Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0810030 | XP_024639642.1 | 93.778 | 884 | 40 | 2 | 1 | 883 | 1 | 870 | 0.0 | 1617 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0810030 | sp|Q9LME2|SYCP1_ARATH | 49.387 | 897 | 414 | 11 | 1 | 883 | 1 | 871 | 0.0 | 779 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0810030 | G7KB78 | 89.457 | 920 | 43 | 2 | 1 | 883 | 1 | 903 | 0.0 | 1589 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017390 | Msa0810030 | 0.807295 | 5.420809e-50 | -8.615850e-47 |
| Msa0035130 | Msa0810030 | 0.802244 | 6.149611e-49 | -8.615850e-47 |
| Msa0081650 | Msa0810030 | 0.800482 | 1.412021e-48 | -8.615850e-47 |
| Msa0103250 | Msa0810030 | 0.806580 | 7.678398e-50 | -8.615850e-47 |
| Msa0106620 | Msa0810030 | 0.833523 | 5.078937e-56 | -8.615850e-47 |
| Msa0106710 | Msa0810030 | 0.840865 | 6.719494e-58 | -8.615850e-47 |
| Msa0613340 | Msa0810030 | 0.802047 | 6.751271e-49 | -8.615850e-47 |
| Msa0618470 | Msa0810030 | 0.811318 | 7.432597e-51 | -8.615850e-47 |
| Msa0618970 | Msa0810030 | 0.807651 | 4.554385e-50 | -8.615850e-47 |
| Msa0628420 | Msa0810030 | 0.805929 | 1.052673e-49 | -8.615850e-47 |
| Msa0638350 | Msa0810030 | 0.804413 | 2.186529e-49 | -8.615850e-47 |
| Msa0702720 | Msa0810030 | 0.805393 | 1.364226e-49 | -8.615850e-47 |
| Msa0703440 | Msa0810030 | 0.820677 | 6.043803e-53 | -8.615850e-47 |
| Msa0705390 | Msa0810030 | 0.801657 | 8.119686e-49 | -8.615850e-47 |
| Msa0707250 | Msa0810030 | 0.802358 | 5.825822e-49 | -8.615850e-47 |
| Msa0748920 | Msa0810030 | 0.809214 | 2.113884e-50 | -8.615850e-47 |
| Msa0810030 | Msa0844420 | 0.812927 | 3.314383e-51 | -8.615850e-47 |
| Msa0810030 | Msa0849440 | 0.802769 | 4.793702e-49 | -8.615850e-47 |
| Msa0810030 | Msa0850510 | 0.876400 | 1.439580e-68 | -8.615850e-47 |
| Msa0810030 | Msa0903780 | 0.841541 | 4.463790e-58 | -8.615850e-47 |
| Msa0810030 | Msa0944660 | 0.824773 | 6.730698e-54 | -8.615850e-47 |
| Msa0810030 | Msa1001390 | 0.812711 | 3.695326e-51 | -8.615850e-47 |
| Msa0810030 | Msa1028590 | 0.817147 | 3.833950e-52 | -8.615850e-47 |
| Msa0810030 | Msa1034310 | 0.823621 | 1.254945e-53 | -8.615850e-47 |
| Msa0810030 | Msa1034500 | 0.801425 | 9.057263e-49 | -8.615850e-47 |
| Msa0810030 | Msa1079230 | 0.802703 | 4.947490e-49 | -8.615850e-47 |
| Msa0810030 | Msa1089450 | 0.812049 | 5.154322e-51 | -8.615850e-47 |
| Msa0810030 | Msa1127590 | 0.803624 | 3.189060e-49 | -8.615850e-47 |
| Msa0810030 | Msa1173300 | 0.813741 | 2.195756e-51 | -8.615850e-47 |
| Msa0810030 | Msa1219000 | 0.819801 | 9.598722e-53 | -8.615850e-47 |
| Msa0810030 | Msa1226470 | 0.804100 | 2.539635e-49 | -8.615850e-47 |
| Msa0810030 | Msa1265590 | 0.832400 | 9.660707e-56 | -8.615850e-47 |
| Msa0810030 | Msa1275590 | 0.844582 | 6.912762e-59 | -8.615850e-47 |
| Msa0810030 | Msa1332760 | 0.804768 | 1.843152e-49 | -8.615850e-47 |
| Msa0810030 | Msa1369690 | 0.827360 | 1.633539e-54 | -8.615850e-47 |
| Msa0810030 | Msa1369890 | 0.801320 | 9.518049e-49 | -8.615850e-47 |
| Msa0810030 | Msa1416370 | 0.817883 | 2.617628e-52 | -8.615850e-47 |
| Msa0810030 | Msa1418240 | 0.811920 | 5.498480e-51 | -8.615850e-47 |
| Msa0810030 | Msa1437270 | 0.840960 | 6.344595e-58 | -8.615850e-47 |
| Msa0810030 | Msa1440310 | 0.804906 | 1.725307e-49 | -8.615850e-47 |
| Msa0810030 | Msa1447180 | 0.807726 | 4.389790e-50 | -8.615850e-47 |
| Msa0188350 | Msa0810030 | 0.814693 | 1.352722e-51 | -8.615850e-47 |
| Msa0189040 | Msa0810030 | 0.815492 | 8.990404e-52 | -8.615850e-47 |
| Msa0207350 | Msa0810030 | 0.804650 | 1.950767e-49 | -8.615850e-47 |
| Msa0223230 | Msa0810030 | 0.806348 | 8.591916e-50 | -8.615850e-47 |
| Msa0237210 | Msa0810030 | 0.805204 | 1.494277e-49 | -8.615850e-47 |
| Msa0426760 | Msa0810030 | 0.817876 | 2.626626e-52 | -8.615850e-47 |
| Msa0428580 | Msa0810030 | 0.803051 | 4.191921e-49 | -8.615850e-47 |
| Msa0432160 | Msa0810030 | 0.802077 | 6.658151e-49 | -8.615850e-47 |
| Msa0450400 | Msa0810030 | -0.837474 | 5.087164e-57 | -8.615850e-47 |
| Msa0450480 | Msa0810030 | 0.800917 | 1.151080e-48 | -8.615850e-47 |
| Msa0476680 | Msa0810030 | 0.803910 | 2.781884e-49 | -8.615850e-47 |
| Msa0481970 | Msa0810030 | 0.829142 | 6.074059e-55 | -8.615850e-47 |
| Msa0241140 | Msa0810030 | 0.817381 | 3.395737e-52 | -8.615850e-47 |
| Msa0241830 | Msa0810030 | 0.803772 | 2.972255e-49 | -8.615850e-47 |
| Msa0249580 | Msa0810030 | 0.837397 | 5.325279e-57 | -8.615850e-47 |
| Msa0257490 | Msa0810030 | 0.807128 | 5.881108e-50 | -8.615850e-47 |
| Msa0279850 | Msa0810030 | 0.830641 | 2.619381e-55 | -8.615850e-47 |
| Msa0283420 | Msa0810030 | 0.806891 | 6.599644e-50 | -8.615850e-47 |
| Msa0296820 | Msa0810030 | 0.827892 | 1.216924e-54 | -8.615850e-47 |
| Msa0300320 | Msa0810030 | 0.805633 | 1.214621e-49 | -8.615850e-47 |
| Msa0315690 | Msa0810030 | 0.800320 | 1.523013e-48 | -8.615850e-47 |
| Msa0317970 | Msa0810030 | 0.825193 | 5.357840e-54 | -8.615850e-47 |
| Msa0322900 | Msa0810030 | 0.820644 | 6.150770e-53 | -8.615850e-47 |
| Msa0326480 | Msa0810030 | 0.816197 | 6.260412e-52 | -8.615850e-47 |
| Msa0341690 | Msa0810030 | 0.804936 | 1.700595e-49 | -8.615850e-47 |
| Msa0485240 | Msa0810030 | 0.814360 | 1.602702e-51 | -8.615850e-47 |
| Msa0518030 | Msa0810030 | 0.801158 | 1.027611e-48 | -8.615850e-47 |
| Msa0521010 | Msa0810030 | 0.803978 | 2.693322e-49 | -8.615850e-47 |
| Msa0521670 | Msa0810030 | 0.807744 | 4.352963e-50 | -8.615850e-47 |
| Msa0531250 | Msa0810030 | 0.803651 | 3.148511e-49 | -8.615850e-47 |
| Msa0532980 | Msa0810030 | 0.812897 | 3.364687e-51 | -8.615850e-47 |
| Msa0547990 | Msa0810030 | 0.803174 | 3.954435e-49 | -8.615850e-47 |
| Msa0548150 | Msa0810030 | 0.803689 | 3.092130e-49 | -8.615850e-47 |
| Msa0588090 | Msa0810030 | 0.802314 | 5.950274e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0810030 | MtrunA17_Chr5g0426011 | 91.791 | 536 | 20 | 1 | 219 | 730 | 1 | 536 | 0.0 | 962 |
| Msa0810030 | MtrunA17_Chr5g0426021 | 80.632 | 253 | 12 | 1 | 1 | 216 | 1 | 253 | 6.18e-111 | 340 |
| Msa0810030 | MtrunA17_Chr5g0426001 | 78.378 | 185 | 8 | 2 | 731 | 883 | 2 | 186 | 1.31e-94 | 295 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0810030 | AT1G22260.1 | 49.387 | 897 | 414 | 11 | 1 | 883 | 1 | 871 | 0.0 | 779 |
| Msa0810030 | AT1G22275.1 | 48.365 | 887 | 423 | 9 | 1 | 883 | 1 | 856 | 0.0 | 763 |
| Msa0810030 | AT1G22260.3 | 48.721 | 860 | 400 | 9 | 1 | 830 | 1 | 849 | 0.0 | 719 |
| Msa0810030 | AT1G22275.2 | 48.426 | 826 | 406 | 7 | 1 | 823 | 1 | 809 | 0.0 | 702 |
| Msa0810030 | AT1G22260.2 | 48.166 | 818 | 391 | 9 | 80 | 883 | 1 | 799 | 0.0 | 695 |
| Msa0810030 | AT1G22275.3 | 48.494 | 664 | 335 | 2 | 1 | 664 | 1 | 657 | 0.0 | 558 |
Find 130 sgRNAs with CRISPR-Local
Find 419 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTCCATACTTTGGATTTC+TGG | 0.106313 | 5_3:+37949663 | None:intergenic |
| TTCAGCTTTCTCCTCTAATT+TGG | 0.139130 | 5_3:+37951252 | None:intergenic |
| TCGTTGTACGGTTCAGTTTC+CGG | 0.184082 | 5_3:-37954729 | Msa0810030:CDS |
| TTAACTTCTGGGTCCTCTTT+TGG | 0.227517 | 5_3:+37949524 | None:intergenic |
| ATTACCTTAACAACAGTTCT+AGG | 0.252326 | 5_3:+37946851 | None:intergenic |
| GAAGATGGAGATTGTCAAAT+TGG | 0.257968 | 5_3:-37950537 | Msa0810030:CDS |
| ATCCCTATTCATTTGATTAG+AGG | 0.263251 | 5_3:-37946208 | None:intergenic |
| AATTCTCAACTTCATATTCA+TGG | 0.284847 | 5_3:+37947104 | None:intergenic |
