AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0853310

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0853310 MtrunA17_Chr5g0424861 97.126 348 9 1 16 362 1 348 0.0 695
Msa0853310 MtrunA17_Chr5g0424861 80.105 191 27 1 362 541 134 324 1.06e-99 305
Msa0853310 MtrunA17_Chr5g0424851 81.114 413 65 3 141 541 1 412 0.0 669
Msa0853310 MtrunA17_Chr5g0424851 76.303 211 50 0 146 356 220 430 4.91e-109 332
Msa0853310 MtrunA17_Chr3g0115371 65.714 350 112 4 16 361 1 346 7.49e-157 451
Msa0853310 MtrunA17_Chr3g0115371 61.376 189 62 1 364 541 135 323 2.20e-73 237
Msa0853310 MtrunA17_Chr3g0124601 49.862 363 171 3 4 361 2 358 3.49e-116 348
Msa0853310 MtrunA17_Chr3g0124601 50.794 189 82 1 364 541 147 335 3.62e-55 189
Msa0853310 MtrunA17_Chr8g0382861 47.126 348 177 4 14 361 13 353 3.70e-97 299
Msa0853310 MtrunA17_Chr8g0382861 45.550 191 93 1 362 541 140 330 7.39e-45 162
Msa0853310 MtrunA17_Chr8g0353501 52.613 287 125 2 82 361 181 463 8.40e-90 283
Msa0853310 MtrunA17_Chr8g0353501 44.670 197 91 1 363 541 244 440 6.88e-46 167
Msa0853310 MtrunA17_Chr7g0256211 51.916 287 127 3 82 361 167 449 2.70e-89 282
Msa0853310 MtrunA17_Chr7g0256211 43.147 197 94 2 363 541 230 426 5.40e-44 162
Msa0853310 MtrunA17_Chr2g0321431 52.500 280 126 2 82 361 194 466 5.51e-89 282
Msa0853310 MtrunA17_Chr2g0321431 42.105 190 97 2 362 540 255 442 2.08e-39 150
Msa0853310 MtrunA17_Chr7g0258321 47.351 302 148 3 69 361 161 460 2.50e-87 277
Msa0853310 MtrunA17_Chr7g0258321 41.538 195 99 1 362 541 243 437 1.19e-41 155
Msa0853310 MtrunA17_Chr1g0174701 42.559 383 194 7 4 361 122 503 3.99e-86 275
Msa0853310 MtrunA17_Chr1g0174701 41.026 195 100 1 362 541 286 480 1.80e-40 153
Msa0853310 MtrunA17_Chr4g0026401 44.118 340 163 5 22 361 146 458 7.19e-84 269
Msa0853310 MtrunA17_Chr4g0026401 42.408 191 97 2 362 541 247 435 1.96e-39 150
Msa0853310 MtrunA17_Chr5g0422771 45.638 298 151 2 71 361 168 461 8.93e-79 254
Msa0853310 MtrunA17_Chr5g0422771 38.542 192 100 2 363 536 242 433 1.55e-35 138
Msa0853310 MtrunA17_Chr1g0210151 47.059 289 147 3 77 360 49 336 1.06e-77 248
Msa0853310 MtrunA17_Chr1g0210151 40.722 194 101 1 362 541 121 314 2.12e-41 152
Msa0853310 MtrunA17_Chr3g0093451 44.242 165 85 3 83 240 47 211 1.56e-41 148
Msa0853310 MtrunA17_Chr3g0093451 35.789 95 60 1 361 454 117 211 4.33e-18 83.2
Msa0853310 MtrunA17_Chr1g0196951 31.000 200 115 5 163 357 59 240 2.69e-15 75.9
Msa0853310 MtrunA17_Chr1g0196951 31.395 172 102 4 377 541 59 221 3.24e-11 63.5
Msa0853310 MtrunA17_Chr7g0242651 25.698 179 117 3 188 354 45 219 8.16e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0853310 AT1G77920.1 52.520 377 149 6 1 361 1 363 1.39e-120 360
Msa0853310 AT1G77920.1 51.042 192 82 1 362 541 149 340 4.14e-58 198
Msa0853310 AT1G22070.1 51.359 368 154 4 14 361 17 379 2.38e-116 349
Msa0853310 AT1G22070.1 51.295 193 81 1 362 541 164 356 1.53e-58 199
Msa0853310 AT5G10030.5 50.693 361 172 3 4 361 2 359 3.24e-115 346
Msa0853310 AT5G10030.5 51.832 191 81 1 362 541 146 336 1.54e-56 194
Msa0853310 AT5G10030.3 50.693 361 172 3 4 361 2 359 3.24e-115 346
Msa0853310 AT5G10030.3 51.832 191 81 1 362 541 146 336 1.54e-56 194
Msa0853310 AT5G10030.1 50.693 361 172 3 4 361 2 359 3.24e-115 346
Msa0853310 AT5G10030.1 51.832 191 81 1 362 541 146 336 1.54e-56 194
Msa0853310 AT5G10030.4 50.693 361 172 3 4 361 2 359 3.24e-115 346
Msa0853310 AT5G10030.4 51.832 191 81 1 362 541 146 336 1.54e-56 194
Msa0853310 AT5G10030.2 50.693 361 172 3 4 361 2 359 3.24e-115 346
Msa0853310 AT5G10030.2 51.832 191 81 1 362 541 146 336 1.54e-56 194
Msa0853310 AT5G65210.5 49.724 362 178 3 4 361 2 363 1.57e-114 344
Msa0853310 AT5G65210.5 48.677 189 86 1 364 541 152 340 2.49e-52 182
Msa0853310 AT5G65210.7 49.724 362 178 3 4 361 2 363 1.57e-114 344
Msa0853310 AT5G65210.7 48.677 189 86 1 364 541 152 340 2.49e-52 182
Msa0853310 AT5G65210.3 49.724 362 178 3 4 361 2 363 1.57e-114 344
Msa0853310 AT5G65210.3 48.677 189 86 1 364 541 152 340 2.49e-52 182
Msa0853310 AT5G65210.1 49.724 362 178 3 4 361 2 363 1.57e-114 344
Msa0853310 AT5G65210.1 48.677 189 86 1 364 541 152 340 2.49e-52 182
Msa0853310 AT5G65210.2 49.724 362 178 3 4 361 2 363 1.57e-114 344
Msa0853310 AT5G65210.2 48.677 189 86 1 364 541 152 340 2.49e-52 182
Msa0853310 AT5G65210.4 49.724 362 178 3 4 361 2 363 1.57e-114 344
Msa0853310 AT5G65210.4 48.677 189 86 1 364 541 152 340 2.49e-52 182
Msa0853310 AT5G65210.6 54.639 291 131 1 72 361 3 293 2.82e-104 315
Msa0853310 AT5G65210.6 48.677 189 86 1 364 541 82 270 3.23e-53 182
Msa0853310 AT1G08320.2 44.327 379 171 9 46 413 8 357 3.00e-92 286
Msa0853310 AT1G08320.2 43.455 191 95 2 362 541 115 303 2.02e-44 161
Msa0853310 AT1G08320.5 44.327 379 171 9 46 413 8 357 3.00e-92 286
Msa0853310 AT1G08320.5 43.455 191 95 2 362 541 115 303 2.02e-44 161
Msa0853310 AT1G08320.1 43.814 388 178 9 37 413 123 481 1.25e-90 286
Msa0853310 AT1G08320.1 43.455 191 95 2 362 541 239 427 2.98e-43 160
Msa0853310 AT1G08320.4 43.814 388 178 9 37 413 123 481 1.25e-90 286
Msa0853310 AT1G08320.4 43.455 191 95 2 362 541 239 427 2.98e-43 160
Msa0853310 AT1G08320.3 43.814 388 178 9 37 413 123 481 1.25e-90 286
Msa0853310 AT1G08320.3 43.455 191 95 2 362 541 239 427 2.98e-43 160
Msa0853310 AT5G06839.1 44.571 350 170 5 36 361 63 412 5.88e-86 272
Msa0853310 AT5G06839.1 41.026 195 95 1 362 536 190 384 5.65e-41 153
Msa0853310 AT5G06950.2 49.650 286 134 2 82 361 46 327 7.78e-86 269
Msa0853310 AT5G06950.2 40.306 196 100 1 363 541 109 304 5.56e-42 154
Msa0853310 AT5G06950.4 49.650 286 134 2 82 361 46 327 7.78e-86 269
Msa0853310 AT5G06950.4 40.306 196 100 1 363 541 109 304 5.56e-42 154
Msa0853310 AT5G06950.1 49.650 286 134 2 82 361 46 327 7.78e-86 269
Msa0853310 AT5G06950.1 40.306 196 100 1 363 541 109 304 5.56e-42 154
Msa0853310 AT5G06950.5 49.650 286 134 2 82 361 46 327 7.78e-86 269
Msa0853310 AT5G06950.5 40.306 196 100 1 363 541 109 304 5.56e-42 154
Msa0853310 AT5G06950.3 49.650 286 134 2 82 361 46 327 7.78e-86 269
Msa0853310 AT5G06950.3 40.306 196 100 1 363 541 109 304 5.56e-42 154
Msa0853310 AT5G06839.3 47.869 305 144 2 72 361 151 455 1.76e-85 272
Msa0853310 AT5G06839.3 41.026 195 95 1 362 536 233 427 9.44e-41 153
Msa0853310 AT5G06839.2 43.875 351 172 5 36 361 63 413 6.63e-85 270
Msa0853310 AT5G06839.2 40.513 195 96 1 362 536 191 385 1.41e-40 152
Msa0853310 AT3G12250.5 49.650 286 134 2 82 361 19 300 6.95e-85 266
Msa0853310 AT3G12250.5 39.796 196 101 1 363 541 82 277 7.98e-42 152
Msa0853310 AT3G12250.6 49.650 286 134 2 82 361 46 327 1.29e-84 266
Msa0853310 AT3G12250.6 39.796 196 101 1 363 541 109 304 1.21e-41 152
Msa0853310 AT3G12250.2 49.650 286 134 2 82 361 46 327 1.29e-84 266
Msa0853310 AT3G12250.2 39.796 196 101 1 363 541 109 304 1.21e-41 152
Msa0853310 AT3G12250.7 49.650 286 134 2 82 361 46 327 1.29e-84 266
Msa0853310 AT3G12250.7 39.796 196 101 1 363 541 109 304 1.21e-41 152
Msa0853310 AT3G12250.1 49.650 286 134 2 82 361 46 327 1.29e-84 266
Msa0853310 AT3G12250.1 39.796 196 101 1 363 541 109 304 1.21e-41 152
Msa0853310 AT3G12250.3 49.650 286 134 2 82 361 40 321 1.34e-84 266
Msa0853310 AT3G12250.3 39.796 196 101 1 363 541 103 298 1.35e-41 152
Msa0853310 AT3G12250.4 49.650 286 134 2 82 361 71 352 5.80e-84 265
Msa0853310 AT3G12250.4 39.796 196 101 1 363 541 134 329 4.06e-41 152
Msa0853310 AT5G06960.3 49.301 286 135 2 82 361 26 307 1.07e-83 263
Msa0853310 AT5G06960.3 40.000 195 100 1 364 541 90 284 2.89e-41 151
Msa0853310 AT5G06960.2 49.301 286 135 2 82 361 46 327 1.12e-83 263
Msa0853310 AT5G06960.2 40.000 195 100 1 364 541 110 304 3.62e-41 151
Msa0853310 AT5G06960.1 49.301 286 135 2 82 361 46 327 1.12e-83 263
Msa0853310 AT5G06960.1 40.000 195 100 1 364 541 110 304 3.62e-41 151
Msa0853310 AT1G68640.1 45.638 298 150 3 72 361 156 449 8.16e-73 239
Msa0853310 AT1G68640.1 40.704 199 101 1 360 541 228 426 5.90e-36 140
Msa0853310 AT1G58330.1 29.381 194 114 6 178 354 36 223 1.38e-12 67.8

Find 127 sgRNAs with CRISPR-Local

Find 652 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTAATTATTGCTTCTTAA+AGG 0.144893 5_4:-45129942 None:intergenic
TTTATTGGATGTCGGTTATA+TGG 0.184139 5_4:-45128767 Msa0853310:CDS
TCTTTATTTGAAATCGAATA+TGG 0.210001 5_4:-45118371 Msa0853310:three_prime_UTR
TCCATACACCAGATATTAAA+TGG 0.211492 5_4:+45128455 None:intergenic
