AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0851460

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0851460 MtrunA17_Chr5g0427741 75.346 361 59 9 145 479 4 360 2.63e-168 478
Msa0851460 MtrunA17_Chr5g0427741 70.588 170 24 4 1 144 160 329 9.30e-64 211
Msa0851460 MtrunA17_Chr5g0427701 84.906 106 12 1 378 479 49 154 3.48e-60 194
Msa0851460 MtrunA17_Chr5g0427701 69.388 98 26 1 47 144 26 119 7.30e-35 127
Msa0851460 MtrunA17_Chr5g0427701 67.647 68 6 2 172 223 9 76 5.19e-18 81.3
Msa0851460 MtrunA17_Chr5g0426361 44.402 259 59 11 234 471 35 229 7.66e-44 154
Msa0851460 MtrunA17_Chr5g0426361 55.469 128 24 3 1 126 91 187 3.55e-31 120
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 148 sgRNAs with CRISPR-Local

Find 942 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGGCAGGTGAACTGGATTT+TGG 0.240772 5_4:-41714622 None:intergenic
GTGGCAGGTGAACTGGATTT+TGG 0.240772 5_4:-41725086 None:intergenic
AGTGACAGGTGAACTGGATT+TGG 0.272410 5_4:-41715287 None:intergenic
AGTGACAGGTGAACTGGATT+TGG 0.272410 5_4:-41725798 None:intergenic
CTCAACCTTTAGAGAACATT+TGG 0.286183 5_4:+41715248 Msa0851460:CDS
CTCAACCTTTAGAGAACATT+TGG 0.286183 5_4:+41725759 Msa0851460:CDS
AGAAAACGAGTCCATGTTAA+TGG 0.304882 5_4:+41724860 Msa0851460:CDS
GAGCAGGTGCTGGGAAATCT+AGG 0.351586 5_4:+41715008 Msa0851460:intron
AGGTTTGCTGCTATCTGAAA+TGG 0.359406 5_4:-41715131 None:intergenic
AGGTTTGCTGCTACATGAAA+TGG 0.369128 5_4:-41725738 None:intergenic
CTTGGAAAGCAGCTAGGGTT+CGG 0.369372 5_4:+41714365 Msa0851460:five_prime_UTR
CTTGGAAACCAGCTAGGGTT+CGG 0.369372 5_4:+41724828 Msa0851460:CDS
TTTGCTGCTACCTGCTGAAA+TGG 0.370763 5_4:-41725639 None:intergenic
AGGTTTGGTGGCAGGTGAAC+TGG 0.371066 5_4:-41714629 None:intergenic
AGGTTTGGTGGCAGGTGAAC+TGG 0.371066 5_4:-41725093 None:intergenic
GTGACAGGTGAACTGGATTT+GGG 0.371369 5_4:-41715286 None:intergenic
GTGACAGGTGAACTGGATTT+GGG 0.371369 5_4:-41725797 None:intergenic
GACTTCGAAAAGCTAGGGTT+GGG 0.372895 5_4:+41725300 Msa0851460:CDS
AAAATTAGATGAACTCATAT+TGG 0.377963 5_4:+41725907 Msa0851460:CDS
CTTGCTTATGCCAAGTGAAA+TGG 0.379670 5_4:-41725537 None:intergenic
ATTGTCATCGGATTCGGATT+CGG 0.388065 5_4:-41725936 None:intergenic
GGTTGTTGAGGTTTGGTGGC+AGG 0.395076 5_4:-41714637 None:intergenic
CATACCATTGTCATCGGATT+CGG 0.396832 5_4:-41725942 None:intergenic
ATCGATAAGTTGTTGAGGTT+TGG 0.399721 5_4:-41725108 None:intergenic
TTGGAAAGCAGCTAGGGTTC+GGG 0.406271 5_4:+41714366 Msa0851460:five_prime_UTR
TTGGAAACCAGCTAGGGTTC+GGG 0.406271 5_4:+41724829 Msa0851460:CDS
AGGTTCAGTGACAGGTGAAC+TGG 0.419885 5_4:-41715293 None:intergenic
AGGTTCAGTGACAGGTGAAC+TGG 0.419885 5_4:-41725804 None:intergenic
TTTGAGGTTGATGATGGAAC+AGG 0.420892 5_4:+41714589 Msa0851460:five_prime_UTR
TTTGAGGTTGATGAAGGAAC+AGG 0.420892 5_4:+41725053 Msa0851460:CDS
CGGAAAGTTGCCAGGGTTGA+AGG 0.422556 5_4:+41714511 Msa0851460:five_prime_UTR
CGGAAAGTTGCCAGGGTTGA+AGG 0.422556 5_4:+41724975 Msa0851460:CDS
CAACATCTCGGAAAGTTGCC+AGG 0.423381 5_4:+41714503 Msa0851460:five_prime_UTR
CAACATCTCGGAAAGTTGCC+AGG 0.423381 5_4:+41724967 Msa0851460:CDS
ATCGATAGGTTGTTGAGGTT+TGG 0.425658 5_4:-41714644 None:intergenic
AGTTGTTGAGGTTTGGTGGC+AGG 0.426644 5_4:-41725101 None:intergenic
GTTCCCCAACTAAAACGTTC+TGG 0.431150 5_4:-41725589 None:intergenic
TCAATCCAAATGTTCTCTAA+AGG 0.441547 5_4:-41715253 None:intergenic
TCAATCCAAATGTTCTCTAA+AGG 0.441547 5_4:-41725764 None:intergenic
CAAATGTTCTCTAAAGGTTG+AGG 0.450102 5_4:-41715247 None:intergenic
CAAATGTTCTCTAAAGGTTG+AGG 0.450102 5_4:-41725758 None:intergenic
ATTGTCATCGGATTCAGATT+CGG 0.454106 5_4:-41715425 None:intergenic
CAACTCCATCATCATCATCT+TGG 0.456199 5_4:+41714347 Msa0851460:five_prime_UTR
CAACTCCATCATCATCATCT+TGG 0.456199 5_4:+41724810 Msa0851460:CDS
TCAGAAAACTTCGAAGGTTG+AGG 0.457225 5_4:-41725662 None:intergenic
GCTTCATTTGAGGTTGATGA+TGG 0.458091 5_4:+41714583 Msa0851460:five_prime_UTR
TACGGACTCGGAATGCCATC+GGG 0.459727 5_4:-41725382 None:intergenic
AGTTCTTGATTAATTGTAGC+AGG 0.460051 5_4:+41714322 Msa0851460:five_prime_UTR
TCAGAAAACTTCAAAGGTTG+AGG 0.462330 5_4:-41715151 None:intergenic
GGAAGAGAACGCTTCATTTG+AGG 0.463437 5_4:+41714573 Msa0851460:five_prime_UTR
GGAAGAGAACGCTTCATTTG+AGG 0.463437 5_4:+41725037 Msa0851460:CDS
GTCTTAACCCGAACCCTAGC+TGG 0.465079 5_4:-41724836 None:intergenic
GAAAGTTACCTGGTGGAGAC+TGG 0.466701 5_4:-41725193 None:intergenic
GGTTGTTGAGGTTCAGTGAC+AGG 0.478915 5_4:-41715301 None:intergenic
GGTTGTTGAGGTTCAGTGAC+AGG 0.478915 5_4:-41725812 None:intergenic
TTTGAAATCGATTTGAGAGA+AGG 0.479999 5_4:-41725008 None:intergenic
GCTGGGAAATCTAGTGTTGA+AGG 0.485111 5_4:+41725491 Msa0851460:CDS
AACTTTCAAGCTTTGAGAGA+GGG 0.493403 5_4:+41715104 Msa0851460:CDS
GCTTCATTTGAGGTTGATGA+AGG 0.494266 5_4:+41725047 Msa0851460:CDS
CATCATCTTGGAAAGCAGCT+AGG 0.495066 5_4:+41714359 Msa0851460:five_prime_UTR
CATCATCTTGGAAACCAGCT+AGG 0.495066 5_4:+41724822 Msa0851460:CDS
TGCACATGACTATGCTGAGT+TGG 0.499317 5_4:+41726021 Msa0851460:CDS
CAATACCCTTGCTACGGACT+CGG 0.502499 5_4:-41725394 None:intergenic
ACTCGGAATGCCATCGGGGA+GGG 0.505153 5_4:-41725377 None:intergenic
TTTGAAATCAATTTGAGAGA+AGG 0.507541 5_4:-41714544 None:intergenic
TCAGAGCTTGACATGTTGTC+AGG 0.510798 5_4:-41725566 None:intergenic
GATAGGTTGTTGAGGTTTGG+TGG 0.513763 5_4:-41714641 None:intergenic
GATAAGTTGTTGAGGTTTGG+TGG 0.515783 5_4:-41725105 None:intergenic
AAAGAAGACTTCGAAAAGCT+AGG 0.517074 5_4:+41725294 Msa0851460:CDS
TCTTCCTCTTCCTTCAACCC+TGG 0.519455 5_4:-41714521 None:intergenic
TCTTCCTCTTCCTTCAACCC+TGG 0.519455 5_4:-41724985 None:intergenic
CAATACCTTTGCTACGGACT+CGG 0.527612 5_4:-41714876 None:intergenic
GGGAGGAAATCCATTTCAGC+AGG 0.529729 5_4:+41725629 Msa0851460:CDS
AAAATTACATGAACGCATGA+TGG 0.532452 5_4:+41715396 Msa0851460:CDS
AAGAAGACTTCGAAAAGCTA+GGG 0.534120 5_4:+41725295 Msa0851460:CDS
CTACGGACTCGGAATGCCAT+CGG 0.535727 5_4:-41725383 None:intergenic
TATTTATTGGAGCAGGTGCT+GGG 0.538205 5_4:+41725474 Msa0851460:intron
AGACTTCGAAAAGCTAGGGT+TGG 0.543457 5_4:+41725299 Msa0851460:CDS
TCTCAGAAATCCATTTCACT+TGG 0.548216 5_4:+41725527 Msa0851460:CDS
ATCATCTTGGAAAGCAGCTA+GGG 0.548541 5_4:+41714360 Msa0851460:five_prime_UTR
ACCAATCGCCACTCTCCACC+AGG 0.549217 5_4:+41714721 Msa0851460:five_prime_UTR
TGCTGGTCAGAAAACTTCAA+AGG 0.549886 5_4:-41715157 None:intergenic
CACCAGCTATAACGTTCTGC+TGG 0.550137 5_4:-41715174 None:intergenic
AGGTGAACTGGATTTGGGAG+AGG 0.552907 5_4:-41715281 None:intergenic
AGGTGAACTGGATTTGGGAG+AGG 0.552907 5_4:-41725792 None:intergenic
GAATAGGAATTGCAACATCT+CGG 0.558259 5_4:+41714491 Msa0851460:intron
GAATAGGAATTGCAACATCT+CGG 0.558259 5_4:+41724955 Msa0851460:intron
GTTGCCAGGGTTGAAGGAAG+AGG 0.559344 5_4:+41714517 Msa0851460:five_prime_UTR
GTTGCCAGGGTTGAAGGAAG+AGG 0.559344 5_4:+41724981 Msa0851460:CDS
GACCAGCAGAACGTTATAGC+TGG 0.560883 5_4:+41715172 Msa0851460:CDS
TCATCATTGAGAGGTTGTTG+AGG 0.561775 5_4:-41715313 None:intergenic
ACGTTATAGCTGGTGGTCAA+CGG 0.563514 5_4:+41715182 Msa0851460:CDS
ACGTTATAGCTGGTGGTCAA+CGG 0.563514 5_4:+41725693 Msa0851460:CDS
TGAAAACAATACCTTTGCTA+CGG 0.565366 5_4:-41714882 None:intergenic
TGAAAACAATACCCTTGCTA+CGG 0.565366 5_4:-41725400 None:intergenic
TCATCACTGAGAGGTTGTTG+AGG 0.566874 5_4:-41725824 None:intergenic
TGCTGATCAGAAAACTTCGA+AGG 0.569736 5_4:-41725668 None:intergenic
GAACTTTCAAGCTCAGAAAG+AGG 0.570873 5_4:+41725608 Msa0851460:CDS
GATCAGCAGAACGTTATAGC+TGG 0.571403 5_4:+41725683 Msa0851460:CDS
ACCAATCGCCAGTCTCCACC+AGG 0.572352 5_4:+41725185 Msa0851460:CDS
GAATTTGAAGCCCTCCCCGA+TGG 0.577459 5_4:+41725367 Msa0851460:CDS
CAAATTGATTTCAAACTCTG+AGG 0.581442 5_4:+41714552 Msa0851460:five_prime_UTR
GCACTGCATACCATTGTCAT+CGG 0.581531 5_4:-41715437 None:intergenic
GCACTGCATACCATTGTCAT+CGG 0.581531 5_4:-41725948 None:intergenic
CCACTCCGAGTCCGTAGCAA+AGG 0.581627 5_4:+41714871 Msa0851460:CDS
GACTCGGAATGCCATCGGGG+AGG 0.582697 5_4:-41725378 None:intergenic
AACTTTCAAGCTCAGAAAGA+GGG 0.582752 5_4:+41725609 Msa0851460:CDS
GGCATTCCGAGTCCGTAGCA+AGG 0.583134 5_4:+41725388 Msa0851460:CDS
ACCTGGTGGAGAGTGGCGAT+TGG 0.592984 5_4:-41714722 None:intergenic
GCTTTCCAAGATGATGATGA+TGG 0.594721 5_4:-41714352 None:intergenic
AGCAGGTGCTGGGAAATCTA+GGG 0.597989 5_4:+41715009 Msa0851460:intron
GGTGAATCGATAAGTTGTTG+AGG 0.598391 5_4:-41725113 None:intergenic
ACCTGGTGGAGACTGGCGAT+TGG 0.601732 5_4:-41725186 None:intergenic
GAAAGTTACCTGGTGGAGAG+TGG 0.601861 5_4:-41714729 None:intergenic
ATCATCTTGGAAACCAGCTA+GGG 0.603914 5_4:+41724823 Msa0851460:CDS
TTAGATCGATCAGAAGGGAG+TGG 0.604132 5_4:-41714670 None:intergenic
TTAGATCGATCAGAAGGGAG+TGG 0.604132 5_4:-41725134 None:intergenic
GGTTTCCAAGATGATGATGA+TGG 0.608728 5_4:-41724815 None:intergenic
AGTGAAATGGATTTCTGAGA+GGG 0.609329 5_4:-41725524 None:intergenic
GCATTCCGAGTCCGTAGCAA+GGG 0.609627 5_4:+41725389 Msa0851460:CDS
GGTGAATCGATAGGTTGTTG+AGG 0.609852 5_4:-41714649 None:intergenic
CTTCGAAAAGCTAGGGTTGG+GGG 0.615710 5_4:+41725302 Msa0851460:CDS
ACTTCGAAAAGCTAGGGTTG+GGG 0.618419 5_4:+41725301 Msa0851460:CDS
AACATCTCGGAAAGTTGCCA+GGG 0.619231 5_4:+41714504 Msa0851460:five_prime_UTR
AACATCTCGGAAAGTTGCCA+GGG 0.619231 5_4:+41724968 Msa0851460:CDS
GTCAACGGAGTAATGAGAGA+GGG 0.625990 5_4:+41725708 Msa0851460:CDS
GAACTTTCAAGCTTTGAGAG+AGG 0.626782 5_4:+41715103 Msa0851460:CDS
CAGCAGAACGTTATAGCTGG+TGG 0.629187 5_4:+41725686 Msa0851460:CDS
ACAACCTCTCAATGATGAGG+AGG 0.629580 5_4:+41715318 Msa0851460:CDS
ACAACCTCTCAGTGATGAGG+AGG 0.629990 5_4:+41725829 Msa0851460:CDS
GAAGGGAGTGGTGAATCGAT+AGG 0.630020 5_4:-41714658 None:intergenic
AAGTCCTCCTCATCATTGAG+AGG 0.631486 5_4:-41715322 None:intergenic
AAAACAATATACCATTAACA+TGG 0.641893 5_4:-41724871 None:intergenic
CAAATCGATTTCAAACTCTG+AGG 0.646763 5_4:+41725016 Msa0851460:CDS
CAGCAGAACGTTATAGCTGG+TGG 0.647808 5_4:+41715175 Msa0851460:CDS
TCAACAACCTCTCAATGATG+AGG 0.649608 5_4:+41715315 Msa0851460:CDS
TCAACAACCTCTCAGTGATG+AGG 0.652314 5_4:+41725826 Msa0851460:CDS
GAATCTGAATCCGATGACAA+TGG 0.666926 5_4:+41715427 Msa0851460:CDS
TTTCAAGCTCAGAAAGAGGG+AGG 0.669513 5_4:+41725612 Msa0851460:CDS
AAGTGAAATGGATTTCTGAG+AGG 0.673162 5_4:-41725525 None:intergenic
TCAACGGAGTAATGAGAGAG+GGG 0.684238 5_4:+41725709 Msa0851460:CDS
CCTTTGCTACGGACTCGGAG+TGG 0.691861 5_4:-41714871 None:intergenic
CAACGGAGTAATGAGAGAGG+GGG 0.692151 5_4:+41725710 Msa0851460:CDS
AAGTCCTCCTCATCACTGAG+AGG 0.694124 5_4:-41725833 None:intergenic
GAATCCGAATCCGATGACAA+TGG 0.703989 5_4:+41725938 Msa0851460:CDS
ACGGACTCGGAATGCCATCG+GGG 0.706094 5_4:-41725381 None:intergenic
GGTCAACGGAGTAATGAGAG+AGG 0.706998 5_4:+41725707 Msa0851460:CDS
AAAACAATATACCATTAACG+TGG 0.722104 5_4:-41714408 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAAAAAAAATAAAAAA+AGG - chr5_4:41715624-41715643 None:intergenic 0.0%
!! TATATATATATATATATATA+TGG + chr5_4:41723064-41723083 Msa0851460:intron 0.0%
!! ATATATATATATATATATAT+GGG + chr5_4:41723063-41723082 Msa0851460:intron 0.0%
!! TATATATATATATATATATA+GGG - chr5_4:41723064-41723083 None:intergenic 0.0%
!! ATATATATATATATATATAT+AGG - chr5_4:41723063-41723082 None:intergenic 0.0%