| AGGCTATTAATGACATTAAA+AGG | 0.286706 | 5_3:-37950574 | Msa0810030:CDS |
| AGTCACAATTTCCAAATTAG+AGG | 0.303525 | 5_3:-37951263 | Msa0810030:CDS |
| TTTCACTGTGTTCAGCTTGC+AGG | 0.305499 | 5_3:+37949929 | None:intergenic |
| GTACCTCTAATCAAATGAAT+AGG | 0.312563 | 5_3:+37946205 | None:intergenic |
| ATTAAAAGAAGGAGTTCTTT+TGG | 0.324408 | 5_3:-37947458 | Msa0810030:CDS |
| ATGCTTTAATCTGAGCTTCA+TGG | 0.325526 | 5_3:+37949738 | None:intergenic |
| GGCTGAAAGCAAAGAAAATA+TGG | 0.327501 | 5_3:-37951079 | Msa0810030:CDS |
| TGATAACGGTTTCGCGGTTC+CGG | 0.327526 | 5_3:+37954710 | None:intergenic |
| CCCTGTAGAATCTAGCTTCA+AGG | 0.329259 | 5_3:+37953924 | None:intergenic |
| TGTGCTTCATGCTAAGTTCT+TGG | 0.345671 | 5_3:-37951473 | Msa0810030:CDS |
| GGAAGGAAGATGAGAAATTA+TGG | 0.348931 | 5_3:-37954223 | Msa0810030:CDS |
| ACAGCTTCGAAACGTCTTAG+AGG | 0.351938 | 5_3:-37950950 | Msa0810030:CDS |
| TAATTCATGTGTACATCTAT+AGG | 0.361480 | 5_3:+37946995 | None:intergenic |
| CATGTTAACTTCTAGTAGAT+TGG | 0.371843 | 5_3:-37951842 | Msa0810030:CDS |
| GAAGCAGTTGATGCACATTC+AGG | 0.372712 | 5_3:-37950359 | Msa0810030:CDS |
| TAACGAAAACGCGAAGCTTA+AGG | 0.376984 | 5_3:-37954252 | Msa0810030:CDS |
| GTCTTCTAAATTCTTTATCA+TGG | 0.377090 | 5_3:+37951864 | None:intergenic |
| TACCTCTAATCAAATGAATA+GGG | 0.383833 | 5_3:+37946206 | None:intergenic |
| GAAGTATGAATTAGAGAAGA+TGG | 0.391033 | 5_3:-37950552 | Msa0810030:CDS |
| TATGAAGTTGAGAATTCTAA+TGG | 0.391128 | 5_3:-37947097 | Msa0810030:CDS |
| CCCAGAAGTTAATTCAAAAC+AGG | 0.404035 | 5_3:-37949513 | Msa0810030:intron |
| TGAAATTTGCTGCTGAAGAA+AGG | 0.404224 | 5_3:-37953759 | Msa0810030:CDS |
| CATCCTCGTCCTTCAAATAT+CGG | 0.405068 | 5_3:-37946272 | Msa0810030:CDS |
| CAATCTTGAAGGATCACTTC+AGG | 0.408264 | 5_3:-37951644 | Msa0810030:CDS |
| AGAGAATTTGAACTCAAAGT+TGG | 0.408824 | 5_3:-37951815 | Msa0810030:CDS |
| GAGAAAGCTGAAATTCTGTT+AGG | 0.410708 | 5_3:-37951241 | Msa0810030:CDS |
| CTATACTTCTTGCTTCAACT+TGG | 0.417563 | 5_3:-37951545 | Msa0810030:CDS |
| CATAACCAGTGAACAGAGAT+TGG | 0.417582 | 5_3:-37951743 | Msa0810030:CDS |
| TACCCCTAGAACTGTTGTTA+AGG | 0.431512 | 5_3:-37946855 | Msa0810030:intron |
| GCGTCTTGTTATAGCTGAAA+AGG | 0.432285 | 5_3:-37954025 | Msa0810030:intron |
| GCTTCTATTTCTTCACAGTA+AGG | 0.438225 | 5_3:+37947314 | None:intergenic |
| CGTAGAAAACAATGTTTATG+AGG | 0.441271 | 5_3:-37949766 | Msa0810030:intron |
| TTTATCCAATCTCTGTTCAC+TGG | 0.444972 | 5_3:+37951738 | None:intergenic |
| CAAGGCTATTGCAGCAATTG+AGG | 0.447046 | 5_3:-37950425 | Msa0810030:CDS |
| TGCTGAGAGAATTCAGCATT+TGG | 0.450518 | 5_3:-37951329 | Msa0810030:CDS |
| TAGCATGAAGCACATCATAC+TGG | 0.450947 | 5_3:+37951482 | None:intergenic |
| AACAAATCACCGATATTTGA+AGG | 0.451394 | 5_3:+37946263 | None:intergenic |
| TTCTTCAACAACTTCGGCAC+CGG | 0.456331 | 5_3:+37947290 | None:intergenic |
| GAGAATTTGAACTCAAAGTT+GGG | 0.456651 | 5_3:-37951814 | Msa0810030:CDS |
| CAGAAAATAAACAATCTTGA+AGG | 0.457143 | 5_3:-37951655 | Msa0810030:CDS |
| TACTAAGCTTAAGAAATCTC+TGG | 0.457644 | 5_3:-37954315 | Msa0810030:CDS |
| CTCACCTTTCTATGATGCTT+AGG | 0.460786 | 5_3:+37947230 | None:intergenic |
| ATCTTCAGATTCCGTTTCAT+CGG | 0.462299 | 5_3:-37954667 | Msa0810030:CDS |
| TTACCTTAACAACAGTTCTA+GGG | 0.473223 | 5_3:+37946852 | None:intergenic |
| ACTGTGCTACAGTGGACTCT+TGG | 0.475742 | 5_3:+37951374 | None:intergenic |
| GAAGAACAATTACAAAGAAA+AGG | 0.477258 | 5_3:-37947075 | Msa0810030:CDS |
| AACGTAAAACCAGGAAAAGC+AGG | 0.477327 | 5_3:-37947260 | Msa0810030:CDS |
| TAGAAATCAATACGATCAAA+TGG | 0.477543 | 5_3:-37950735 | Msa0810030:CDS |
| GAATAGGGATCATCTGCATA+TGG | 0.477666 | 5_3:+37946221 | None:intergenic |
| TCCTTGAAGCTAGATTCTAC+AGG | 0.477856 | 5_3:-37953925 | Msa0810030:CDS |
| GAAATTTGCTGCTGAAGAAA+GGG | 0.478421 | 5_3:-37953758 | Msa0810030:CDS |
| AATATCTCAGAGAAATGATC+AGG | 0.479619 | 5_3:-37950672 | Msa0810030:intron |
| GGAAATTGATACTCTGCAAA+AGG | 0.483387 | 5_3:-37951022 | Msa0810030:CDS |
| TGAAGCTTTAATCTCAAAGA+AGG | 0.488627 | 5_3:-37951296 | Msa0810030:CDS |
| TCTTCAGATTCCGTTTCATC+GGG | 0.489312 | 5_3:-37954666 | Msa0810030:CDS |
| CGCGAAACTTCCCGATGAAA+CGG | 0.489834 | 5_3:+37954656 | None:intergenic |
| TCCACTTTCTTCAACAACTT+CGG | 0.490669 | 5_3:+37947284 | None:intergenic |
| TGTTATAGCTGAAAAGGATA+AGG | 0.495700 | 5_3:-37954019 | Msa0810030:intron |
| GAATCTATCGAGGCTCTTCG+AGG | 0.498143 | 5_3:+37954755 | None:intergenic |
| AAAGGAGAGGATGAAAATAG+AGG | 0.498263 | 5_3:-37951004 | Msa0810030:CDS |
| TGCAAATGTTATAGAAGAGA+AGG | 0.500758 | 5_3:-37953704 | Msa0810030:CDS |
| AGAAAGTGTCTCTTTCGTGC+TGG | 0.501908 | 5_3:+37951521 | None:intergenic |
| TAAAGAACAGGAAAAGAAGC+TGG | 0.508708 | 5_3:-37950902 | Msa0810030:CDS |
| CTATCGAGGCTCTTCGAGGT+TGG | 0.511880 | 5_3:+37954759 | None:intergenic |
| AGGCTTTGCTGCAGTTGCAA+TGG | 0.513603 | 5_3:-37949565 | Msa0810030:CDS |
| CCGTTTCATCGATTAAAAGA+AGG | 0.516324 | 5_3:-37947469 | Msa0810030:CDS |
| AGAAAATATGGAAAGAATGC+AGG | 0.520425 | 5_3:-37951067 | Msa0810030:CDS |
| GCCGAAGTTGTTGAAGAAAG+TGG | 0.523660 | 5_3:-37947285 | Msa0810030:CDS |
| AAGGCTATTGCAGCAATTGA+GGG | 0.526951 | 5_3:-37950424 | Msa0810030:CDS |
| AGTTTGAATGAACAGATGAA+TGG | 0.529976 | 5_3:-37953952 | Msa0810030:CDS |
| CAGAGTGCAAAGAAGAATCA+AGG | 0.533124 | 5_3:-37950381 | Msa0810030:CDS |
| TGAAGGATCACTTCAGGAGA+TGG | 0.533658 | 5_3:-37951638 | Msa0810030:CDS |
| TGAGTGTAGGAAGCTAGAAG+AGG | 0.536020 | 5_3:-37949696 | Msa0810030:CDS |
| GCTGATCTTGCTGAAAAGCT+TGG | 0.538124 | 5_3:-37951688 | Msa0810030:CDS |
| TGCAGCAGGAACATGATAAG+AGG | 0.539558 | 5_3:-37949960 | Msa0810030:CDS |
| GTTAGGAAGTGTTAGATCAT+CGG | 0.542953 | 5_3:-37951224 | Msa0810030:CDS |
| TACCGAGACTCTTCAACAGT+TGG | 0.544911 | 5_3:-37954150 | Msa0810030:CDS |
| TCAGGAGGAACACGCTAAGC+TGG | 0.546991 | 5_3:-37950341 | Msa0810030:intron |
| GATAGATTCAAATCGTTGTA+CGG | 0.547193 | 5_3:-37954741 | Msa0810030:CDS |
| AATGGTAGAGAATAAGCAGC+TGG | 0.548203 | 5_3:-37950717 | Msa0810030:CDS |
| AACAAGTACTGTCTTGTTCG+AGG | 0.548694 | 5_3:-37947050 | Msa0810030:CDS |
| AGCCAACTGTTGAAGAGTCT+CGG | 0.551677 | 5_3:+37954148 | None:intergenic |
| TCAGGTTACTCATATGCAGC+AGG | 0.557529 | 5_3:-37949974 | Msa0810030:intron |
| CGATATTTGAAGGACGAGGA+TGG | 0.558900 | 5_3:+37946273 | None:intergenic |
| GAGACTCTTCAACAGTTGGC+TGG | 0.560169 | 5_3:-37954146 | Msa0810030:CDS |
| CTGTGAAGAAATAGAAGCAC+CGG | 0.568173 | 5_3:-37947309 | Msa0810030:CDS |
| ATTAGTGAAAGAGCAAGCTT+CGG | 0.570880 | 5_3:-37954500 | Msa0810030:CDS |
| CGATGATGATAACGGTTTCG+CGG | 0.572240 | 5_3:+37954704 | None:intergenic |
| TTCATTGATGCAGAGTCAGA+GGG | 0.572866 | 5_3:-37946303 | Msa0810030:intron |
| CATTCCTAAGCATCATAGAA+AGG | 0.573980 | 5_3:-37947234 | Msa0810030:intron |
| TTTCATCAAACTTGTTAACA+AGG | 0.574635 | 5_3:+37951578 | None:intergenic |
| CCTTGAAGCTAGATTCTACA+GGG | 0.574717 | 5_3:-37953924 | Msa0810030:CDS |
| GATGAGTGACAAGCCAAAAG+AGG | 0.578542 | 5_3:-37949537 | Msa0810030:CDS |
| TTTCATTGATGCAGAGTCAG+AGG | 0.580175 | 5_3:-37946304 | Msa0810030:intron |
| TAGATCATCGGAGAACCAAA+TGG | 0.581804 | 5_3:-37951212 | Msa0810030:intron |
| GCAATCGCAATGCAGAAGCT+AGG | 0.583781 | 5_3:-37954789 | None:intergenic |
| GCTCAAAATTTCAGCTCTAG+AGG | 0.586627 | 5_3:-37951100 | Msa0810030:CDS |
| GAAGATGAGAAATTATGGAA+AGG | 0.591854 | 5_3:-37954218 | Msa0810030:CDS |
| GAAAACAGATCTTGATATTG+CGG | 0.595808 | 5_3:-37954476 | Msa0810030:intron |