TCTTTGTTTGAAATTGAATA+TGG 0.229069 5_4:-45124439 Msa0853310:CDS
TCTTTGTTTGAAATTGAATA+TGG 0.229069 5_4:-45128637 Msa0853310:CDS
TACATTACCTGGATTATAAA+AGG 0.233889 5_4:+45117213 None:intergenic
TACTGCTTCTACTTTGTTCA+TGG 0.265007 5_4:+45123366 None:intergenic
CAAGCTGATCCCTTGGATTT+CGG 0.267505 5_4:-45117288 Msa0853310:three_prime_UTR
CAAGCTGATCCCTTGGATTT+CGG 0.267505 5_4:-45128058 Msa0853310:CDS
TTTATACAGAAACAGTTTAT+TGG 0.277561 5_4:-45128782 Msa0853310:CDS
TGCTTAAGGCTTGCTGGCTA+TGG 0.285832 5_4:-45122768 Msa0853310:exon
CTTAATTATTGCTTCTTAAA+GGG 0.312736 5_4:-45129941 Msa0853310:five_prime_UTR
GAGCTGCTTGCCTAATTGTT+AGG 0.316189 5_4:+45117047 None:intergenic
TGCTCAAGGCTTGTTGGCTA+TGG 0.316587 5_4:-45127726 Msa0853310:CDS
ATCCTCCGATCCAAAGAAAA+AGG 0.331172 5_4:+45128416 None:intergenic
ATCCTCCAAACCAAAGAAAA+AGG 0.332466 5_4:+45124218 None:intergenic
ATCCTCCAATCCAAAGAAAA+AGG 0.340935 5_4:+45118150 None:intergenic
TCCATTTAATATCTGGTGTA+TGG 0.348140 5_4:-45128456 Msa0853310:CDS
TTATGTTCATCTTCAACATT+GGG 0.356119 5_4:+45129691 None:intergenic
TCATTCAAATTCTCAAGTTT+CGG 0.363992 5_4:+45128187 None:intergenic
GCTGAAGATGCACTGTCAAT+AGG 0.369583 5_4:-45128118 Msa0853310:CDS
CTTATGTTCATCTTCAACAT+TGG 0.379233 5_4:+45129690 None:intergenic
GCTCAAGGCTTGTTGGCTAT+GGG 0.379556 5_4:-45127725 Msa0853310:CDS
ACAATTGCGCTAGCTGCTTA+AGG 0.380024 5_4:-45122782 Msa0853310:exon
CTCAACTAATCGCGCCGAAA+AGG 0.387136 5_4:-45129800 Msa0853310:CDS
TTCTGAAAAGATTTGAGTAT+TGG 0.389399 5_4:+45128509 None:intergenic
GCTTAAGGCTTGCTGGCTAT+GGG 0.389627 5_4:-45122767 Msa0853310:exon
TCAAGCTGCTCAAGGCTTGT+TGG 0.395796 5_4:-45127732 Msa0853310:CDS
GCTAGCTGCTTAAGGCTTGC+TGG 0.404360 5_4:-45122774 Msa0853310:exon
ACAGGCTTATGTTCAACAAC+TGG 0.406023 5_4:-45128967 Msa0853310:intron
CTTTCAGATGGCTGCTGCCA+TGG 0.412683 5_4:-45117256 Msa0853310:three_prime_UTR
CTTTCAGATGGCTGCTGCCA+TGG 0.412683 5_4:-45128026 Msa0853310:CDS
TATCGAGAAAACAAGAAAAC+AGG 0.417815 5_4:-45128907 Msa0853310:intron
GATGCTTTATATTTAATCTC+TGG 0.418501 5_4:-45124265 Msa0853310:CDS
CTTTGCAGGCAGATCACCTT+AGG 0.420677 5_4:-45127796 Msa0853310:intron
TTATTGGATGTCGGTTATAT+GGG 0.423086 5_4:-45128766 Msa0853310:CDS
CTAACCGGAGTTTATTGTTC+CGG 0.426569 5_4:+45128738 None:intergenic
TTCTGAAAAGATCTGAGTAT+TGG 0.428096 5_4:+45118243 None:intergenic
CCTCCCACATAGTCACTTGA+AGG 0.428980 5_4:+45129757 None:intergenic
AGCTACTCTCAACAAGTAGA+TGG 0.434040 5_4:+45118270 None:intergenic
AAGGTTCTCTTGATTCTTGA+GGG 0.435161 5_4:+45129542 None:intergenic
CCCTTGGATTTCGGAAACTA+CGG 0.436857 5_4:-45117279 Msa0853310:three_prime_UTR
CCCTTGGATTTCGGAAACTA+CGG 0.436857 5_4:-45128049 Msa0853310:CDS
CAAGAATCAAGAGAACCTTC+TGG 0.437311 5_4:-45129538 Msa0853310:CDS
TACTGCTTCTCCTTTGTCCA+TGG 0.443791 5_4:+45128009 None:intergenic
CTGAAGATGCACTGTCAATA+GGG 0.444666 5_4:-45128117 Msa0853310:CDS
TCTACCAGGCAGATCGCCTT+AGG 0.453718 5_4:-45117099 Msa0853310:intron
GACAAAGGAGAAGCAGTAGA+AGG 0.456711 5_4:-45128004 Msa0853310:CDS
CAACATTCAAGCTGATCCCT+TGG 0.462368 5_4:-45128065 Msa0853310:CDS
CAGCTTGAAGAGAGGATAAA+CGG 0.467500 5_4:+45123461 None:intergenic
CTCTACAGGCAGATCACCTT+AGG 0.467754 5_4:-45122838 Msa0853310:intron
CATCATTCAAGCTGATCCCT+TGG 0.468378 5_4:-45117295 Msa0853310:three_prime_UTR
GTCGGTTATATGGGAACGTC+CGG 0.469360 5_4:-45128757 Msa0853310:CDS
GAAGGTTCTCTTGATTCTTG+AGG 0.474792 5_4:+45129541 None:intergenic
ATCAGTTAAAGCATCAAGCT+TGG 0.477328 5_4:+45117416 None:intergenic
TGTTGTTGATCATACTCTGC+TGG 0.478454 5_4:+45128083 None:intergenic
TACCACTTCTCCTTTGTCCA+TGG 0.482076 5_4:+45117239 None:intergenic
TCACCTTAGGCAACAAACTC+TGG 0.482872 5_4:-45122825 Msa0853310:CDS
ATGTCACGCATCTTATCAAT+TGG 0.485700 5_4:-45127755 Msa0853310:CDS
TCAGTTAAAGCATCAAGCTT+GGG 0.486284 5_4:+45117417 None:intergenic
GCACCAGAGTTTCTTGCCTA+AGG 0.487385 5_4:+45117083 None:intergenic
TCAGTTAAAGCATCGAGCTT+AGG 0.490178 5_4:+45123511 None:intergenic
CTCAAGGCTTGTTGGCTATG+GGG 0.490238 5_4:-45127724 Msa0853310:CDS
TCGCCTTAGGCAAGAAACTC+TGG 0.493881 5_4:-45117086 Msa0853310:three_prime_UTR
TGTCTCGCATCCTAACAATT+AGG 0.495729 5_4:-45117057 Msa0853310:three_prime_UTR
CTTAAGGCTTGCTGGCTATG+GGG 0.498973 5_4:-45122766 Msa0853310:exon
CATAAGTAGCATGGAGAACA+AGG 0.509417 5_4:-45129673 Msa0853310:intron
TTAAGGCTTGCTGGCTATGG+GGG 0.509608 5_4:-45122765 Msa0853310:exon
ATTTAGAAGCTGTGATGGAC+GGG 0.512905 5_4:+45118127 None:intergenic
ACGCCAGAGTTTGTTGCCTA+AGG 0.516758 5_4:+45122822 None:intergenic
CACATAGTCACTTGAAGGAA+TGG 0.522645 5_4:+45129762 None:intergenic
CATTCCTTCAAGTGACTATG+TGG 0.523116 5_4:-45129761 Msa0853310:CDS
TCAAGGCTTGTTGGCTATGG+GGG 0.523504 5_4:-45127723 Msa0853310:CDS
AGATGCACTGTCAATAGGGT+TGG 0.527361 5_4:-45128113 Msa0853310:CDS
ATAACAGAGTTTGTTGCCTA+AGG 0.529419 5_4:+45127780 None:intergenic
GAATCAAAATAACATAATGT+AGG 0.534066 5_4:+45129887 None:intergenic
TTGAAATTGAATATGGACGT+TGG 0.536052 5_4:-45124432 Msa0853310:CDS
TTGAAATTGAATATGGACGT+TGG 0.536052 5_4:-45128630 Msa0853310:CDS
TCAATTGGTCAAGCTGCTCA+AGG 0.536456 5_4:-45127740 Msa0853310:CDS
GTTTAGAAGCTGTGACGGAC+AGG 0.540096 5_4:+45124195 None:intergenic
TTCGCACTCTTAGTTCATTG+TGG 0.540430 5_4:-45127685 Msa0853310:CDS
TATTCAAGAACCTGTTCCTA+AGG 0.542554 5_4:-45129500 Msa0853310:intron
TAGATTGAAGCTCATGCAGT+TGG 0.542577 5_4:-45128937 Msa0853310:CDS
CGGAAACTACGGCTTTCAGA+TGG 0.543160 5_4:-45117268 Msa0853310:three_prime_UTR
CGGAAACTACGGCTTTCAGA+TGG 0.543160 5_4:-45128038 Msa0853310:CDS
TGGAAACTATGGCTTTCAGA+TGG 0.549894 5_4:-45123395 Msa0853310:CDS
TATACATTTAGAATTTGTGA+TGG 0.550755 5_4:+45128388 None:intergenic
AATGAAAGCAGAAGCTGCAA+AGG 0.552723 5_4:-45128488 Msa0853310:CDS
TTCGCACTCTTAGTTCATAG+TGG 0.553991 5_4:-45122727 Msa0853310:three_prime_UTR
AGAAACAGTTTATTGGATGT+CGG 0.555658 5_4:-45128775 Msa0853310:CDS
TTGAAATCGAATATGGACGT+TGG 0.555754 5_4:-45118364 Msa0853310:three_prime_UTR
TATATTTAATCTCTGGCGCA+TGG 0.556144 5_4:-45124258 Msa0853310:CDS
TCTATTTAATCTCTGGCGCA+TGG 0.556554 5_4:-45118190 Msa0853310:three_prime_UTR
GCTGAAGATGCTCTAACAGA+AGG 0.557253 5_4:-45123442 Msa0853310:CDS
CATTTAGAAGCTGTGATGGA+CGG 0.567145 5_4:+45118126 None:intergenic
GCCGTAGTTTCCGAAATCCA+AGG 0.586415 5_4:+45117278 None:intergenic
GCCGTAGTTTCCGAAATCCA+AGG 0.586415 5_4:+45128048 None:intergenic
GAAGATGAACATAAGTAGCA+TGG 0.592197 5_4:-45129682 Msa0853310:CDS
ATGAACTAAGAGTGCGAAGA+CGG 0.595641 5_4:+45122732 None:intergenic
CGTTGGATTGAAGAGCGAGA+TGG 0.597711 5_4:-45118347 Msa0853310:three_prime_UTR
GCGCGGCTGCTCGAAAATGT+CGG 0.599361 5_4:-45129071 Msa0853310:CDS
CTGAAGATGCTCTAACAGAA+GGG 0.600192 5_4:-45123441 Msa0853310:CDS
AGCATCTTCAGCTTCAAGAG+AGG 0.602027 5_4:+45117359 None:intergenic
AGCATCTTCAGCTTGAAGAG+AGG 0.602027 5_4:+45123453 None:intergenic
ATGGCTGCTGCCATGGACAA+AGG 0.602885 5_4:-45117249 Msa0853310:three_prime_UTR
ATGGCTGCTGCCATGGACAA+AGG 0.602885 5_4:-45128019 Msa0853310:CDS
GTCTCTTGATCATCTCCAGA+AGG 0.603267 5_4:+45129523 None:intergenic
ATCTGGTGTATGGAAATCAC+CGG 0.603625 5_4:-45128446 Msa0853310:CDS
GTTGGATTGAAGAACAAGAT+CGG 0.606769 5_4:-45124414 Msa0853310:CDS
TGCCATGGACAAAGGAGAAG+TGG 0.608422 5_4:-45117241 Msa0853310:three_prime_UTR
TGTACATTTAGAAGCTGTGA+TGG 0.615091 5_4:+45118122 None:intergenic
CAGCTTCAAGAGAGGATAAG+CGG 0.629893 5_4:+45117367 None:intergenic
CCGTAGTTTCCGAAATCCAA+GGG 0.636532 5_4:+45117279 None:intergenic
CCGTAGTTTCCGAAATCCAA+GGG 0.636532 5_4:+45128049 None:intergenic
GCTGAAGATGCTCTAACACA+AGG 0.645757 5_4:-45117348 Msa0853310:three_prime_UTR
CCTTCAAGTGACTATGTGGG+AGG 0.650193 5_4:-45129757 Msa0853310:CDS
TGTACGTTTAGAAGCTGTGA+CGG 0.653567 5_4:+45124190 None:intergenic
CTCTGGCGCATGGAAAACAT+CGG 0.663461 5_4:-45118180 Msa0853310:three_prime_UTR
ATTCCTTCAAGTGACTATGT+GGG 0.664208 5_4:-45129760 Msa0853310:CDS
CTTCAAGAGAGGATAAGCGG+AGG 0.676532 5_4:+45117370 None:intergenic
CTTGCTGAGATGATAAACGC+AGG 0.683767 5_4:+45128140 None:intergenic
CCATAGTTTCCAAAATCTAG+CGG 0.686392 5_4:+45123406 None:intergenic
ACGTCCGGAACAATAAACTC+CGG 0.689265 5_4:-45128742 Msa0853310:intron
TATGTTCATCTTCAACATTG+GGG 0.698417 5_4:+45129692 None:intergenic
CTGAAGATGCTCTAACACAA+GGG 0.706159 5_4:-45117347 Msa0853310:three_prime_UTR
ACGTCAAGCACAGAATCGCG+CGG 0.719929 5_4:-45129088 Msa0853310:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATATAAATTAAATTAT+AGG + chr5_4:45121368-45121387 None:intergenic 0.0%