!! AAATATATTATATCAGAAAA+AGG - chr5_4:41714951-41714970 None:intergenic 10.0%
!!! TTTATATGTATTTTTTTGAT+TGG + chr5_4:41714986-41715005 Msa0851460:intron 10.0%
!!! AACTTTAATTTATTTTTGAA+CGG + chr5_4:41717455-41717474 Msa0851460:intron 10.0%
!!! TAAAATAAAATCAATTTTAG+AGG - chr5_4:41718996-41719015 None:intergenic 10.0%
!!! AATTGATTTTATTTTAAGTT+AGG + chr5_4:41719000-41719019 Msa0851460:intron 10.0%
!!! TTTTTTTTAAGAAATCAAAA+TGG + chr5_4:41719630-41719649 Msa0851460:intron 10.0%
!!! TTTTTTTAAGAAATCAAAAT+GGG + chr5_4:41719631-41719650 Msa0851460:intron 10.0%
!!! ATTTTTATTAAACTTTTTTG+GGG - chr5_4:41720941-41720960 None:intergenic 10.0%
!!! CTATTTTTATTAAACTTTTT+TGG - chr5_4:41720943-41720962 None:intergenic 10.0%
!! TAGCTAATAATTTATTTAAA+GGG - chr5_4:41721426-41721445 None:intergenic 10.0%
!!! TTTTAAAAAATTAATAAGAG+TGG + chr5_4:41723790-41723809 Msa0851460:intron 10.0%
!! AAAAGTCTATTAATTTAATT+AGG - chr5_4:41724228-41724247 None:intergenic 10.0%
!! AATAAATATATATCAGAAAA+AGG - chr5_4:41725462-41725481 None:intergenic 10.0%
!!! TTTTTCTGATATATATTTAT+TGG + chr5_4:41725461-41725480 Msa0851460:intron 10.0%
!!! TTTTCTCTTTTAATTTAGAA+TGG + chr5_4:41715742-41715761 Msa0851460:intron 15.0%
!! ATAATCATATATTCAAGAAT+AGG + chr5_4:41716632-41716651 Msa0851460:intron 15.0%
!! AAATTTGTATAGATAAAGAA+AGG - chr5_4:41717428-41717447 None:intergenic 15.0%
!!! TTCTTTATCTATACAAATTT+TGG + chr5_4:41717428-41717447 Msa0851460:intron 15.0%
!! AGTAAATTATCAATATCAAA+AGG - chr5_4:41718397-41718416 None:intergenic 15.0%
!!! TTTCATAGTTTTTACATATT+TGG + chr5_4:41718545-41718564 Msa0851460:intron 15.0%
!!! GTACATATTATTATTTTTGA+CGG + chr5_4:41719350-41719369 Msa0851460:intron 15.0%
!!! GCTTAATTTTATTTTTCTTA+AGG - chr5_4:41719555-41719574 None:intergenic 15.0%
!! AATAATTTATTTAAAGGGTA+TGG - chr5_4:41721421-41721440 None:intergenic 15.0%
!! GTAGCTAATAATTTATTTAA+AGG - chr5_4:41721427-41721446 None:intergenic 15.0%
!! ACAATTGTAAAATTTATAGA+TGG + chr5_4:41722843-41722862 Msa0851460:intron 15.0%
!! TATATATATATATATGGGTT+AGG + chr5_4:41723090-41723109 Msa0851460:intron 15.0%
!!! TTTTTTGAAATTGAAATGAA+GGG - chr5_4:41723304-41723323 None:intergenic 15.0%
!! AAAATTTCAACAAATTTATC+CGG + chr5_4:41723474-41723493 Msa0851460:intron 15.0%
!!! TTATTTTGAAATTGAAATGA+AGG + chr5_4:41723851-41723870 Msa0851460:intron 15.0%
!!! TATTTTGAAATTGAAATGAA+GGG + chr5_4:41723852-41723871 Msa0851460:intron 15.0%
!!! ATTCAATTTGTTTAATCTAA+AGG - chr5_4:41723994-41724013 None:intergenic 15.0%
!! TTTAGATTAAACAAATTGAA+TGG + chr5_4:41723993-41724012 Msa0851460:intron 15.0%
!! ATATATATATATATAGGGTT+AGG - chr5_4:41724066-41724085 None:intergenic 15.0%
!! AAGTTATAAATATCTTACTT+AGG - chr5_4:41724386-41724405 None:intergenic 15.0%
!!! ATTTTTCAATAATGTGATAA+AGG + chr5_4:41724503-41724522 Msa0851460:intron 15.0%
!!! TATCAAGATTTTCTTTTTTA+GGG - chr5_4:41725343-41725362 None:intergenic 15.0%
!!! TTATCAAGATTTTCTTTTTT+AGG - chr5_4:41725344-41725363 None:intergenic 15.0%
!! TCTAATTAATTAAACAGAGT+TGG - chr5_4:41715672-41715691 None:intergenic 20.0%
!! AAAGTAGTACTAGTAATTAA+AGG - chr5_4:41715709-41715728 None:intergenic 20.0%
!! AAAAAAAATCTCAACTGAAT+CGG - chr5_4:41715768-41715787 None:intergenic 20.0%
!! ATGATCATATATTCAAGAAT+AGG + chr5_4:41716062-41716081 Msa0851460:intron 20.0%
!! AAAACTCAAAATGTACAAAA+AGG - chr5_4:41716531-41716550 None:intergenic 20.0%
!!! TTGTACATTTTGAGTTTTAT+AGG + chr5_4:41716533-41716552 Msa0851460:intron 20.0%
!!! TGTACATTTTGAGTTTTATA+GGG + chr5_4:41716534-41716553 Msa0851460:intron 20.0%
!!! AGCATATTTTATATATGGAT+TGG - chr5_4:41718514-41718533 None:intergenic 20.0%
!!! ATTTTAACATATCCTAATCA+GGG + chr5_4:41718622-41718641 Msa0851460:intron 20.0%
!! AACATACATTAAATAATGTG+TGG - chr5_4:41718695-41718714 None:intergenic 20.0%
!! GAAAACACAATTGATTATAA+AGG + chr5_4:41718727-41718746 Msa0851460:intron 20.0%
!! AAAATGGGATATATTAACAA+CGG + chr5_4:41719646-41719665 Msa0851460:intron 20.0%
!!! AATAATATCTCTTTTGTGTA+TGG - chr5_4:41719804-41719823 None:intergenic 20.0%
!!! ATACATTATTTTGGTATGAT+AGG - chr5_4:41720589-41720608 None:intergenic 20.0%
!! ATCATACCAAAATAATGTAT+TGG + chr5_4:41720589-41720608 Msa0851460:intron 20.0%
!!! TTTTGAAAAAGCTTATGATT+CGG - chr5_4:41721674-41721693 None:intergenic 20.0%
!! AAAATTTATCTTATGTCGAA+GGG - chr5_4:41722152-41722171 None:intergenic 20.0%
!! AAAAATTTATCTTATGTCGA+AGG - chr5_4:41722153-41722172 None:intergenic 20.0%
!!! TCATTTTAAACATCATTTTG+CGG - chr5_4:41722217-41722236 None:intergenic 20.0%
!! TTGTCCATAAAAAATATGTT+TGG - chr5_4:41722497-41722516 None:intergenic 20.0%
!! TATATTTGTGTGAACTATTA+AGG - chr5_4:41722966-41722985 None:intergenic 20.0%
!! GTCATACAAAATAATAATTG+TGG + chr5_4:41723007-41723026 Msa0851460:intron 20.0%
!! TTTGGATTAAACAAATTGAA+TGG - chr5_4:41723163-41723182 None:intergenic 20.0%
!!! ATTCAATTTGTTTAATCCAA+AGG + chr5_4:41723162-41723181 Msa0851460:intron 20.0%
!! AGTGCAAAATAAACTATTAA+AGG - chr5_4:41723253-41723272 None:intergenic 20.0%
!!! GTTTTTTGAAATTGAAATGA+AGG - chr5_4:41723305-41723324 None:intergenic 20.0%
!!! TTTTAAAAACTAATGCTTAG+TGG - chr5_4:41723778-41723797 None:intergenic 20.0%
!! AAATGTAATATACTCGTATA+CGG + chr5_4:41724156-41724175 Msa0851460:intron 20.0%
!!! TAACTTTTTTTATATTTGCG+TGG + chr5_4:41724400-41724419 Msa0851460:intron 20.0%
!! AAGGAAAGTTTATATTTAAC+CGG - chr5_4:41724572-41724591 None:intergenic 20.0%
!! TATAAACATAAGACGATAAT+TGG - chr5_4:41724741-41724760 None:intergenic 20.0%
!! AAAACAATATACCATTAACA+TGG - chr5_4:41724874-41724893 None:intergenic 20.0%
!! AAAATTAGATGAACTCATAT+TGG + chr5_4:41725907-41725926 Msa0851460:CDS 20.0%
! AAAACAATATACCATTAACG+TGG - chr5_4:41714411-41714430 None:intergenic 25.0%
! ATCAATCAAGATATTAGCAA+AGG - chr5_4:41714469-41714488 None:intergenic 25.0%
! TTGCTAATATCTTGATTGAT+TGG + chr5_4:41714469-41714488 Msa0851460:intron 25.0%
! ATATCTTGATTGATTGGAAT+AGG + chr5_4:41714475-41714494 Msa0851460:intron 25.0%
!! TTTGAAATCAATTTGAGAGA+AGG - chr5_4:41714547-41714566 None:intergenic 25.0%
! TCAAGAATAGAATTAGGTTA+GGG - chr5_4:41714792-41714811 None:intergenic 25.0%
! ATCAAGAATAGAATTAGGTT+AGG - chr5_4:41714793-41714812 None:intergenic 25.0%
! ACTCAATCAAGAATAGAATT+AGG - chr5_4:41714798-41714817 None:intergenic 25.0%
! TAGGAAAATAATACACACAA+GGG - chr5_4:41715563-41715582 None:intergenic 25.0%
!!! AATGAAGAAGAGTATTTAGA+TGG + chr5_4:41715907-41715926 Msa0851460:intron 25.0%
!!! ATGAAGAAGAGTATTTAGAT+GGG + chr5_4:41715908-41715927 Msa0851460:intron 25.0%
! AAATGTACAAAAAGGTTTGA+TGG - chr5_4:41716010-41716029 None:intergenic 25.0%
!! ATCAAACCTTTTTGTACATT+TGG + chr5_4:41716009-41716028 Msa0851460:intron 25.0%
!!! TTTTTAATTCAGTTTGTCTG+CGG + chr5_4:41716293-41716312 Msa0851460:intron 25.0%
!!! AATGAAGAAGAGTATTTAGA+TGG + chr5_4:41715907-41715926 Msa0851460:intron 25.0%
!!! ATGAAGAAGAGTATTTAGAT+GGG + chr5_4:41715908-41715927 Msa0851460:intron 25.0%
! AAATGTACAAAAAGGTTTGA+TGG - chr5_4:41716010-41716029 None:intergenic 25.0%
!!! GTACATTTTGAGTTTTATAG+GGG + chr5_4:41716535-41716554 Msa0851460:intron 25.0%
!!! TTTTTAATTCAGTTTGTCTG+CGG + chr5_4:41716293-41716312 Msa0851460:intron 25.0%
! AAACAGCGAAAATTTATTAG+AGG - chr5_4:41717153-41717172 None:intergenic 25.0%
!! GAAAGGAAAAAGTATATCTA+AGG - chr5_4:41717317-41717336 None:intergenic 25.0%
!! TTTTGATACAAATGATGAAG+TGG - chr5_4:41717383-41717402 None:intergenic 25.0%
!! TGTAATTTTGAACACAATTC+CGG - chr5_4:41717522-41717541 None:intergenic 25.0%
!!! CATATGCTTTATTTGAACAT+TGG - chr5_4:41717567-41717586 None:intergenic 25.0%
!!! GTATTATTAGGCTTTGTTTT+TGG - chr5_4:41717643-41717662 None:intergenic 25.0%
!! TTTTGTGGCTTAGTATTATT+AGG - chr5_4:41717655-41717674 None:intergenic 25.0%
! TCACAAGAAAAACATAAATG+TGG + chr5_4:41718031-41718050 Msa0851460:intron 25.0%
! AAAAACATAAATGTGGACAT+AGG + chr5_4:41718038-41718057 Msa0851460:intron 25.0%
! ATATTTGTTTCAGAATTGTG+AGG - chr5_4:41718095-41718114 None:intergenic 25.0%
! ATCTATATTTGTGACTCATT+AGG + chr5_4:41718115-41718134 Msa0851460:intron 25.0%
! GGTTAAAAGATCATTTGAAT+AGG + chr5_4:41718254-41718273 Msa0851460:intron 25.0%
! GGCTAATGAAATAATCAATT+AGG + chr5_4:41718275-41718294 Msa0851460:intron 25.0%
! ATCAATATCAAAAGGAAAAC+TGG - chr5_4:41718389-41718408 None:intergenic 25.0%
!! ACGTGAGCATATTTTATATA+TGG - chr5_4:41718519-41718538 None:intergenic 25.0%
!!! GATTTTAACATATCCTAATC+AGG + chr5_4:41718621-41718640 Msa0851460:intron 25.0%
! TACATTAAATAATGTGTGGA+GGG - chr5_4:41718691-41718710 None:intergenic 25.0%
! ATACATTAAATAATGTGTGG+AGG - chr5_4:41718692-41718711 None:intergenic 25.0%
!!! TTTTTTTTTTTTGTGGTGAC+CGG + chr5_4:41718853-41718872 Msa0851460:intron 25.0%
! TGCATAATATATGCAAAGTT+CGG - chr5_4:41718889-41718908 None:intergenic 25.0%
!! TTTAGAGGCATAATCAATTA+TGG - chr5_4:41718981-41719000 None:intergenic 25.0%
!!! AAATCACTTTTAACCAAAGT+CGG + chr5_4:41719121-41719140 Msa0851460:intron 25.0%
! CCAAAAAAACTCTAGTAATA+TGG - chr5_4:41719383-41719402 None:intergenic 25.0%
!!! CCATATTACTAGAGTTTTTT+TGG + chr5_4:41719380-41719399 Msa0851460:intron 25.0%
! TACAAATTTATACATTCCAC+AGG - chr5_4:41719987-41720006 None:intergenic 25.0%
!! AAATGATCATGTATGTTTTG+AGG + chr5_4:41720008-41720027 Msa0851460:intron 25.0%
!!! CTTTGCAAATTGATTTTAGT+GGG + chr5_4:41720176-41720195 Msa0851460:intron 25.0%
!!! GTATCAGATTTTGACATATT+CGG - chr5_4:41720300-41720319 None:intergenic 25.0%
!! TGTAAAATAATGTTTCTGAC+AGG - chr5_4:41720370-41720389 None:intergenic 25.0%
!!! ATTATTTTGGTATGATAGGT+GGG - chr5_4:41720585-41720604 None:intergenic 25.0%
!! ATGGTTCCAATACATTATTT+TGG - chr5_4:41720598-41720617 None:intergenic 25.0%
!! AAATTTAATTTAGCCCTGTT+GGG - chr5_4:41720824-41720843 None:intergenic 25.0%
! ATTTGTTTACAAAAGGAGTT+AGG - chr5_4:41720872-41720891 None:intergenic 25.0%
!!! TTATTAAACTTTTTTGGGGA+GGG - chr5_4:41720937-41720956 None:intergenic 25.0%
!!! TTTATTAAACTTTTTTGGGG+AGG - chr5_4:41720938-41720957 None:intergenic 25.0%
!!! AAAGTCGTTTTCTATCATTT+GGG - chr5_4:41721063-41721082 None:intergenic 25.0%
!!! AAAATTCCGTTTTTGTATCT+TGG - chr5_4:41721169-41721188 None:intergenic 25.0%
! TCTGTGTTAAATTGTAAAGT+GGG - chr5_4:41721193-41721212 None:intergenic 25.0%
! ATCTGTGTTAAATTGTAAAG+TGG - chr5_4:41721194-41721213 None:intergenic 25.0%
! CTGCTAACAAAAAAAGAAAA+GGG + chr5_4:41721479-41721498 Msa0851460:intron 25.0%
! TGCTAACAAAAAAAGAAAAG+GGG + chr5_4:41721480-41721499 Msa0851460:intron 25.0%
! AGTAATTTCAGAAACTCATA+CGG - chr5_4:41721800-41721819 None:intergenic 25.0%
!! TGGTTTCATTAAGGATTTTT+GGG - chr5_4:41722034-41722053 None:intergenic 25.0%
!! TTGGTTTCATTAAGGATTTT+TGG - chr5_4:41722035-41722054 None:intergenic 25.0%
!! TGGTTTGATAAAACCTTTTT+CGG - chr5_4:41722127-41722146 None:intergenic 25.0%
!! TATTTTATACTATGCAGTCA+CGG - chr5_4:41722386-41722405 None:intergenic 25.0%
! ATCAATTCTACTACATTGTT+GGG - chr5_4:41722413-41722432 None:intergenic 25.0%
! AATCAATTCTACTACATTGT+TGG - chr5_4:41722414-41722433 None:intergenic 25.0%
!!! GAAGCCAAACATATTTTTTA+TGG + chr5_4:41722490-41722509 Msa0851460:intron 25.0%