| GTGAACTTGAAGATGAGTGT+AGG | 0.599411 | 5_3:-37949709 | Msa0810030:CDS |
| GCAAATGTTATAGAAGAGAA+GGG | 0.608131 | 5_3:-37953703 | Msa0810030:intron |
| GCAGAGATCGATGATGATAA+CGG | 0.608733 | 5_3:+37954696 | None:intergenic |
| GCGAATCTGAAGCTAACCGC+AGG | 0.609242 | 5_3:-37954636 | Msa0810030:intron |
| TACCTTAACAACAGTTCTAG+GGG | 0.611278 | 5_3:+37946853 | None:intergenic |
| AAGCTCAGATTAAAGCATTG+AGG | 0.620114 | 5_3:-37949733 | Msa0810030:CDS |
| CTCTGTATACTGTGCTACAG+TGG | 0.623363 | 5_3:+37951366 | None:intergenic |
| TTGATACTCTGCAAAAGGAG+AGG | 0.623737 | 5_3:-37951017 | Msa0810030:CDS |
| TTGGCTGGTATCGTTCAAGA+TGG | 0.632425 | 5_3:-37954131 | Msa0810030:intron |
| AGACATATTGAAGAAATCAG+AGG | 0.633777 | 5_3:-37951043 | Msa0810030:CDS |
| TCACCGATATTTGAAGGACG+AGG | 0.642715 | 5_3:+37946269 | None:intergenic |
| CTATTGCAGCAATTGAGGGA+AGG | 0.643200 | 5_3:-37950420 | Msa0810030:CDS |
| GCAGTTGATGCACATTCAGG+AGG | 0.646273 | 5_3:-37950356 | Msa0810030:CDS |
| ATCGCAATGCAGAAGCTAGG+AGG | 0.647783 | 5_3:-37954786 | None:intergenic |
| ACGCGAAGCTTAAGGTGAAG+CGG | 0.656351 | 5_3:-37954244 | Msa0810030:CDS |
| GAAGCTTAAGGTGAAGCGGA+AGG | 0.659706 | 5_3:-37954240 | Msa0810030:CDS |
| TAAGCTTAAGAAATCTCTGG+AGG | 0.662299 | 5_3:-37954312 | Msa0810030:CDS |
| CTAAGACGTTTCGAAGCTGT+AGG | 0.663100 | 5_3:+37950953 | None:intergenic |
| AGCTGAAAATGAACTGAGAG+AGG | 0.664957 | 5_3:-37949884 | Msa0810030:intron |
| AAAGTGGAGAACGTAAAACC+AGG | 0.676173 | 5_3:-37947269 | Msa0810030:CDS |
| ACAACGATTTGAATCTATCG+AGG | 0.692543 | 5_3:+37954745 | None:intergenic |
| GTAAAACCAGGAAAAGCAGG+AGG | 0.707258 | 5_3:-37947257 | Msa0810030:CDS |
| GCTGGAAGATCAGATCACAG+AGG | 0.771101 | 5_3:-37950884 | Msa0810030:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGAATTGTTAAAATAAATA+GGG | + | chr5_3:37950777-37950796 | None:intergenic | 10.0% |
| !! | TTTGAATTGTTAAAATAAAT+AGG | + | chr5_3:37950778-37950797 | None:intergenic | 10.0% |
| !!! | ATTATAATTTTATCATGTTT+TGG | - | chr5_3:37952945-37952964 | Msa0810030:intron | 10.0% |
| !! | CTTTCTTGTATAAAAATTTA+AGG | - | chr5_3:37947662-37947681 | Msa0810030:intron | 15.0% |
| !!! | AAAAATTTAAGGTTTCATTA+TGG | - | chr5_3:37947673-37947692 | Msa0810030:intron | 15.0% |
| !! | TTGATTAATGATTCAAATTA+CGG | + | chr5_3:37947899-37947918 | None:intergenic | 15.0% |
| !! | TCAATATAAATAGAGTTATA+TGG | + | chr5_3:37948587-37948606 | None:intergenic | 15.0% |
| !!! | TACTAATTTTTATTGTCTTA+TGG | - | chr5_3:37949082-37949101 | Msa0810030:intron | 15.0% |
| !! | TGAATTGTTAAAATAAATAG+GGG | + | chr5_3:37950776-37950795 | None:intergenic | 15.0% |
| !!! | TATTTTTTTGCAATATTTTC+AGG | - | chr5_3:37951391-37951410 | Msa0810030:CDS | 15.0% |
| !!! | TTTTGTATTATATTCAGATA+AGG | - | chr5_3:37951789-37951808 | Msa0810030:CDS | 15.0% |
| !!! | ATTTTGTATTATATTCACAT+AGG | - | chr5_3:37951915-37951934 | Msa0810030:intron | 15.0% |
| !!! | TTTTGTATTATATTCACATA+GGG | - | chr5_3:37951916-37951935 | Msa0810030:intron | 15.0% |
| !! | TATTAGAATTATGAATTAAC+TGG | - | chr5_3:37952014-37952033 | Msa0810030:intron | 15.0% |
| !! | ATTAGAATTATGAATTAACT+GGG | - | chr5_3:37952015-37952034 | Msa0810030:intron | 15.0% |
| !!! | TTGATAATGATAATAGATAT+TGG | - | chr5_3:37952514-37952533 | Msa0810030:intron | 15.0% |
| !!! | TGATATAATTTCAAGTATTT+AGG | - | chr5_3:37952761-37952780 | Msa0810030:intron | 15.0% |
| !!! | TGTTTTATCTTAATTATGTA+TGG | - | chr5_3:37953018-37953037 | Msa0810030:intron | 15.0% |
| !!! | TATTTTTTTTGTTTTAAGAG+AGG | - | chr5_3:37953141-37953160 | Msa0810030:intron | 15.0% |
| !!! | ATTTTTTTTGTTTTAAGAGA+GGG | - | chr5_3:37953142-37953161 | Msa0810030:intron | 15.0% |
| !! | AATGATCAGAAAAAATATTA+TGG | + | chr5_3:37953283-37953302 | None:intergenic | 15.0% |
| !!! | TATAAAATGACAAATGTTTT+AGG | - | chr5_3:37953793-37953812 | Msa0810030:intron | 15.0% |
| !! | AAGTAACTCAATATATATAA+GGG | + | chr5_3:37954459-37954478 | None:intergenic | 15.0% |
| !!! | TTTTGAAATGTATGAAACTT+AGG | - | chr5_3:37946596-37946615 | Msa0810030:intron | 20.0% |
| !!! | TTTGAAATGTATGAAACTTA+GGG | - | chr5_3:37946597-37946616 | Msa0810030:intron | 20.0% |
| !!! | TCCTTTTTTCGTATTTAATT+AGG | - | chr5_3:37946926-37946945 | Msa0810030:intron | 20.0% |
| !! | ACCTAATTAAATACGAAAAA+AGG | + | chr5_3:37946930-37946949 | None:intergenic | 20.0% |
| !! | TATATTGTTATCCTTATTAC+AGG | - | chr5_3:37947189-37947208 | Msa0810030:intron | 20.0% |
| !! | TTTGAAGAAATAATATGCAA+TGG | - | chr5_3:37947336-37947355 | Msa0810030:intron | 20.0% |
| !!! | GAATGTTTTATATCAAGAAT+AGG | - | chr5_3:37947362-37947381 | Msa0810030:intron | 20.0% |
| !! | AAAAAAAATACTTCTCTAAC+AGG | + | chr5_3:37947827-37947846 | None:intergenic | 20.0% |
| !!! | TATTTTTACCTTGAATAAGT+AGG | + | chr5_3:37947852-37947871 | None:intergenic | 20.0% |
| !! | TGATTAATGATTCAAATTAC+GGG | + | chr5_3:37947898-37947917 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTTTTGAATGGC+AGG | + | chr5_3:37948716-37948735 | None:intergenic | 20.0% |
| !! | TGATTTGATGTAATATAATG+TGG | + | chr5_3:37948964-37948983 | None:intergenic | 20.0% |
| !!! | CATCTTTGACTTTTATTTTA+AGG | + | chr5_3:37949212-37949231 | None:intergenic | 20.0% |
| !! | ATATAAAAATAACGAACACA+AGG | + | chr5_3:37949846-37949865 | None:intergenic | 20.0% |
| !!! | ATTGACTTCTTACAATATTT+TGG | - | chr5_3:37950703-37950722 | Msa0810030:CDS | 20.0% |
| !!! | AGTTTGTAAATTACTCTTTT+TGG | - | chr5_3:37950863-37950882 | Msa0810030:intron | 20.0% |
| !!! | GTTTGTAAATTACTCTTTTT+GGG | - | chr5_3:37950864-37950883 | Msa0810030:intron | 20.0% |
| !!! | TTTGTAAATTACTCTTTTTG+GGG | - | chr5_3:37950865-37950884 | Msa0810030:intron | 20.0% |
| !!! | TCAACGTTAGTTTAATTTAT+TGG | - | chr5_3:37951844-37951863 | Msa0810030:CDS | 20.0% |
| !!! | AAGAAAATTGAAGCAATTTT+AGG | + | chr5_3:37952185-37952204 | None:intergenic | 20.0% |
| !! | AAGATAATTAACAACCATAA+AGG | - | chr5_3:37952683-37952702 | Msa0810030:intron | 20.0% |
| !!! | TCACTTTTAAAGATGAATTA+TGG | - | chr5_3:37953197-37953216 | Msa0810030:intron | 20.0% |
| !! | GTTTATTAAAAGATCAAAGA+AGG | - | chr5_3:37953219-37953238 | Msa0810030:intron | 20.0% |
| !!! | TTTTAATTACTCATCCTTAA+TGG | + | chr5_3:37953315-37953334 | None:intergenic | 20.0% |
| !! | GAGTAATTAAAAGATCTAAT+TGG | - | chr5_3:37953323-37953342 | Msa0810030:intron | 20.0% |
| !! | ATATAAATATCACGACAATA+TGG | - | chr5_3:37953375-37953394 | Msa0810030:intron | 20.0% |
| !! | TATAAATATCACGACAATAT+GGG | - | chr5_3:37953376-37953395 | Msa0810030:intron | 20.0% |
| !!! | CAGAAAAATTCAATATTTTC+AGG | + | chr5_3:37954070-37954089 | None:intergenic | 20.0% |
| !!! | ATTGAATTTTTCTGATTATC+AGG | - | chr5_3:37954076-37954095 | Msa0810030:intron | 20.0% |
| !!! | GTATTTATCTTTTGTTTTCT+TGG | + | chr5_3:37954104-37954123 | None:intergenic | 20.0% |
| !! | ATATATAAGGGTAAACTAAT+TGG | + | chr5_3:37954447-37954466 | None:intergenic | 20.0% |
| !! | GAAGTAACTCAATATATATA+AGG | + | chr5_3:37954460-37954479 | None:intergenic | 20.0% |
| !! | GATTAGTATTATATCTGATT+TGG | + | chr5_3:37954581-37954600 | None:intergenic | 20.0% |
| ! | TCAATAGAAGCAGAAAAAAA+CGG | + | chr5_3:37946407-37946426 | None:intergenic | 25.0% |
| !!! | TGTTTTGTTGTTGTAATGAA+CGG | - | chr5_3:37946623-37946642 | Msa0810030:intron | 25.0% |
| ! | AAAGGAACAAAAAGCAAAAT+AGG | + | chr5_3:37946912-37946931 | None:intergenic | 25.0% |
| ! | TGAAAAGGATAAGGAAAAAT+TGG | - | chr5_3:37946981-37947000 | Msa0810030:intron | 25.0% |