!!! ATTTTTTAAATAAATTTTAA+AGG - chr5_4:45122058-45122077 Msa0853310:intron 0.0%
!!! TTTTTTAAATAAATTTTAAA+GGG - chr5_4:45122059-45122078 Msa0853310:intron 0.0%
!! ATCAATATAAAATCATAATT+TGG - chr5_4:45119029-45119048 Msa0853310:intron 10.0%
!! ATTTCTTCAATATATATATA+TGG - chr5_4:45119439-45119458 Msa0853310:intron 10.0%
!! ATAAGTAATTACAAAATAAA+TGG + chr5_4:45122432-45122451 None:intergenic 10.0%
!!! ATATAAATTTCAGTTTTATT+AGG - chr5_4:45122932-45122951 Msa0853310:intron 10.0%
!!! TTGATTTTTTTTCTTTTTAT+GGG + chr5_4:45126420-45126439 None:intergenic 10.0%
!!! TTTGATTTTTTTTCTTTTTA+TGG + chr5_4:45126421-45126440 None:intergenic 10.0%
!!! TTGTAAATTAAATTGATTTT+TGG + chr5_4:45125560-45125579 None:intergenic 10.0%
!! AAAAAGAGAAAATTAAAACT+TGG + chr5_4:45117080-45117099 None:intergenic 15.0%
!! AGTAGAAAAAATTGAAATAA+CGG - chr5_4:45117535-45117554 Msa0853310:intron 15.0%
!!! AATTAATTTTTTTTGACAGA+AGG + chr5_4:45117806-45117825 None:intergenic 15.0%
!! GTTGTAAAAATTGAATTTAT+AGG - chr5_4:45117958-45117977 Msa0853310:intron 15.0%
!! TAAAAATTGAATTTATAGGA+AGG - chr5_4:45117962-45117981 Msa0853310:intron 15.0%
!! AAAAAGATAATAGTAATTAG+TGG + chr5_4:45118633-45118652 None:intergenic 15.0%
!!! ATTTAACTTTGTTTTATCTT+TGG - chr5_4:45119900-45119919 Msa0853310:intron 15.0%
!!! TTAAAAGCATGTTAAAATAA+AGG + chr5_4:45120124-45120143 None:intergenic 15.0%
!!! TTTTGTTATTAATTTGATAG+TGG + chr5_4:45120345-45120364 None:intergenic 15.0%
!! ACTATCAAATTAATAACAAA+AGG - chr5_4:45120344-45120363 Msa0853310:intron 15.0%
!!! TTACTATTAACAATTTTCTT+CGG - chr5_4:45121188-45121207 Msa0853310:intron 15.0%
!!! AACGGTTAAATTTTAAAATA+TGG - chr5_4:45122201-45122220 Msa0853310:intron 15.0%
!!! ACGGTTAAATTTTAAAATAT+GGG - chr5_4:45122202-45122221 Msa0853310:intron 15.0%
!! AAATTCCTTTAGATATTATT+TGG - chr5_4:45123239-45123258 Msa0853310:intron 15.0%
!! AATTCCTTTAGATATTATTT+GGG - chr5_4:45123240-45123259 Msa0853310:intron 15.0%
!!! ATTGTTAAATTATCATGTTT+TGG - chr5_4:45123316-45123335 Msa0853310:intron 15.0%
!! ATAGTATTACTATTGTAATA+GGG + chr5_4:45123850-45123869 None:intergenic 15.0%
!! TATAGTATTACTATTGTAAT+AGG + chr5_4:45123851-45123870 None:intergenic 15.0%
!! TATTTCAATTTGATTCAATA+TGG + chr5_4:45123993-45124012 None:intergenic 15.0%
!! TATGTATAAAGTTTAAGAAT+TGG - chr5_4:45125744-45125763 Msa0853310:intron 15.0%
!!! AAACTATTTTGAATTATTAG+AGG - chr5_4:45127513-45127532 Msa0853310:intron 15.0%
!! GAATCAAAATAACATAATGT+AGG + chr5_4:45117110-45117129 None:intergenic 20.0%
!!! AGATATGACTTTTCTTTTTA+TGG - chr5_4:45117139-45117158 Msa0853310:intron 20.0%
!!! GAATTTCTATTTTGTTTCTA+TGG - chr5_4:45117359-45117378 Msa0853310:three_prime_UTR 20.0%
!!! ATAGTTTTAACATAGTATCA+TGG - chr5_4:45117766-45117785 Msa0853310:intron 20.0%
!! TTTATATAAAATAGAGGAAG+AGG + chr5_4:45118142-45118161 None:intergenic 20.0%
!! TTTATACAGAAACAGTTTAT+TGG - chr5_4:45118212-45118231 Msa0853310:three_prime_UTR 20.0%
!!! TCTTTGTTTGAAATTGAATA+TGG - chr5_4:45118357-45118376 Msa0853310:three_prime_UTR 20.0%
!!! TATACATTTAGAATTTGTGA+TGG + chr5_4:45118609-45118628 None:intergenic 20.0%
!!! TTCATTTGTTATTTTTGAGA+TGG - chr5_4:45119760-45119779 Msa0853310:intron 20.0%
!! TATTTACTACTATAAACACT+TGG - chr5_4:45119846-45119865 Msa0853310:intron 20.0%
!! TTTGTATAAGTTCTTCTAAA+AGG + chr5_4:45119876-45119895 None:intergenic 20.0%
!! TATATTTAAACTTCTTTGGA+TGG + chr5_4:45120046-45120065 None:intergenic 20.0%
!! ACACTATATTTAAACTTCTT+TGG + chr5_4:45120050-45120069 None:intergenic 20.0%
!!! ATTTTACACTTTCAAGTATT+TGG + chr5_4:45120214-45120233 None:intergenic 20.0%
!!! TCATTTTAATAGAAACAACT+AGG + chr5_4:45120425-45120444 None:intergenic 20.0%
!! TTATTCACAACAATGATATT+TGG - chr5_4:45120539-45120558 Msa0853310:intron 20.0%
!! AAAAAGATCTTAATGCTTAA+AGG - chr5_4:45120631-45120650 Msa0853310:intron 20.0%
!! TGGATTATGTCATAAATAAA+AGG + chr5_4:45120961-45120980 None:intergenic 20.0%
!!! TTAGTATTTTTGTGTTTTTG+CGG - chr5_4:45121623-45121642 Msa0853310:intron 20.0%
!! GTTTGAATTATGTGATTAAA+GGG - chr5_4:45121662-45121681 Msa0853310:intron 20.0%
!! TTTGAATTATGTGATTAAAG+GGG - chr5_4:45121663-45121682 Msa0853310:intron 20.0%
!! GTTATGTTACTATATTTCTT+CGG + chr5_4:45121728-45121747 None:intergenic 20.0%
!!! ATATTTTAACATACTAGCAT+TGG - chr5_4:45121759-45121778 Msa0853310:intron 20.0%
!! ATTCACAAAATAGTGAAAAT+AGG + chr5_4:45121965-45121984 None:intergenic 20.0%
!!! ATTTTCACTATTTTGTGAAT+TGG - chr5_4:45121965-45121984 Msa0853310:intron 20.0%
!!! ACTGCCATATTTTAAAATAA+GGG + chr5_4:45121993-45122012 None:intergenic 20.0%
!!! AACTGCCATATTTTAAAATA+AGG + chr5_4:45121994-45122013 None:intergenic 20.0%
!!! ATTTTAAAATATGGCAGTTT+TGG - chr5_4:45121995-45122014 Msa0853310:intron 20.0%
!!! AATTTTTTTTCAACCTTCAA+TGG - chr5_4:45122335-45122354 Msa0853310:intron 20.0%
!!! ACTTATTTCAAGTTTAGATA+TGG - chr5_4:45122452-45122471 Msa0853310:intron 20.0%
!! TCTTTATTATTGTATAAAGC+AGG - chr5_4:45122528-45122547 Msa0853310:intron 20.0%
!! CTTTATTATTGTATAAAGCA+GGG - chr5_4:45122529-45122548 Msa0853310:intron 20.0%
!!! TCTTTGTTTGAAATTGAATA+TGG - chr5_4:45118357-45118376 Msa0853310:three_prime_UTR 20.0%
!!! TTCTGAAAAAATTTGAGTAT+TGG + chr5_4:45122686-45122705 None:intergenic 20.0%
!! AAAAACGGAAAACATAAAAT+TGG + chr5_4:45123160-45123179 None:intergenic 20.0%
!! ATAACGAACGAAATTAAAAA+CGG + chr5_4:45123175-45123194 None:intergenic 20.0%
!! ATTCCTTTAGATATTATTTG+GGG - chr5_4:45123241-45123260 Msa0853310:intron 20.0%
!!! ACAACAAATATTTTTTCACT+AGG + chr5_4:45123392-45123411 None:intergenic 20.0%
!!! AAATATTTGTTGTTCTTGTA+TGG - chr5_4:45123399-45123418 Msa0853310:CDS 20.0%
!! GTAATGTAACATCAAAATTT+GGG - chr5_4:45123669-45123688 Msa0853310:intron 20.0%
!! ATATCTATTCAACTATATAG+TGG + chr5_4:45123777-45123796 None:intergenic 20.0%
!! ATTCCATAGAAAATTGATTA+AGG + chr5_4:45124710-45124729 None:intergenic 20.0%
!!! AATCAATTTTCTATGGAATT+TGG - chr5_4:45124711-45124730 Msa0853310:intron 20.0%
!!! ATCAATTTTCTATGGAATTT+GGG - chr5_4:45124712-45124731 Msa0853310:intron 20.0%
!! TGTTGTCAAAGTAAAATAAT+TGG - chr5_4:45124985-45125004 Msa0853310:intron 20.0%
!! AATAATTGGTTACAATAAAC+TGG - chr5_4:45124999-45125018 Msa0853310:intron 20.0%
!!! TGTTATATAACTTTCAGTTT+TGG - chr5_4:45125072-45125091 Msa0853310:intron 20.0%
!!! TTTTTTTTCTTTTTATGGGT+AGG + chr5_4:45126416-45126435 None:intergenic 20.0%
!! AGAAAAAAAATCAAAACAAC+AGG - chr5_4:45126426-45126445 Msa0853310:intron 20.0%
!! AGTGATAAATTTCAAATCTA+CGG - chr5_4:45126768-45126787 Msa0853310:intron 20.0%
!! AAACAATACATTAAGTTTGA+AGG + chr5_4:45126857-45126876 None:intergenic 20.0%
!!! AAGTTATTTTGTTTATTGTG+TGG + chr5_4:45127770-45127789 None:intergenic 20.0%
!!! ATCGATTTTATATGGAAATT+GGG + chr5_4:45128052-45128071 None:intergenic 20.0%
!! AATTTGAACTTGAATGAATT+CGG + chr5_4:45128471-45128490 None:intergenic 20.0%
!!! TCTTTATTTGAAATCGAATA+TGG - chr5_4:45128623-45128642 Msa0853310:CDS 20.0%
!! TATTCAATCATTACTAGAAA+AGG - chr5_4:45129188-45129207 Msa0853310:intron 20.0%
!! TGAATTAAAGGATGAAAATT+TGG - chr5_4:45129212-45129231 Msa0853310:intron 20.0%
!! AGAAGCAGAAAAAATAAAAT+TGG + chr5_4:45129303-45129322 None:intergenic 20.0%
!! ATTGTTAAATTATCATCTCT+TGG - chr5_4:45129405-45129424 Msa0853310:intron 20.0%
!!! GAAAAATATTTTTTCACTAG+TGG + chr5_4:45129478-45129497 None:intergenic 20.0%
!! AAGACTATATAACAATTACT+AGG + chr5_4:45129500-45129519 None:intergenic 20.0%
! TTATGTTCATCTTCAACATT+GGG + chr5_4:45117306-45117325 None:intergenic 25.0%
!! TGATGTAATTTTATCACCTT+AGG + chr5_4:45117513-45117532 None:intergenic 25.0%
! TTAAAGAGAATTGTTTAGCT+TGG - chr5_4:45117824-45117843 Msa0853310:intron 25.0%
! GTTTCTCAATATCTATGTAT+AGG - chr5_4:45117876-45117895 Msa0853310:intron 25.0%
!!! AAGGATGACGATTTTTTATA+TGG + chr5_4:45118118-45118137 None:intergenic 25.0%
! TTATCAATATTTATCCTTGC+AGG - chr5_4:45118188-45118207 Msa0853310:three_prime_UTR 25.0%
! TATCAATATTTATCCTTGCA+GGG - chr5_4:45118189-45118208 Msa0853310:three_prime_UTR 25.0%
! TACAATTATCAATCACTAAC+CGG + chr5_4:45118274-45118293 None:intergenic 25.0%
!! TTCTGAAAAGATTTGAGTAT+TGG + chr5_4:45118488-45118507 None:intergenic 25.0%
!! GATGTTTTCCATTTAATATC+TGG - chr5_4:45118531-45118550 Msa0853310:intron 25.0%
! ATCTGTAAGAAAAAGTCAAA+TGG + chr5_4:45118780-45118799 None:intergenic 25.0%
! TCATTCAAATTCTCAAGTTT+CGG + chr5_4:45118810-45118829 None:intergenic 25.0%
! CGAAATAACTTATACATGAA+CGG - chr5_4:45119927-45119946 Msa0853310:intron 25.0%