! TCAAACATTATATGTTACAG+AGG + chr5_4:41722533-41722552 Msa0851460:intron 25.0%
! TGAAATTTGTAACACAAACT+AGG - chr5_4:41722725-41722744 None:intergenic 25.0%
! CAAATTGAATGGATAAGATT+TGG - chr5_4:41723152-41723171 None:intergenic 25.0%
!!! TGAATAACGAAAGTTTTTTC+CGG - chr5_4:41723496-41723515 None:intergenic 25.0%
!! AAAACTGTAATAGTGTTTTG+TGG + chr5_4:41723683-41723702 Msa0851460:intron 25.0%
!! TACATTTTCCCTCAAAAAAA+AGG + chr5_4:41723721-41723740 Msa0851460:intron 25.0%
! AGTGCAAAATCAACTATTAA+AGG + chr5_4:41723903-41723922 Msa0851460:intron 25.0%
! AATGTAATATACTCGTATAC+GGG + chr5_4:41724157-41724176 Msa0851460:intron 25.0%
! TCTATTAATTTAATTAGGCC+AGG - chr5_4:41724223-41724242 None:intergenic 25.0%
!!! TGTGATAAAGGAAGTATTTA+AGG + chr5_4:41724515-41724534 Msa0851460:intron 25.0%
!!! GTGATAAAGGAAGTATTTAA+GGG + chr5_4:41724516-41724535 Msa0851460:intron 25.0%
!!! TGATAAAGGAAGTATTTAAG+GGG + chr5_4:41724517-41724536 Msa0851460:intron 25.0%
!! TTTTTATACTTCTTCAAGCA+AGG + chr5_4:41724604-41724623 Msa0851460:intron 25.0%
! AAAAGAAGAGTTAATTAACC+TGG - chr5_4:41724695-41724714 None:intergenic 25.0%
! TGATATTTGTTTCCAATGAA+TGG + chr5_4:41714440-41714459 Msa0851460:intron 25.0%
! ATCAATCAAGATATTAGCAA+AGG - chr5_4:41714469-41714488 None:intergenic 25.0%
! TTGCTAATATCTTGATTGAT+TGG + chr5_4:41714469-41714488 Msa0851460:intron 25.0%
! ATATCTTGATTGATTGGAAT+AGG + chr5_4:41714475-41714494 Msa0851460:intron 25.0%
! CAAAATCAAGAATTAGGTTA+GGG - chr5_4:41725256-41725275 None:intergenic 25.0%
! ACAAAATCAAGAATTAGGTT+AGG - chr5_4:41725257-41725276 None:intergenic 25.0%
! AACACACAAAATCAAGAATT+AGG - chr5_4:41725262-41725281 None:intergenic 25.0%
! TGATATATATTTATTGGAGC+AGG + chr5_4:41725467-41725486 Msa0851460:intron 25.0%
AGTTCTTGATTAATTGTAGC+AGG + chr5_4:41714322-41714341 Msa0851460:five_prime_UTR 30.0%
! CAAATTGATTTCAAACTCTG+AGG + chr5_4:41714552-41714571 Msa0851460:five_prime_UTR 30.0%
! TTCTTTTAGATCGATCAGAA+GGG - chr5_4:41714678-41714697 None:intergenic 30.0%
! TTTCTTTTAGATCGATCAGA+AGG - chr5_4:41714679-41714698 None:intergenic 30.0%
TTTCAAATATTCCAAACCAG+AGG - chr5_4:41714769-41714788 None:intergenic 30.0%
TGAAAACAATACCTTTGCTA+CGG - chr5_4:41714885-41714904 None:intergenic 30.0%
!!! TGTATTTTTTTGATTGGAGC+AGG + chr5_4:41714992-41715011 Msa0851460:intron 30.0%
!!! TCTGACCACAATATTTTAGT+TGG + chr5_4:41715061-41715080 Msa0851460:CDS 30.0%
!!! CTGACCACAATATTTTAGTT+GGG + chr5_4:41715062-41715081 Msa0851460:CDS 30.0%
!!! TGACCACAATATTTTAGTTG+GGG + chr5_4:41715063-41715082 Msa0851460:CDS 30.0%
TCAATCCAAATGTTCTCTAA+AGG - chr5_4:41715256-41715275 None:intergenic 30.0%
!! TCTCACTTTTGAACAAATAG+CGG + chr5_4:41715363-41715382 Msa0851460:CDS 30.0%
AAAATTACATGAACGCATGA+TGG + chr5_4:41715396-41715415 Msa0851460:CDS 30.0%
!! ACTTTGAAGAGTTGGATTTT+AGG + chr5_4:41715518-41715537 Msa0851460:intron 30.0%
!! CTTTGAAGAGTTGGATTTTA+GGG + chr5_4:41715519-41715538 Msa0851460:intron 30.0%
GTAGGAAAATAATACACACA+AGG - chr5_4:41715564-41715583 None:intergenic 30.0%
! AAGAAATCTAAGATGACAAG+TGG - chr5_4:41715593-41715612 None:intergenic 30.0%
GTAGTACTAGTAATTAAAGG+AGG - chr5_4:41715706-41715725 None:intergenic 30.0%
!! ATCGTATGATTTTAGTCTAG+CGG + chr5_4:41715847-41715866 Msa0851460:intron 30.0%
AAGAATAGGTCAAGAGATTA+TGG + chr5_4:41716076-41716095 Msa0851460:intron 30.0%
!! TGAGATAGTGGATGAAATAA+AGG + chr5_4:41716099-41716118 Msa0851460:intron 30.0%
! TCTTTTCTACGAATGGTATT+GGG + chr5_4:41716168-41716187 Msa0851460:intron 30.0%
AAAATGTGTCAAGAGACAAA+AGG + chr5_4:41716198-41716217 Msa0851460:intron 30.0%
! TTCTATGTTCTGTTTTCATG+TGG + chr5_4:41716354-41716373 Msa0851460:intron 30.0%
AAAAGCTTAGAAGGAGTTAT+TGG + chr5_4:41716570-41716589 Msa0851460:intron 30.0%
! GAAGGAGTTATTGGTTAATT+TGG + chr5_4:41716579-41716598 Msa0851460:intron 30.0%
!!! AGCTGTCTGTGTTTATTTTA+CGG + chr5_4:41717044-41717063 Msa0851460:intron 30.0%
!!! TTTATTTTACGGGGTTTTTC+AGG + chr5_4:41717055-41717074 Msa0851460:intron 30.0%
!! TTATTTTACGGGGTTTTTCA+GGG + chr5_4:41717056-41717075 Msa0851460:intron 30.0%
! TTTGAACATTGGCTGTTTAT+CGG - chr5_4:41717556-41717575 None:intergenic 30.0%
CATCAGAAGCTAAATACTAA+CGG + chr5_4:41717679-41717698 Msa0851460:intron 30.0%
TCTTGCTTCAATTCATACTA+AGG - chr5_4:41717752-41717771 None:intergenic 30.0%
GTTTGTATTATTTGAGTCAG+TGG - chr5_4:41717962-41717981 None:intergenic 30.0%
! TGTTTTTCTTGTGAGTAATC+TGG - chr5_4:41718025-41718044 None:intergenic 30.0%
! TTTTAGTGAATACCGATGAT+TGG + chr5_4:41718298-41718317 Msa0851460:intron 30.0%
ATATCAAAAGGAAAACTGGA+GGG - chr5_4:41718385-41718404 None:intergenic 30.0%
AATATCAAAAGGAAAACTGG+AGG - chr5_4:41718386-41718405 None:intergenic 30.0%
ATTTGAATTGACGAATTTGG+AGG - chr5_4:41718448-41718467 None:intergenic 30.0%
CTAATCAGGGATGAATTTAA+GGG + chr5_4:41718635-41718654 Msa0851460:intron 30.0%
ACATTAAATAATGTGTGGAG+GGG - chr5_4:41718690-41718709 None:intergenic 30.0%
!!! TTTTTTTTTTTGTGGTGACC+GGG + chr5_4:41718854-41718873 Msa0851460:intron 30.0%
CATAATATATGCAAAGTTCG+GGG - chr5_4:41718887-41718906 None:intergenic 30.0%
GCATAATATATGCAAAGTTC+GGG - chr5_4:41718888-41718907 None:intergenic 30.0%
AGAACCTATATGTGTATGTT+TGG + chr5_4:41718938-41718957 Msa0851460:intron 30.0%
! ACTTAAAATAGAACCGACTT+TGG - chr5_4:41719137-41719156 None:intergenic 30.0%
!!! CCAACTGTTTTTGTTTTACA+CGG - chr5_4:41719495-41719514 None:intergenic 30.0%
AGCATGCTTCACATATAATA+AGG + chr5_4:41719572-41719591 Msa0851460:intron 30.0%
!!! TTGTATGACACTTTGTTTTC+CGG - chr5_4:41719714-41719733 None:intergenic 30.0%
AGTCATTTCTTCAATTGCTT+TGG - chr5_4:41719947-41719966 None:intergenic 30.0%
CCACTAAAATCAATTTGCAA+AGG - chr5_4:41720178-41720197 None:intergenic 30.0%
!! CCTTTGCAAATTGATTTTAG+TGG + chr5_4:41720175-41720194 Msa0851460:intron 30.0%
! AAAATAATGTTTCTGACAGG+TGG - chr5_4:41720367-41720386 None:intergenic 30.0%
!!! CATTATTTTGGTATGATAGG+TGG - chr5_4:41720586-41720605 None:intergenic 30.0%
!! TTTGGTATAGGGTTTTAGTA+GGG - chr5_4:41720763-41720782 None:intergenic 30.0%
!! TTTTGGTATAGGGTTTTAGT+AGG - chr5_4:41720764-41720783 None:intergenic 30.0%
! GAAATTTAATTTAGCCCTGT+TGG - chr5_4:41720825-41720844 None:intergenic 30.0%
GAGCTCTATTTGTTTACAAA+AGG - chr5_4:41720879-41720898 None:intergenic 30.0%
ATGATAGAGATTATACCTGA+CGG + chr5_4:41720968-41720987 Msa0851460:intron 30.0%
AAAAAGGAAAGAACATAGAC+AGG + chr5_4:41720998-41721017 Msa0851460:intron 30.0%
!! AAGTCGTTTTCTATCATTTG+GGG - chr5_4:41721062-41721081 None:intergenic 30.0%
!! CAAAGTCGTTTTCTATCATT+TGG - chr5_4:41721064-41721083 None:intergenic 30.0%
TACCATTAAGTCTAGATTGT+CGG - chr5_4:41721092-41721111 None:intergenic 30.0%
TTTGATAAGAGTTTACTGGT+TGG - chr5_4:41721253-41721272 None:intergenic 30.0%
GAACTTTGATAAGAGTTTAC+TGG - chr5_4:41721257-41721276 None:intergenic 30.0%
!!! TTTTTTTGTTAGCAGCTGAA+GGG - chr5_4:41721474-41721493 None:intergenic 30.0%
GCTGCTAACAAAAAAAGAAA+AGG + chr5_4:41721478-41721497 Msa0851460:intron 30.0%
AAAAAAAGAAAAGGGGAAAG+CGG + chr5_4:41721487-41721506 Msa0851460:intron 30.0%
TGAGGCAAAAAAGTCAAAAA+AGG - chr5_4:41721719-41721738 None:intergenic 30.0%
TATACTTATTGCAAATGAGG+TGG - chr5_4:41721746-41721765 None:intergenic 30.0%
TGGTATACTTATTGCAAATG+AGG - chr5_4:41721749-41721768 None:intergenic 30.0%
AAAGATCCAACCAAAGAAAT+TGG + chr5_4:41721874-41721893 Msa0851460:intron 30.0%
TGATTATAGGCCAATTTCTT+TGG - chr5_4:41721887-41721906 None:intergenic 30.0%
CCTATAATCATTTAAGCTCT+GGG + chr5_4:41721897-41721916 Msa0851460:intron 30.0%
CTATAATCATTTAAGCTCTG+GGG + chr5_4:41721898-41721917 Msa0851460:intron 30.0%
AGTGAATCTTGGTTTCATTA+AGG - chr5_4:41722043-41722062 None:intergenic 30.0%
AGAAAAAATTGCACTTCGAA+TGG + chr5_4:41722236-41722255 Msa0851460:intron 30.0%
GAAAAAATTGCACTTCGAAT+GGG + chr5_4:41722237-41722256 Msa0851460:intron 30.0%
ATCGTTTCTTTATTAGTGGA+CGG - chr5_4:41722285-41722304 None:intergenic 30.0%
TGCTATCGTTTCTTTATTAG+TGG - chr5_4:41722289-41722308 None:intergenic 30.0%
! AAATTCGAAGTATTTCCACT+CGG - chr5_4:41722337-41722356 None:intergenic 30.0%
TTCTACTAATCCCATAAGTT+AGG + chr5_4:41722432-41722451 Msa0851460:intron 30.0%
AGCTTGTATTCCTAACTTAT+GGG - chr5_4:41722445-41722464 None:intergenic 30.0%
AAGCTTGTATTCCTAACTTA+TGG - chr5_4:41722446-41722465 None:intergenic 30.0%
CTTAAAATAAAGCCTTTGAC+AGG - chr5_4:41722650-41722669 None:intergenic 30.0%
! ACAAACTAGGCTTTTAAACA+GGG - chr5_4:41722712-41722731 None:intergenic 30.0%
AGTATGTTGCACAAATTGAA+AGG - chr5_4:41722775-41722794 None:intergenic 30.0%
CTAATAGCTATATTGACCTT+AGG + chr5_4:41722925-41722944 Msa0851460:intron 30.0%
ATTGTGGTATGAGAATTTGA+AGG + chr5_4:41723023-41723042 Msa0851460:intron 30.0%
!! ATATATGGGTTAGGATCAAA+TGG + chr5_4:41723099-41723118 Msa0851460:intron 30.0%
!! TCATATTTAGTTTGACACCT+TGG - chr5_4:41724029-41724048 None:intergenic 30.0%
!!! TAGTGATTGTTTTAAGCCTT+TGG - chr5_4:41723975-41723994 None:intergenic 30.0%
CAATTCCTGTATAGTTGTAA+AGG + chr5_4:41723390-41723409 Msa0851460:intron 30.0%
GTTTGCATTCACATAAAAAG+TGG - chr5_4:41723429-41723448 None:intergenic 30.0%
!!! GTACATGACCTTTTTTTTGA+GGG - chr5_4:41723732-41723751 None:intergenic 30.0%
!!! TGTACATGACCTTTTTTTTG+AGG - chr5_4:41723733-41723752 None:intergenic 30.0%
CAAATTGAATGGATGAGATT+TGG + chr5_4:41724004-41724023 Msa0851460:intron 30.0%
!! TCATATTTAGTTTGACACCT+TGG + chr5_4:41724029-41724048 Msa0851460:intron 30.0%
!! GATAAAGGAAGTATTTAAGG+GGG + chr5_4:41724518-41724537 Msa0851460:intron 30.0%
AAACATAAGACGATAATTGG+TGG - chr5_4:41724738-41724757 None:intergenic 30.0%
AGTTCTTGATTAATTGTAGC+AGG + chr5_4:41714322-41714341 Msa0851460:five_prime_UTR 30.0%
!! TTTGAAATCGATTTGAGAGA+AGG - chr5_4:41725011-41725030 None:intergenic 30.0%
! TTCTTTTAGATCGATCAGAA+GGG - chr5_4:41714678-41714697 None:intergenic 30.0%
! TTTCTTTTAGATCGATCAGA+AGG - chr5_4:41714679-41714698 None:intergenic 30.0%
TTTCAAATAATCCAATCCAG+AGG - chr5_4:41725233-41725252 None:intergenic 30.0%
!!! TTCTTTTTTAGGGTTATCAG+AGG - chr5_4:41725333-41725352 None:intergenic 30.0%
TCAATCCAAATGTTCTCTAA+AGG - chr5_4:41715256-41715275 None:intergenic 30.0%
!! TCTCACTTTTGAACAAATAG+CGG + chr5_4:41715363-41715382 Msa0851460:CDS 30.0%
AAAAAACGAGTCCACGTTAA+TGG + chr5_4:41714397-41714416 Msa0851460:five_prime_UTR 35.0%
GAATAGGAATTGCAACATCT+CGG + chr5_4:41714491-41714510 Msa0851460:intron 35.0%
!!! GACCACAATATTTTAGTTGG+GGG + chr5_4:41715064-41715083 Msa0851460:CDS 35.0%
!!! AATATTTTAGTTGGGGGTCA+AGG + chr5_4:41715070-41715089 Msa0851460:CDS 35.0%
!!! ATATTTTAGTTGGGGGTCAA+GGG + chr5_4:41715071-41715090 Msa0851460:CDS 35.0%
!! AACTTTCAAGCTTTGAGAGA+GGG + chr5_4:41715104-41715123 Msa0851460:CDS 35.0%
TCAGAAAACTTCAAAGGTTG+AGG - chr5_4:41715154-41715173 None:intergenic 35.0%
! CAAATGTTCTCTAAAGGTTG+AGG - chr5_4:41715250-41715269 None:intergenic 35.0%
! CTCAACCTTTAGAGAACATT+TGG + chr5_4:41715248-41715267 Msa0851460:CDS 35.0%
ATTGTCATCGGATTCAGATT+CGG - chr5_4:41715428-41715447 None:intergenic 35.0%
!! GTTGTTTCTGTTCTGAGAAA+GGG + chr5_4:41715930-41715949 Msa0851460:intron 35.0%
AAGAGATTATGGTGAGATAG+TGG + chr5_4:41716087-41716106 Msa0851460:intron 35.0%