| !! | AGTTGATATGAAAAGTTGAT+TGG | - | chr5_3:37947141-37947160 | Msa0810030:intron | 25.0% |
| ! | TAAGTAGTTTCATGTTAGAA+AGG | - | chr5_3:37947502-37947521 | Msa0810030:intron | 25.0% |
| ! | ATTAACACTACTTTATGCAT+TGG | + | chr5_3:37947756-37947775 | None:intergenic | 25.0% |
| !!! | TTTTTTGTCCTACTTATTCA+AGG | - | chr5_3:37947841-37947860 | Msa0810030:intron | 25.0% |
| !! | TTATTTCTTAGTGAGGTTTA+AGG | - | chr5_3:37948461-37948480 | Msa0810030:intron | 25.0% |
| ! | ACAAAATGACAAGAATTGTT+TGG | + | chr5_3:37948531-37948550 | None:intergenic | 25.0% |
| ! | ATGCAACATAGTATTAAGTT+AGG | + | chr5_3:37948692-37948711 | None:intergenic | 25.0% |
| ! | GAACATTTACTATGTTCTTA+AGG | + | chr5_3:37948898-37948917 | None:intergenic | 25.0% |
| ! | ATGAAGTTATAAGGATTTGA+GGG | + | chr5_3:37949032-37949051 | None:intergenic | 25.0% |
| ! | TTCACTATGATGAAGTTATA+AGG | + | chr5_3:37949041-37949060 | None:intergenic | 25.0% |
| ! | GTCTTCTAAATTCTTTATCA+TGG | + | chr5_3:37949130-37949149 | None:intergenic | 25.0% |
| ! | CAGAAAATAAACAATCTTGA+AGG | - | chr5_3:37949336-37949355 | Msa0810030:intron | 25.0% |
| !!! | TTTCATCAAACTTGTTAACA+AGG | + | chr5_3:37949416-37949435 | None:intergenic | 25.0% |
| ! | TGATTAACGATAATACCATT+TGG | + | chr5_3:37949797-37949816 | None:intergenic | 25.0% |
| ! | TAGAAATCAATACGATCAAA+TGG | - | chr5_3:37950256-37950275 | Msa0810030:intron | 25.0% |
| ! | TATAACTGGTTACCTATAAT+AGG | - | chr5_3:37950349-37950368 | Msa0810030:CDS | 25.0% |
| ! | AGGCTATTAATGACATTAAA+AGG | - | chr5_3:37950417-37950436 | Msa0810030:CDS | 25.0% |
| ! | GTATACATATTATATAGCTC+AGG | + | chr5_3:37951164-37951183 | None:intergenic | 25.0% |
| ! | TGAGGAGATTAATTTATCAT+AGG | + | chr5_3:37951354-37951373 | None:intergenic | 25.0% |
| ! | ATAAAAAATCACAGTTTGTG+AGG | + | chr5_3:37951372-37951391 | None:intergenic | 25.0% |
| ! | CTAACATGCAAATAAACTAA+CGG | + | chr5_3:37951538-37951557 | None:intergenic | 25.0% |
| !! | ATTAATTTGAATCATCGAGT+TGG | + | chr5_3:37951643-37951662 | None:intergenic | 25.0% |
| !! | ACTAAACAATTTTCATACTG+TGG | - | chr5_3:37951681-37951700 | Msa0810030:CDS | 25.0% |
| ! | CAATCGTTTACCTTTATATT+AGG | + | chr5_3:37952041-37952060 | None:intergenic | 25.0% |
| ! | CTAATATAAAGGTAAACGAT+TGG | - | chr5_3:37952039-37952058 | Msa0810030:intron | 25.0% |
| ! | TTACTTGCTTGGAATAATAA+TGG | - | chr5_3:37952239-37952258 | Msa0810030:intron | 25.0% |
| ! | ATGATTATCTTGTCACATAT+AGG | - | chr5_3:37952297-37952316 | Msa0810030:intron | 25.0% |
| !! | TTGACGATTTTGCATATAAA+AGG | - | chr5_3:37952430-37952449 | Msa0810030:intron | 25.0% |
| !! | TGACGATTTTGCATATAAAA+GGG | - | chr5_3:37952431-37952450 | Msa0810030:intron | 25.0% |
| ! | TCTACTATCAATTACCTTTA+TGG | + | chr5_3:37952700-37952719 | None:intergenic | 25.0% |
| !!! | TCTAATTGGTCTTCATTAAT+AGG | - | chr5_3:37953337-37953356 | Msa0810030:intron | 25.0% |
| ! | AAAAATGCACAAATTCAACT+TGG | + | chr5_3:37953426-37953445 | None:intergenic | 25.0% |
| ! | CAAATTCATTCAACATTCAT+TGG | + | chr5_3:37953460-37953479 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTGTTCATGTGAC+AGG | - | chr5_3:37953493-37953512 | Msa0810030:intron | 25.0% |
| !! | ATTAAAAGAAGGAGTTCTTT+TGG | - | chr5_3:37953533-37953552 | Msa0810030:intron | 25.0% |
| !!! | AAATGTTTTAGGCCTTTTAA+TGG | - | chr5_3:37953804-37953823 | Msa0810030:intron | 25.0% |
| ! | AATTCTCAACTTCATATTCA+TGG | + | chr5_3:37953890-37953909 | None:intergenic | 25.0% |
| ! | TATGAAGTTGAGAATTCTAA+TGG | - | chr5_3:37953894-37953913 | Msa0810030:intron | 25.0% |
| ! | GAAGAACAATTACAAAGAAA+AGG | - | chr5_3:37953916-37953935 | Msa0810030:CDS | 25.0% |
| ! | TAATTCATGTGTACATCTAT+AGG | + | chr5_3:37953999-37954018 | None:intergenic | 25.0% |
| ! | TAAATGACATGCCAATAAAA+AGG | + | chr5_3:37954184-37954203 | None:intergenic | 25.0% |
| !! | TGCTTTTACTTATACTATGT+CGG | + | chr5_3:37954494-37954513 | None:intergenic | 25.0% |
| !! | TCCTTTTTCCTATAAAACTT+GGG | - | chr5_3:37954550-37954569 | Msa0810030:intron | 25.0% |
| ! | AAATATAACTACAGCACAAT+AGG | + | chr5_3:37954661-37954680 | None:intergenic | 25.0% |
| GATAGATTCAAATCGTTGTA+CGG | - | chr5_3:37946250-37946269 | Msa0810030:CDS | 30.0% | |
| GAAAACAGATCTTGATATTG+CGG | - | chr5_3:37946515-37946534 | Msa0810030:intron | 30.0% | |
| TACTAAGCTTAAGAAATCTC+TGG | - | chr5_3:37946676-37946695 | Msa0810030:intron | 30.0% | |
| GAAGATGAGAAATTATGGAA+AGG | - | chr5_3:37946773-37946792 | Msa0810030:intron | 30.0% | |
| TGTTATAGCTGAAAAGGATA+AGG | - | chr5_3:37946972-37946991 | Msa0810030:intron | 30.0% | |
| AGTTTGAATGAACAGATGAA+TGG | - | chr5_3:37947039-37947058 | Msa0810030:CDS | 30.0% | |
| !! | ATGAAAAGTTGATTGGTTTG+AGG | - | chr5_3:37947148-37947167 | Msa0810030:intron | 30.0% |
| TGCAAATGTTATAGAAGAGA+AGG | - | chr5_3:37947287-37947306 | Msa0810030:CDS | 30.0% | |
| GCAAATGTTATAGAAGAGAA+GGG | - | chr5_3:37947288-37947307 | Msa0810030:CDS | 30.0% | |
| GATGATATAGTGAAACATGA+AGG | - | chr5_3:37947395-37947414 | Msa0810030:intron | 30.0% | |
| ! | TGAAGGATGTCTAAAAGTTT+TGG | - | chr5_3:37947412-37947431 | Msa0810030:intron | 30.0% |
| TGTGTTTGGCTAATGAATTT+AGG | - | chr5_3:37947465-37947484 | Msa0810030:CDS | 30.0% | |
| ! | TAGAAAGGTCATTGATCTTT+TGG | - | chr5_3:37947517-37947536 | Msa0810030:intron | 30.0% |
| GTGTTAATCATATCTTTGTC+TGG | - | chr5_3:37947768-37947787 | Msa0810030:intron | 30.0% | |
| AACTCACATAAATGTCTTCA+GGG | + | chr5_3:37947802-37947821 | None:intergenic | 30.0% | |
| CTACTTCAAACACACTAAAT+AGG | - | chr5_3:37948001-37948020 | Msa0810030:intron | 30.0% | |
| TCATCTTTAACTAATGCTTC+TGG | - | chr5_3:37948063-37948082 | Msa0810030:intron | 30.0% | |
| TCAATTCAAAACCAGACTAT+CGG | + | chr5_3:37948148-37948167 | None:intergenic | 30.0% | |
| !!! | AGTCTGGTTTTGAATTGAAT+TGG | - | chr5_3:37948150-37948169 | Msa0810030:intron | 30.0% |
| ! | AACCATTTTAAACCTTTTCC+AGG | - | chr5_3:37948369-37948388 | Msa0810030:intron | 30.0% |
| !! | GCATCATAACATGTTTTTGA+AGG | - | chr5_3:37948391-37948410 | Msa0810030:intron | 30.0% |
| ACGAAAATGTAGCATGAATT+TGG | - | chr5_3:37948414-37948433 | Msa0810030:intron | 30.0% | |
| ! | CTTTTACATGTCAGTTCTTA+AGG | + | chr5_3:37948755-37948774 | None:intergenic | 30.0% |
| ACTACTCTTTGATGTTTACT+TGG | - | chr5_3:37948778-37948797 | Msa0810030:intron | 30.0% | |
| CTTTGATGTTTACTTGGAAA+AGG | - | chr5_3:37948784-37948803 | Msa0810030:intron | 30.0% | |
| !! | GTATCTCTCTAGAACATATA+AGG | + | chr5_3:37948862-37948881 | None:intergenic | 30.0% |
| GATGAAGTTATAAGGATTTG+AGG | + | chr5_3:37949033-37949052 | None:intergenic | 30.0% | |
| CATGTTAACTTCTAGTAGAT+TGG | - | chr5_3:37949149-37949168 | Msa0810030:intron | 30.0% | |
| AGAGAATTTGAACTCAAAGT+TGG | - | chr5_3:37949176-37949195 | Msa0810030:intron | 30.0% | |
| GAGAATTTGAACTCAAAGTT+GGG | - | chr5_3:37949177-37949196 | Msa0810030:intron | 30.0% | |
| ! | TGAAGCTTTAATCTCAAAGA+AGG | - | chr5_3:37949695-37949714 | Msa0810030:CDS | 30.0% |
| AGTCACAATTTCCAAATTAG+AGG | - | chr5_3:37949728-37949747 | Msa0810030:CDS | 30.0% | |
| ATATTTAATGCTTTGCAGCA+AGG | - | chr5_3:37949862-37949881 | Msa0810030:intron | 30.0% | |
| AGAAAATATGGAAAGAATGC+AGG | - | chr5_3:37949924-37949943 | Msa0810030:CDS | 30.0% | |
| AGACATATTGAAGAAATCAG+AGG | - | chr5_3:37949948-37949967 | Msa0810030:CDS | 30.0% | |
| AGGCATGCAAAAAACTTAAA+TGG | + | chr5_3:37950186-37950205 | None:intergenic | 30.0% | |