! TTTCTTTAACTAGTGTATCA+GGG + chr5_4:45120182-45120201 None:intergenic 25.0%
! GCAGTGTATAAAGAATAAAA+AGG + chr5_4:45120403-45120422 None:intergenic 25.0%
!!! TTCTTCATTTTTAACTGATG+TGG + chr5_4:45120598-45120617 None:intergenic 25.0%
! TAGATAGATTCGTTTCATAT+TGG - chr5_4:45121046-45121065 Msa0853310:intron 25.0%
! AAAGAAATCAACCTATGAAT+TGG + chr5_4:45121087-45121106 None:intergenic 25.0%
! TTAAATCTACTTGTTTCCAA+GGG + chr5_4:45121281-45121300 None:intergenic 25.0%
! ATTATAGGAAGAAATAAGCA+TGG + chr5_4:45121353-45121372 None:intergenic 25.0%
! ATATTAAAATTTCTGCATGC+AGG - chr5_4:45121413-45121432 Msa0853310:intron 25.0%
! GGTTTGAATTATGTGATTAA+AGG - chr5_4:45121661-45121680 Msa0853310:intron 25.0%
!!! AGTCTTGATTGTTTCTATTA+GGG + chr5_4:45121923-45121942 None:intergenic 25.0%
!!! AAGTCTTGATTGTTTCTATT+AGG + chr5_4:45121924-45121943 None:intergenic 25.0%
!!! CTGCCATATTTTAAAATAAG+GGG + chr5_4:45121992-45122011 None:intergenic 25.0%
!! GATTGTCTTAATTGCATTTT+TGG + chr5_4:45122261-45122280 None:intergenic 25.0%
! GATGCTTTATATTTAATCTC+TGG - chr5_4:45122729-45122748 Msa0853310:three_prime_UTR 25.0%
! TTGAAACAGATTAAGATTAG+TGG + chr5_4:45122831-45122850 None:intergenic 25.0%
! TAACTACCATATTGAATTAC+AGG - chr5_4:45122878-45122897 Msa0853310:intron 25.0%
! AACTACCATATTGAATTACA+GGG - chr5_4:45122879-45122898 Msa0853310:intron 25.0%
!! GTGAATATGTCTCATTTTAA+AGG - chr5_4:45122903-45122922 Msa0853310:intron 25.0%
!!! TATGTCTCATTTTAAAGGTT+TGG - chr5_4:45122908-45122927 Msa0853310:intron 25.0%
! ATAAAATTGGTCATCACAAT+TGG + chr5_4:45123147-45123166 None:intergenic 25.0%
!! TAGAAGAGATTTTATGACAT+CGG - chr5_4:45123345-45123364 Msa0853310:intron 25.0%
!!! ACAAATATTTTTTCACTAGG+CGG + chr5_4:45123389-45123408 None:intergenic 25.0%
!!! AATTTTGATGTTACATTACC+TGG + chr5_4:45123668-45123687 None:intergenic 25.0%
! GGTAATGTAACATCAAAATT+TGG - chr5_4:45123668-45123687 Msa0853310:intron 25.0%
!!! GTAATAGGGTTTTGAAAAAA+AGG + chr5_4:45123836-45123855 None:intergenic 25.0%
! TTGGGAATAAAAGTTTGTAT+AGG + chr5_4:45123876-45123895 None:intergenic 25.0%
! TTGATTCAATATGGATTCTA+AGG + chr5_4:45123984-45124003 None:intergenic 25.0%
!! GTTCCTTAATCAATTTTCTA+TGG - chr5_4:45124704-45124723 Msa0853310:intron 25.0%
! TAATTGCTTAGTTACTATCA+TGG - chr5_4:45124950-45124969 Msa0853310:intron 25.0%
! CTGAAAAATATGGTAACATA+TGG + chr5_4:45125144-45125163 None:intergenic 25.0%
!! CATATGTTACCATATTTTTC+AGG - chr5_4:45125142-45125161 Msa0853310:intron 25.0%
! TGTTTCATTCCTGAAAAATA+TGG + chr5_4:45125154-45125173 None:intergenic 25.0%
! AAAATGAAGATGAAACTTGT+TGG - chr5_4:45125297-45125316 Msa0853310:intron 25.0%
! CAAAAACATAAAAGCCTAAA+AGG + chr5_4:45125356-45125375 None:intergenic 25.0%
! ATAAAGTTTAAGAATTGGAG+TGG - chr5_4:45125749-45125768 Msa0853310:intron 25.0%
!!! TTCTGCACTTTTTTTAAATC+TGG - chr5_4:45125820-45125839 Msa0853310:intron 25.0%
! TAATGTGAAACTGTGATTTA+CGG - chr5_4:45125964-45125983 Msa0853310:intron 25.0%
! GTTATTTATGCATGTGTAAT+CGG + chr5_4:45126223-45126242 None:intergenic 25.0%
! TTCTATACATGTACTTTGAA+TGG + chr5_4:45126670-45126689 None:intergenic 25.0%
! AAAGTACATGTATAGAAACA+TGG - chr5_4:45126673-45126692 Msa0853310:intron 25.0%
! AAGTACATGTATAGAAACAT+GGG - chr5_4:45126674-45126693 Msa0853310:intron 25.0%
!! TATTTAGAACAACATTTGCA+AGG - chr5_4:45127377-45127396 Msa0853310:intron 25.0%
! TTCTGATTTAGCTAGAAAAT+TGG + chr5_4:45127416-45127435 None:intergenic 25.0%
!! GCTAAATCAGAATTTAACTT+TGG - chr5_4:45127424-45127443 Msa0853310:intron 25.0%
! AGATAAATCACATGGTAATT+AGG - chr5_4:45127710-45127729 Msa0853310:CDS 25.0%
!! ATATCTTTTATCTGGTGATA+TGG + chr5_4:45127740-45127759 None:intergenic 25.0%
!!! CATCGATTTTATATGGAAAT+TGG + chr5_4:45128053-45128072 None:intergenic 25.0%
! TTTCCATATAAAATCGATGT+AGG - chr5_4:45128054-45128073 Msa0853310:CDS 25.0%
!!! AATTACAGAGGTTTTTGATT+TGG - chr5_4:45128259-45128278 Msa0853310:intron 25.0%
!!! ATTACAGAGGTTTTTGATTT+GGG - chr5_4:45128260-45128279 Msa0853310:intron 25.0%
! GATTACGTGTAAAAAAAATC+TGG + chr5_4:45128304-45128323 None:intergenic 25.0%
! ATTCGGATAAAATACATGTT+TGG + chr5_4:45128454-45128473 None:intergenic 25.0%
!! AATTTCTCATCTCTATTTCT+AGG + chr5_4:45128539-45128558 None:intergenic 25.0%
! TAGAAATAGAGATGAGAAAT+TGG - chr5_4:45128538-45128557 Msa0853310:CDS 25.0%
!! GATGTTTTCTATTTAATCTC+TGG - chr5_4:45128797-45128816 Msa0853310:intron 25.0%
!! GGTTATTTCACAAAATTATG+CGG + chr5_4:45128983-45129002 None:intergenic 25.0%
!!! GAATTGAAGTATCATTTTGA+AGG - chr5_4:45129025-45129044 Msa0853310:intron 25.0%
! AGTAATGATTGAATATCAGA+CGG + chr5_4:45129183-45129202 None:intergenic 25.0%
! ACTAGAAAAGGTTGAATTAA+AGG - chr5_4:45129200-45129219 Msa0853310:intron 25.0%
! GAAAATTTGGAGATGAAAAA+AGG - chr5_4:45129225-45129244 Msa0853310:intron 25.0%
!! ATAAAATTGGTGATCACATT+TGG + chr5_4:45129290-45129309 None:intergenic 25.0%
! AGAAAAAGTTGAAATAACAG+CGG + chr5_4:45129331-45129350 None:intergenic 25.0%
! ATGTTATAAAATCTGTTACG+AGG + chr5_4:45129434-45129453 None:intergenic 25.0%
! TACATTACCTGGATTATAAA+AGG + chr5_4:45129784-45129803 None:intergenic 25.0%
! AGAAAGAAAGACATTTAACT+TGG + chr5_4:45129876-45129895 None:intergenic 25.0%
! TCATACATGTTCATCCTTTT+CGG + chr5_4:45117211-45117230 None:intergenic 30.0%
TATGTTCATCTTCAACATTG+GGG + chr5_4:45117305-45117324 None:intergenic 30.0%
CTTATGTTCATCTTCAACAT+TGG + chr5_4:45117307-45117326 None:intergenic 30.0%
! AATTTTATCACCTTAGGAAC+AGG + chr5_4:45117507-45117526 None:intergenic 30.0%
AAAGACGAGAAAAATAACAC+TGG - chr5_4:45117566-45117585 Msa0853310:intron 30.0%
TTTGTATGTTTGTGATTCAC+AGG - chr5_4:45118009-45118028 Msa0853310:intron 30.0%
TATCGAGAAAACAAGAAAAC+AGG - chr5_4:45118087-45118106 Msa0853310:intron 30.0%
ATAAAATAGAGGAAGAGGTA+AGG + chr5_4:45118137-45118156 None:intergenic 30.0%
AGAAACAGTTTATTGGATGT+CGG - chr5_4:45118219-45118238 Msa0853310:three_prime_UTR 30.0%
! TTTATTGGATGTCGGTTATA+TGG - chr5_4:45118227-45118246 Msa0853310:three_prime_UTR 30.0%
! TTATTGGATGTCGGTTATAT+GGG - chr5_4:45118228-45118247 Msa0853310:three_prime_UTR 30.0%
TTGAAATTGAATATGGACGT+TGG - chr5_4:45118364-45118383 Msa0853310:three_prime_UTR 30.0%
TCCATTTAATATCTGGTGTA+TGG - chr5_4:45118538-45118557 Msa0853310:intron 30.0%
TCCATACACCAGATATTAAA+TGG + chr5_4:45118542-45118561 None:intergenic 30.0%
!! AGTAGAAGGTTTTGTAATTC+AGG - chr5_4:45119004-45119023 Msa0853310:intron 30.0%
TGTGTATTAGAATTCAAACG+TGG - chr5_4:45119106-45119125 Msa0853310:intron 30.0%
GTGTATTAGAATTCAAACGT+GGG - chr5_4:45119107-45119126 Msa0853310:intron 30.0%
!! CTTAATTTGAGTGTTGAGTA+GGG + chr5_4:45119361-45119380 None:intergenic 30.0%
!! TCTTAATTTGAGTGTTGAGT+AGG + chr5_4:45119362-45119381 None:intergenic 30.0%
ATGATGCAAAGTTCATACTA+CGG - chr5_4:45119492-45119511 Msa0853310:intron 30.0%
TGAAAAGTAAACGTCACAAA+AGG + chr5_4:45119744-45119763 None:intergenic 30.0%
CCAAAGAGATATTCTTGATA+GGG + chr5_4:45119809-45119828 None:intergenic 30.0%
TCCAAAGAGATATTCTTGAT+AGG + chr5_4:45119810-45119829 None:intergenic 30.0%
GGTTAAAGAACTCATAGAAA+AGG + chr5_4:45120025-45120044 None:intergenic 30.0%
GTTTCTTTAACTAGTGTATC+AGG + chr5_4:45120183-45120202 None:intergenic 30.0%
ATATATCAACTACTTGTGAG+TGG - chr5_4:45120313-45120332 Msa0853310:intron 30.0%
TCTTAATGCTTAAAGGTAGT+AGG - chr5_4:45120638-45120657 Msa0853310:intron 30.0%
CAAAGGAAACAACTAAAAGT+TGG + chr5_4:45120981-45121000 None:intergenic 30.0%
!! CAACTTTTAGTTGTTTCCTT+TGG - chr5_4:45120979-45120998 Msa0853310:intron 30.0%
TCAATTGATTACCTCAAGAA+AGG + chr5_4:45121238-45121257 None:intergenic 30.0%
CTTAAATCTACTTGTTTCCA+AGG + chr5_4:45121282-45121301 None:intergenic 30.0%
! GCAATTGTAACTTTGAAAAC+AGG - chr5_4:45121307-45121326 Msa0853310:intron 30.0%
! AAGCATGGTGATTTTATAGT+TGG + chr5_4:45121338-45121357 None:intergenic 30.0%
TGCAATTGAAGTAAACTGAA+TGG - chr5_4:45121575-45121594 Msa0853310:intron 30.0%
!! TATTTTTGTGTTTTTGCGGT+TGG - chr5_4:45121627-45121646 Msa0853310:intron 30.0%
!! ATTTTTGTGTTTTTGCGGTT+GGG - chr5_4:45121628-45121647 Msa0853310:intron 30.0%
TTATGTGATTAAAGGGGTTT+AGG - chr5_4:45121669-45121688 Msa0853310:intron 30.0%
CATGTACATAAATGAAAGAG+AGG + chr5_4:45121843-45121862 None:intergenic 30.0%
CACAAAATAGTGAAAATAGG+AGG + chr5_4:45121962-45121981 None:intergenic 30.0%
!!! GGTCCCCTTATTTTAAAATA+TGG - chr5_4:45121986-45122005 Msa0853310:intron 30.0%