ATGAAATAAAGGTAGTGCCT+TGG + chr5_4:41716110-41716129 Msa0851460:intron 35.0%
TACCATTCGTAGAAAAGACA+TGG - chr5_4:41716166-41716185 None:intergenic 35.0%
! GTCTTTTCTACGAATGGTAT+TGG + chr5_4:41716167-41716186 Msa0851460:intron 35.0%
!! GTTGTTTCTGTTCTGAGAAA+GGG + chr5_4:41715930-41715949 Msa0851460:intron 35.0%
! GTTATTGGTTAATTTGGCAC+TGG + chr5_4:41716585-41716604 Msa0851460:intron 35.0%
AAGAATAGGCCAAGAGATTA+TGG + chr5_4:41716646-41716665 Msa0851460:intron 35.0%
ACTATCTCACCATAATCTCT+TGG - chr5_4:41716088-41716107 None:intergenic 35.0%
AAGAGATTATGGTGAGATAG+TGG + chr5_4:41716087-41716106 Msa0851460:intron 35.0%
! TTCTGTGTTCTGTTTTCATG+TGG + chr5_4:41716848-41716867 Msa0851460:intron 35.0%
!!! TGTTGTTGTTTTCTTGTCGT+AGG + chr5_4:41717002-41717021 Msa0851460:intron 35.0%
! TTGTTTTCTTGTCGTAGGTT+GGG + chr5_4:41717007-41717026 Msa0851460:intron 35.0%
ACAGACAGCTGCAAAAAAAA+TGG - chr5_4:41717034-41717053 None:intergenic 35.0%
!!! GCTGTCTGTGTTTATTTTAC+GGG + chr5_4:41717045-41717064 Msa0851460:intron 35.0%
!!! CTGTCTGTGTTTATTTTACG+GGG + chr5_4:41717046-41717065 Msa0851460:intron 35.0%
!! TATTTTACGGGGTTTTTCAG+GGG + chr5_4:41717057-41717076 Msa0851460:intron 35.0%
ACTGAACATCATCTTGAGAA+AGG - chr5_4:41717334-41717353 None:intergenic 35.0%
CAAATGATGAAGTGGTAGAA+GGG - chr5_4:41717375-41717394 None:intergenic 35.0%
ACAAATGATGAAGTGGTAGA+AGG - chr5_4:41717376-41717395 None:intergenic 35.0%
! TGTTGTTCTGTTTCAAGTGA+GGG - chr5_4:41717602-41717621 None:intergenic 35.0%
! TTGTTGTTCTGTTTCAAGTG+AGG - chr5_4:41717603-41717622 None:intergenic 35.0%
!!! TAGGCTTTGTTTTTGGCTTT+GGG - chr5_4:41717636-41717655 None:intergenic 35.0%
!!! TTAGGCTTTGTTTTTGGCTT+TGG - chr5_4:41717637-41717656 None:intergenic 35.0%
!!! AGCTTCTGATGCTTTTTTTG+TGG - chr5_4:41717670-41717689 None:intergenic 35.0%
CATACTAAGGCTGCTATATT+TGG - chr5_4:41717739-41717758 None:intergenic 35.0%
TTTCTTGTGAGTAATCTGGT+TGG - chr5_4:41718021-41718040 None:intergenic 35.0%
TTAATTCTAGCCAATCGACA+AGG + chr5_4:41718233-41718252 Msa0851460:intron 35.0%
! GATCTTTTAACCTTGTCGAT+TGG - chr5_4:41718246-41718265 None:intergenic 35.0%
TGAATGAAACGACCAATCAT+CGG - chr5_4:41718313-41718332 None:intergenic 35.0%
CGCATTTGAATTGACGAATT+TGG - chr5_4:41718451-41718470 None:intergenic 35.0%
CCTTAAATTCATCCCTGATT+AGG - chr5_4:41718637-41718656 None:intergenic 35.0%
CCTAATCAGGGATGAATTTA+AGG + chr5_4:41718634-41718653 Msa0851460:intron 35.0%
!!! TTTTTTTTTTGTGGTGACCG+GGG + chr5_4:41718855-41718874 Msa0851460:intron 35.0%
GGAACCAAACATACACATAT+AGG - chr5_4:41718945-41718964 None:intergenic 35.0%
! AACGAAACGAGTAAAGTGTT+TGG + chr5_4:41719157-41719176 Msa0851460:intron 35.0%
!!! GAGTAAAGTGTTTGGTTTTG+CGG + chr5_4:41719165-41719184 Msa0851460:intron 35.0%
CCGTGTAAAACAAAAACAGT+TGG + chr5_4:41719492-41719511 Msa0851460:intron 35.0%
ATGGGATATATTAACAACGG+CGG + chr5_4:41719649-41719668 Msa0851460:intron 35.0%
!!! TGTATGACACTTTGTTTTCC+GGG - chr5_4:41719713-41719732 None:intergenic 35.0%
GCTCTTTATGGCAACATATT+AGG - chr5_4:41720061-41720080 None:intergenic 35.0%
AAAATCAATTTGCAAAGGCG+TGG - chr5_4:41720173-41720192 None:intergenic 35.0%
! GGAAATGTTTTCTCTTGGTT+GGG - chr5_4:41720489-41720508 None:intergenic 35.0%
TGTTTACAAAAGGAGTTAGG+AGG - chr5_4:41720869-41720888 None:intergenic 35.0%
!! AGTCGTTTTCTATCATTTGG+GGG - chr5_4:41721061-41721080 None:intergenic 35.0%
ACCATTAAGTCTAGATTGTC+GGG - chr5_4:41721091-41721110 None:intergenic 35.0%
GAGTTAATATTGAGGATTCG+TGG - chr5_4:41721231-41721250 None:intergenic 35.0%
ACTGGTTGGAGTTAATATTG+AGG - chr5_4:41721239-41721258 None:intergenic 35.0%
!! GCTTTTAGGGGAAAAAAGTT+GGG - chr5_4:41721341-41721360 None:intergenic 35.0%
!! TGCTTTTAGGGGAAAAAAGT+TGG - chr5_4:41721342-41721361 None:intergenic 35.0%
TGTATCTCACTTACAGTTTG+CGG - chr5_4:41721374-41721393 None:intergenic 35.0%
! TATTTAAAGGGTATGGCGTT+GGG - chr5_4:41721414-41721433 None:intergenic 35.0%
! TTATTTAAAGGGTATGGCGT+TGG - chr5_4:41721415-41721434 None:intergenic 35.0%
AGGGTTAAACGTTATGATGA+AGG - chr5_4:41721455-41721474 None:intergenic 35.0%
!!! CTTTTTTTGTTAGCAGCTGA+AGG - chr5_4:41721475-41721494 None:intergenic 35.0%
! TGAAAAAGCTTATGATTCGG+TGG - chr5_4:41721671-41721690 None:intergenic 35.0%
AAAGATAGGCAGATTCTTGA+TGG - chr5_4:41721769-41721788 None:intergenic 35.0%
AATCTGCCTATCTTTCACAA+AGG + chr5_4:41721774-41721793 Msa0851460:intron 35.0%
! AACAGGTTGAGAATGGTTAT+TGG - chr5_4:41721826-41721845 None:intergenic 35.0%
TATAGGCCAATTTCTTTGGT+TGG - chr5_4:41721883-41721902 None:intergenic 35.0%
GCCTATAATCATTTAAGCTC+TGG + chr5_4:41721896-41721915 Msa0851460:intron 35.0%
CCCAGAGCTTAAATGATTAT+AGG - chr5_4:41721900-41721919 None:intergenic 35.0%
! GTATCTGATTTTCATCGCAA+CGG - chr5_4:41721982-41722001 None:intergenic 35.0%
TGAAGTAAAAGCGGCAATTT+GGG - chr5_4:41722100-41722119 None:intergenic 35.0%
TTTACTTCAGCTTCCGAAAA+AGG + chr5_4:41722111-41722130 Msa0851460:intron 35.0%
TAGCCTATTTAAGCAAAGCT+CGG - chr5_4:41722587-41722606 None:intergenic 35.0%
AGGCCTAGTTGAAAAAACTA+AGG + chr5_4:41722606-41722625 Msa0851460:intron 35.0%
!!! AGGCCTTAGTTTTTTCAACT+AGG - chr5_4:41722612-41722631 None:intergenic 35.0%
TAAAGCCTTTGACAGGTAAA+AGG - chr5_4:41722643-41722662 None:intergenic 35.0%
!!! GCTTTATTTTAAGCTTGACC+TGG + chr5_4:41722657-41722676 Msa0851460:intron 35.0%
! AGGCTTTTAAACAGGGTAAT+AGG - chr5_4:41722705-41722724 None:intergenic 35.0%
! CACAAACTAGGCTTTTAAAC+AGG - chr5_4:41722713-41722732 None:intergenic 35.0%
! AGAAATCCATAAGTGATGGA+CGG - chr5_4:41723340-41723359 None:intergenic 35.0%
GACAAGAAATCCATAAGTGA+TGG - chr5_4:41723344-41723363 None:intergenic 35.0%
TCAGACCTTTACAACTATAC+AGG - chr5_4:41723398-41723417 None:intergenic 35.0%
TTTATGTGAATGCAAACCGA+CGG + chr5_4:41723432-41723451 Msa0851460:intron 35.0%
! TAGTGTTTTGTGGAATACAC+AGG + chr5_4:41723693-41723712 Msa0851460:intron 35.0%
GTTAGGATCATATAACACCA+AGG - chr5_4:41724049-41724068 None:intergenic 35.0%
!!! CTTTTTTATAAGCCTAAGCC+TGG + chr5_4:41724202-41724221 Msa0851460:intron 35.0%
AATTTAATTAGGCCAGGCTT+AGG - chr5_4:41724217-41724236 None:intergenic 35.0%
!! GGATTTCGTTGTTGTTTGTT+GGG - chr5_4:41724551-41724570 None:intergenic 35.0%
CAACAAACAACAACGAAATC+CGG + chr5_4:41724550-41724569 Msa0851460:intron 35.0%
ATAAAAACGCGAGGGAAATA+AGG - chr5_4:41724591-41724610 None:intergenic 35.0%
! GAAGAAGTATAAAAACGCGA+GGG - chr5_4:41724599-41724618 None:intergenic 35.0%
! TGAAGAAGTATAAAAACGCG+AGG - chr5_4:41724600-41724619 None:intergenic 35.0%
AATCGCAGAGATTCTTAGTA+GGG - chr5_4:41724653-41724672 None:intergenic 35.0%
AAATCGCAGAGATTCTTAGT+AGG - chr5_4:41724654-41724673 None:intergenic 35.0%
AGAAAACGAGTCCATGTTAA+TGG + chr5_4:41724860-41724879 Msa0851460:CDS 35.0%
GAATAGGAATTGCAACATCT+CGG + chr5_4:41714491-41714510 Msa0851460:intron 35.0%
! CAAATCGATTTCAAACTCTG+AGG + chr5_4:41725016-41725035 Msa0851460:CDS 35.0%
ATCGATAAGTTGTTGAGGTT+TGG - chr5_4:41725111-41725130 None:intergenic 35.0%
AAAGAAGACTTCGAAAAGCT+AGG + chr5_4:41714839-41714858 Msa0851460:five_prime_UTR 35.0%
AAGAAGACTTCGAAAAGCTA+GGG + chr5_4:41714840-41714859 Msa0851460:five_prime_UTR 35.0%
TGAAAACAATACCCTTGCTA+CGG - chr5_4:41725403-41725422 None:intergenic 35.0%
AGAAAAAGGCGAATTGATCA+AGG - chr5_4:41725448-41725467 None:intergenic 35.0%
! AGTGAAATGGATTTCTGAGA+GGG - chr5_4:41725527-41725546 None:intergenic 35.0%
! AAGTGAAATGGATTTCTGAG+AGG - chr5_4:41725528-41725547 None:intergenic 35.0%
TCTCAGAAATCCATTTCACT+TGG + chr5_4:41725527-41725546 Msa0851460:CDS 35.0%
AACTTTCAAGCTCAGAAAGA+GGG + chr5_4:41725609-41725628 Msa0851460:CDS 35.0%
! CAAATGTTCTCTAAAGGTTG+AGG - chr5_4:41715250-41715269 None:intergenic 35.0%
! CTCAACCTTTAGAGAACATT+TGG + chr5_4:41715248-41715267 Msa0851460:CDS 35.0%
CAACTCCATCATCATCATCT+TGG + chr5_4:41714347-41714366 Msa0851460:five_prime_UTR 40.0%
! GCTTTCCAAGATGATGATGA+TGG - chr5_4:41714355-41714374 None:intergenic 40.0%
ATCATCTTGGAAAGCAGCTA+GGG + chr5_4:41714360-41714379 Msa0851460:five_prime_UTR 40.0%
TAGCAAAGGCAGTCATTCAT+TGG - chr5_4:41714455-41714474 None:intergenic 40.0%
!! GCTTCATTTGAGGTTGATGA+TGG + chr5_4:41714583-41714602 Msa0851460:five_prime_UTR 40.0%
!! TTTGAGGTTGATGATGGAAC+AGG + chr5_4:41714589-41714608 Msa0851460:five_prime_UTR 40.0%
ATCGATAGGTTGTTGAGGTT+TGG - chr5_4:41714647-41714666 None:intergenic 40.0%
GAAGAAAAGCGAAAGTTACC+TGG - chr5_4:41714742-41714761 None:intergenic 40.0%
TTTCTTCTTCTCCTCTGGTT+TGG + chr5_4:41714755-41714774 Msa0851460:intron 40.0%
GACCCCCAACTAAAATATTG+TGG - chr5_4:41715069-41715088 None:intergenic 40.0%
!! GAACTTTCAAGCTTTGAGAG+AGG + chr5_4:41715103-41715122 Msa0851460:CDS 40.0%
!! AGGTTTGCTGCTATCTGAAA+TGG - chr5_4:41715134-41715153 None:intergenic 40.0%
TGCTGGTCAGAAAACTTCAA+AGG - chr5_4:41715160-41715179 None:intergenic 40.0%
TCATCATTGAGAGGTTGTTG+AGG - chr5_4:41715316-41715335 None:intergenic 40.0%
TCAACAACCTCTCAATGATG+AGG + chr5_4:41715315-41715334 Msa0851460:CDS 40.0%
GAATCTGAATCCGATGACAA+TGG + chr5_4:41715427-41715446 Msa0851460:CDS 40.0%
! TGCACATGACTTTGAAGAGT+TGG + chr5_4:41715510-41715529 Msa0851460:intron 40.0%
ACATTCGCAAGTCAAAGTCA+TGG + chr5_4:41715813-41715832 Msa0851460:intron 40.0%
CATTCGCAAGTCAAAGTCAT+GGG + chr5_4:41715814-41715833 Msa0851460:intron 40.0%
!! GGTTGTTTCTGTTCTGAGAA+AGG + chr5_4:41715929-41715948 Msa0851460:intron 40.0%
!! GTGTTTAGATGGGTTGGTAT+TGG + chr5_4:41715973-41715992 Msa0851460:intron 40.0%
CCAGTGCCAAATGTACAAAA+AGG - chr5_4:41716018-41716037 None:intergenic 40.0%
! CCTTTTTGTACATTTGGCAC+TGG + chr5_4:41716015-41716034 Msa0851460:intron 40.0%
!! TTGTACATTTGGCACTGGTT+TGG + chr5_4:41716020-41716039 Msa0851460:intron 40.0%
!! TGTACATTTGGCACTGGTTT+GGG + chr5_4:41716021-41716040 Msa0851460:intron 40.0%
!! ACTGGTTTGGGTTATTCTGT+AGG + chr5_4:41716033-41716052 Msa0851460:intron 40.0%
! GTCCATGTCTTTTCTACGAA+TGG + chr5_4:41716161-41716180 Msa0851460:intron 40.0%
TTCAGTTTGTCTGCGGTATT+TGG + chr5_4:41716300-41716319 Msa0851460:intron 40.0%
ACTGTTTGTGCTAGTACAGA+TGG + chr5_4:41716382-41716401 Msa0851460:intron 40.0%
CTGTTTGTGCTAGTACAGAT+GGG + chr5_4:41716383-41716402 Msa0851460:intron 40.0%
!! GGTTGTTTCTGTTCTGAGAA+AGG + chr5_4:41715929-41715948 Msa0851460:intron 40.0%
!! GTGTTTAGATGGCTTGGTAT+TGG + chr5_4:41716487-41716506 Msa0851460:intron 40.0%
CTCGGTTGAAAAAGCTTAGA+AGG + chr5_4:41716561-41716580 Msa0851460:intron 40.0%
!! TGGTTAATTTGGCACTGGTT+TGG + chr5_4:41716590-41716609 Msa0851460:intron 40.0%
!! GGTTAATTTGGCACTGGTTT+GGG + chr5_4:41716591-41716610 Msa0851460:intron 40.0%
!! ACTGGTTTGGGTTATTCTGA+AGG + chr5_4:41716603-41716622 Msa0851460:intron 40.0%
! TATGGTGAGATAGTGGTACA+AGG + chr5_4:41716664-41716683 Msa0851460:intron 40.0%
! ATGGTGAGATAGTGGTACAA+GGG + chr5_4:41716665-41716684 Msa0851460:intron 40.0%
AAAGGTGACTTCGTTGTTGT+CGG + chr5_4:41716700-41716719 Msa0851460:intron 40.0%
TGCGGTATTTAGCTATTCTG+TGG + chr5_4:41716805-41716824 Msa0851460:intron 40.0%
AGCTATTCTGTGGTGTATTC+AGG + chr5_4:41716815-41716834 Msa0851460:intron 40.0%
ACTGTTTGTGCTAGTACAGA+TGG + chr5_4:41716382-41716401 Msa0851460:intron 40.0%