| AATATCTCAGAGAAATGATC+AGG | - | chr5_3:37950319-37950338 | Msa0810030:intron | 30.0% | |
| GAAGTATGAATTAGAGAAGA+TGG | - | chr5_3:37950439-37950458 | Msa0810030:intron | 30.0% | |
| TGTCAAATTGGAAAAAGACA+AGG | - | chr5_3:37950466-37950485 | Msa0810030:intron | 30.0% | |
| ATTGGTCAAAAATGTTTCAG+TGG | + | chr5_3:37950529-37950548 | None:intergenic | 30.0% | |
| GTAATTTGATCGAAGTGAAT+TGG | - | chr5_3:37950840-37950859 | Msa0810030:intron | 30.0% | |
| ! | TTGTTTTCTACGTGTAATCA+AGG | + | chr5_3:37951217-37951236 | None:intergenic | 30.0% |
| CGTAGAAAACAATGTTTATG+AGG | - | chr5_3:37951225-37951244 | Msa0810030:CDS | 30.0% | |
| TATTCCATACTTTGGATTTC+TGG | + | chr5_3:37951331-37951350 | None:intergenic | 30.0% | |
| ATCATAGGTATTCCATACTT+TGG | + | chr5_3:37951339-37951358 | None:intergenic | 30.0% | |
| !! | TGCAATATTTTCAGGAAGAA+AGG | - | chr5_3:37951399-37951418 | Msa0810030:CDS | 30.0% |
| !! | CCTGTTTTGAATTAACTTCT+GGG | + | chr5_3:37951481-37951500 | None:intergenic | 30.0% |
| !! | ACCTGTTTTGAATTAACTTC+TGG | + | chr5_3:37951482-37951501 | None:intergenic | 30.0% |
| GAAGTTAATTCAAAACAGGT+TGG | - | chr5_3:37951482-37951501 | Msa0810030:CDS | 30.0% | |
| ! | CGTTAGTTTATTTGCATGTT+AGG | - | chr5_3:37951536-37951555 | Msa0810030:CDS | 30.0% |
| ! | TTGGCTTCAGTGATATTTTT+GGG | + | chr5_3:37951624-37951643 | None:intergenic | 30.0% |
| CAGTGATTAAATGATTGCAT+AGG | - | chr5_3:37951752-37951771 | Msa0810030:CDS | 30.0% | |
| ATTAACTGGGCCTAATATAA+AGG | - | chr5_3:37952028-37952047 | Msa0810030:intron | 30.0% | |
| CAATGTACACATTAATGACT+TGG | + | chr5_3:37952065-37952084 | None:intergenic | 30.0% | |
| CAAGTCATTAATGTGTACAT+TGG | - | chr5_3:37952063-37952082 | Msa0810030:intron | 30.0% | |
| TGTCACATATAGGCATAATA+TGG | - | chr5_3:37952307-37952326 | Msa0810030:intron | 30.0% | |
| TAGCATGCTATTAGATTAGA+TGG | - | chr5_3:37952367-37952386 | Msa0810030:intron | 30.0% | |
| !! | TTTTGCATATAAAAGGGTGT+AGG | - | chr5_3:37952437-37952456 | Msa0810030:intron | 30.0% |
| GCATATCAGTTGTTATCTAA+TGG | - | chr5_3:37952553-37952572 | Msa0810030:intron | 30.0% | |
| !! | AGGCTTTGTTTAGTACAATT+AGG | - | chr5_3:37952658-37952677 | Msa0810030:intron | 30.0% |
| TATACTATACCATTACATGC+AGG | + | chr5_3:37953259-37953278 | None:intergenic | 30.0% | |
| TCATTAAAAGCTCTCCATTA+AGG | - | chr5_3:37953298-37953317 | Msa0810030:intron | 30.0% | |
| ! | TTCTTTTAATCGATGAAACG+GGG | + | chr5_3:37953523-37953542 | None:intergenic | 30.0% |
| ! | CTTCTTTTAATCGATGAAAC+GGG | + | chr5_3:37953524-37953543 | None:intergenic | 30.0% |
| ! | CCTTCTTTTAATCGATGAAA+CGG | + | chr5_3:37953525-37953544 | None:intergenic | 30.0% |
| ATGACTTGAATGTATTAAGG+AGG | + | chr5_3:37953617-37953636 | None:intergenic | 30.0% | |
| GAGATGACTTGAATGTATTA+AGG | + | chr5_3:37953620-37953639 | None:intergenic | 30.0% | |
| GATTTCAGACAACCATTAAA+AGG | + | chr5_3:37953819-37953838 | None:intergenic | 30.0% | |
| TTACCTTAACAACAGTTCTA+GGG | + | chr5_3:37954142-37954161 | None:intergenic | 30.0% | |
| ATTACCTTAACAACAGTTCT+AGG | + | chr5_3:37954143-37954162 | None:intergenic | 30.0% | |
| !! | TGTGCATCTTGATTTGTTAA+AGG | + | chr5_3:37954228-37954247 | None:intergenic | 30.0% |
| ! | CTCCTTTTTCCTATAAAACT+TGG | - | chr5_3:37954549-37954568 | Msa0810030:intron | 30.0% |
| !! | TCCCAAGTTTTATAGGAAAA+AGG | + | chr5_3:37954554-37954573 | None:intergenic | 30.0% |
| !! | TGGTTTATCCCAAGTTTTAT+AGG | + | chr5_3:37954561-37954580 | None:intergenic | 30.0% |
| CTTTGTACATACCTTGTATA+AGG | - | chr5_3:37954600-37954619 | Msa0810030:intron | 30.0% | |
| CTTATTTGTCACCTTATACA+AGG | + | chr5_3:37954614-37954633 | None:intergenic | 30.0% | |
| AACAAATCACCGATATTTGA+AGG | + | chr5_3:37954731-37954750 | None:intergenic | 30.0% | |
| ACAACGATTTGAATCTATCG+AGG | + | chr5_3:37946249-37946268 | None:intergenic | 35.0% | |
| ATCTTCAGATTCCGTTTCAT+CGG | - | chr5_3:37946324-37946343 | Msa0810030:intron | 35.0% | |
| GAAATCAGAATCAAAACCTG+CGG | + | chr5_3:37946374-37946393 | None:intergenic | 35.0% | |
| CTGCTTCTATTGATCGTAAT+CGG | - | chr5_3:37946414-37946433 | Msa0810030:intron | 35.0% | |
| ATTAGTGAAAGAGCAAGCTT+CGG | - | chr5_3:37946491-37946510 | Msa0810030:intron | 35.0% | |
| TAAGCTTAAGAAATCTCTGG+AGG | - | chr5_3:37946679-37946698 | Msa0810030:intron | 35.0% | |
| GGAAGGAAGATGAGAAATTA+TGG | - | chr5_3:37946768-37946787 | Msa0810030:intron | 35.0% | |
| GGTAAGTATGAAGATTCACT+CGG | - | chr5_3:37946881-37946900 | Msa0810030:CDS | 35.0% | |
| GCTCATTATCACCTGTAATA+AGG | + | chr5_3:37947203-37947222 | None:intergenic | 35.0% | |
| !! | TGAAATTTGCTGCTGAAGAA+AGG | - | chr5_3:37947232-37947251 | Msa0810030:intron | 35.0% |
| !! | GAAATTTGCTGCTGAAGAAA+GGG | - | chr5_3:37947233-37947252 | Msa0810030:intron | 35.0% |
| !! | TCTAAAAGTTTTGGTCCAGT+AGG | - | chr5_3:37947421-37947440 | Msa0810030:intron | 35.0% |
| TACAGAACTTATGAACCTAC+TGG | + | chr5_3:37947439-37947458 | None:intergenic | 35.0% | |
| AAAACTGAATGTAAGACCCT+GGG | + | chr5_3:37947546-37947565 | None:intergenic | 35.0% | |
| TAAAACTGAATGTAAGACCC+TGG | + | chr5_3:37947547-37947566 | None:intergenic | 35.0% | |
| ! | CTTTTGTGAGTCTGATTTAG+TGG | - | chr5_3:37947629-37947648 | Msa0810030:intron | 35.0% |
| GTTTCATTATGGAACTCTAG+TGG | - | chr5_3:37947684-37947703 | Msa0810030:intron | 35.0% | |
| CAACTCACATAAATGTCTTC+AGG | + | chr5_3:37947803-37947822 | None:intergenic | 35.0% | |
| CTGAAGACATTTATGTGAGT+TGG | - | chr5_3:37947801-37947820 | Msa0810030:intron | 35.0% | |
| ! | AGCTTTGATAGCAACTTGAA+AGG | + | chr5_3:37947942-37947961 | None:intergenic | 35.0% |
| AGATGACTTTCAAACTACGT+CGG | + | chr5_3:37948049-37948068 | None:intergenic | 35.0% | |
| TTTAACTAATGCTTCTGGTG+AGG | - | chr5_3:37948068-37948087 | Msa0810030:intron | 35.0% | |
| TTAACTAATGCTTCTGGTGA+GGG | - | chr5_3:37948069-37948088 | Msa0810030:intron | 35.0% | |
| TAATTCTAACATCCCTATGG+TGG | + | chr5_3:37948125-37948144 | None:intergenic | 35.0% | |
| TGTTAGAATTACCGATAGTC+TGG | - | chr5_3:37948134-37948153 | Msa0810030:intron | 35.0% | |
| ATTCGATACCATATTCTCGA+TGG | + | chr5_3:37948190-37948209 | None:intergenic | 35.0% | |
| TCAGACATCTTAAATGTGCT+AGG | - | chr5_3:37948305-37948324 | Msa0810030:intron | 35.0% | |
| ATCTTAAATGTGCTAGGCTA+TGG | - | chr5_3:37948311-37948330 | Msa0810030:intron | 35.0% | |
| TGCCTGGAAAAGGTTTAAAA+TGG | + | chr5_3:37948374-37948393 | None:intergenic | 35.0% | |
| CAAAAACATGTTATGATGCC+TGG | + | chr5_3:37948390-37948409 | None:intergenic | 35.0% | |
| ! | CGTCTTCTTATTTCTTAGTG+AGG | - | chr5_3:37948454-37948473 | Msa0810030:intron | 35.0% |
| AATGTTCAAGATGTCTCACA+TGG | - | chr5_3:37948911-37948930 | Msa0810030:intron | 35.0% | |
| TTTATCCAATCTCTGTTCAC+TGG | + | chr5_3:37949256-37949275 | None:intergenic | 35.0% | |
| CTATACTTCTTGCTTCAACT+TGG | - | chr5_3:37949446-37949465 | Msa0810030:intron | 35.0% | |
| TTCAGCTTTCTCCTCTAATT+TGG | + | chr5_3:37949742-37949761 | None:intergenic | 35.0% | |
| GAGAAAGCTGAAATTCTGTT+AGG | - | chr5_3:37949750-37949769 | Msa0810030:CDS | 35.0% | |
| !! | GTTAGGAAGTGTTAGATCAT+CGG | - | chr5_3:37949767-37949786 | Msa0810030:intron | 35.0% |
| GGCTGAAAGCAAAGAAAATA+TGG | - | chr5_3:37949912-37949931 | Msa0810030:CDS | 35.0% | |
| GGAAATTGATACTCTGCAAA+AGG | - | chr5_3:37949969-37949988 | Msa0810030:CDS | 35.0% | |
| AAAGGAGAGGATGAAAATAG+AGG | - | chr5_3:37949987-37950006 | Msa0810030:intron | 35.0% | |