TTAGACCAAATATCGAAAGA+AGG + chr5_4:45122022-45122041 None:intergenic 30.0%
!!! TTTTTAGTTCAAAACCACGA+TGG - chr5_4:45122169-45122188 Msa0853310:intron 30.0%
! TTTTCACCATTTTGTGGTAT+TGG + chr5_4:45122230-45122249 None:intergenic 30.0%
TACCACAAAATGGTGAAAAT+AGG - chr5_4:45122231-45122250 Msa0853310:intron 30.0%
ACCACAAAATGGTGAAAATA+GGG - chr5_4:45122232-45122251 Msa0853310:intron 30.0%
TCAAGTTTAGATATGGATGA+TGG - chr5_4:45122459-45122478 Msa0853310:intron 30.0%
TTGAAATTGAATATGGACGT+TGG - chr5_4:45118364-45118383 Msa0853310:three_prime_UTR 30.0%
AATTTATAGACGACGGAAAA+AGG - chr5_4:45123082-45123101 Msa0853310:intron 30.0%
CAACCCCAAATAATATCTAA+AGG + chr5_4:45123247-45123266 None:intergenic 30.0%
! CTTTAGATATTATTTGGGGT+TGG - chr5_4:45123245-45123264 Msa0853310:intron 30.0%
AAAGACAAGTAGTTTCTACA+AGG + chr5_4:45123445-45123464 None:intergenic 30.0%
!! AGTAGAAAGTTTTGTAATCC+AGG - chr5_4:45123647-45123666 Msa0853310:intron 30.0%
AAAGGTTTGTGACTGTAATT+TGG + chr5_4:45123818-45123837 None:intergenic 30.0%
GGTTGAGACAAAAAAAAAAG+AGG + chr5_4:45123912-45123931 None:intergenic 30.0%
!! AGGAATAGTTTGTTATTACG+TGG + chr5_4:45124076-45124095 None:intergenic 30.0%
TTGATGTAGGACTAACTATT+AGG + chr5_4:45124096-45124115 None:intergenic 30.0%
AAGAGTGAAACATTTGATGT+AGG + chr5_4:45124109-45124128 None:intergenic 30.0%
! TAATGTTTTCCTTTCTCTAC+AGG - chr5_4:45124142-45124161 Msa0853310:intron 30.0%
AAAGAGAACACAATGGAATT+GGG + chr5_4:45124584-45124603 None:intergenic 30.0%
! AGTGTTTACGCAATGTTTTT+GGG - chr5_4:45124826-45124845 Msa0853310:intron 30.0%
TGGTTCAATATTAATCTACG+TGG - chr5_4:45125180-45125199 Msa0853310:intron 30.0%
!! TAGGCTTTTATGTTTTTGTG+TGG - chr5_4:45125358-45125377 Msa0853310:intron 30.0%
!! ATTTTTGATTGTTCTCTCTC+TGG - chr5_4:45125575-45125594 Msa0853310:intron 30.0%
GTATGTAAGTCTACATTGTA+TGG - chr5_4:45125842-45125861 Msa0853310:intron 30.0%
!!! TATTTTGGTGCCATTTATAC+CGG + chr5_4:45126356-45126375 None:intergenic 30.0%
AATAGAATTTCGAGACATGT+CGG - chr5_4:45126882-45126901 Msa0853310:intron 30.0%
ATAGCATTAACAATGGTCTT+AGG + chr5_4:45126927-45126946 None:intergenic 30.0%
AGAGAAGATAGCATTAACAA+TGG + chr5_4:45126934-45126953 None:intergenic 30.0%
ATGCTTATGAAACTGATAAG+AGG + chr5_4:45127015-45127034 None:intergenic 30.0%
TCTTCTTATGTAACAGATCA+TGG + chr5_4:45127120-45127139 None:intergenic 30.0%
TCAAATAAGTCAATCGAAAC+AGG + chr5_4:45127326-45127345 None:intergenic 30.0%
! GTTGTTCTAAATAGTCTCAT+AGG + chr5_4:45127370-45127389 None:intergenic 30.0%
TTGAATTATTAGAGGTCAGT+AGG - chr5_4:45127521-45127540 Msa0853310:intron 30.0%
! TGAAATTTACTTGTTACGCT+TGG + chr5_4:45127589-45127608 None:intergenic 30.0%
TATAAGATGAATCCCTATGT+GGG + chr5_4:45127621-45127640 None:intergenic 30.0%
ATATAAGATGAATCCCTATG+TGG + chr5_4:45127622-45127641 None:intergenic 30.0%
TAGGGATTCATCTTATATGT+AGG - chr5_4:45127624-45127643 Msa0853310:intron 30.0%
ATTTACGCAGATAAATCACA+TGG - chr5_4:45127702-45127721 Msa0853310:CDS 30.0%
! GTTCCTCTAAAAAAAATTGC+AGG - chr5_4:45127893-45127912 Msa0853310:intron 30.0%
!!! TTGCCTGCAATTTTTTTTAG+AGG + chr5_4:45127899-45127918 None:intergenic 30.0%
!!! ATTTTTGGTTGTTCTCTTTC+TGG + chr5_4:45127982-45128001 None:intergenic 30.0%
!!! CTTCCTACATCGATTTTATA+TGG + chr5_4:45128060-45128079 None:intergenic 30.0%
!!! TTACAGAGGTTTTTGATTTG+GGG - chr5_4:45128261-45128280 Msa0853310:intron 30.0%
ACGTAATCAAACATGTCATT+CGG - chr5_4:45128316-45128335 Msa0853310:intron 30.0%
! TGTTTTACATATGAACCAGT+AGG - chr5_4:45128380-45128399 Msa0853310:intron 30.0%
! GTTTTACATATGAACCAGTA+GGG - chr5_4:45128381-45128400 Msa0853310:intron 30.0%
! TTTTACATATGAACCAGTAG+GGG - chr5_4:45128382-45128401 Msa0853310:intron 30.0%
GGATAAAATACATGTTTGGT+TGG + chr5_4:45128450-45128469 None:intergenic 30.0%
! TTCTGAAAAGATCTGAGTAT+TGG + chr5_4:45128754-45128773 None:intergenic 30.0%
TTCAAGCAGATTAAGATAAG+TGG + chr5_4:45128899-45128918 None:intergenic 30.0%
! TTCAGTTTTACTAAGAACCA+AGG - chr5_4:45129062-45129081 Msa0853310:CDS 30.0%
GTAATGATTGAATATCAGAC+GGG + chr5_4:45129182-45129201 None:intergenic 30.0%
TGCTAGTATACTATGATATC+TGG + chr5_4:45129354-45129373 None:intergenic 30.0%
CAGGTAATGTAACATCATTT+CGG - chr5_4:45129793-45129812 Msa0853310:CDS 30.0%
ATTCCTTCAAGTGACTATGT+GGG - chr5_4:45117234-45117253 Msa0853310:three_prime_UTR 35.0%
GAAGATGAACATAAGTAGCA+TGG - chr5_4:45117312-45117331 Msa0853310:three_prime_UTR 35.0%
AAGGTTCTCTTGATTCTTGA+GGG + chr5_4:45117455-45117474 None:intergenic 35.0%
TATTCAAGAACCTGTTCCTA+AGG - chr5_4:45117494-45117513 Msa0853310:intron 35.0%
TAGCTTGGAAGAGTTCATAA+TGG - chr5_4:45117839-45117858 Msa0853310:intron 35.0%
!! TGACTTTTTCTTACAGATCG+TGG - chr5_4:45118782-45118801 Msa0853310:intron 35.0%
TATTAGAATTCAAACGTGGG+TGG - chr5_4:45119110-45119129 Msa0853310:intron 35.0%
! GCATTTTTCTTCTTCTTTGC+AGG - chr5_4:45119184-45119203 Msa0853310:intron 35.0%
!! ATAACAGAGTTTGTTGCCTA+AGG + chr5_4:45119217-45119236 None:intergenic 35.0%
ATGTCACGCATCTTATCAAT+TGG - chr5_4:45119239-45119258 Msa0853310:intron 35.0%
GTAGTATGAACTTTGCATCA+TGG + chr5_4:45119493-45119512 None:intergenic 35.0%
CCCTATCAAGAATATCTCTT+TGG - chr5_4:45119806-45119825 Msa0853310:intron 35.0%
TGTCTTCGAACATTAGCTAA+AGG + chr5_4:45120273-45120292 None:intergenic 35.0%
TAATGCTTAAAGGTAGTAGG+TGG - chr5_4:45120641-45120660 Msa0853310:intron 35.0%
ACACTTAAGAGGAAGATTGT+CGG - chr5_4:45120810-45120829 Msa0853310:intron 35.0%
AAAGAGTGATTCGATAGTGA+TGG + chr5_4:45120886-45120905 None:intergenic 35.0%
TTGATGTACACGTGTTAAGT+GGG + chr5_4:45120931-45120950 None:intergenic 35.0%
TTTGATGTACACGTGTTAAG+TGG + chr5_4:45120932-45120951 None:intergenic 35.0%
!! TGCTGATTCTACCAATTCAT+AGG - chr5_4:45121073-45121092 Msa0853310:intron 35.0%
TATCTCTCTTTCCTTTCTTG+AGG - chr5_4:45121224-45121243 Msa0853310:intron 35.0%
TTTCTGCATGCAGGTTTATA+AGG - chr5_4:45121422-45121441 Msa0853310:intron 35.0%
TGAAGTCACTGTCAGTAATA+TGG - chr5_4:45121457-45121476 Msa0853310:intron 35.0%
GAAGTCACTGTCAGTAATAT+GGG - chr5_4:45121458-45121477 Msa0853310:intron 35.0%
TTGGTCCTTCTTTCGATATT+TGG - chr5_4:45122014-45122033 Msa0853310:intron 35.0%
! ACCCTATTTTCACCATTTTG+TGG + chr5_4:45122236-45122255 None:intergenic 35.0%
GTTGGATTGAAGAACAAGAT+CGG - chr5_4:45118382-45118401 Msa0853310:three_prime_UTR 35.0%
TATATTTAATCTCTGGCGCA+TGG - chr5_4:45122736-45122755 Msa0853310:three_prime_UTR 35.0%
!! CAAAGAAAAAGGCGTTCTAA+CGG + chr5_4:45122768-45122787 None:intergenic 35.0%
ATCCTCCAAACCAAAGAAAA+AGG + chr5_4:45122779-45122798 None:intergenic 35.0%
TCACTCCCTGTAATTCAATA+TGG + chr5_4:45122887-45122906 None:intergenic 35.0%
GATTGCATATCAAGTAACTC+TGG + chr5_4:45122992-45123011 None:intergenic 35.0%
CGATGACAATTTATAGACGA+CGG - chr5_4:45123075-45123094 Msa0853310:intron 35.0%
!! GTTGTTCTTGTATGGTTTTG+CGG - chr5_4:45123407-45123426 Msa0853310:CDS 35.0%
! GAAAAACTTCCGCTAGATTT+TGG - chr5_4:45123579-45123598 Msa0853310:intron 35.0%
CCATAGTTTCCAAAATCTAG+CGG + chr5_4:45123591-45123610 None:intergenic 35.0%
TACTGCTTCTACTTTGTTCA+TGG + chr5_4:45123631-45123650 None:intergenic 35.0%
ACATAATGTTCACATGACTC+AGG + chr5_4:45123720-45123739 None:intergenic 35.0%
CATTATGTGTAGTCCCAATA+AGG - chr5_4:45123732-45123751 Msa0853310:intron 35.0%
! AGAGGTTACTAGTCTCATTT+GGG + chr5_4:45123894-45123913 None:intergenic 35.0%
! AAGAGGTTACTAGTCTCATT+TGG + chr5_4:45123895-45123914 None:intergenic 35.0%
!!! TTTTTTTTGTCTCAACCCTC+CGG - chr5_4:45123915-45123934 Msa0853310:intron 35.0%
GAAAGAGAACACAATGGAAT+TGG + chr5_4:45124585-45124604 None:intergenic 35.0%
! GTTGATGAAAGAGAACACAA+TGG + chr5_4:45124591-45124610 None:intergenic 35.0%
TATGTTCCAGAAATTGCCAT+AGG - chr5_4:45124796-45124815 Msa0853310:intron 35.0%
CAAAAACATTGCGTAAACAC+TGG + chr5_4:45124827-45124846 None:intergenic 35.0%
! CAGTGTTTACGCAATGTTTT+TGG - chr5_4:45124825-45124844 Msa0853310:intron 35.0%
CATATGGTGAATTGCTGATA+CGG + chr5_4:45125128-45125147 None:intergenic 35.0%
TCAGGAATGAAACAAGTATC+TGG - chr5_4:45125160-45125179 Msa0853310:intron 35.0%
!! AGATGAAACTTGTTGGTGTT+TGG - chr5_4:45125304-45125323 Msa0853310:intron 35.0%
!! TTATGTTTTTGTGTGGTTGC+TGG - chr5_4:45125365-45125384 Msa0853310:intron 35.0%
!!! GCTGTTTCTGTTTTCTGTTT+AGG - chr5_4:45125421-45125440 Msa0853310:intron 35.0%
!!! TATGTTGTTTTTTGTGCAGC+AGG - chr5_4:45125449-45125468 Msa0853310:intron 35.0%
!!! TGGCATTGTTTTGACAGATT+TGG - chr5_4:45125480-45125499 Msa0853310:intron 35.0%