CTGTTTGTGCTAGTACAGAT+GGG + chr5_4:41716383-41716402 Msa0851460:intron 40.0%
!!! TTTCCGTGTTCTGTTTTAGC+AGG + chr5_4:41716969-41716988 Msa0851460:intron 40.0%
!!! TTCCGTGTTCTGTTTTAGCA+GGG + chr5_4:41716970-41716989 Msa0851460:intron 40.0%
!! GTTGTTTTCTTGTCGTAGGT+TGG + chr5_4:41717006-41717025 Msa0851460:intron 40.0%
! TGTTTTCTTGTCGTAGGTTG+GGG + chr5_4:41717008-41717027 Msa0851460:intron 40.0%
GTATGTGCATGTTGAACATG+AGG + chr5_4:41717236-41717255 Msa0851460:intron 40.0%
GGTTTGTCTTGTACTTGGAT+CGG - chr5_4:41717501-41717520 None:intergenic 40.0%
GATCCAAGTACAAGACAAAC+CGG + chr5_4:41717500-41717519 Msa0851460:intron 40.0%
! ATTCCGGTTTGTCTTGTACT+TGG - chr5_4:41717506-41717525 None:intergenic 40.0%
!!! AGGCTTTGTTTTTGGCTTTG+GGG - chr5_4:41717635-41717654 None:intergenic 40.0%
AAGAACAAAAAGCCACTCTG+CGG + chr5_4:41717768-41717787 Msa0851460:intron 40.0%
! GTCTTTGAGTGACGGTTTTT+CGG - chr5_4:41717809-41717828 None:intergenic 40.0%
!!! AGTTTTGGTTTTGAGCGATG+GGG - chr5_4:41717859-41717878 None:intergenic 40.0%
!!! CAGTTTTGGTTTTGAGCGAT+GGG - chr5_4:41717860-41717879 None:intergenic 40.0%
CACAACAGTGCAAACGAATT+TGG + chr5_4:41717881-41717900 Msa0851460:intron 40.0%
ATACAAACTGATGCAGCAGA+CGG + chr5_4:41717974-41717993 Msa0851460:intron 40.0%
TGTTTCAGAATTGTGAGGTG+CGG - chr5_4:41718090-41718109 None:intergenic 40.0%
! AAAGGAAAACTGGAGGGTTT+TGG - chr5_4:41718379-41718398 None:intergenic 40.0%
AATTTAAGGGAGAGCAACCA+GGG + chr5_4:41718648-41718667 Msa0851460:intron 40.0%
TAAATAATGTGTGGAGGGGA+GGG - chr5_4:41718686-41718705 None:intergenic 40.0%
TTAAATAATGTGTGGAGGGG+AGG - chr5_4:41718687-41718706 None:intergenic 40.0%
! ATGTTTGGTTCCACTTCTAG+AGG + chr5_4:41718953-41718972 Msa0851460:intron 40.0%
! TGTTTGGTTCCACTTCTAGA+GGG + chr5_4:41718954-41718973 Msa0851460:intron 40.0%
! AATTATGGTCCCTCTAGAAG+TGG - chr5_4:41718966-41718985 None:intergenic 40.0%
!!! GTATGACACTTTGTTTTCCG+GGG - chr5_4:41719712-41719731 None:intergenic 40.0%
TCAATACCCAAGCATAGAAG+AGG + chr5_4:41719756-41719775 Msa0851460:intron 40.0%
CAATACCCAAGCATAGAAGA+GGG + chr5_4:41719757-41719776 Msa0851460:intron 40.0%
TTGTGTATGGTTCCCAAAGA+TGG - chr5_4:41719791-41719810 None:intergenic 40.0%
AAGCAAAATCACACTCGCTT+TGG - chr5_4:41719839-41719858 None:intergenic 40.0%
TTTGGACTGAACGAAACAAC+AGG - chr5_4:41719905-41719924 None:intergenic 40.0%
! TTCTTTGCATTTGGCTGGTT+TGG - chr5_4:41719923-41719942 None:intergenic 40.0%
! TGCTTTGGCTTCTTTGCATT+TGG - chr5_4:41719932-41719951 None:intergenic 40.0%
CAACATATTAGGACCTGGAT+TGG - chr5_4:41720050-41720069 None:intergenic 40.0%
TATGGCAACATATTAGGACC+TGG - chr5_4:41720055-41720074 None:intergenic 40.0%
!!! GTGAGGTTTTTGGCTCTTTA+TGG - chr5_4:41720073-41720092 None:intergenic 40.0%
! TTTTTGCGCTGTGAGGTTTT+TGG - chr5_4:41720083-41720102 None:intergenic 40.0%
!!! TCATTTGTTTTTGCGCTGTG+AGG - chr5_4:41720090-41720109 None:intergenic 40.0%
CGAATTAGTATGGCACAAAC+AGG - chr5_4:41720252-41720271 None:intergenic 40.0%
TTGCAACGGACGAATTAGTA+TGG - chr5_4:41720262-41720281 None:intergenic 40.0%
! CTTTTCTACTCCTGTTGCAA+CGG - chr5_4:41720276-41720295 None:intergenic 40.0%
GTATAACCGCCTTGAATATC+CGG + chr5_4:41720332-41720351 Msa0851460:intron 40.0%
!! CAAGTTGGTAGAAGAGTGTA+GGG - chr5_4:41720414-41720433 None:intergenic 40.0%
!! ACAAGTTGGTAGAAGAGTGT+AGG - chr5_4:41720415-41720434 None:intergenic 40.0%
! AATGTTTTCTCTTGGTTGGG+AGG - chr5_4:41720486-41720505 None:intergenic 40.0%
! CGGAAATGTTTTCTCTTGGT+TGG - chr5_4:41720490-41720509 None:intergenic 40.0%
TCGCTTATTCGATTTAGCGA+CGG - chr5_4:41720531-41720550 None:intergenic 40.0%
GTGATATTCCTTTGCGTAGT+AGG - chr5_4:41720559-41720578 None:intergenic 40.0%
! TTTTGGTATGATAGGTGGGT+AGG - chr5_4:41720581-41720600 None:intergenic 40.0%
TTTAGTAGGGAGATATGGTG+AGG - chr5_4:41720750-41720769 None:intergenic 40.0%
!! AGGGTTTTAGTAGGGAGATA+TGG - chr5_4:41720755-41720774 None:intergenic 40.0%
!! TAGAGGTGGGTTTTGGTATA+GGG - chr5_4:41720774-41720793 None:intergenic 40.0%
!! ATAGAGGTGGGTTTTGGTAT+AGG - chr5_4:41720775-41720794 None:intergenic 40.0%
! TAAATGGTGTTGGAGGTTGT+TGG - chr5_4:41720801-41720820 None:intergenic 40.0%
ATTTAGCCCTGTTGGGTAAA+TGG - chr5_4:41720817-41720836 None:intergenic 40.0%
CAAAAGGAGTTAGGAGGTTT+GGG - chr5_4:41720863-41720882 None:intergenic 40.0%
ACAAAAGGAGTTAGGAGGTT+TGG - chr5_4:41720864-41720883 None:intergenic 40.0%
AGGATAACAGGAAAATTGCC+TGG - chr5_4:41720910-41720929 None:intergenic 40.0%
CCATTAAGTCTAGATTGTCG+GGG - chr5_4:41721090-41721109 None:intergenic 40.0%
GACTTAATGGTAGACACCAA+CGG + chr5_4:41721100-41721119 Msa0851460:intron 40.0%
TCTCAATTGGAGATGATCCT+CGG - chr5_4:41721144-41721163 None:intergenic 40.0%
TTGTATCTTGGCCTCTCAAT+TGG - chr5_4:41721157-41721176 None:intergenic 40.0%
GAGAGGCCAAGATACAAAAA+CGG + chr5_4:41721160-41721179 Msa0851460:intron 40.0%
TGAGGATTCGTGGTTAAATG+AGG - chr5_4:41721221-41721240 None:intergenic 40.0%
GTATCTCACTTACAGTTTGC+GGG - chr5_4:41721373-41721392 None:intergenic 40.0%
! TGGCGTTGGGACATATAATT+CGG - chr5_4:41721401-41721420 None:intergenic 40.0%
AAACGTTATGATGAAGGCAG+CGG - chr5_4:41721449-41721468 None:intergenic 40.0%
TGACGAGTTTCCATTACAAC+GGG - chr5_4:41721530-41721549 None:intergenic 40.0%
CTGACGAGTTTCCATTACAA+CGG - chr5_4:41721531-41721550 None:intergenic 40.0%
! TGTAATGGAAACTCGTCAGT+TGG + chr5_4:41721532-41721551 Msa0851460:intron 40.0%
! ACGGCTTCGATTCTAGTTAA+TGG - chr5_4:41721562-41721581 None:intergenic 40.0%
! ATCCATTTTCTCCACAACAC+CGG + chr5_4:41721604-41721623 Msa0851460:intron 40.0%
TATGCATAAAATGGCGTTCC+CGG - chr5_4:41721626-41721645 None:intergenic 40.0%
!! AGCTTATGATTCGGTGGATT+GGG - chr5_4:41721665-41721684 None:intergenic 40.0%
!! AAGCTTATGATTCGGTGGAT+TGG - chr5_4:41721666-41721685 None:intergenic 40.0%
ATACGGCCTTTGTGAAAGAT+AGG - chr5_4:41721783-41721802 None:intergenic 40.0%
! GTTAGCTAACAGGTTGAGAA+TGG - chr5_4:41721833-41721852 None:intergenic 40.0%
CAACCTGTTAGCTAACACTT+TGG + chr5_4:41721837-41721856 Msa0851460:intron 40.0%
! TGTCCAAAGTGTTAGCTAAC+AGG - chr5_4:41721843-41721862 None:intergenic 40.0%
AAACCAAGATTCACTCCATC+CGG + chr5_4:41722048-41722067 Msa0851460:intron 40.0%
TGTGACAGTTACAAAAGTCC+AGG - chr5_4:41722075-41722094 None:intergenic 40.0%
CTGAAGTAAAAGCGGCAATT+TGG - chr5_4:41722101-41722120 None:intergenic 40.0%
TTCGGAAGCTGAAGTAAAAG+CGG - chr5_4:41722109-41722128 None:intergenic 40.0%
TTATCTTATGTCGAAGGGAG+TGG - chr5_4:41722147-41722166 None:intergenic 40.0%
TTCTAATGTGTCTAGACTGG+GGG - chr5_4:41722193-41722212 None:intergenic 40.0%
CTTCTAATGTGTCTAGACTG+GGG - chr5_4:41722194-41722213 None:intergenic 40.0%
GCTTCTAATGTGTCTAGACT+GGG - chr5_4:41722195-41722214 None:intergenic 40.0%
ATGTTACAGAGGTTGCAACT+AGG + chr5_4:41722544-41722563 Msa0851460:intron 40.0%
TGTTACAGAGGTTGCAACTA+GGG + chr5_4:41722545-41722564 Msa0851460:intron 40.0%
GAGCTTTGCTTAAATAGGCT+AGG + chr5_4:41722586-41722605 Msa0851460:intron 40.0%
AAAAAACTAAGGCCTAAGCC+TGG + chr5_4:41722617-41722636 Msa0851460:intron 40.0%
!! ACCTGGCCTTTTTAAAAACC+TGG + chr5_4:41722674-41722693 Msa0851460:intron 40.0%
TTTAAACAGGGTAATAGGCC+AGG - chr5_4:41722700-41722719 None:intergenic 40.0%
! GCTTGCTACTAATATGCCTA+AGG - chr5_4:41722944-41722963 None:intergenic 40.0%
CGTGAACTATTACTATCCGT+CGG - chr5_4:41723451-41723470 None:intergenic 40.0%
GTAGCAATAGAGAAGTGATC+TGG + chr5_4:41723812-41723831 Msa0851460:intron 40.0%
TAATATACTCGTATACGGGC+CGG + chr5_4:41724161-41724180 Msa0851460:intron 40.0%
!! CTTACTTAGGAGTACCTGTT+TGG - chr5_4:41724373-41724392 None:intergenic 40.0%
!! CGGATTTCGTTGTTGTTTGT+TGG - chr5_4:41724552-41724571 None:intergenic 40.0%
GCAAGGTTTCTTCACGTTAA+AGG + chr5_4:41724621-41724640 Msa0851460:intron 40.0%
GGTTTCTTCACGTTAAAGGA+AGG + chr5_4:41724625-41724644 Msa0851460:intron 40.0%
! TTGGTGGTTGCATTAGGTTA+GGG - chr5_4:41724722-41724741 None:intergenic 40.0%
! ATTGGTGGTTGCATTAGGTT+AGG - chr5_4:41724723-41724742 None:intergenic 40.0%
! CGATAATTGGTGGTTGCATT+AGG - chr5_4:41724728-41724747 None:intergenic 40.0%
CAACTCCATCATCATCATCT+TGG + chr5_4:41714347-41714366 Msa0851460:five_prime_UTR 40.0%
! GGTTTCCAAGATGATGATGA+TGG - chr5_4:41724818-41724837 None:intergenic 40.0%
ATCATCTTGGAAACCAGCTA+GGG + chr5_4:41724823-41724842 Msa0851460:CDS 40.0%
!! AGCAAAGGCATTCCATTCAT+TGG - chr5_4:41724918-41724937 None:intergenic 40.0%
!! GCTTCATTTGAGGTTGATGA+AGG + chr5_4:41714583-41714602 Msa0851460:five_prime_UTR 40.0%
!! TTTGAGGTTGATGAAGGAAC+AGG + chr5_4:41725053-41725072 Msa0851460:CDS 40.0%
GATAAGTTGTTGAGGTTTGG+TGG - chr5_4:41725108-41725127 None:intergenic 40.0%
GGTGAATCGATAAGTTGTTG+AGG - chr5_4:41725116-41725135 None:intergenic 40.0%
GAAGAAAAGCGAAAGTTACC+TGG - chr5_4:41714742-41714761 None:intergenic 40.0%
TTTCTTCTTCTCCTCTGGAT+TGG + chr5_4:41725219-41725238 Msa0851460:intron 40.0%
ATATTTATTGGAGCAGGTGC+TGG + chr5_4:41725473-41725492 Msa0851460:intron 40.0%
TATTTATTGGAGCAGGTGCT+GGG + chr5_4:41725474-41725493 Msa0851460:intron 40.0%
CTTGCTTATGCCAAGTGAAA+TGG - chr5_4:41725540-41725559 None:intergenic 40.0%
!! TCTGACCAGAACGTTTTAGT+TGG + chr5_4:41725584-41725603 Msa0851460:CDS 40.0%
!!! CTGACCAGAACGTTTTAGTT+GGG + chr5_4:41725585-41725604 Msa0851460:CDS 40.0%
!!! TGACCAGAACGTTTTAGTTG+GGG + chr5_4:41725586-41725605 Msa0851460:CDS 40.0%
GAACTTTCAAGCTCAGAAAG+AGG + chr5_4:41725608-41725627 Msa0851460:CDS 40.0%
TCAGAAAACTTCGAAGGTTG+AGG - chr5_4:41725665-41725684 None:intergenic 40.0%
TGCTGATCAGAAAACTTCGA+AGG - chr5_4:41725671-41725690 None:intergenic 40.0%
!! AGGTTTGCTGCTACATGAAA+TGG - chr5_4:41725741-41725760 None:intergenic 40.0%
ATTGTCATCGGATTCGGATT+CGG - chr5_4:41725939-41725958 None:intergenic 40.0%
CATACCATTGTCATCGGATT+CGG - chr5_4:41715434-41715453 None:intergenic 40.0%
CATCATCTTGGAAAGCAGCT+AGG + chr5_4:41714359-41714378 Msa0851460:five_prime_UTR 45.0%
AACATCTCGGAAAGTTGCCA+GGG + chr5_4:41714504-41714523 Msa0851460:five_prime_UTR 45.0%
GGAAGAGAACGCTTCATTTG+AGG + chr5_4:41714573-41714592 Msa0851460:five_prime_UTR 45.0%
!! GGTGAACTGGATTTTGGAGA+GGG - chr5_4:41714619-41714638 None:intergenic 45.0%
!! AGGTGAACTGGATTTTGGAG+AGG - chr5_4:41714620-41714639 None:intergenic 45.0%
GATAGGTTGTTGAGGTTTGG+TGG - chr5_4:41714644-41714663 None:intergenic 45.0%
GGTGAATCGATAGGTTGTTG+AGG - chr5_4:41714652-41714671 None:intergenic 45.0%
TTAGATCGATCAGAAGGGAG+TGG - chr5_4:41714673-41714692 None:intergenic 45.0%
GAAAAGCGAAAGTTACCTGG+TGG - chr5_4:41714739-41714758 None:intergenic 45.0%
!! TCGCTTTTCTTCTTCTCCTC+TGG + chr5_4:41714750-41714769 Msa0851460:intron 45.0%
CAATACCTTTGCTACGGACT+CGG - chr5_4:41714879-41714898 None:intergenic 45.0%
!! TTTTTGATTGGAGCAGGTGC+TGG + chr5_4:41714998-41715017 Msa0851460:intron 45.0%
!! TTTTGATTGGAGCAGGTGCT+GGG + chr5_4:41714999-41715018 Msa0851460:intron 45.0%
ACGTTATAGCTGGTGGTCAA+CGG + chr5_4:41715182-41715201 Msa0851460:CDS 45.0%
GTCAACGGAGTAATGAGAGA+GGG + chr5_4:41715197-41715216 Msa0851460:intron 45.0%
TCAACGGAGTAATGAGAGAG+GGG + chr5_4:41715198-41715217 Msa0851460:intron 45.0%
AGAGGGGGAAAATCCATTTC+AGG + chr5_4:41715214-41715233 Msa0851460:intron 45.0%