| ! | CATTTTGCAGCATAAAGAAC+AGG | - | chr5_3:37950077-37950096 | Msa0810030:intron | 35.0% |
| TAAAGAACAGGAAAAGAAGC+TGG | - | chr5_3:37950089-37950108 | Msa0810030:intron | 35.0% | |
| ! | AATAATGACCGATTCTGCAA+AGG | + | chr5_3:37950206-37950225 | None:intergenic | 35.0% |
| GTACATCAAGCACCTATTAT+AGG | + | chr5_3:37950364-37950383 | None:intergenic | 35.0% | |
| CTCATAACATGCATTTGAAC+AGG | - | chr5_3:37950397-37950416 | Msa0810030:CDS | 35.0% | |
| GAAGATGGAGATTGTCAAAT+TGG | - | chr5_3:37950454-37950473 | Msa0810030:intron | 35.0% | |
| !! | TTTGACCAATTTTAACCACC+AGG | - | chr5_3:37950539-37950558 | Msa0810030:CDS | 35.0% |
| !! | GTAAATTACTCTTTTTGGGG+TGG | - | chr5_3:37950868-37950887 | Msa0810030:intron | 35.0% |
| AATTAAGCTTACCTGGTGTT+TGG | + | chr5_3:37950985-37951004 | None:intergenic | 35.0% | |
| TTAATTCCTGTCCAATCTTC+AGG | - | chr5_3:37950999-37951018 | Msa0810030:CDS | 35.0% | |
| CATATGAGTAACCTGAAGAT+TGG | + | chr5_3:37951013-37951032 | None:intergenic | 35.0% | |
| ATGCTTTAATCTGAGCTTCA+TGG | + | chr5_3:37951256-37951275 | None:intergenic | 35.0% | |
| !! | AAGCTCAGATTAAAGCATTG+AGG | - | chr5_3:37951258-37951277 | Msa0810030:CDS | 35.0% |
| ATCTCCAGAAATCCAAAGTA+TGG | - | chr5_3:37951324-37951343 | Msa0810030:CDS | 35.0% | |
| !! | TTTTCAGGAAGAAAGGCAAA+AGG | - | chr5_3:37951406-37951425 | Msa0810030:CDS | 35.0% |
| CCCAGAAGTTAATTCAAAAC+AGG | - | chr5_3:37951478-37951497 | Msa0810030:CDS | 35.0% | |
| !! | GTTGGCTTCAGTGATATTTT+TGG | + | chr5_3:37951625-37951644 | None:intergenic | 35.0% |
| CAGATTATTACCAAAGACAG+TGG | + | chr5_3:37951818-37951837 | None:intergenic | 35.0% | |
| TCCAATGTAAAACCTTGAGA+GGG | + | chr5_3:37952477-37952496 | None:intergenic | 35.0% | |
| TAGTAGTTTCCTGCATGTAA+TGG | - | chr5_3:37953247-37953266 | Msa0810030:intron | 35.0% | |
| ! | CCGTTTCATCGATTAAAAGA+AGG | - | chr5_3:37953522-37953541 | Msa0810030:intron | 35.0% |
| ! | AAAAGAAGGAGTTCTTTTGG+TGG | - | chr5_3:37953536-37953555 | Msa0810030:intron | 35.0% |
| ! | GCTTCTATTTCTTCACAGTA+AGG | + | chr5_3:37953680-37953699 | None:intergenic | 35.0% |
| TCCACTTTCTTCAACAACTT+CGG | + | chr5_3:37953710-37953729 | None:intergenic | 35.0% | |
| CATTCCTAAGCATCATAGAA+AGG | - | chr5_3:37953757-37953776 | Msa0810030:CDS | 35.0% | |
| !!! | GTTCTAGGGGTATTTGTTTT+TGG | + | chr5_3:37954128-37954147 | None:intergenic | 35.0% |
| ! | TACCTTAACAACAGTTCTAG+GGG | + | chr5_3:37954141-37954160 | None:intergenic | 35.0% |
| ! | GCTGAAACTCTCCTTTTTAT+TGG | - | chr5_3:37954170-37954189 | Msa0810030:CDS | 35.0% |
| TGCACAACTCTTAACGAATA+TGG | - | chr5_3:37954242-37954261 | Msa0810030:CDS | 35.0% | |
| ! | TTTTCATTACCACACTATGC+TGG | - | chr5_3:37954317-37954336 | Msa0810030:CDS | 35.0% |
| !!! | ATCGGTGATTTGTTTTCAGA+AGG | - | chr5_3:37954737-37954756 | Msa0810030:CDS | 35.0% |
| !!! | TCGGTGATTTGTTTTCAGAA+GGG | - | chr5_3:37954738-37954757 | Msa0810030:CDS | 35.0% |
| GCAGAGATCGATGATGATAA+CGG | + | chr5_3:37946298-37946317 | None:intergenic | 40.0% | |
| TCTTCAGATTCCGTTTCATC+GGG | - | chr5_3:37946325-37946344 | Msa0810030:intron | 40.0% | |
| TAACGAAAACGCGAAGCTTA+AGG | - | chr5_3:37946739-37946758 | Msa0810030:intron | 40.0% | |
| ! | GCGTCTTGTTATAGCTGAAA+AGG | - | chr5_3:37946966-37946985 | Msa0810030:intron | 40.0% |
| TCCTTGAAGCTAGATTCTAC+AGG | - | chr5_3:37947066-37947085 | Msa0810030:CDS | 40.0% | |
| CCTTGAAGCTAGATTCTACA+GGG | - | chr5_3:37947067-37947086 | Msa0810030:CDS | 40.0% | |
| GTTCTGTATGTGTGTGTGTT+TGG | - | chr5_3:37947451-37947470 | Msa0810030:CDS | 40.0% | |
| ! | ATTGATCTTTTGGTCACCCA+GGG | - | chr5_3:37947527-37947546 | Msa0810030:intron | 40.0% |
| TGTGAGTCTGATTTAGTGGT+AGG | - | chr5_3:37947633-37947652 | Msa0810030:intron | 40.0% | |
| GTGAGTCTGATTTAGTGGTA+GGG | - | chr5_3:37947634-37947653 | Msa0810030:intron | 40.0% | |
| TATGGAACTCTAGTGGAAGT+TGG | - | chr5_3:37947691-37947710 | Msa0810030:intron | 40.0% | |
| TGCTATCAAAGCTCTTGATC+TGG | - | chr5_3:37947949-37947968 | Msa0810030:intron | 40.0% | |
| GCTATCAAAGCTCTTGATCT+GGG | - | chr5_3:37947950-37947969 | Msa0810030:intron | 40.0% | |
| GTACTGAACCAAGCAATCAA+TGG | - | chr5_3:37948091-37948110 | Msa0810030:intron | 40.0% | |
| CGGTAATTCTAACATCCCTA+TGG | + | chr5_3:37948128-37948147 | None:intergenic | 40.0% | |
| GAATTGAATTGGCGCATTTG+TGG | - | chr5_3:37948161-37948180 | Msa0810030:intron | 40.0% | |
| TTGATGAGCAGAAAGGTCAT+TGG | + | chr5_3:37948217-37948236 | None:intergenic | 40.0% | |
| ! | TTGGTTGTTGATGAGCAGAA+AGG | + | chr5_3:37948224-37948243 | None:intergenic | 40.0% |
| !! | TAAGGAGTTCTAGATGGCTT+TGG | + | chr5_3:37948243-37948262 | None:intergenic | 40.0% |
| ! | AGCCATCTAGAACTCCTTAT+TGG | - | chr5_3:37948244-37948263 | Msa0810030:intron | 40.0% |
| !! | CACCAATAAGGAGTTCTAGA+TGG | + | chr5_3:37948249-37948268 | None:intergenic | 40.0% |
| ! | CATCTAGAACTCCTTATTGG+TGG | - | chr5_3:37948247-37948266 | Msa0810030:intron | 40.0% |
| CAAAGTACAGACCACCAATA+AGG | + | chr5_3:37948261-37948280 | None:intergenic | 40.0% | |
| ! | TTGGTGGTCTGTACTTTGAT+CGG | - | chr5_3:37948263-37948282 | Msa0810030:intron | 40.0% |
| TGTACTTTGATCGGGTAACT+AGG | - | chr5_3:37948272-37948291 | Msa0810030:intron | 40.0% | |
| CATGTTATGATGCCTGGAAA+AGG | + | chr5_3:37948384-37948403 | None:intergenic | 40.0% | |
| AAGATGTCTCACATGGTAGT+AGG | - | chr5_3:37948918-37948937 | Msa0810030:intron | 40.0% | |
| CATAACCAGTGAACAGAGAT+TGG | - | chr5_3:37949248-37949267 | Msa0810030:intron | 40.0% | |
| CAATCTTGAAGGATCACTTC+AGG | - | chr5_3:37949347-37949366 | Msa0810030:intron | 40.0% | |
| TAGCATGAAGCACATCATAC+TGG | + | chr5_3:37949512-37949531 | None:intergenic | 40.0% | |
| TGTGCTTCATGCTAAGTTCT+TGG | - | chr5_3:37949518-37949537 | Msa0810030:CDS | 40.0% | |
| TGCTGAGAGAATTCAGCATT+TGG | - | chr5_3:37949662-37949681 | Msa0810030:intron | 40.0% | |
| TAGATCATCGGAGAACCAAA+TGG | - | chr5_3:37949779-37949798 | Msa0810030:intron | 40.0% | |
| ! | GCTCAAAATTTCAGCTCTAG+AGG | - | chr5_3:37949891-37949910 | Msa0810030:CDS | 40.0% |
| TTGATACTCTGCAAAAGGAG+AGG | - | chr5_3:37949974-37949993 | Msa0810030:intron | 40.0% | |
| ATGGTATACAAACACCAGTC+AGG | + | chr5_3:37950167-37950186 | None:intergenic | 40.0% | |
| TTTGCATGCCTTTGCAGAAT+CGG | - | chr5_3:37950195-37950214 | Msa0810030:intron | 40.0% | |
| AATGGTAGAGAATAAGCAGC+TGG | - | chr5_3:37950274-37950293 | Msa0810030:intron | 40.0% | |
| ! | GATCAGGTGTTGCATATAAC+TGG | - | chr5_3:37950335-37950354 | Msa0810030:intron | 40.0% |
| AAGGCTATTGCAGCAATTGA+GGG | - | chr5_3:37950567-37950586 | Msa0810030:CDS | 40.0% | |
| ! | CTTTGCACTCTGCAAGTTTT+TGG | + | chr5_3:37950602-37950621 | None:intergenic | 40.0% |
| CAGAGTGCAAAGAAGAATCA+AGG | - | chr5_3:37950610-37950629 | Msa0810030:intron | 40.0% | |
| TTGAGAAACATCCAAACACC+AGG | - | chr5_3:37950971-37950990 | Msa0810030:CDS | 40.0% | |
| AGCTGAAAATGAACTGAGAG+AGG | - | chr5_3:37951107-37951126 | Msa0810030:CDS | 40.0% | |
| GTGAACTTGAAGATGAGTGT+AGG | - | chr5_3:37951282-37951301 | Msa0810030:CDS | 40.0% | |
| ! | TTAACTTCTGGGTCCTCTTT+TGG | + | chr5_3:37951470-37951489 | None:intergenic | 40.0% |
| AATGATCTGTCTGACTCAAC+AGG | - | chr5_3:37951956-37951975 | Msa0810030:intron | 40.0% | |
| ! | ATGTGTACATTGGCTATACC+TGG | - | chr5_3:37952073-37952092 | Msa0810030:intron | 40.0% |
| TCTACCAAAAGATTCCGCAT+TGG | + | chr5_3:37952099-37952118 | None:intergenic | 40.0% | |