!!! GGCATTGTTTTGACAGATTT+GGG - chr5_4:45125481-45125500 Msa0853310:intron 35.0%
!!! GCATTGTTTTGACAGATTTG+GGG - chr5_4:45125482-45125501 Msa0853310:intron 35.0%
!!! CATTGTTTTGACAGATTTGG+GGG - chr5_4:45125483-45125502 Msa0853310:intron 35.0%
!!! ATTGTTTTGACAGATTTGGG+GGG - chr5_4:45125484-45125503 Msa0853310:intron 35.0%
AGAAACAACACCACAATAAC+AGG + chr5_4:45125517-45125536 None:intergenic 35.0%
TTATGCATGTGTAATCGGTA+AGG + chr5_4:45126218-45126237 None:intergenic 35.0%
CATGCATAAATAACCTGCTA+TGG - chr5_4:45126229-45126248 Msa0853310:intron 35.0%
!!! TGTTGTTTTAGGATGCCTTA+GGG + chr5_4:45126392-45126411 None:intergenic 35.0%
ACATGTACTTTGAATGGTGT+TGG + chr5_4:45126664-45126683 None:intergenic 35.0%
TGGGAATTCTTTCAATGCTT+TGG - chr5_4:45126693-45126712 Msa0853310:intron 35.0%
TAAGTTTGAAGGAAGAGAGT+AGG + chr5_4:45126846-45126865 None:intergenic 35.0%
TATAGTAGCAATCATCTCAG+TGG + chr5_4:45126988-45127007 None:intergenic 35.0%
! CTTTGTTTGCTTGTCTAAGA+CGG - chr5_4:45127209-45127228 Msa0853310:intron 35.0%
CTGCCTGCATTCAAAATAAA+AGG - chr5_4:45127254-45127273 Msa0853310:intron 35.0%
!!! CAGCCTTTTATTTTGAATGC+AGG + chr5_4:45127260-45127279 None:intergenic 35.0%
CTCATAGGTGTTTATAGTAG+TGG + chr5_4:45127355-45127374 None:intergenic 35.0%
! TTTGGTGACAGATAAAAGAG+AGG - chr5_4:45127442-45127461 Msa0853310:intron 35.0%
TTCATTGAAGAAACCCACAT+AGG - chr5_4:45127605-45127624 Msa0853310:intron 35.0%
TCATTGAAGAAACCCACATA+GGG - chr5_4:45127606-45127625 Msa0853310:intron 35.0%
!! TTTTGTTTATTGTGTGGACC+TGG + chr5_4:45127764-45127783 None:intergenic 35.0%
TCAGCACAAACATGAATTGA+AGG - chr5_4:45127866-45127885 Msa0853310:intron 35.0%
CAGCACAAACATGAATTGAA+GGG - chr5_4:45127867-45127886 Msa0853310:intron 35.0%
! TTGGATGTGTTCTGTTGATT+TGG + chr5_4:45127944-45127963 None:intergenic 35.0%
!!! CTGGTTTTAGTCAGTCTTTT+TGG + chr5_4:45127963-45127982 None:intergenic 35.0%
AAAATCGATGTAGGAAGCAA+AGG - chr5_4:45128063-45128082 Msa0853310:CDS 35.0%
CGTAATCAAACATGTCATTC+GGG - chr5_4:45128317-45128336 Msa0853310:intron 35.0%
!! TTTGAATCATCGGTTTGAAC+GGG + chr5_4:45128427-45128446 None:intergenic 35.0%
!! GTTTGAATCATCGGTTTGAA+CGG + chr5_4:45128428-45128447 None:intergenic 35.0%
!! GTTTGGTTGGTTTGAATCAT+CGG + chr5_4:45128437-45128456 None:intergenic 35.0%
!! GGGTTTAAACTGGTTGTTTT+GGG + chr5_4:45128497-45128516 None:intergenic 35.0%
! TTGTCAATTCGGGTTTAAAC+TGG + chr5_4:45128507-45128526 None:intergenic 35.0%
GATGTTCTGATTGTCAATTC+GGG + chr5_4:45128517-45128536 None:intergenic 35.0%
GGATGTTCTGATTGTCAATT+CGG + chr5_4:45128518-45128537 None:intergenic 35.0%
!! GTGCTATTATTTTGTTCAGC+AGG - chr5_4:45128596-45128615 Msa0853310:CDS 35.0%
TTGAAATCGAATATGGACGT+TGG - chr5_4:45128630-45128649 Msa0853310:CDS 35.0%
ATCCTCCAATCCAAAGAAAA+AGG + chr5_4:45128847-45128866 None:intergenic 35.0%
TGTACATTTAGAAGCTGTGA+TGG + chr5_4:45128875-45128894 None:intergenic 35.0%
!!! CAAGTAACTCTAGTTTTGCT+TGG + chr5_4:45129103-45129122 None:intergenic 35.0%
! TCAGTTAAAGCATCAAGCTT+GGG + chr5_4:45129580-45129599 None:intergenic 35.0%
! ATCAGTTAAAGCATCAAGCT+TGG + chr5_4:45129581-45129600 None:intergenic 35.0%
! GGTACAACCTTTTATAATCC+AGG - chr5_4:45129774-45129793 Msa0853310:CDS 35.0%
CGAAATGATGTTACATTACC+TGG + chr5_4:45129795-45129814 None:intergenic 35.0%
!! ACATTTAACTTGGCTGTTGA+AGG + chr5_4:45129866-45129885 None:intergenic 35.0%
AATGTCTTTCTTTCTCTACC+AGG - chr5_4:45129881-45129900 Msa0853310:five_prime_UTR 35.0%
CACATAGTCACTTGAAGGAA+TGG + chr5_4:45117235-45117254 None:intergenic 40.0%
CATTCCTTCAAGTGACTATG+TGG - chr5_4:45117233-45117252 Msa0853310:three_prime_UTR 40.0%
CATAAGTAGCATGGAGAACA+AGG - chr5_4:45117321-45117340 Msa0853310:three_prime_UTR 40.0%
GAAGGTTCTCTTGATTCTTG+AGG + chr5_4:45117456-45117475 None:intergenic 40.0%
CAAGAATCAAGAGAACCTTC+TGG - chr5_4:45117456-45117475 Msa0853310:intron 40.0%
! AAAATGTCGGCTGCGAAAAA+AGG - chr5_4:45117936-45117955 Msa0853310:intron 40.0%
ACAGGCTTATGTTCAACAAC+TGG - chr5_4:45118027-45118046 Msa0853310:intron 40.0%
TAGATTGAAGCTCATGCAGT+TGG - chr5_4:45118057-45118076 Msa0853310:intron 40.0%
GTTTCTGTATAAACCCTGCA+AGG + chr5_4:45118205-45118224 None:intergenic 40.0%
CTAACCGGAGTTTATTGTTC+CGG + chr5_4:45118259-45118278 None:intergenic 40.0%
AATGAAAGCAGAAGCTGCAA+AGG - chr5_4:45118506-45118525 Msa0853310:intron 40.0%
ATCTGGTGTATGGAAATCAC+CGG - chr5_4:45118548-45118567 Msa0853310:intron 40.0%
! GAACGCCTTTTTCTTTGGAT+CGG - chr5_4:45118573-45118592 Msa0853310:intron 40.0%
ATCCTCCGATCCAAAGAAAA+AGG + chr5_4:45118581-45118600 None:intergenic 40.0%
CTGAAGATGCACTGTCAATA+GGG - chr5_4:45118877-45118896 Msa0853310:intron 40.0%
TGTTGTTGATCATACTCTGC+TGG + chr5_4:45118914-45118933 None:intergenic 40.0%
ATCACACATAACATGTGTCG+TGG - chr5_4:45119074-45119093 Msa0853310:intron 40.0%
TTCGCACTCTTAGTTCATTG+TGG - chr5_4:45119309-45119328 Msa0853310:intron 40.0%
! AGTGTTGAGTAGGGTAGAAA+TGG + chr5_4:45119352-45119371 None:intergenic 40.0%
ATGATGTGTCAATTACGCTG+AGG - chr5_4:45119988-45120007 Msa0853310:intron 40.0%
GTGGTGTCTAAATTTCGTAG+AGG - chr5_4:45120668-45120687 Msa0853310:intron 40.0%
TGGATGAACTCACACTTAAG+AGG - chr5_4:45120799-45120818 Msa0853310:intron 40.0%
CGATGTTGTCCAGAATGTTA+AGG - chr5_4:45120837-45120856 Msa0853310:intron 40.0%
AAGGGAACAGAAGAAAGAGT+AGG + chr5_4:45121263-45121282 None:intergenic 40.0%
TACTCTTTCTTCTGTTCCCT+TGG - chr5_4:45121262-45121281 Msa0853310:intron 40.0%
ATATTTCTTCGGACGATACG+AGG + chr5_4:45121717-45121736 None:intergenic 40.0%
TTAGTTCAAAACCACGATGG+AGG - chr5_4:45122172-45122191 Msa0853310:intron 40.0%
TAGTTCAAAACCACGATGGA+GGG - chr5_4:45122173-45122192 Msa0853310:intron 40.0%
TGGGTACCAATACCACAAAA+TGG - chr5_4:45122221-45122240 Msa0853310:intron 40.0%
AAGCAAGCATCATCCATTGA+AGG + chr5_4:45122351-45122370 None:intergenic 40.0%
! CGTTAGAACGCCTTTTTCTT+TGG - chr5_4:45122766-45122785 Msa0853310:exon 40.0%
! GAACGCCTTTTTCTTTGGTT+TGG - chr5_4:45122771-45122790 Msa0853310:exon 40.0%
TGTACGTTTAGAAGCTGTGA+CGG + chr5_4:45122807-45122826 None:intergenic 40.0%
CTGATATTCATTCACCACGA+AGG - chr5_4:45123042-45123061 Msa0853310:intron 40.0%
CTTAGGTACAACGATCTGTA+AGG + chr5_4:45123469-45123488 None:intergenic 40.0%
!! TCAGTTAAAGCATCGAGCTT+AGG + chr5_4:45123486-45123505 None:intergenic 40.0%
CAGCTTGAAGAGAGGATAAA+CGG + chr5_4:45123536-45123555 None:intergenic 40.0%
CTGAAGATGCTCTAACAGAA+GGG - chr5_4:45123553-45123572 Msa0853310:intron 40.0%
!! CCGCTAGATTTTGGAAACTA+TGG - chr5_4:45123588-45123607 Msa0853310:intron 40.0%
TGGAAACTATGGCTTTCAGA+TGG - chr5_4:45123599-45123618 Msa0853310:intron 40.0%
CGCAACTTGGAAACCTTATT+GGG + chr5_4:45123748-45123767 None:intergenic 40.0%
TCGCAACTTGGAAACCTTAT+TGG + chr5_4:45123749-45123768 None:intergenic 40.0%
ATAGTGGCATAATCGCAACT+TGG + chr5_4:45123761-45123780 None:intergenic 40.0%
AAGCATATTTCCCTGAGAAC+CGG + chr5_4:45123937-45123956 None:intergenic 40.0%
TGCTTGTGAGCTTGATAGAA+AGG - chr5_4:45123952-45123971 Msa0853310:intron 40.0%
! ATGAACTAAGAGTGCGAAGA+CGG + chr5_4:45119307-45119326 None:intergenic 40.0%
TTCGCACTCTTAGTTCATAG+TGG - chr5_4:45124267-45124286 Msa0853310:CDS 40.0%
!! CCTAAGTTGAGTGTTGAGTA+GGG + chr5_4:45124319-45124338 None:intergenic 40.0%
!! TCCTAAGTTGAGTGTTGAGT+AGG + chr5_4:45124320-45124339 None:intergenic 40.0%
! ACTTCTCGGGACACTTTTAT+CGG + chr5_4:45124423-45124442 None:intergenic 40.0%
TGTCATGTGCACAGGTAATT+CGG + chr5_4:45124448-45124467 None:intergenic 40.0%
ATATCGCGTGTGATGAATTG+AGG + chr5_4:45124503-45124522 None:intergenic 40.0%
CAATTCTCTCCCTACAAATC+TGG - chr5_4:45124526-45124545 Msa0853310:intron 40.0%
TAAGGAACAGTGACAGCAAA+AGG + chr5_4:45124692-45124711 None:intergenic 40.0%
TCACGATGCATTCATTCACA+AGG - chr5_4:45125216-45125235 Msa0853310:intron 40.0%
!!! CTGTTTTTGTTTTCGTGTGC+TGG - chr5_4:45125397-45125416 Msa0853310:intron 40.0%
AGAATTGGAGTGGTATAGTG+AGG - chr5_4:45125759-45125778 Msa0853310:intron 40.0%
! ATTTGTTGCGTTCAGTTACG+AGG + chr5_4:45126003-45126022 None:intergenic 40.0%
CAACACTTCTTCTCGTCTAT+TGG + chr5_4:45126129-45126148 None:intergenic 40.0%
! CAATAGACGAGAAGAAGTGT+TGG - chr5_4:45126127-45126146 Msa0853310:intron 40.0%
CTGCTATGGTATACCAGAAT+CGG - chr5_4:45126243-45126262 Msa0853310:intron 40.0%
! AATATTGCAGTAGCCGATTC+TGG + chr5_4:45126259-45126278 None:intergenic 40.0%
GGCTACTGCAATATTCACAA+TGG - chr5_4:45126264-45126283 Msa0853310:intron 40.0%
