |
| GGAAGCCAAGAAATGTGGTG+TGG | + | chr5_4:39793374-39793393 | None:intergenic | 50.0% | |
| CTATCGAGGCTCTTCGAGGT+TGG | + | chr5_4:39785557-39785576 | None:intergenic | 55.0% | |
| TGACGCGCAGAGATCGATGA+CGG | + | chr5_4:39785626-39785645 | None:intergenic | 55.0% | |
| ! | GCGAATCTGAAGCTAACCGC+AGG | - | chr5_4:39785677-39785696 | Msa0850510:intron | 55.0% |
| ! | AGGGGGAGCCATTGATTGCT+TGG | + | chr5_4:39787422-39787441 | None:intergenic | 55.0% |
| !! | CAATAGCCTTGTCAGCCTGG+TGG | + | chr5_4:39789879-39789898 | None:intergenic | 55.0% |
| !! | CTGCAATAGCCTTGTCAGCC+TGG | + | chr5_4:39789882-39789901 | None:intergenic | 55.0% |
| TCAGGAGGAACACGCTAAGC+TGG | - | chr5_4:39789972-39789991 | Msa0850510:intron | 55.0% | |
| GGAGACAGACACAGAGAGAC+TGG | + | chr5_4:39790839-39790858 | None:intergenic | 55.0% | |
| CATAGGGTCGCTACTGTCTG+CGG | - | chr5_4:39791280-39791299 | Msa0850510:intron | 55.0% | |
| TGGCTATACCTGGCCAATGC+GGG | - | chr5_4:39791431-39791450 | Msa0850510:intron | 55.0% | |
| ! | CAAAAGATCCCGCATTGGCC+AGG | + | chr5_4:39791442-39791461 | None:intergenic | 55.0% |
| ! | CTGGCCAATGCGGGATCTTT+TGG | - | chr5_4:39791440-39791459 | Msa0850510:intron | 55.0% |
| !! | GGAATGCCTCCTGCTTTTCC+TGG | + | chr5_4:39793091-39793110 | None:intergenic | 55.0% |
| AATGGCTCCCCCTCCACCAT+AGG | - | chr5_4:39787429-39787448 | Msa0850510:intron | 60.0% | |
| ATGGCTCCCCCTCCACCATA+GGG | - | chr5_4:39787430-39787449 | Msa0850510:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 39785527 | 39794149 | 39785527 | ID=Msa0850510;Name=Msa0850510 |
| chr5_4 | mRNA | 39785527 | 39794149 | 39785527 | ID=Msa0850510-mRNA-1;Parent=Msa0850510;Name=Msa0850510-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0.41|0.16|1|1|1|18|0|885 |
| chr5_4 | exon | 39793978 | 39794149 | 39793978 | ID=Msa0850510-mRNA-1:exon:12629;Parent=Msa0850510-mRNA-1 |
| chr5_4 | exon | 39793818 | 39793867 | 39793818 | ID=Msa0850510-mRNA-1:exon:12628;Parent=Msa0850510-mRNA-1 |
| chr5_4 | exon | 39793473 | 39793680 | 39793473 | ID=Msa0850510-mRNA-1:exon:12627;Parent=Msa0850510-mRNA-1 |
| chr5_4 | exon | 39793249 | 39793374 | 39793249 | ID=Msa0850510-mRNA-1:exon:12626;Parent=Msa0850510-mRNA-1 |
| chr5_4 | exon | 39793045 | 39793143 | 39793045 | ID=Msa0850510-mRNA-1:exon:12625;Parent=Msa0850510-mRNA-1 |
| chr5_4 | exon | 39790554 | 39791230 | 39790554 | ID=Msa0850510-mRNA-1:exon:12624;Parent=Msa0850510-mRNA-1 |
| chr5_4 | exon | 39790226 | 39790474 | 39790226 | ID=Msa0850510-mRNA-1:exon:12623;Parent=Msa0850510-mRNA-1 |
| chr5_4 | exon | 39790014 | 39790142 | 39790014 | ID=Msa0850510-mRNA-1:exon:12622;Parent=Msa0850510-mRNA-1 |
| chr5_4 | exon | 39789867 | 39789935 | 39789867 | ID=Msa0850510-mRNA-1:exon:12621;Parent=Msa0850510-mRNA-1 |
| chr5_4 | exon | 39789683 | 39789793 | 39789683 | ID=Msa0850510-mRNA-1:exon:12620;Parent=Msa0850510-mRNA-1 |