| ! | TCTTTTGGTAGACAAGGTTC+CGG | - | chr5_3:37952107-37952126 | Msa0810030:intron | 40.0% |
| ! | TCCCTCTCAAGGTTTTACAT+TGG | - | chr5_3:37952473-37952492 | Msa0810030:intron | 40.0% |
| CTCCAATGTAAAACCTTGAG+AGG | + | chr5_3:37952478-37952497 | None:intergenic | 40.0% | |
| AGTAGTAGAATTCGCTACGT+AGG | - | chr5_3:37952638-37952657 | Msa0810030:intron | 40.0% | |
| ! | GCTTTTTATCTCCTCTCCAT+AGG | - | chr5_3:37953649-37953668 | Msa0810030:intron | 40.0% |
| TCACAGTAAGGAGATTCCTA+TGG | + | chr5_3:37953668-37953687 | None:intergenic | 40.0% | |
| ! | CTGTGAAGAAATAGAAGCAC+CGG | - | chr5_3:37953682-37953701 | Msa0810030:intron | 40.0% |
| AAAGTGGAGAACGTAAAACC+AGG | - | chr5_3:37953722-37953741 | Msa0810030:CDS | 40.0% | |
| AACGTAAAACCAGGAAAAGC+AGG | - | chr5_3:37953731-37953750 | Msa0810030:CDS | 40.0% | |
| CTCACCTTTCTATGATGCTT+AGG | + | chr5_3:37953764-37953783 | None:intergenic | 40.0% | |
| CTCATTGAGTATAGGAGCAA+AGG | + | chr5_3:37953856-37953875 | None:intergenic | 40.0% | |
| GTTACCTGCTCATTGAGTAT+AGG | + | chr5_3:37953864-37953883 | None:intergenic | 40.0% | |
| ! | AACAAGTACTGTCTTGTTCG+AGG | - | chr5_3:37953941-37953960 | Msa0810030:CDS | 40.0% |
| CATTTCCACACCACATTTCT+TGG | - | chr5_3:37954019-37954038 | Msa0810030:intron | 40.0% | |
| GCAAATAAGAAGTCTGCACT+TGG | + | chr5_3:37954048-37954067 | None:intergenic | 40.0% | |
| TACCCCTAGAACTGTTGTTA+AGG | - | chr5_3:37954136-37954155 | Msa0810030:CDS | 40.0% | |
| !! | GGTGCTACTAAAAATGACGA+TGG | - | chr5_3:37954338-37954357 | Msa0810030:intron | 40.0% |
| TTTCATTGATGCAGAGTCAG+AGG | - | chr5_3:37954687-37954706 | Msa0810030:CDS | 40.0% | |
| TTCATTGATGCAGAGTCAGA+GGG | - | chr5_3:37954688-37954707 | Msa0810030:CDS | 40.0% | |
| CATCCTCGTCCTTCAAATAT+CGG | - | chr5_3:37954719-37954738 | Msa0810030:CDS | 40.0% | |
| GAATAGGGATCATCTGCATA+TGG | + | chr5_3:37954773-37954792 | None:intergenic | 40.0% | |
| TCGTTGTACGGTTCAGTTTC+CGG | - | chr5_3:37946262-37946281 | Msa0810030:CDS | 45.0% | |
| !! | CGATGATGATAACGGTTTCG+CGG | + | chr5_3:37946290-37946309 | None:intergenic | 45.0% |
| TACCGAGACTCTTCAACAGT+TGG | - | chr5_3:37946841-37946860 | Msa0810030:intron | 45.0% | |
| AGCCAACTGTTGAAGAGTCT+CGG | + | chr5_3:37946846-37946865 | None:intergenic | 45.0% | |
| TTGGCTGGTATCGTTCAAGA+TGG | - | chr5_3:37946860-37946879 | Msa0810030:CDS | 45.0% | |
| ! | CCCTGTAGAATCTAGCTTCA+AGG | + | chr5_3:37947070-37947089 | None:intergenic | 45.0% |
| ! | CATTGATCTTTTGGTCACCC+AGG | - | chr5_3:37947526-37947545 | Msa0810030:intron | 45.0% |
| ! | TCTAACATCCCTATGGTGGA+GGG | + | chr5_3:37948121-37948140 | None:intergenic | 45.0% |
| TTCTAACATCCCTATGGTGG+AGG | + | chr5_3:37948122-37948141 | None:intergenic | 45.0% | |
| TGTGGAGACCATCGAGAATA+TGG | - | chr5_3:37948179-37948198 | Msa0810030:intron | 45.0% | |
| TGGTGGTCTGTACTTTGATC+GGG | - | chr5_3:37948264-37948283 | Msa0810030:intron | 45.0% | |
| CTTTGATCGGGTAACTAGGT+AGG | - | chr5_3:37948276-37948295 | Msa0810030:intron | 45.0% | |
| TATGGTCTGACTCATACAGC+TGG | - | chr5_3:37948329-37948348 | Msa0810030:intron | 45.0% | |
| !! | TGCTGTGAAAGTGTGGCTTT+TGG | + | chr5_3:37948498-37948517 | None:intergenic | 45.0% |
| ACACTTTCACAGCATGACCT+GGG | - | chr5_3:37948504-37948523 | Msa0810030:intron | 45.0% | |
| GACAAGAATTGTTTGGACCC+AGG | + | chr5_3:37948524-37948543 | None:intergenic | 45.0% | |
| GCTGATCTTGCTGAAAAGCT+TGG | - | chr5_3:37949303-37949322 | Msa0810030:intron | 45.0% | |
| TGAAGGATCACTTCAGGAGA+TGG | - | chr5_3:37949353-37949372 | Msa0810030:intron | 45.0% | |
| !! | AGAAAGTGTCTCTTTCGTGC+TGG | + | chr5_3:37949473-37949492 | None:intergenic | 45.0% |
| CTCTGTATACTGTGCTACAG+TGG | + | chr5_3:37949628-37949647 | None:intergenic | 45.0% | |
| CTAAGACGTTTCGAAGCTGT+AGG | + | chr5_3:37950041-37950060 | None:intergenic | 45.0% | |
| ACAGCTTCGAAACGTCTTAG+AGG | - | chr5_3:37950041-37950060 | Msa0810030:intron | 45.0% | |
| GTCAGCCTGGTGGTTAAAAT+TGG | + | chr5_3:37950547-37950566 | None:intergenic | 45.0% | |
| ! | TTTTAACCACCAGGCTGACA+AGG | - | chr5_3:37950548-37950567 | Msa0810030:CDS | 45.0% |
| CAAGGCTATTGCAGCAATTG+AGG | - | chr5_3:37950566-37950585 | Msa0810030:CDS | 45.0% | |
| CTATTGCAGCAATTGAGGGA+AGG | - | chr5_3:37950571-37950590 | Msa0810030:CDS | 45.0% | |
| ! | GAAGCAGTTGATGCACATTC+AGG | - | chr5_3:37950632-37950651 | Msa0810030:intron | 45.0% |
| GGACAGGAATTAAGCTTACC+TGG | + | chr5_3:37950992-37951011 | None:intergenic | 45.0% | |
| GAGTAACCTGAAGATTGGAC+AGG | + | chr5_3:37951008-37951027 | None:intergenic | 45.0% | |
| TCAGGTTACTCATATGCAGC+AGG | - | chr5_3:37951017-37951036 | Msa0810030:CDS | 45.0% | |
| TGCAGCAGGAACATGATAAG+AGG | - | chr5_3:37951031-37951050 | Msa0810030:CDS | 45.0% | |
| TTTCACTGTGTTCAGCTTGC+AGG | + | chr5_3:37951065-37951084 | None:intergenic | 45.0% | |
| TGAGTGTAGGAAGCTAGAAG+AGG | - | chr5_3:37951295-37951314 | Msa0810030:CDS | 45.0% | |
| GATGAGTGACAAGCCAAAAG+AGG | - | chr5_3:37951454-37951473 | Msa0810030:CDS | 45.0% | |
| ! | CTAGTGATTGCTGACTGCAT+TGG | - | chr5_3:37951879-37951898 | Msa0810030:intron | 45.0% |
| !! | AACAGGCTCTAGGGAATAGT+AGG | - | chr5_3:37951973-37951992 | Msa0810030:intron | 45.0% |
| !! | ACAGGCTCTAGGGAATAGTA+GGG | - | chr5_3:37951974-37951993 | Msa0810030:intron | 45.0% |
| ! | GCGGAATCTTTTGGTAGACA+AGG | - | chr5_3:37952101-37952120 | Msa0810030:intron | 45.0% |
| CCTAACCTTGTCGTCATTTC+CGG | + | chr5_3:37952129-37952148 | None:intergenic | 45.0% | |
| CGGAAATGACGACAAGGTTA+GGG | - | chr5_3:37952127-37952146 | Msa0810030:intron | 45.0% | |
| CAGCTGTGAACTTACTTGCT+TGG | - | chr5_3:37952228-37952247 | Msa0810030:intron | 45.0% | |
| AACAACAGAGTTCCCTCTCA+AGG | - | chr5_3:37952462-37952481 | Msa0810030:intron | 45.0% | |
| !! | GGAGTTCTTTTGGTGGCAAA+AGG | - | chr5_3:37953543-37953562 | Msa0810030:intron | 45.0% |
| GTAAGGAGATTCCTATGGAG+AGG | + | chr5_3:37953663-37953682 | None:intergenic | 45.0% | |
| TTCTTCAACAACTTCGGCAC+CGG | + | chr5_3:37953704-37953723 | None:intergenic | 45.0% | |
| GCCGAAGTTGTTGAAGAAAG+TGG | - | chr5_3:37953706-37953725 | Msa0810030:CDS | 45.0% | |
| GTAAAACCAGGAAAAGCAGG+AGG | - | chr5_3:37953734-37953753 | Msa0810030:CDS | 45.0% | |
| TGCTCCTATACTCAATGAGC+AGG | - | chr5_3:37953857-37953876 | Msa0810030:intron | 45.0% | |
| CACTTGGAAGCCAAGAAATG+TGG | + | chr5_3:37954032-37954051 | None:intergenic | 45.0% | |
| TTAGTAGCACCAGCATAGTG+TGG | + | chr5_3:37954329-37954348 | None:intergenic | 45.0% | |
| CGATATTTGAAGGACGAGGA+TGG | + | chr5_3:37954721-37954740 | None:intergenic | 45.0% | |
| TCACCGATATTTGAAGGACG+AGG | + | chr5_3:37954725-37954744 | None:intergenic | 45.0% | |
| !!! | TTTTTTTTTTTTTTTTTGAA+TGG | + | chr5_3:37948720-37948739 | None:intergenic | 5.0% |
| !! | AATATTAATATAAAACTATT+TGG | - | chr5_3:37948983-37949002 | Msa0810030:intron | 5.0% |
| !!! | TTTTAAATATGTTTAAATTA+AGG | - | chr5_3:37951716-37951735 | Msa0810030:CDS | 5.0% |
| !! | TTTAAATATGTTTAAATTAA+GGG | - | chr5_3:37951717-37951736 | Msa0810030:CDS | 5.0% |
| GAATCTATCGAGGCTCTTCG+AGG | + | chr5_3:37946239-37946258 | None:intergenic | 50.0% | |
| !! | TGATAACGGTTTCGCGGTTC+CGG | + | chr5_3:37946284-37946303 | None:intergenic | 50.0% |
| CGCGAAACTTCCCGATGAAA+CGG | + | chr5_3:37946338-37946357 | None:intergenic | 50.0% | |
| ACGCGAAGCTTAAGGTGAAG+CGG | - | chr5_3:37946747-37946766 | Msa0810030:intron | 50.0% | |
| GAAGCTTAAGGTGAAGCGGA+AGG | - | chr5_3:37946751-37946770 | Msa0810030:intron | 50.0% | |