CAAGATATGAGCCTGTAATC+CGG - chr5_4:45126334-45126353 Msa0853310:intron 40.0%
AGCCTGTAATCCGGTATAAA+TGG - chr5_4:45126343-45126362 Msa0853310:intron 40.0%
! TGCCATTTATACCGGATTAC+AGG + chr5_4:45126348-45126367 None:intergenic 40.0%
!!! GGAGCTATGGCTTTGTATTT+TGG + chr5_4:45126371-45126390 None:intergenic 40.0%
!!! CTGTTGTTTTAGGATGCCTT+AGG + chr5_4:45126393-45126412 None:intergenic 40.0%
!!! TATGGGTAGGCTGTTGTTTT+AGG + chr5_4:45126403-45126422 None:intergenic 40.0%
AGCAGCTGAAAAGGAAAACT+AGG + chr5_4:45126452-45126471 None:intergenic 40.0%
! TAGTTTTCCTTTTCAGCTGC+TGG - chr5_4:45126451-45126470 Msa0853310:intron 40.0%
!! TCCCTCTGTTTTGAGCTTTT+GGG + chr5_4:45126539-45126558 None:intergenic 40.0%
GCTTAAAGAATTTCAGCCGA+AGG + chr5_4:45126804-45126823 None:intergenic 40.0%
AGTAGGAGAAATTCTGATGC+TGG + chr5_4:45126829-45126848 None:intergenic 40.0%
AATGCAGGCAGATGCTATAA+GGG + chr5_4:45127245-45127264 None:intergenic 40.0%
! TGGGGAACACTGAATCTTTT+TGG - chr5_4:45127658-45127677 Msa0853310:intron 40.0%
!! ACACTGAATCTTTTTGGCAG+AGG - chr5_4:45127664-45127683 Msa0853310:intron 40.0%
CACCAGATAAAAGATATGCC+AGG - chr5_4:45127743-45127762 Msa0853310:CDS 40.0%
! GACCTGGCATATCTTTTATC+TGG + chr5_4:45127748-45127767 None:intergenic 40.0%
! CGGGTTTAAACTGGTTGTTT+TGG + chr5_4:45128498-45128517 None:intergenic 40.0%
AGCTACTCTCAACAAGTAGA+TGG + chr5_4:45118461-45118480 None:intergenic 40.0%
TCTATTTAATCTCTGGCGCA+TGG - chr5_4:45128804-45128823 Msa0853310:intron 40.0%
! GAGCACCTTTTTCTTTGGAT+TGG - chr5_4:45128839-45128858 Msa0853310:intron 40.0%
!! CACCTTTTTCTTTGGATTGG+AGG - chr5_4:45128842-45128861 Msa0853310:intron 40.0%
!! ATTTAGAAGCTGTGATGGAC+GGG + chr5_4:45128870-45128889 None:intergenic 40.0%
! CATTTAGAAGCTGTGATGGA+CGG + chr5_4:45128871-45128890 None:intergenic 40.0%
ATAACCAGCACATCGAAATG+TGG - chr5_4:45128997-45129016 Msa0853310:intron 40.0%
TAACCAGCACATCGAAATGT+GGG - chr5_4:45128998-45129017 Msa0853310:intron 40.0%
GGAATCTGACAATGTTTCCT+TGG + chr5_4:45129082-45129101 None:intergenic 40.0%
CTGAAGATGCTCTAACACAA+GGG - chr5_4:45129647-45129666 Msa0853310:intron 40.0%
TGTCTCGCATCCTAACAATT+AGG - chr5_4:45129937-45129956 Msa0853310:five_prime_UTR 40.0%
GTCTCTTGATCATCTCCAGA+AGG + chr5_4:45117474-45117493 None:intergenic 45.0%
ACGTCCGGAACAATAAACTC+CGG - chr5_4:45118252-45118271 Msa0853310:three_prime_UTR 45.0%
TCCTGTCATGTTTCGAAGCA+GGG - chr5_4:45118331-45118350 Msa0853310:three_prime_UTR 45.0%
!! CAAAGAAAAAGGCGTTCGAC+CGG + chr5_4:45118570-45118589 None:intergenic 45.0%
TGTCGTGTCATGTAAACCTC+AGG - chr5_4:45118695-45118714 Msa0853310:intron 45.0%
CGCTATAGAAACATGTCCTG+AGG + chr5_4:45118714-45118733 None:intergenic 45.0%
CTTGCTGAGATGATAAACGC+AGG + chr5_4:45118857-45118876 None:intergenic 45.0%
GCTGAAGATGCACTGTCAAT+AGG - chr5_4:45118876-45118895 Msa0853310:intron 45.0%
AGATGCACTGTCAATAGGGT+TGG - chr5_4:45118881-45118900 Msa0853310:intron 45.0%
CAACATTCAAGCTGATCCCT+TGG - chr5_4:45118929-45118948 Msa0853310:intron 45.0%
CAAGCTGATCCCTTGGATTT+CGG - chr5_4:45118936-45118955 Msa0853310:intron 45.0%
CCGTAGTTTCCGAAATCCAA+GGG + chr5_4:45118948-45118967 None:intergenic 45.0%
CCCTTGGATTTCGGAAACTA+CGG - chr5_4:45118945-45118964 Msa0853310:intron 45.0%
TACTGCTTCTCCTTTGTCCA+TGG + chr5_4:45118988-45119007 None:intergenic 45.0%
GACAAAGGAGAAGCAGTAGA+AGG - chr5_4:45118990-45119009 Msa0853310:intron 45.0%
TCAATTGGTCAAGCTGCTCA+AGG - chr5_4:45119254-45119273 Msa0853310:intron 45.0%
TCTGCTTTGATGTGTCAGCT+TGG + chr5_4:45120456-45120475 None:intergenic 45.0%
AAAGGTAGTAGGTGGAGATG+TGG - chr5_4:45120649-45120668 Msa0853310:intron 45.0%
GCAAGAGTGAGATTCTTGTG+TGG - chr5_4:45120779-45120798 Msa0853310:intron 45.0%
CGGCAATGACCTTAACATTC+TGG + chr5_4:45120849-45120868 None:intergenic 45.0%
GAGTGATTCGATAGTGATGG+AGG + chr5_4:45120883-45120902 None:intergenic 45.0%
AGTGGGTGGGAAACTCTATA+TGG + chr5_4:45120914-45120933 None:intergenic 45.0%
TGTACACGTGTTAAGTGGGT+GGG + chr5_4:45120927-45120946 None:intergenic 45.0%
ATGTACACGTGTTAAGTGGG+TGG + chr5_4:45120928-45120947 None:intergenic 45.0%
!!! CGCCTTTTTCTTTGGTTTGG+AGG - chr5_4:45122774-45122793 Msa0853310:exon 45.0%
CAAGTAACTCTGGCTGTGTT+TGG + chr5_4:45122982-45123001 None:intergenic 45.0%
ATCGCTTACTTCAACCTTCG+TGG + chr5_4:45123059-45123078 None:intergenic 45.0%
CAATTGGCATCTCTCACACT+TGG + chr5_4:45123131-45123150 None:intergenic 45.0%
AGCATCTTCAGCTTGAAGAG+AGG + chr5_4:45123544-45123563 None:intergenic 45.0%
GCTGAAGATGCTCTAACAGA+AGG - chr5_4:45123552-45123571 Msa0853310:intron 45.0%
ATATTTCCCTGAGAACCGGA+GGG + chr5_4:45123933-45123952 None:intergenic 45.0%
TCACCTTAGGCAACAAACTC+TGG - chr5_4:45119211-45119230 Msa0853310:intron 45.0%
ACAATTGCGCTAGCTGCTTA+AGG - chr5_4:45124212-45124231 Msa0853310:CDS 45.0%
CCCTACTCAACACTCAACTT+AGG - chr5_4:45124316-45124335 Msa0853310:CDS 45.0%
! CTTCTCGGGACACTTTTATC+GGG + chr5_4:45124422-45124441 None:intergenic 45.0%
AGGTAATTCGGGAACTTCTC+GGG + chr5_4:45124436-45124455 None:intergenic 45.0%
CAGGTAATTCGGGAACTTCT+CGG + chr5_4:45124437-45124456 None:intergenic 45.0%
GTCATGTGCACAGGTAATTC+GGG + chr5_4:45124447-45124466 None:intergenic 45.0%
CATGTACATGTCATGTGCAC+AGG + chr5_4:45124456-45124475 None:intergenic 45.0%
ATTGGGAGAAACACGATGAG+TGG + chr5_4:45124567-45124586 None:intergenic 45.0%
AAGGAACGATGTCAGAGTCA+CGG + chr5_4:45124626-45124645 None:intergenic 45.0%
AACGAAGTACGGCAAAGGAA+CGG + chr5_4:45124660-45124679 None:intergenic 45.0%
AGTGACAGCAAAAGGAACAG+GGG + chr5_4:45124684-45124703 None:intergenic 45.0%
CAGTGACAGCAAAAGGAACA+GGG + chr5_4:45124685-45124704 None:intergenic 45.0%
ACAGTGACAGCAAAAGGAAC+AGG + chr5_4:45124686-45124705 None:intergenic 45.0%
GTCTTGCCTATGGCAATTTC+TGG + chr5_4:45124805-45124824 None:intergenic 45.0%
!! GTAAACACTGGTCTTGCCTA+TGG + chr5_4:45124815-45124834 None:intergenic 45.0%
!! GAAACTTGTTGGTGTTTGGC+TGG - chr5_4:45125308-45125327 Msa0853310:intron 45.0%
CGATTCTGGTATACCATAGC+AGG + chr5_4:45126245-45126264 None:intergenic 45.0%
TACAAAGCCATAGCTCCCTA+AGG - chr5_4:45126374-45126393 Msa0853310:intron 45.0%
!! CCTCTGTTTTGAGCTTTTGG+GGG + chr5_4:45126537-45126556 None:intergenic 45.0%
!! CCCTCTGTTTTGAGCTTTTG+GGG + chr5_4:45126538-45126557 None:intergenic 45.0%
CCCCAAAAGCTCAAAACAGA+GGG - chr5_4:45126535-45126554 Msa0853310:intron 45.0%
!! GTCCCTCTGTTTTGAGCTTT+TGG + chr5_4:45126540-45126559 None:intergenic 45.0%
AGGGACAACAAACATGTGTC+AGG - chr5_4:45126554-45126573 Msa0853310:intron 45.0%
ACAAACATGTGTCAGGCAAC+CGG - chr5_4:45126561-45126580 Msa0853310:intron 45.0%
!!! GATGTGGATGCTGGGTTTTT+TGG + chr5_4:45126589-45126608 None:intergenic 45.0%
GCGAGTTTATTAAGCTGCTG+CGG + chr5_4:45126621-45126640 None:intergenic 45.0%
ACTCGCAAAAGATACTCCCT+CGG - chr5_4:45126635-45126654 Msa0853310:intron 45.0%
! CTACGGTGACACTTTTCCTT+CGG - chr5_4:45126785-45126804 Msa0853310:intron 45.0%
!! GCATCGGACGAATTTTCAAG+AGG - chr5_4:45127075-45127094 Msa0853310:intron 45.0%
GAATGCAGGCAGATGCTATA+AGG + chr5_4:45127246-45127265 None:intergenic 45.0%
ATATGTAGGCTCATCACTGC+TGG - chr5_4:45127638-45127657 Msa0853310:intron 45.0%
TATGTAGGCTCATCACTGCT+GGG - chr5_4:45127639-45127658 Msa0853310:intron 45.0%
AGGAAGCAAAGGAACAGTGA+CGG - chr5_4:45128074-45128093 Msa0853310:CDS 45.0%
GGCGAAATACGGCAATTGAA+CGG - chr5_4:45128122-45128141 Msa0853310:CDS 45.0%
CGACGATGGCGTAATAACAA+AGG - chr5_4:45128169-45128188 Msa0853310:CDS 45.0%
AAGAAAGAGTCCCGAGAAAC+AGG - chr5_4:45128214-45128233 Msa0853310:intron 45.0%
! ATCCTCTCATCCTGTTTCTC+GGG + chr5_4:45128227-45128246 None:intergenic 45.0%
! CATCCTCTCATCCTGTTTCT+CGG + chr5_4:45128228-45128247 None:intergenic 45.0%
ACTCTCGGGATAGAAACTGT+CGG - chr5_4:45128342-45128361 Msa0853310:intron 45.0%
AACTGTCGGGAGAAATAGCA+AGG - chr5_4:45128356-45128375 Msa0853310:intron 45.0%
!! CGGTAGAGCACCTTTTTCTT+TGG - chr5_4:45128834-45128853 Msa0853310:intron 45.0%
AACCAGCACATCGAAATGTG+GGG - chr5_4:45128999-45129018 Msa0853310:intron 45.0%
CAGCTTCAAGAGAGGATAAG+CGG + chr5_4:45129630-45129649 None:intergenic 45.0%
AGCATCTTCAGCTTCAAGAG+AGG + chr5_4:45129638-45129657 None:intergenic 45.0%
GCTGAAGATGCTCTAACACA+AGG - chr5_4:45129646-45129665 Msa0853310:intron 45.0%
CATCATTCAAGCTGATCCCT+TGG - chr5_4:45129699-45129718 Msa0853310:CDS 45.0%
CAAGCTGATCCCTTGGATTT+CGG - chr5_4:45118936-45118955 Msa0853310:intron 45.0%
CCGTAGTTTCCGAAATCCAA+GGG + chr5_4:45118948-45118967 None:intergenic 45.0%