!! AGGTTTGCTGCTACCTGAAA+TGG - chr5_4:41715230-41715249 None:intergenic 45.0%
GTGACAGGTGAACTGGATTT+GGG - chr5_4:41715289-41715308 None:intergenic 45.0%
AGTGACAGGTGAACTGGATT+TGG - chr5_4:41715290-41715309 None:intergenic 45.0%
ACAACCTCTCAATGATGAGG+AGG + chr5_4:41715318-41715337 Msa0851460:CDS 45.0%
AAGTCCTCCTCATCATTGAG+AGG - chr5_4:41715325-41715344 None:intergenic 45.0%
GCACTGCATACCATTGTCAT+CGG - chr5_4:41715440-41715459 None:intergenic 45.0%
GATGACAAGTGGACGATAGT+AGG - chr5_4:41715582-41715601 None:intergenic 45.0%
! TGTGGCCATTGGTGTTTAGA+TGG + chr5_4:41715962-41715981 Msa0851460:intron 45.0%
! GTGGCCATTGGTGTTTAGAT+GGG + chr5_4:41715963-41715982 Msa0851460:intron 45.0%
CCAACCCATCTAAACACCAA+TGG - chr5_4:41715970-41715989 None:intergenic 45.0%
! CCATTGGTGTTTAGATGGGT+TGG + chr5_4:41715967-41715986 Msa0851460:intron 45.0%
TAAAGGTAGTGCCTTGGAAG+TGG + chr5_4:41716116-41716135 Msa0851460:intron 45.0%
! TACGAATGGTATTGGGATCG+TGG + chr5_4:41716175-41716194 Msa0851460:intron 45.0%
AGACAAAAGGTGACCTCGTT+GGG + chr5_4:41716211-41716230 Msa0851460:intron 45.0%
CACACAGAAAAAACCCAACG+AGG - chr5_4:41716227-41716246 None:intergenic 45.0%
TGCGGTATTTGGCTATTCTG+TGG + chr5_4:41716311-41716330 Msa0851460:intron 45.0%
! TGTGGTCGTTGGTGTTTAGA+TGG + chr5_4:41716476-41716495 Msa0851460:intron 45.0%
! TCGTTGGTGTTTAGATGGCT+TGG + chr5_4:41716481-41716500 Msa0851460:intron 45.0%
!!! TGAGTTTTATAGGGGCGTCT+CGG + chr5_4:41716543-41716562 Msa0851460:intron 45.0%
AAGGTGACTTCGTTGTTGTC+GGG + chr5_4:41716701-41716720 Msa0851460:intron 45.0%
TCTGTGGTGTATTCAGGTGA+AGG + chr5_4:41716821-41716840 Msa0851460:intron 45.0%
!!! TCCGTGTTCTGTTTTAGCAG+GGG + chr5_4:41716971-41716990 Msa0851460:intron 45.0%
!! TTCAGGGGTACTACGCATAT+AGG + chr5_4:41717072-41717091 Msa0851460:intron 45.0%
AGTCTACACAAGACACGCAA+AGG - chr5_4:41717127-41717146 None:intergenic 45.0%
TTGCGTGTCTTGTGTAGACT+TGG + chr5_4:41717127-41717146 Msa0851460:intron 45.0%
! TGTTCTGTTTCAAGTGAGGG+TGG - chr5_4:41717599-41717618 None:intergenic 45.0%
!! GGCTGCTATATTTGGTGCTA+CGG - chr5_4:41717731-41717750 None:intergenic 45.0%
CCAGGTTTGTCTTTGAGTGA+CGG - chr5_4:41717817-41717836 None:intergenic 45.0%
!!! TGGTCTTTGTTGGTTTTGCC+AGG - chr5_4:41717835-41717854 None:intergenic 45.0%
!!! CCAGTTTTGGTTTTGAGCGA+TGG - chr5_4:41717861-41717880 None:intergenic 45.0%
CCATCGCTCAAAACCAAAAC+TGG + chr5_4:41717858-41717877 Msa0851460:intron 45.0%
! TTGCACTGTTGTGCCAGTTT+TGG - chr5_4:41717874-41717893 None:intergenic 45.0%
! CAAACGAATTTGGAGTGACC+AGG + chr5_4:41717891-41717910 Msa0851460:intron 45.0%
GTGACCAGGACAATAAACCA+AGG + chr5_4:41717905-41717924 Msa0851460:intron 45.0%
AGACGGAAGAAACAAACAGC+AGG + chr5_4:41717991-41718010 Msa0851460:intron 45.0%
GAATTTAAGGGAGAGCAACC+AGG + chr5_4:41718647-41718666 Msa0851460:intron 45.0%
ATTTAAGGGAGAGCAACCAG+GGG + chr5_4:41718649-41718668 Msa0851460:intron 45.0%
AAAGTTCGGGGTTTAAACCC+CGG - chr5_4:41718875-41718894 None:intergenic 45.0%
! TGAGCTTAGCTCAGTTGGTA+TGG - chr5_4:41718916-41718935 None:intergenic 45.0%
GGTGCTAACTCGTTAGTACA+AGG + chr5_4:41719670-41719689 Msa0851460:intron 45.0%
GTGTACTAAGAGAAACACCC+CGG + chr5_4:41719692-41719711 Msa0851460:intron 45.0%
TGTATGGTTCCCAAAGATGG+TGG - chr5_4:41719788-41719807 None:intergenic 45.0%
CAAAATCACACTCGCTTTGG+TGG - chr5_4:41719836-41719855 None:intergenic 45.0%
TTGGCTTCTTTGCATTTGGC+TGG - chr5_4:41719928-41719947 None:intergenic 45.0%
!! CTTGGTGTTTGTTGAAGGAC+AGG - chr5_4:41720205-41720224 None:intergenic 45.0%
! TCCTTTGAAGGTTTCCATCG+TGG - chr5_4:41720228-41720247 None:intergenic 45.0%
GCACAAACAGGTTCCTTTGA+AGG - chr5_4:41720240-41720259 None:intergenic 45.0%
ACTAATTCGTCCGTTGCAAC+AGG + chr5_4:41720263-41720282 Msa0851460:intron 45.0%
CAAGGCGGTTATACAGTGAA+AGG - chr5_4:41720326-41720345 None:intergenic 45.0%
! TTTTCTCTTGGTTGGGAGGT+AGG - chr5_4:41720482-41720501 None:intergenic 45.0%
!! GTGGCGGAAATGTTTTCTCT+TGG - chr5_4:41720494-41720513 None:intergenic 45.0%
ATAGCGTGGGTGATGTAGAA+GGG - chr5_4:41720658-41720677 None:intergenic 45.0%
GAGTGTTTCTCATTGGTGGA+GGG - chr5_4:41720699-41720718 None:intergenic 45.0%
TCCACCAATGAGAAACACTC+CGG + chr5_4:41720699-41720718 Msa0851460:intron 45.0%
! TGTTGGGTAAATGGTGTTGG+AGG - chr5_4:41720808-41720827 None:intergenic 45.0%
TCCAACACCATTTACCCAAC+AGG + chr5_4:41720807-41720826 Msa0851460:intron 45.0%
CCAACACCATTTACCCAACA+GGG + chr5_4:41720808-41720827 Msa0851460:intron 45.0%
AATAGAGCTCCAAGCAATCC+AGG + chr5_4:41720889-41720908 Msa0851460:intron 45.0%
GGAAAATTGCCTGGATTGCT+TGG - chr5_4:41720901-41720920 None:intergenic 45.0%
!! ACCTGACGGAGCTTTGAAAA+AGG + chr5_4:41720982-41721001 Msa0851460:intron 45.0%
!!! TCCTTTTTCAAAGCTCCGTC+AGG - chr5_4:41720986-41721005 None:intergenic 45.0%
TTAAGTCTAGATTGTCGGGG+TGG - chr5_4:41721087-41721106 None:intergenic 45.0%
CCCCGACAATCTAGACTTAA+TGG + chr5_4:41721087-41721106 Msa0851460:intron 45.0%
GAGGATCATCTCCAATTGAG+AGG + chr5_4:41721143-41721162 Msa0851460:intron 45.0%
GGATTCGTGGTTAAATGAGG+CGG - chr5_4:41721218-41721237 None:intergenic 45.0%
! ACTTTGTTTGCGGATACGTC+TGG - chr5_4:41721289-41721308 None:intergenic 45.0%
!! GGGTGACACTTTGCTTTTAG+GGG - chr5_4:41721353-41721372 None:intergenic 45.0%
!! CGGGTGACACTTTGCTTTTA+GGG - chr5_4:41721354-41721373 None:intergenic 45.0%
GACGAGTTTCCATTACAACG+GGG - chr5_4:41721529-41721548 None:intergenic 45.0%
AACTAGAATCGAAGCCGTTG+CGG + chr5_4:41721564-41721583 Msa0851460:intron 45.0%
AGAATGTGTTAGCACCGCAA+CGG - chr5_4:41721581-41721600 None:intergenic 45.0%
! TCCATTTTCTCCACAACACC+GGG + chr5_4:41721605-41721624 Msa0851460:intron 45.0%
GGACGCGGTTATGCATAAAA+TGG - chr5_4:41721635-41721654 None:intergenic 45.0%
!! CTTATGATTCGGTGGATTGG+GGG - chr5_4:41721663-41721682 None:intergenic 45.0%
!! GCTTATGATTCGGTGGATTG+GGG - chr5_4:41721664-41721683 None:intergenic 45.0%
! TGCAAATGAGGTGGTTGATG+AGG - chr5_4:41721737-41721756 None:intergenic 45.0%
CGCAACGGCAAATTATCAAG+AGG - chr5_4:41721967-41721986 None:intergenic 45.0%
CAGTTACAAAAGTCCAGGTC+CGG - chr5_4:41722070-41722089 None:intergenic 45.0%
GGCTTCTAATGTGTCTAGAC+TGG - chr5_4:41722196-41722215 None:intergenic 45.0%
GTGGACGGTAACATTGTTGA+TGG - chr5_4:41722270-41722289 None:intergenic 45.0%
TTCTTGCTAGTCGTAGAAGG+CGG - chr5_4:41722314-41722333 None:intergenic 45.0%
GTTACAGAGGTTGCAACTAG+GGG + chr5_4:41722546-41722565 Msa0851460:intron 45.0%
TATTTAAGCAAAGCTCGGCC+CGG - chr5_4:41722582-41722601 None:intergenic 45.0%
!! GCCAGGTTTTTAAAAAGGCC+AGG - chr5_4:41722678-41722697 None:intergenic 45.0%
!! GCCTTTTTAAAAACCTGGCC+TGG + chr5_4:41722679-41722698 Msa0851460:intron 45.0%
!! GCCAGGCCAGGTTTTTAAAA+AGG - chr5_4:41722683-41722702 None:intergenic 45.0%
GTTAGGATCAAATGGCACCA+AGG + chr5_4:41723107-41723126 Msa0851460:intron 45.0%
TCTCTTCCGTCCATCACTTA+TGG + chr5_4:41723331-41723350 Msa0851460:intron 45.0%
AAAAGCCTATCAAGCCTACC+AGG - chr5_4:41724187-41724206 None:intergenic 45.0%
TTGGTTGCACGTTGCAACTA+GGG - chr5_4:41724354-41724373 None:intergenic 45.0%
TTTGGTTGCACGTTGCAACT+AGG - chr5_4:41724355-41724374 None:intergenic 45.0%
! CTTTTCTTCTCGATGTCACC+AGG + chr5_4:41724674-41724693 Msa0851460:intron 45.0%
CATCATCTTGGAAACCAGCT+AGG + chr5_4:41724822-41724841 Msa0851460:CDS 45.0%
AACATCTCGGAAAGTTGCCA+GGG + chr5_4:41714504-41714523 Msa0851460:five_prime_UTR 45.0%
GGAAGAGAACGCTTCATTTG+AGG + chr5_4:41714573-41714592 Msa0851460:five_prime_UTR 45.0%
!! GGTGAACTGGATTTTGGAGA+TGG - chr5_4:41714619-41714638 None:intergenic 45.0%
TTAGATCGATCAGAAGGGAG+TGG - chr5_4:41714673-41714692 None:intergenic 45.0%
GAAAAGCGAAAGTTACCTGG+TGG - chr5_4:41714739-41714758 None:intergenic 45.0%
!! TCGCTTTTCTTCTTCTCCTC+TGG + chr5_4:41714750-41714769 Msa0851460:intron 45.0%
AGACTTCGAAAAGCTAGGGT+TGG + chr5_4:41725299-41725318 Msa0851460:CDS 45.0%
GACTTCGAAAAGCTAGGGTT+GGG + chr5_4:41725300-41725319 Msa0851460:CDS 45.0%
ACTTCGAAAAGCTAGGGTTG+GGG + chr5_4:41725301-41725320 Msa0851460:CDS 45.0%
! GCTGGGAAATCTAGTGTTGA+AGG + chr5_4:41725491-41725510 Msa0851460:CDS 45.0%
TCAGAGCTTGACATGTTGTC+AGG - chr5_4:41725569-41725588 None:intergenic 45.0%
GTTCCCCAACTAAAACGTTC+TGG - chr5_4:41725592-41725611 None:intergenic 45.0%
TTTCAAGCTCAGAAAGAGGG+AGG + chr5_4:41725612-41725631 Msa0851460:CDS 45.0%
TTTGCTGCTACCTGCTGAAA+TGG - chr5_4:41725642-41725661 None:intergenic 45.0%
GATCAGCAGAACGTTATAGC+TGG + chr5_4:41725683-41725702 Msa0851460:CDS 45.0%
ACGTTATAGCTGGTGGTCAA+CGG + chr5_4:41715182-41715201 Msa0851460:CDS 45.0%
GTCAACGGAGTAATGAGAGA+GGG + chr5_4:41715197-41715216 Msa0851460:intron 45.0%
TCAACGGAGTAATGAGAGAG+GGG + chr5_4:41715198-41715217 Msa0851460:intron 45.0%
GTGACAGGTGAACTGGATTT+GGG - chr5_4:41715289-41715308 None:intergenic 45.0%
AGTGACAGGTGAACTGGATT+TGG - chr5_4:41715290-41715309 None:intergenic 45.0%
TCATCACTGAGAGGTTGTTG+AGG - chr5_4:41725827-41725846 None:intergenic 45.0%
TCAACAACCTCTCAGTGATG+AGG + chr5_4:41725826-41725845 Msa0851460:CDS 45.0%
GAATCCGAATCCGATGACAA+TGG + chr5_4:41725938-41725957 Msa0851460:CDS 45.0%
GCACTGCATACCATTGTCAT+CGG - chr5_4:41715440-41715459 None:intergenic 45.0%
TGCACATGACTATGCTGAGT+TGG + chr5_4:41726021-41726040 Msa0851460:CDS 45.0%
!!! TTTTTTTTTTTTTTTTTTTG+TGG + chr5_4:41718846-41718865 Msa0851460:intron 5.0%
!!! TAATAGAAAATAATATATTT+TGG + chr5_4:41719440-41719459 Msa0851460:intron 5.0%
!!! TTATTTTTATGTTATTATTA+CGG - chr5_4:41719518-41719537 None:intergenic 5.0%
!!! TATTTTTATTAAACTTTTTT+GGG - chr5_4:41720942-41720961 None:intergenic 5.0%
!! ATATATATTGAAAAAAATTT+AGG - chr5_4:41724473-41724492 None:intergenic 5.0%
CTTGGAAAGCAGCTAGGGTT+CGG + chr5_4:41714365-41714384 Msa0851460:five_prime_UTR 50.0%
TTGGAAAGCAGCTAGGGTTC+GGG + chr5_4:41714366-41714385 Msa0851460:five_prime_UTR 50.0%
CAACATCTCGGAAAGTTGCC+AGG + chr5_4:41714503-41714522 Msa0851460:five_prime_UTR 50.0%
TCTTCCTCTTCCTTCAACCC+TGG - chr5_4:41714524-41714543 None:intergenic 50.0%
! GTGGCAGGTGAACTGGATTT+TGG - chr5_4:41714625-41714644 None:intergenic 50.0%
GAAGGGAGTGGTGAATCGAT+AGG - chr5_4:41714661-41714680 None:intergenic 50.0%
GAAAGTTACCTGGTGGAGAG+TGG - chr5_4:41714732-41714751 None:intergenic 50.0%
!! AGCAGGTGCTGGGAAATCTA+GGG + chr5_4:41715009-41715028 Msa0851460:intron 50.0%
TTGGGGGTCAAGGGAGTAAT+TGG + chr5_4:41715080-41715099 Msa0851460:CDS 50.0%
TGGGGGTCAAGGGAGTAATT+GGG + chr5_4:41715081-41715100 Msa0851460:CDS 50.0%
GACCAGCAGAACGTTATAGC+TGG + chr5_4:41715172-41715191 Msa0851460:CDS 50.0%
CACCAGCTATAACGTTCTGC+TGG - chr5_4:41715177-41715196 None:intergenic 50.0%
CAGCAGAACGTTATAGCTGG+TGG + chr5_4:41715175-41715194 Msa0851460:CDS 50.0%
GGTCAACGGAGTAATGAGAG+AGG + chr5_4:41715196-41715215 Msa0851460:intron 50.0%
CAACGGAGTAATGAGAGAGG+GGG + chr5_4:41715199-41715218 Msa0851460:intron 50.0%
AGGTGAACTGGATTTGGGAG+AGG - chr5_4:41715284-41715303 None:intergenic 50.0%
AGGTTCAGTGACAGGTGAAC+TGG - chr5_4:41715296-41715315 None:intergenic 50.0%
GGTTGTTGAGGTTCAGTGAC+AGG - chr5_4:41715304-41715323 None:intergenic 50.0%
CACCAATGGCCACACTCTAA+GGG - chr5_4:41715956-41715975 None:intergenic 50.0%
ACACCAATGGCCACACTCTA+AGG - chr5_4:41715957-41715976 None:intergenic 50.0%