| GAGACTCTTCAACAGTTGGC+TGG | - | chr5_3:37946845-37946864 | Msa0810030:intron | 50.0% | |
| ! | TAACATCCCTATGGTGGAGG+GGG | + | chr5_3:37948119-37948138 | None:intergenic | 50.0% |
| ! | CTAACATCCCTATGGTGGAG+GGG | + | chr5_3:37948120-37948139 | None:intergenic | 50.0% |
| TCGGGTAACTAGGTAGGTCA+CGG | - | chr5_3:37948282-37948301 | Msa0810030:intron | 50.0% | |
| AGTGAGGTTTAAGGACGACC+TGG | - | chr5_3:37948470-37948489 | Msa0810030:intron | 50.0% | |
| GTGAGGTTTAAGGACGACCT+GGG | - | chr5_3:37948471-37948490 | Msa0810030:intron | 50.0% | |
| ! | AAAGTGTGGCTTTTGGTCCC+AGG | + | chr5_3:37948491-37948510 | None:intergenic | 50.0% |
| CAGGTCATGCTGTGAAAGTG+TGG | + | chr5_3:37948505-37948524 | None:intergenic | 50.0% | |
| CACACTTTCACAGCATGACC+TGG | - | chr5_3:37948503-37948522 | Msa0810030:intron | 50.0% | |
| ! | ACTGTGCTACAGTGGACTCT+TGG | + | chr5_3:37949620-37949639 | None:intergenic | 50.0% |
| GCTGGAAGATCAGATCACAG+AGG | - | chr5_3:37950107-37950126 | Msa0810030:intron | 50.0% | |
| GCATGCTGCAATTTCCTGAC+TGG | - | chr5_3:37950150-37950169 | Msa0810030:intron | 50.0% | |
| ! | GCAGTTGATGCACATTCAGG+AGG | - | chr5_3:37950635-37950654 | Msa0810030:intron | 50.0% |
| GTCTAGTCACAGCACACATG+TGG | + | chr5_3:37950901-37950920 | None:intergenic | 50.0% | |
| AGGCTTTGCTGCAGTTGCAA+TGG | - | chr5_3:37951426-37951445 | Msa0810030:CDS | 50.0% | |
| GATAAGGTCGCCACTGTCTT+TGG | - | chr5_3:37951805-37951824 | Msa0810030:CDS | 50.0% | |
| TGTCTGACTCAACAGGCTCT+AGG | - | chr5_3:37951963-37951982 | Msa0810030:intron | 50.0% | |
| GTCTGACTCAACAGGCTCTA+GGG | - | chr5_3:37951964-37951983 | Msa0810030:intron | 50.0% | |
| TTGGCTATACCTGGCCAATG+CGG | - | chr5_3:37952082-37952101 | Msa0810030:intron | 50.0% | |
| ! | CAAAAGATTCCGCATTGGCC+AGG | + | chr5_3:37952094-37952113 | None:intergenic | 50.0% |
| ! | CTGGCCAATGCGGAATCTTT+TGG | - | chr5_3:37952092-37952111 | Msa0810030:intron | 50.0% |
| AGGTTCCGGAAATGACGACA+AGG | - | chr5_3:37952121-37952140 | Msa0810030:intron | 50.0% | |
| CCGGAAATGACGACAAGGTT+AGG | - | chr5_3:37952126-37952145 | Msa0810030:intron | 50.0% | |
| GGAAGCCAAGAAATGTGGTG+TGG | + | chr5_3:37954027-37954046 | None:intergenic | 50.0% | |
| CTATCGAGGCTCTTCGAGGT+TGG | + | chr5_3:37946235-37946254 | None:intergenic | 55.0% | |
| ! | GCGAATCTGAAGCTAACCGC+AGG | - | chr5_3:37946355-37946374 | Msa0810030:intron | 55.0% |
| ! | AGGGGGAGCCATTGATTGCT+TGG | + | chr5_3:37948102-37948121 | None:intergenic | 55.0% |
| !! | CAATAGCCTTGTCAGCCTGG+TGG | + | chr5_3:37950557-37950576 | None:intergenic | 55.0% |
| !! | CTGCAATAGCCTTGTCAGCC+TGG | + | chr5_3:37950560-37950579 | None:intergenic | 55.0% |
| TCAGGAGGAACACGCTAAGC+TGG | - | chr5_3:37950650-37950669 | Msa0810030:intron | 55.0% | |
| GGAGACAGACACAGAGAGAC+TGG | + | chr5_3:37951517-37951536 | None:intergenic | 55.0% | |
| CATAGGGTCGCTACTGTCTG+CGG | - | chr5_3:37951932-37951951 | Msa0810030:intron | 55.0% | |
| !! | GGAATGCCTCCTGCTTTTCC+TGG | + | chr5_3:37953743-37953762 | None:intergenic | 55.0% |
| AATGGCTCCCCCTCCACCAT+AGG | - | chr5_3:37948109-37948128 | Msa0810030:intron | 60.0% | |
| ATGGCTCCCCCTCCACCATA+GGG | - | chr5_3:37948110-37948129 | Msa0810030:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 37946211 | 37954802 | 37946211 | ID=Msa0810030;Name=Msa0810030 |
| chr5_3 | mRNA | 37946211 | 37954802 | 37946211 | ID=Msa0810030-mRNA-1;Parent=Msa0810030;Name=Msa0810030-mRNA-1;_AED=0.10;_eAED=0.11;_QI=0|0.41|0.16|1|1|1|18|0|883 |
| chr5_3 | exon | 37954637 | 37954802 | 37954637 | ID=Msa0810030-mRNA-1:exon:11620;Parent=Msa0810030-mRNA-1 |
| chr5_3 | exon | 37954477 | 37954526 | 37954477 | ID=Msa0810030-mRNA-1:exon:11619;Parent=Msa0810030-mRNA-1 |
| chr5_3 | exon | 37954132 | 37954339 | 37954132 | ID=Msa0810030-mRNA-1:exon:11618;Parent=Msa0810030-mRNA-1 |
| chr5_3 | exon | 37953908 | 37954033 | 37953908 | ID=Msa0810030-mRNA-1:exon:11617;Parent=Msa0810030-mRNA-1 |
| chr5_3 | exon | 37953704 | 37953802 | 37953704 | ID=Msa0810030-mRNA-1:exon:11616;Parent=Msa0810030-mRNA-1 |
| chr5_3 | exon | 37951213 | 37951889 | 37951213 | ID=Msa0810030-mRNA-1:exon:11615;Parent=Msa0810030-mRNA-1 |
| chr5_3 | exon | 37950885 | 37951133 | 37950885 | ID=Msa0810030-mRNA-1:exon:11614;Parent=Msa0810030-mRNA-1 |
| chr5_3 | exon | 37950673 | 37950801 | 37950673 | ID=Msa0810030-mRNA-1:exon:11613;Parent=Msa0810030-mRNA-1 |
| chr5_3 | exon | 37950526 | 37950594 | 37950526 | ID=Msa0810030-mRNA-1:exon:11612;Parent=Msa0810030-mRNA-1 |
| chr5_3 | exon | 37950342 | 37950452 | 37950342 | ID=Msa0810030-mRNA-1:exon:11611;Parent=Msa0810030-mRNA-1 |
| chr5_3 | exon | 37949885 | 37949992 | 37949885 | ID=Msa0810030-mRNA-1:exon:11610;Parent=Msa0810030-mRNA-1 |
| chr5_3 | exon | 37949673 | 37949783 | 37949673 | ID=Msa0810030-mRNA-1:exon:11609;Parent=Msa0810030-mRNA-1 |
| chr5_3 | exon | 37949514 | 37949600 | 37949514 | ID=Msa0810030-mRNA-1:exon:11608;Parent=Msa0810030-mRNA-1 |
| chr5_3 | exon | 37947433 | 37947498 | 37947433 | ID=Msa0810030-mRNA-1:exon:11607;Parent=Msa0810030-mRNA-1 |
| chr5_3 | exon | 37947235 | 37947342 | 37947235 | ID=Msa0810030-mRNA-1:exon:11606;Parent=Msa0810030-mRNA-1 |
| chr5_3 | exon | 37947009 | 37947134 | 37947009 | ID=Msa0810030-mRNA-1:exon:11605;Parent=Msa0810030-mRNA-1 |
| chr5_3 | exon | 37946856 | 37946915 | 37946856 | ID=Msa0810030-mRNA-1:exon:11604;Parent=Msa0810030-mRNA-1 |
| chr5_3 | exon | 37946211 | 37946312 | 37946211 | ID=Msa0810030-mRNA-1:exon:11603;Parent=Msa0810030-mRNA-1 |
| chr5_3 | CDS | 37954637 | 37954802 | 37954637 | ID=Msa0810030-mRNA-1:cds;Parent=Msa0810030-mRNA-1 |
| chr5_3 | CDS | 37954477 | 37954526 | 37954477 | ID=Msa0810030-mRNA-1:cds;Parent=Msa0810030-mRNA-1 |
| chr5_3 | CDS | 37954132 | 37954339 | 37954132 | ID=Msa0810030-mRNA-1:cds;Parent=Msa0810030-mRNA-1 |
| chr5_3 | CDS | 37953908 | 37954033 | 37953908 | ID=Msa0810030-mRNA-1:cds;Parent=Msa0810030-mRNA-1 |
| chr5_3 | CDS | 37953704 | 37953802 | 37953704 | ID=Msa0810030-mRNA-1:cds;Parent=Msa0810030-mRNA-1 |
| chr5_3 | CDS | 37951213 | 37951889 | 37951213 | ID=Msa0810030-mRNA-1:cds;Parent=Msa0810030-mRNA-1 |
| chr5_3 | CDS | 37950885 | 37951133 | 37950885 | ID=Msa0810030-mRNA-1:cds;Parent=Msa0810030-mRNA-1 |
| chr5_3 | CDS | 37950673 | 37950801 | 37950673 | ID=Msa0810030-mRNA-1:cds;Parent=Msa0810030-mRNA-1 |
| chr5_3 | CDS | 37950526 | 37950594 | 37950526 | ID=Msa0810030-mRNA-1:cds;Parent=Msa0810030-mRNA-1 |
| chr5_3 | CDS | 37950342 | 37950452 | 37950342 | ID=Msa0810030-mRNA-1:cds;Parent=Msa0810030-mRNA-1 |
| chr5_3 | CDS | 37949885 | 37949992 | 37949885 | ID=Msa0810030-mRNA-1:cds;Parent=Msa0810030-mRNA-1 |
| chr5_3 | CDS | 37949673 | 37949783 | 37949673 | ID=Msa0810030-mRNA-1:cds;Parent=Msa0810030-mRNA-1 |
| chr5_3 | CDS | 37949514 | 37949600 | 37949514 | ID=Msa0810030-mRNA-1:cds;Parent=Msa0810030-mRNA-1 |
| chr5_3 | CDS | 37947433 | 37947498 | 37947433 | ID=Msa0810030-mRNA-1:cds;Parent=Msa0810030-mRNA-1 |
| chr5_3 | CDS | 37947235 | 37947342 | 37947235 | ID=Msa0810030-mRNA-1:cds;Parent=Msa0810030-mRNA-1 |
| chr5_3 | CDS | 37947009 | 37947134 | 37947009 | ID=Msa0810030-mRNA-1:cds;Parent=Msa0810030-mRNA-1 |
| chr5_3 | CDS | 37946856 | 37946915 | 37946856 | ID=Msa0810030-mRNA-1:cds;Parent=Msa0810030-mRNA-1 |
| chr5_3 | CDS | 37946211 | 37946312 | 37946211 | ID=Msa0810030-mRNA-1:cds;Parent=Msa0810030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