| chr5_4 | exon | 39789226 | 39789333 | 39789226 | ID=Msa0850510-mRNA-1:exon:12619;Parent=Msa0850510-mRNA-1 |
| chr5_4 | exon | 39789014 | 39789124 | 39789014 | ID=Msa0850510-mRNA-1:exon:12618;Parent=Msa0850510-mRNA-1 |
| chr5_4 | exon | 39788855 | 39788941 | 39788855 | ID=Msa0850510-mRNA-1:exon:12617;Parent=Msa0850510-mRNA-1 |
| chr5_4 | exon | 39786748 | 39786813 | 39786748 | ID=Msa0850510-mRNA-1:exon:12616;Parent=Msa0850510-mRNA-1 |
| chr5_4 | exon | 39786550 | 39786657 | 39786550 | ID=Msa0850510-mRNA-1:exon:12615;Parent=Msa0850510-mRNA-1 |
| chr5_4 | exon | 39786325 | 39786450 | 39786325 | ID=Msa0850510-mRNA-1:exon:12614;Parent=Msa0850510-mRNA-1 |
| chr5_4 | exon | 39786172 | 39786231 | 39786172 | ID=Msa0850510-mRNA-1:exon:12613;Parent=Msa0850510-mRNA-1 |
| chr5_4 | exon | 39785527 | 39785628 | 39785527 | ID=Msa0850510-mRNA-1:exon:12612;Parent=Msa0850510-mRNA-1 |
| chr5_4 | CDS | 39793978 | 39794149 | 39793978 | ID=Msa0850510-mRNA-1:cds;Parent=Msa0850510-mRNA-1 |
| chr5_4 | CDS | 39793818 | 39793867 | 39793818 | ID=Msa0850510-mRNA-1:cds;Parent=Msa0850510-mRNA-1 |
| chr5_4 | CDS | 39793473 | 39793680 | 39793473 | ID=Msa0850510-mRNA-1:cds;Parent=Msa0850510-mRNA-1 |
| chr5_4 | CDS | 39793249 | 39793374 | 39793249 | ID=Msa0850510-mRNA-1:cds;Parent=Msa0850510-mRNA-1 |
| chr5_4 | CDS | 39793045 | 39793143 | 39793045 | ID=Msa0850510-mRNA-1:cds;Parent=Msa0850510-mRNA-1 |
| chr5_4 | CDS | 39790554 | 39791230 | 39790554 | ID=Msa0850510-mRNA-1:cds;Parent=Msa0850510-mRNA-1 |
| chr5_4 | CDS | 39790226 | 39790474 | 39790226 | ID=Msa0850510-mRNA-1:cds;Parent=Msa0850510-mRNA-1 |
| chr5_4 | CDS | 39790014 | 39790142 | 39790014 | ID=Msa0850510-mRNA-1:cds;Parent=Msa0850510-mRNA-1 |
| chr5_4 | CDS | 39789867 | 39789935 | 39789867 | ID=Msa0850510-mRNA-1:cds;Parent=Msa0850510-mRNA-1 |
| chr5_4 | CDS | 39789683 | 39789793 | 39789683 | ID=Msa0850510-mRNA-1:cds;Parent=Msa0850510-mRNA-1 |
| chr5_4 | CDS | 39789226 | 39789333 | 39789226 | ID=Msa0850510-mRNA-1:cds;Parent=Msa0850510-mRNA-1 |
| chr5_4 | CDS | 39789014 | 39789124 | 39789014 | ID=Msa0850510-mRNA-1:cds;Parent=Msa0850510-mRNA-1 |
| chr5_4 | CDS | 39788855 | 39788941 | 39788855 | ID=Msa0850510-mRNA-1:cds;Parent=Msa0850510-mRNA-1 |
| chr5_4 | CDS | 39786748 | 39786813 | 39786748 | ID=Msa0850510-mRNA-1:cds;Parent=Msa0850510-mRNA-1 |
| chr5_4 | CDS | 39786550 | 39786657 | 39786550 | ID=Msa0850510-mRNA-1:cds;Parent=Msa0850510-mRNA-1 |
| chr5_4 | CDS | 39786325 | 39786450 | 39786325 | ID=Msa0850510-mRNA-1:cds;Parent=Msa0850510-mRNA-1 |
| chr5_4 | CDS | 39786172 | 39786231 | 39786172 | ID=Msa0850510-mRNA-1:cds;Parent=Msa0850510-mRNA-1 |
| chr5_4 | CDS | 39785527 | 39785628 | 39785527 | ID=Msa0850510-mRNA-1:cds;Parent=Msa0850510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