! ACATGGACTCCCTTTTAGCC+GGG - chr5_4:41716149-41716168 None:intergenic 50.0%
! GACATGGACTCCCTTTTAGC+CGG - chr5_4:41716150-41716169 None:intergenic 50.0%
GAGACAAAAGGTGACCTCGT+TGG + chr5_4:41716210-41716229 Msa0851460:intron 50.0%
GGCTATTCTGTGGCGTATTC+AGG + chr5_4:41716321-41716340 Msa0851460:intron 50.0%
TCTGTGGCGTATTCAGGTGA+AGG + chr5_4:41716327-41716346 Msa0851460:intron 50.0%
CACCAACGACCACACTCTAA+GGG - chr5_4:41716470-41716489 None:intergenic 50.0%
ACACCAACGACCACACTCTA+AGG - chr5_4:41716471-41716490 None:intergenic 50.0%
! GAGATAGTGGTACAAGGGAG+AGG + chr5_4:41716670-41716689 Msa0851460:intron 50.0%
CAAGGGAGAGGCTTCATCAA+AGG + chr5_4:41716682-41716701 Msa0851460:intron 50.0%
AGGTGACTTCGTTGTTGTCG+GGG + chr5_4:41716702-41716721 Msa0851460:intron 50.0%
! TTCCTTCCCCTTGCGTTTTG+CGG + chr5_4:41716910-41716929 Msa0851460:intron 50.0%
GCCCCTGCTAAAACAGAACA+CGG - chr5_4:41716975-41716994 None:intergenic 50.0%
CCGTCACTCAAAGACAAACC+TGG + chr5_4:41717814-41717833 Msa0851460:intron 50.0%
!!! TTGGTTTTGAGCGATGGGGT+TGG - chr5_4:41717855-41717874 None:intergenic 50.0%
GCTGCCTTGGTTTATTGTCC+TGG - chr5_4:41717912-41717931 None:intergenic 50.0%
! GTTTTTGCGTTCTGCTGCCT+TGG - chr5_4:41717925-41717944 None:intergenic 50.0%
TTCAGAATTGTGAGGTGCGG+AGG - chr5_4:41718087-41718106 None:intergenic 50.0%
TCTCGTGAGCTTAGCTCAGT+TGG - chr5_4:41718921-41718940 None:intergenic 50.0%
TCGGACCCTCTTCTATGCTT+GGG - chr5_4:41719765-41719784 None:intergenic 50.0%
! TGGTTCCCAAAGATGGTGGT+CGG - chr5_4:41719784-41719803 None:intergenic 50.0%
!! CGTGGCTTGGTGTTTGTTGA+AGG - chr5_4:41720210-41720229 None:intergenic 50.0%
CAACAAACACCAAGCCACGA+TGG + chr5_4:41720211-41720230 Msa0851460:intron 50.0%
TGAAGGTTTCCATCGTGGCT+TGG - chr5_4:41720223-41720242 None:intergenic 50.0%
GCCACGATGGAAACCTTCAA+AGG + chr5_4:41720224-41720243 Msa0851460:intron 50.0%
TGGGATCCGGATATTCAAGG+CGG - chr5_4:41720341-41720360 None:intergenic 50.0%
CAGTGGGATCCGGATATTCA+AGG - chr5_4:41720344-41720363 None:intergenic 50.0%
! TGTTTCTGACAGGTGGCAGT+GGG - chr5_4:41720360-41720379 None:intergenic 50.0%
! ATGTTTCTGACAGGTGGCAG+TGG - chr5_4:41720361-41720380 None:intergenic 50.0%
GAGTTGGCAGAGACGTTTGT+GGG - chr5_4:41720447-41720466 None:intergenic 50.0%
! TAGGTGGTGATGCTTGGAGT+TGG - chr5_4:41720463-41720482 None:intergenic 50.0%
AGCGACGGATAAGCTGATCA+CGG - chr5_4:41720516-41720535 None:intergenic 50.0%
CGAGCAAACCTACTACGCAA+AGG + chr5_4:41720548-41720567 Msa0851460:intron 50.0%
!! GTTTGCTGAGAGGGTGTCAA+GGG - chr5_4:41720630-41720649 None:intergenic 50.0%
TAGCGTGGGTGATGTAGAAG+GGG - chr5_4:41720657-41720676 None:intergenic 50.0%
GATAGCGTGGGTGATGTAGA+AGG - chr5_4:41720659-41720678 None:intergenic 50.0%
GCGAAGATTAGGGATAGCGT+GGG - chr5_4:41720671-41720690 None:intergenic 50.0%
AGCGAAGATTAGGGATAGCG+TGG - chr5_4:41720672-41720691 None:intergenic 50.0%
GAGGGAGGTAGCGAAGATTA+GGG - chr5_4:41720681-41720700 None:intergenic 50.0%
TGTTTCTCATTGGTGGAGGG+AGG - chr5_4:41720696-41720715 None:intergenic 50.0%
! GGAGTGTTTCTCATTGGTGG+AGG - chr5_4:41720700-41720719 None:intergenic 50.0%
AGTAGGGAGATATGGTGAGG+AGG - chr5_4:41720747-41720766 None:intergenic 50.0%
!! TGGTGGATAGAGGTGGGTTT+TGG - chr5_4:41720781-41720800 None:intergenic 50.0%
! GGTTGTTGGTGGATAGAGGT+GGG - chr5_4:41720787-41720806 None:intergenic 50.0%
! AGGTTGTTGGTGGATAGAGG+TGG - chr5_4:41720788-41720807 None:intergenic 50.0%
! TGGAGGTTGTTGGTGGATAG+AGG - chr5_4:41720791-41720810 None:intergenic 50.0%
! ATGGTGTTGGAGGTTGTTGG+TGG - chr5_4:41720798-41720817 None:intergenic 50.0%
CCCTGTTGGGTAAATGGTGT+TGG - chr5_4:41720811-41720830 None:intergenic 50.0%
AGTTAGGAGGTTTGGGTGTG+AGG - chr5_4:41720856-41720875 None:intergenic 50.0%
!!! ACTTTTTTGGGGAGGGAGTG+AGG - chr5_4:41720930-41720949 None:intergenic 50.0%
CATAGACAGGAAGCGAAGTC+AGG + chr5_4:41721011-41721030 Msa0851460:intron 50.0%
! TCCTCGGAAGTTGGCGTTTT+GGG - chr5_4:41721128-41721147 None:intergenic 50.0%
! ATCCTCGGAAGTTGGCGTTT+TGG - chr5_4:41721129-41721148 None:intergenic 50.0%
TGGAGATGATCCTCGGAAGT+TGG - chr5_4:41721137-41721156 None:intergenic 50.0%
! TGCGGATACGTCTGGCTTAA+GGG - chr5_4:41721281-41721300 None:intergenic 50.0%
! TTGCGGATACGTCTGGCTTA+AGG - chr5_4:41721282-41721301 None:intergenic 50.0%
!! GGCGGTGTTGACTTTGTTTG+CGG - chr5_4:41721299-41721318 None:intergenic 50.0%
TAATGTCCGAGCTTTACGGG+CGG - chr5_4:41721317-41721336 None:intergenic 50.0%
GGCTAATGTCCGAGCTTTAC+GGG - chr5_4:41721320-41721339 None:intergenic 50.0%
GGGCTAATGTCCGAGCTTTA+CGG - chr5_4:41721321-41721340 None:intergenic 50.0%
!! GCGGGTGACACTTTGCTTTT+AGG - chr5_4:41721355-41721374 None:intergenic 50.0%
!! TCCCGGTGTTGTGGAGAAAA+TGG - chr5_4:41721609-41721628 None:intergenic 50.0%
! CTCTGGGGACTGTCAATCTT+CGG + chr5_4:41721913-41721932 Msa0851460:intron 50.0%
TCTGGGGACTGTCAATCTTC+GGG + chr5_4:41721914-41721933 Msa0851460:intron 50.0%
TACAAAAGTCCAGGTCCGGA+TGG - chr5_4:41722066-41722085 None:intergenic 50.0%
AATGTGTCTAGACTGGGGGT+TGG - chr5_4:41722189-41722208 None:intergenic 50.0%
CGGTTCTTGCTAGTCGTAGA+AGG - chr5_4:41722317-41722336 None:intergenic 50.0%
TACGACTAGCAAGAACCGAG+TGG + chr5_4:41722319-41722338 Msa0851460:intron 50.0%
! GTCACGGCTTCATTGGTTGA+GGG - chr5_4:41722370-41722389 None:intergenic 50.0%
! AGTCACGGCTTCATTGGTTG+AGG - chr5_4:41722371-41722390 None:intergenic 50.0%
CTATGCAGTCACGGCTTCAT+TGG - chr5_4:41722377-41722396 None:intergenic 50.0%
GGGCCGAGCTTTGCTTAAAT+AGG + chr5_4:41722581-41722600 Msa0851460:intron 50.0%
ACAGGTAAAAGGCCAGGCTT+AGG - chr5_4:41722632-41722651 None:intergenic 50.0%
CCTTTGACAGGTAAAAGGCC+AGG - chr5_4:41722638-41722657 None:intergenic 50.0%
!! CCTGGCCTTTTACCTGTCAA+AGG + chr5_4:41722635-41722654 Msa0851460:intron 50.0%
CTTGTAGTAGACCGAGCCAT+AGG + chr5_4:41724298-41724317 Msa0851460:intron 50.0%
TTGCAACTAGGGGTGGGAAT+AGG - chr5_4:41722556-41722575 None:intergenic 50.0%
TGGTTGCACGTTGCAACTAG+GGG - chr5_4:41724353-41724372 None:intergenic 50.0%
GTTGCAACGTGCAACCAAAC+AGG + chr5_4:41724356-41724375 Msa0851460:intron 50.0%
CTTGGAAACCAGCTAGGGTT+CGG + chr5_4:41724828-41724847 Msa0851460:CDS 50.0%
TTGGAAACCAGCTAGGGTTC+GGG + chr5_4:41724829-41724848 Msa0851460:CDS 50.0%
CAACATCTCGGAAAGTTGCC+AGG + chr5_4:41714503-41714522 Msa0851460:five_prime_UTR 50.0%
TCTTCCTCTTCCTTCAACCC+TGG - chr5_4:41714524-41714543 None:intergenic 50.0%
! GTGGCAGGTGAACTGGATTT+TGG - chr5_4:41714625-41714644 None:intergenic 50.0%
!! AGTTGTTGAGGTTTGGTGGC+AGG - chr5_4:41725104-41725123 None:intergenic 50.0%
GAAAGTTACCTGGTGGAGAC+TGG - chr5_4:41725196-41725215 None:intergenic 50.0%
CTTCGAAAAGCTAGGGTTGG+GGG + chr5_4:41725302-41725321 Msa0851460:CDS 50.0%
CAATACCCTTGCTACGGACT+CGG - chr5_4:41725397-41725416 None:intergenic 50.0%
GGGAGGAAATCCATTTCAGC+AGG + chr5_4:41725629-41725648 Msa0851460:CDS 50.0%
CAGCAGAACGTTATAGCTGG+TGG + chr5_4:41715175-41715194 Msa0851460:CDS 50.0%
GGTCAACGGAGTAATGAGAG+AGG + chr5_4:41715196-41715215 Msa0851460:intron 50.0%
CAACGGAGTAATGAGAGAGG+GGG + chr5_4:41715199-41715218 Msa0851460:intron 50.0%
AGGTGAACTGGATTTGGGAG+AGG - chr5_4:41715284-41715303 None:intergenic 50.0%
AGGTTCAGTGACAGGTGAAC+TGG - chr5_4:41715296-41715315 None:intergenic 50.0%
GGTTGTTGAGGTTCAGTGAC+AGG - chr5_4:41715304-41715323 None:intergenic 50.0%
ACAACCTCTCAGTGATGAGG+AGG + chr5_4:41725829-41725848 Msa0851460:CDS 50.0%
AAGTCCTCCTCATCACTGAG+AGG - chr5_4:41725836-41725855 None:intergenic 50.0%
CGGAAAGTTGCCAGGGTTGA+AGG + chr5_4:41714511-41714530 Msa0851460:five_prime_UTR 55.0%
GTTGCCAGGGTTGAAGGAAG+AGG + chr5_4:41714517-41714536 Msa0851460:five_prime_UTR 55.0%
!! AGGTTTGGTGGCAGGTGAAC+TGG - chr5_4:41714632-41714651 None:intergenic 55.0%
!! GGTTGTTGAGGTTTGGTGGC+AGG - chr5_4:41714640-41714659 None:intergenic 55.0%
!! GAGCAGGTGCTGGGAAATCT+AGG + chr5_4:41715008-41715027 Msa0851460:intron 55.0%
GAGAAAGGGCCCTTAGAGTG+TGG + chr5_4:41715944-41715963 Msa0851460:intron 55.0%
CTTGGAAGTGGAATCTCGCC+CGG + chr5_4:41716128-41716147 Msa0851460:intron 55.0%
TGGAATCTCGCCCGGCTAAA+AGG + chr5_4:41716136-41716155 Msa0851460:intron 55.0%
GGAATCTCGCCCGGCTAAAA+GGG + chr5_4:41716137-41716156 Msa0851460:intron 55.0%
GAGAAAGGGCCCTTAGAGTG+TGG + chr5_4:41715944-41715963 Msa0851460:intron 55.0%
GGTGACTTCGTTGTTGTCGG+GGG + chr5_4:41716703-41716722 Msa0851460:intron 55.0%
TTCCGCAAAACGCAAGGGGA+AGG - chr5_4:41716915-41716934 None:intergenic 55.0%
CAGGTTCCGCAAAACGCAAG+GGG - chr5_4:41716919-41716938 None:intergenic 55.0%
GCAGGTTCCGCAAAACGCAA+GGG - chr5_4:41716920-41716939 None:intergenic 55.0%
AGCAGGTTCCGCAAAACGCA+AGG - chr5_4:41716921-41716940 None:intergenic 55.0%
! CGGAACCTGCTGCTGTTTGT+GGG + chr5_4:41716930-41716949 Msa0851460:intron 55.0%
! GGAACCTGCTGCTGTTTGTG+GGG + chr5_4:41716931-41716950 Msa0851460:intron 55.0%
ACTTCCCCACAAACAGCAGC+AGG - chr5_4:41716938-41716957 None:intergenic 55.0%
! AGACACGCAAAGGCTAGCTG+AGG - chr5_4:41717117-41717136 None:intergenic 55.0%
! GCAGATTTTGTGCCGCAGAG+TGG - chr5_4:41717783-41717802 None:intergenic 55.0%
!! GCGATGGGGTTGGTCTTTGT+TGG - chr5_4:41717845-41717864 None:intergenic 55.0%
TAATGTGTGGAGGGGAGGGA+GGG - chr5_4:41718682-41718701 None:intergenic 55.0%
ATAATGTGTGGAGGGGAGGG+AGG - chr5_4:41718683-41718702 None:intergenic 55.0%
GTCGGACCCTCTTCTATGCT+TGG - chr5_4:41719766-41719785 None:intergenic 55.0%
AGGGTCCGACCACCATCTTT+GGG + chr5_4:41719776-41719795 Msa0851460:intron 55.0%
AGCTCCTGACACACCAATCC+AGG + chr5_4:41720034-41720053 Msa0851460:intron 55.0%
!! AGGACCTGGATTGGTGTGTC+AGG - chr5_4:41720041-41720060 None:intergenic 55.0%
! ACTACGTGTGTAGTGGGGTG+CGG - chr5_4:41720131-41720150 None:intergenic 55.0%
CGGCTACTACGTGTGTAGTG+GGG - chr5_4:41720136-41720155 None:intergenic 55.0%
GCGGCTACTACGTGTGTAGT+GGG - chr5_4:41720137-41720156 None:intergenic 55.0%
TGCGGCTACTACGTGTGTAG+TGG - chr5_4:41720138-41720157 None:intergenic 55.0%
GGAGTTGGCAGAGACGTTTG+TGG - chr5_4:41720448-41720467 None:intergenic 55.0%
TCTCTTGGTTGGGAGGTAGG+TGG - chr5_4:41720479-41720498 None:intergenic 55.0%
GGATAAGCTGATCACGGTGG+CGG - chr5_4:41720510-41720529 None:intergenic 55.0%
GACGGATAAGCTGATCACGG+TGG - chr5_4:41720513-41720532 None:intergenic 55.0%
!! GGTTTGCTGAGAGGGTGTCA+AGG - chr5_4:41720631-41720650 None:intergenic 55.0%
AGCGTGGGTGATGTAGAAGG+GGG - chr5_4:41720656-41720675 None:intergenic 55.0%
GGAGGGAGGTAGCGAAGATT+AGG - chr5_4:41720682-41720701 None:intergenic 55.0%
! GCCGGAGTGTTTCTCATTGG+TGG - chr5_4:41720703-41720722 None:intergenic 55.0%
GGAGATATGGTGAGGAGGCT+GGG - chr5_4:41720742-41720761 None:intergenic 55.0%
GTTTGGGTGTGAGGCAGTTG+GGG - chr5_4:41720847-41720866 None:intergenic 55.0%
GGTTTGGGTGTGAGGCAGTT+GGG - chr5_4:41720848-41720867 None:intergenic 55.0%
AGGTTTGGGTGTGAGGCAGT+TGG - chr5_4:41720849-41720868 None:intergenic 55.0%
!!! GTTGGCGTTTTGGGATCCGT+TGG - chr5_4:41721119-41721138 None:intergenic 55.0%
TCCCAAAACGCCAACTTCCG+AGG + chr5_4:41721124-41721143 Msa0851460:intron 55.0%
TCAACACCGCCCGTAAAGCT+CGG + chr5_4:41721308-41721327 Msa0851460:intron 55.0%
TTACAACGGGGACTGCGTCA+AGG - chr5_4:41721517-41721536 None:intergenic 55.0%
TGACGCAGTCCCCGTTGTAA+TGG + chr5_4:41721517-41721536 Msa0851460:intron 55.0%
! AAATGGCGTTCCCGGTGTTG+TGG - chr5_4:41721618-41721637 None:intergenic 55.0%
!! TTCGGTGGATTGGGGGTACT+TGG - chr5_4:41721656-41721675 None:intergenic 55.0%
GGTCCGGATGGAGTGAATCT+TGG - chr5_4:41722054-41722073 None:intergenic 55.0%
AGATTCACTCCATCCGGACC+TGG + chr5_4:41722054-41722073 Msa0851460:intron 55.0%
! CGGCTTCATTGGTTGAGGGA+GGG - chr5_4:41722366-41722385 None:intergenic 55.0%
! ACGGCTTCATTGGTTGAGGG+AGG - chr5_4:41722367-41722386 None:intergenic 55.0%
ACAGAGGTTGCAACTAGGGG+TGG + chr5_4:41722549-41722568 Msa0851460:intron 55.0%
CAGAGGTTGCAACTAGGGGT+GGG + chr5_4:41722550-41722569 Msa0851460:intron 55.0%
AACTAGGGGTGGGAATGAGC+CGG + chr5_4:41722560-41722579 Msa0851460:intron 55.0%
GGTCTACTACAAGCTCGGCT+CGG - chr5_4:41724291-41724310 None:intergenic 55.0%
! GGCTCGGTCTACTACAAGCT+CGG - chr5_4:41724296-41724315 None:intergenic 55.0%
TGCACGTTGCAACTAGGGGT+GGG - chr5_4:41724349-41724368 None:intergenic 55.0%
TTGCACGTTGCAACTAGGGG+TGG - chr5_4:41724350-41724369 None:intergenic 55.0%
GTCTTAACCCGAACCCTAGC+TGG - chr5_4:41714376-41714395 None:intergenic 55.0%
CGGAAAGTTGCCAGGGTTGA+AGG + chr5_4:41714511-41714530 Msa0851460:five_prime_UTR 55.0%
GTTGCCAGGGTTGAAGGAAG+AGG + chr5_4:41714517-41714536 Msa0851460:five_prime_UTR 55.0%
!! AGGTTTGGTGGCAGGTGAAC+TGG - chr5_4:41714632-41714651 None:intergenic 55.0%
! GAATTTGAAGCCCTCCCCGA+TGG + chr5_4:41725367-41725386 Msa0851460:CDS 55.0%
TACGGACTCGGAATGCCATC+GGG - chr5_4:41725385-41725404 None:intergenic 55.0%
CTACGGACTCGGAATGCCAT+CGG - chr5_4:41725386-41725405 None:intergenic 55.0%
GCATTCCGAGTCCGTAGCAA+GGG + chr5_4:41725389-41725408 Msa0851460:CDS 55.0%
ACCAATCGCCACTCTCCACC+AGG + chr5_4:41714721-41714740 Msa0851460:five_prime_UTR 60.0%
ACCTGGTGGAGAGTGGCGAT+TGG - chr5_4:41714725-41714744 None:intergenic 60.0%
CCTTTGCTACGGACTCGGAG+TGG - chr5_4:41714874-41714893 None:intergenic 60.0%
CCACTCCGAGTCCGTAGCAA+AGG + chr5_4:41714871-41714890 Msa0851460:CDS 60.0%
GGCCCTTAGAGTGTGGCCAT+TGG + chr5_4:41715951-41715970 Msa0851460:intron 60.0%
CGGGCGAGATTCCACTTCCA+AGG - chr5_4:41716130-41716149 None:intergenic 60.0%
GGCCCTTAGAGTGTGGTCGT+TGG + chr5_4:41716465-41716484 Msa0851460:intron 60.0%
GACTTCGTTGTTGTCGGGGG+TGG + chr5_4:41716706-41716725 Msa0851460:intron 60.0%
TTCGTTGTTGTCGGGGGTGG+AGG + chr5_4:41716709-41716728 Msa0851460:intron 60.0%
TCGTTGTTGTCGGGGGTGGA+GGG + chr5_4:41716710-41716729 Msa0851460:intron 60.0%
! GCGGAACCTGCTGCTGTTTG+TGG + chr5_4:41716929-41716948 Msa0851460:intron 60.0%
AATGTGTGGAGGGGAGGGAG+GGG - chr5_4:41718681-41718700 None:intergenic 60.0%
GAGGGTCCGACCACCATCTT+TGG + chr5_4:41719775-41719794 Msa0851460:intron 60.0%
ACGCGCTCTTGAGTGACCTG+TGG + chr5_4:41719968-41719987 Msa0851460:intron 60.0%
GGGGTGCGGTTTCGAAGAGA+CGG - chr5_4:41720117-41720136 None:intergenic 60.0%
TGACAGGTGGCAGTGGGATC+CGG - chr5_4:41720354-41720373 None:intergenic 60.0%
GCAGAGACGTTTGTGGGCGT+GGG - chr5_4:41720441-41720460 None:intergenic 60.0%
! GGGAGGTAGGTGGTGATGCT+TGG - chr5_4:41720469-41720488 None:intergenic 60.0%
!! AGAGGGTGTCAAGGGTGGTG+GGG - chr5_4:41720622-41720641 None:intergenic 60.0%
!! GAGAGGGTGTCAAGGGTGGT+GGG - chr5_4:41720623-41720642 None:intergenic 60.0%
!! TGAGAGGGTGTCAAGGGTGG+TGG - chr5_4:41720624-41720643 None:intergenic 60.0%
!! TGCTGAGAGGGTGTCAAGGG+TGG - chr5_4:41720627-41720646 None:intergenic 60.0%
!! AGGGGGCTGGTTTGCTGAGA+GGG - chr5_4:41720639-41720658 None:intergenic 60.0%
!! AAGGGGGCTGGTTTGCTGAG+AGG - chr5_4:41720640-41720659 None:intergenic 60.0%
TGGGTGATGTAGAAGGGGGC+TGG - chr5_4:41720652-41720671 None:intergenic 60.0%
! GGGGCCGGAGTGTTTCTCAT+TGG - chr5_4:41720706-41720725 None:intergenic 60.0%
AGGCTGGGAGGTTGGAGGTT+GGG - chr5_4:41720727-41720746 None:intergenic 60.0%
GATATGGTGAGGAGGCTGGG+AGG - chr5_4:41720739-41720758 None:intergenic 60.0%
GGGAGATATGGTGAGGAGGC+TGG - chr5_4:41720743-41720762 None:intergenic 60.0%
GGGGAGGGAGTGAGGATAAC+AGG - chr5_4:41720922-41720941 None:intergenic 60.0%
!! GGATTGGGGGTACTTGGACG+CGG - chr5_4:41721650-41721669 None:intergenic 60.0%
ACTAGGGGTGGGAATGAGCC+GGG + chr5_4:41722561-41722580 Msa0851460:intron 60.0%
ACAGGGTAATAGGCCAGGCC+AGG - chr5_4:41722695-41722714 None:intergenic 60.0%
GCCTATCAAGCCTACCAGGC+CGG - chr5_4:41724183-41724202 None:intergenic 60.0%
ACTAGGGGTGGGAATAGGCC+AGG - chr5_4:41724338-41724357 None:intergenic 60.0%
ACCAATCGCCAGTCTCCACC+AGG + chr5_4:41725185-41725204 Msa0851460:CDS 60.0%
ACCTGGTGGAGACTGGCGAT+TGG - chr5_4:41725189-41725208 None:intergenic 60.0%
ACTCGGAATGCCATCGGGGA+GGG - chr5_4:41725380-41725399 None:intergenic 60.0%
ACGGACTCGGAATGCCATCG+GGG - chr5_4:41725384-41725403 None:intergenic 60.0%
GGCATTCCGAGTCCGTAGCA+AGG + chr5_4:41725388-41725407 Msa0851460:CDS 60.0%
GGGAGAGCAACCAGGGGTTG+AGG + chr5_4:41718655-41718674 Msa0851460:intron 65.0%
GCGTGGCTCTCTGCAGGATG+CGG - chr5_4:41720156-41720175 None:intergenic 65.0%
! GCAAAGGCGTGGCTCTCTGC+AGG - chr5_4:41720162-41720181 None:intergenic 65.0%
GTGGGCGTGGGAGGACAAGT+TGG - chr5_4:41720429-41720448 None:intergenic 65.0%
GAGACGTTTGTGGGCGTGGG+AGG - chr5_4:41720438-41720457 None:intergenic 65.0%
GGCAGAGACGTTTGTGGGCG+TGG - chr5_4:41720442-41720461 None:intergenic 65.0%
!! GTGTCAAGGGTGGTGGGGGA+TGG - chr5_4:41720617-41720636 None:intergenic 65.0%
!! GAGGGTGTCAAGGGTGGTGG+GGG - chr5_4:41720621-41720640 None:intergenic 65.0%
GCTGGGAGGTTGGAGGTTGG+GGG - chr5_4:41720725-41720744 None:intergenic 65.0%
GGCTGGGAGGTTGGAGGTTG+GGG - chr5_4:41720726-41720745 None:intergenic 65.0%
GAGGCTGGGAGGTTGGAGGT+TGG - chr5_4:41720728-41720747 None:intergenic 65.0%
TGAGGAGGCTGGGAGGTTGG+AGG - chr5_4:41720732-41720751 None:intergenic 65.0%
TGGTGAGGAGGCTGGGAGGT+TGG - chr5_4:41720735-41720754 None:intergenic 65.0%
TACTCGTATACGGGCCGGCC+TGG + chr5_4:41724166-41724185 Msa0851460:intron 65.0%
GCCGGCCTGGTAGGCTTGAT+AGG + chr5_4:41724179-41724198 Msa0851460:intron 65.0%
CTCGTCAGGGGCCTATGGCT+CGG - chr5_4:41724312-41724331 None:intergenic 65.0%
AGCCATAGGCCCCTGACGAG+CGG + chr5_4:41724312-41724331 Msa0851460:intron 65.0%
ATAGGCCAGGCCGCTCGTCA+GGG - chr5_4:41724325-41724344 None:intergenic 65.0%
AATAGGCCAGGCCGCTCGTC+AGG - chr5_4:41724326-41724345 None:intergenic 65.0%
GACTCGGAATGCCATCGGGG+AGG - chr5_4:41725381-41725400 None:intergenic 65.0%
GAGGTGCGGAGGCTGCTGCT+TGG - chr5_4:41718076-41718095 None:intergenic 70.0%
GGAGGTTGGAGGTTGGGGGC+CGG - chr5_4:41720721-41720740 None:intergenic 70.0%
CGTATACGGGCCGGCCTGGT+AGG + chr5_4:41724170-41724189 Msa0851460:intron 70.0%
TAGGCCAGGCCGCTCGTCAG+GGG - chr5_4:41724324-41724343 None:intergenic 70.0%
GAGGGAGGGGCCTCAACCCC+TGG - chr5_4:41718668-41718687 None:intergenic 75.0%
GGCCGCTCGTCAGGGGCCTA+TGG - chr5_4:41724317-41724336 None:intergenic 75.0%
TAGGCCCCTGACGAGCGGCC+TGG + chr5_4:41724317-41724336 Msa0851460:intron 75.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 41714282 41726057 41714282 ID=Msa0851460;Name=Msa0851460
chr5_4 mRNA 41714282 41726057 41714282 ID=Msa0851460-mRNA-1;Parent=Msa0851460;Name=Msa0851460-mRNA-1;_AED=0.10;_eAED=0.10;_QI=412|0.5|0.22|1|0.75|0.55|9|0|480
chr5_4 exon 41714282 41714418 41714282 ID=Msa0851460-mRNA-1:exon:13218;Parent=Msa0851460-mRNA-1
chr5_4 exon 41714497 41714742 41714497 ID=Msa0851460-mRNA-1:exon:13219;Parent=Msa0851460-mRNA-1
chr5_4 exon 41714839 41714892 41714839 ID=Msa0851460-mRNA-1:exon:13220;Parent=Msa0851460-mRNA-1
chr5_4 exon 41715014 41715205 41715014 ID=Msa0851460-mRNA-1:exon:13221;Parent=Msa0851460-mRNA-1
chr5_4 exon 41715236 41715448 41715236 ID=Msa0851460-mRNA-1:exon:13222;Parent=Msa0851460-mRNA-1
chr5_4 exon 41724804 41724881 41724804 ID=Msa0851460-mRNA-1:exon:13223;Parent=Msa0851460-mRNA-1
chr5_4 exon 41724961 41725206 41724961 ID=Msa0851460-mRNA-1:exon:13224;Parent=Msa0851460-mRNA-1
chr5_4 exon 41725294 41725410 41725294 ID=Msa0851460-mRNA-1:exon:13225;Parent=Msa0851460-mRNA-1
chr5_4 exon 41725489 41726057 41725489 ID=Msa0851460-mRNA-1:exon:13226;Parent=Msa0851460-mRNA-1
chr5_4 five_prime_UTR 41714282 41714418 41714282 ID=Msa0851460-mRNA-1:five_prime_utr;Parent=Msa0851460-mRNA-1
chr5_4 five_prime_UTR 41714497 41714742 41714497 ID=Msa0851460-mRNA-1:five_prime_utr;Parent=Msa0851460-mRNA-1
chr5_4 five_prime_UTR 41714839 41714867 41714839 ID=Msa0851460-mRNA-1:five_prime_utr;Parent=Msa0851460-mRNA-1
chr5_4 CDS 41714868 41714892 41714868 ID=Msa0851460-mRNA-1:cds;Parent=Msa0851460-mRNA-1
chr5_4 CDS 41715014 41715205 41715014 ID=Msa0851460-mRNA-1:cds;Parent=Msa0851460-mRNA-1
chr5_4 CDS 41715236 41715448 41715236 ID=Msa0851460-mRNA-1:cds;Parent=Msa0851460-mRNA-1
chr5_4 CDS 41724804 41724881 41724804 ID=Msa0851460-mRNA-1:cds;Parent=Msa0851460-mRNA-1
chr5_4 CDS 41724961 41725206 41724961 ID=Msa0851460-mRNA-1:cds;Parent=Msa0851460-mRNA-1
chr5_4 CDS 41725294 41725410 41725294 ID=Msa0851460-mRNA-1:cds;Parent=Msa0851460-mRNA-1
chr5_4 CDS 41725489 41726057 41725489 ID=Msa0851460-mRNA-1:cds;Parent=Msa0851460-mRNA-1
Gene Sequence

>Msa0851460

ATGCCACTCCGAGTCCGTAGCAAAGGTGCTGGGAAATCTAGGGTTGAAAGCATAAGCAAACTGTTCTCAAGCTCTGACCACAATATTTTAGTTGGGGGTCAAGGGAGTAATTGGGAACTTTCAAGCTTTGAGAGAGGGAAATCCATTTCAGATAGCAGCAAACCTCAACCTTTGAAGTTTTCTGACCAGCAGAACGTTATAGCTGGTGGTCAACGGAGTAGCAGCAAACCTCAACCTTTAGAGAACATTTGGATTGATGAAGCCTCTCCCAAATCCAGTTCACCTGTCACTGAACCTCAACAACCTCTCAATGATGAGGAGGACTTGAGTTACACTAACTCTCATCTCACTTTTGAACAAATAGCGGAAAACGCAAAAAAATTACATGAACGCATGATGGCTGAATCCGAATCTGAATCCGATGACAATGCAGGAACAACTCCATCATCATCATCTTGGAAACCAGCTAGGGTTCGGGTTAAGACTAGAAAACGAGTCCATGTTAATGGAATTGCAACATCTCGGAAAGTTGCCAGGGTTGAAGGAAGAGGAAGACCTTCTCTCAAATCGATTTCAAACTCTGAGGAAGAGAACGCTTCATTTGAGGTTGATGAAGGAACAGGAGTGCCATCTCCAAAATCCAGTTCACCTGCCACCAAACCTCAACAACTTATCGATTCACCACTCCCTTCTGATCGATCTAAAAGAAAGAAGAGAAAGACAGCTACACGCACCAATCGCCAGTCTCCACCAGAAAGAAGACTTCGAAAAGCTAGGGTTGGGGGAAAATCCTCTGATAACCCTAAAAAAGAAAATCTTGATAATCAGAATTTGAAGCCCTCCCCGATGGCATTCCGAGTCCGTAGCAAGGGTGCTGGGAAATCTAGTGTTGAAGGAAGTAGAATGCCCTCTCAGAAATCCATTTCACTTGGCATAAGCAAGCTTCGACCTGACAACATGTCAAGCTCTGACCAGAACGTTTTAGTTGGGGAACTTTCAAGCTCAGAAAGAGGGAGGAAATCCATTTCAGCAGGTAGCAGCAAACCTCAACCTTCGAAGTTTTCTGATCAGCAGAACGTTATAGCTGGTGGTCAACGGAGTAATGAGAGAGGGGGAAAATCCATTTCATGTAGCAGCAAACCTCAACCTTTAGAGAACATTTGGATTGATGAAGCCTCTCCCAAATCCAGTTCACCTGTCACTGAACCTCAACAACCTCTCAGTGATGAGGAGGACTTGAGTTACACTAACTCTCATCTCACTTTTGAACAAATAGCGGAAAACATGAAAAAATTAGATGAACTCATATTGGCTGAATCCGAATCCGAATCCGATGACAATGGTATGCAGTGCAATTGTGACTTCAACAACTGCACATGTCTTAAATCTTATCGTGAATATCTTGCACATGACTATGCTGAGTTGGATTTTAGTATATAC
Protein sequence

>Msa0851460

MPLRVRSKGAGKSRVESISKLFSSSDHNILVGGQGSNWELSSFERGKSISDSSKPQPLKFSDQQNVIAGGQRSSSKPQPLENIWIDEASPKSSSPVTEPQQPLNDEEDLSYTNSHLTFEQIAENAKKLHERMMAESESESDDNAGTTPSSSSWKPARVRVKTRKRVHVNGIATSRKVARVEGRGRPSLKSISNSEEENASFEVDEGTGVPSPKSSSPATKPQQLIDSPLPSDRSKRKKRKTATRTNRQSPPERRLRKARVGGKSSDNPKKENLDNQNLKPSPMAFRVRSKGAGKSSVEGSRMPSQKSISLGISKLRPDNMSSSDQNVLVGELSSSERGRKSISAGSSKPQPSKFSDQQNVIAGGQRSNERGGKSISCSSKPQPLENIWIDEASPKSSSPVTEPQQPLSDEEDLSYTNSHLTFEQIAENMKKLDELILAESESESDDNGMQCNCDFNNCTCLKSYREYLAHDYAELDFSIY