CCCTTGGATTTCGGAAACTA+CGG - chr5_4:45118945-45118964 Msa0853310:intron 45.0%
TACCACTTCTCCTTTGTCCA+TGG + chr5_4:45129758-45129777 None:intergenic 45.0%
!! AAATAATTTATATAAAATAG+AGG + chr5_4:45118148-45118167 None:intergenic 5.0%
!!! TTTTAAAAAATATAATTTTG+AGG + chr5_4:45118308-45118327 None:intergenic 5.0%
!! TTAACTTATTAATAAATATT+AGG - chr5_4:45120140-45120159 Msa0853310:intron 5.0%
CTCAACTAATCGCGCCGAAA+AGG - chr5_4:45117194-45117213 Msa0853310:intron 50.0%
CCTCCCACATAGTCACTTGA+AGG + chr5_4:45117240-45117259 None:intergenic 50.0%
CCTTCAAGTGACTATGTGGG+AGG - chr5_4:45117237-45117256 Msa0853310:three_prime_UTR 50.0%
GTCGGTTATATGGGAACGTC+CGG - chr5_4:45118237-45118256 Msa0853310:three_prime_UTR 50.0%
GTCCTGTCATGTTTCGAAGC+AGG - chr5_4:45118330-45118349 Msa0853310:three_prime_UTR 50.0%
TCCCTGCTTCGAAACATGAC+AGG + chr5_4:45118335-45118354 None:intergenic 50.0%
! CGGTCGAACGCCTTTTTCTT+TGG - chr5_4:45118568-45118587 Msa0853310:intron 50.0%
! CGCCTTTTTCTTTGGATCGG+AGG - chr5_4:45118576-45118595 Msa0853310:intron 50.0%
GCCGTAGTTTCCGAAATCCA+AGG + chr5_4:45118949-45118968 None:intergenic 50.0%
CGGAAACTACGGCTTTCAGA+TGG - chr5_4:45118956-45118975 Msa0853310:intron 50.0%
CTTTGCAGGCAGATCACCTT+AGG - chr5_4:45119198-45119217 Msa0853310:intron 50.0%
TCAAGCTGCTCAAGGCTTGT+TGG - chr5_4:45119262-45119281 Msa0853310:intron 50.0%
!! TGCTCAAGGCTTGTTGGCTA+TGG - chr5_4:45119268-45119287 Msa0853310:intron 50.0%
!! GCTCAAGGCTTGTTGGCTAT+GGG - chr5_4:45119269-45119288 Msa0853310:intron 50.0%
!! CTCAAGGCTTGTTGGCTATG+GGG - chr5_4:45119270-45119289 Msa0853310:intron 50.0%
!! TCAAGGCTTGTTGGCTATGG+GGG - chr5_4:45119271-45119290 Msa0853310:intron 50.0%
TCCACGAACTCTGCAACAAG+TGG - chr5_4:45120725-45120744 Msa0853310:intron 50.0%
! TCCACTTGTTGCAGAGTTCG+TGG + chr5_4:45120729-45120748 None:intergenic 50.0%
AACAAGTGGAATCAGAGCCC+TGG - chr5_4:45120739-45120758 Msa0853310:intron 50.0%
TTAAGGTCATTGCCGCTCCT+CGG - chr5_4:45120854-45120873 Msa0853310:intron 50.0%
! ACAAGCAACGCACTGACCAA+AGG + chr5_4:45120998-45121017 None:intergenic 50.0%
TTGCGGTTGGGTAACTCAAC+AGG - chr5_4:45121640-45121659 Msa0853310:intron 50.0%
!! GTTTAGAAGCTGTGACGGAC+AGG + chr5_4:45122802-45122821 None:intergenic 50.0%
CATATTTCCCTGAGAACCGG+AGG + chr5_4:45123934-45123953 None:intergenic 50.0%
GGTGATCTGCCTGTAGAGAA+AGG + chr5_4:45124154-45124173 None:intergenic 50.0%
CTCTACAGGCAGATCACCTT+AGG - chr5_4:45124156-45124175 Msa0853310:intron 50.0%
!! ACGCCAGAGTTTGTTGCCTA+AGG + chr5_4:45124175-45124194 None:intergenic 50.0%
!! TGCTTAAGGCTTGCTGGCTA+TGG - chr5_4:45124226-45124245 Msa0853310:CDS 50.0%
!! GCTTAAGGCTTGCTGGCTAT+GGG - chr5_4:45124227-45124246 Msa0853310:CDS 50.0%
!! CTTAAGGCTTGCTGGCTATG+GGG - chr5_4:45124228-45124247 Msa0853310:CDS 50.0%
!! TTAAGGCTTGCTGGCTATGG+GGG - chr5_4:45124229-45124248 Msa0853310:CDS 50.0%
TGGTGGTCGCCAGATTTGTA+GGG + chr5_4:45124538-45124557 None:intergenic 50.0%
GGAGAAACACGATGAGTGGT+GGG + chr5_4:45124563-45124582 None:intergenic 50.0%
! TGGTGTTTGGCTGGTCACTT+CGG - chr5_4:45125317-45125336 Msa0853310:intron 50.0%
!!! GTCCTTGGCGTTAGCCTTTT+AGG - chr5_4:45125339-45125358 Msa0853310:intron 50.0%
AGCCTAAAAGGCTAACGCCA+AGG + chr5_4:45125344-45125363 None:intergenic 50.0%
TTGTGCAGCAGGACTGTTAG+TGG - chr5_4:45125460-45125479 Msa0853310:intron 50.0%
TAGGATGCCTTAGGGAGCTA+TGG + chr5_4:45126384-45126403 None:intergenic 50.0%
CCCCCAAAAGCTCAAAACAG+AGG - chr5_4:45126534-45126553 Msa0853310:intron 50.0%
!!! GATGCTGGGTTTTTTGGTGC+CGG + chr5_4:45126583-45126602 None:intergenic 50.0%
GCTGTTCTGATGTGGATGCT+GGG + chr5_4:45126597-45126616 None:intergenic 50.0%
TGCTGTTCTGATGTGGATGC+TGG + chr5_4:45126598-45126617 None:intergenic 50.0%
CTCGCAAAAGATACTCCCTC+GGG - chr5_4:45126636-45126655 Msa0853310:intron 50.0%
! TGAATGGTGTTGGAACCCGA+GGG + chr5_4:45126654-45126673 None:intergenic 50.0%
! TTGAATGGTGTTGGAACCCG+AGG + chr5_4:45126655-45126674 None:intergenic 50.0%
ATGTAGGCTCATCACTGCTG+GGG - chr5_4:45127640-45127659 Msa0853310:intron 50.0%
GGAACAGTGACGGCGAAATA+CGG - chr5_4:45128084-45128103 Msa0853310:CDS 50.0%
ATACGGCCAAGGAACGACAA+CGG - chr5_4:45128101-45128120 Msa0853310:CDS 50.0%
ATTTCGCCGTTGTCGTTCCT+TGG + chr5_4:45128110-45128129 None:intergenic 50.0%
GGAACGACAACGGCGAAATA+CGG - chr5_4:45128111-45128130 Msa0853310:CDS 50.0%
TGAACGGCGACAACCAAACA+TGG - chr5_4:45128138-45128157 Msa0853310:CDS 50.0%
GCGACAACCAAACATGGCAA+AGG - chr5_4:45128144-45128163 Msa0853310:CDS 50.0%
CGTCGTTCCTTTGCCATGTT+TGG + chr5_4:45128154-45128173 None:intergenic 50.0%
ACATGGCAAAGGAACGACGA+TGG - chr5_4:45128155-45128174 Msa0853310:CDS 50.0%
CGAGAAACAGGATGAGAGGA+TGG - chr5_4:45128226-45128245 Msa0853310:intron 50.0%
GAAACAGGATGAGAGGATGG+TGG - chr5_4:45128229-45128248 Msa0853310:intron 50.0%
CATGTCATTCGGGACACTCT+CGG - chr5_4:45128327-45128346 Msa0853310:intron 50.0%
ATGTCATTCGGGACACTCTC+GGG - chr5_4:45128328-45128347 Msa0853310:intron 50.0%
CTCTCGGGATAGAAACTGTC+GGG - chr5_4:45128343-45128362 Msa0853310:intron 50.0%
CGTTGGATTGAAGAGCGAGA+TGG - chr5_4:45128647-45128666 Msa0853310:intron 50.0%
CTCTGGCGCATGGAAAACAT+CGG - chr5_4:45128814-45128833 Msa0853310:intron 50.0%
ATCCCCACATTTCGATGTGC+TGG + chr5_4:45129004-45129023 None:intergenic 50.0%
CTTCAAGAGAGGATAAGCGG+AGG + chr5_4:45129627-45129646 None:intergenic 50.0%
GCCGTAGTTTCCGAAATCCA+AGG + chr5_4:45118949-45118968 None:intergenic 50.0%
CGGAAACTACGGCTTTCAGA+TGG - chr5_4:45118956-45118975 Msa0853310:intron 50.0%
TGCCATGGACAAAGGAGAAG+TGG - chr5_4:45118983-45119002 Msa0853310:intron 50.0%
TCGCCTTAGGCAAGAAACTC+TGG - chr5_4:45129908-45129927 Msa0853310:five_prime_UTR 50.0%
GCACCAGAGTTTCTTGCCTA+AGG + chr5_4:45129914-45129933 None:intergenic 50.0%
ACGTCAAGCACAGAATCGCG+CGG - chr5_4:45117906-45117925 Msa0853310:intron 55.0%
CTTTCAGATGGCTGCTGCCA+TGG - chr5_4:45118968-45118987 Msa0853310:intron 55.0%
ATGGCTGCTGCCATGGACAA+AGG - chr5_4:45118975-45118994 Msa0853310:intron 55.0%
TTGCAGAGTTCGTGGAGCAG+CGG + chr5_4:45120721-45120740 None:intergenic 55.0%
GTGGAATCAGAGCCCTGGTT+AGG - chr5_4:45120744-45120763 Msa0853310:intron 55.0%
TCCCTCACTGAGCCTAACCA+GGG + chr5_4:45120759-45120778 None:intergenic 55.0%
! GATAGTGATGGAGGAGTCCG+AGG + chr5_4:45120874-45120893 None:intergenic 55.0%
CCACGATGGAGGGACTGAAA+CGG - chr5_4:45122183-45122202 Msa0853310:intron 55.0%
TCTCAACCCTCCGGTTCTCA+GGG - chr5_4:45123924-45123943 Msa0853310:intron 55.0%
GCTAGCTGCTTAAGGCTTGC+TGG - chr5_4:45124220-45124239 Msa0853310:CDS 55.0%
GTGGTGGTCGCCAGATTTGT+AGG + chr5_4:45124539-45124558 None:intergenic 55.0%
!! AACACGATGAGTGGTGGGTG+TGG + chr5_4:45124558-45124577 None:intergenic 55.0%
GGGAGAAACACGATGAGTGG+TGG + chr5_4:45124564-45124583 None:intergenic 55.0%
CGATGTCAGAGTCACGGCAA+AGG + chr5_4:45124620-45124639 None:intergenic 55.0%
ACGGCAAAGGAACGGTGTGA+CGG + chr5_4:45124652-45124671 None:intergenic 55.0%
GGAACAGGGGCAACGAAGTA+CGG + chr5_4:45124671-45124690 None:intergenic 55.0%
! TTTGTGTGGTTGCTGGCTGC+TGG - chr5_4:45125372-45125391 Msa0853310:intron 55.0%
TGACAGATTTGGGGGGTAGC+TGG - chr5_4:45125491-45125510 Msa0853310:intron 55.0%
! GGGTAGCTGGCCTGTTATTG+TGG - chr5_4:45125504-45125523 Msa0853310:intron 55.0%
!! GGCATTGTTGACTCGCGCAT+CGG - chr5_4:45127059-45127078 Msa0853310:intron 55.0%
GTCCCGAGAAACAGGATGAG+AGG - chr5_4:45128222-45128241 Msa0853310:intron 55.0%
GGTGGTCGCGAGAATTACAG+AGG - chr5_4:45128247-45128266 Msa0853310:intron 55.0%
!! GAACCAGTAGGGGTGTTGAC+AGG - chr5_4:45128392-45128411 Msa0853310:intron 55.0%
GTACCTGTCAACACCCCTAC+TGG + chr5_4:45128398-45128417 None:intergenic 55.0%
CTTTCAGATGGCTGCTGCCA+TGG - chr5_4:45118968-45118987 Msa0853310:intron 55.0%
ATGGCTGCTGCCATGGACAA+AGG - chr5_4:45118975-45118994 Msa0853310:intron 55.0%
TCTACCAGGCAGATCGCCTT+AGG - chr5_4:45129895-45129914 Msa0853310:five_prime_UTR 55.0%
GCGCGGCTGCTCGAAAATGT+CGG - chr5_4:45117923-45117942 Msa0853310:intron 60.0%
AGTTCGTGGAGCAGCGGAAG+CGG + chr5_4:45120715-45120734 None:intergenic 60.0%
AGCCCTGGTTAGGCTCAGTG+AGG - chr5_4:45120754-45120773 Msa0853310:intron 60.0%
GCCCTGGTTAGGCTCAGTGA+GGG - chr5_4:45120755-45120774 Msa0853310:intron 60.0%
CTCCCTCACTGAGCCTAACC+AGG + chr5_4:45120760-45120779 None:intergenic 60.0%
TGATGGAGGAGTCCGAGGAG+CGG + chr5_4:45120869-45120888 None:intergenic 60.0%
CCGTTTCAGTCCCTCCATCG+TGG + chr5_4:45122186-45122205 None:intergenic 60.0%
GTCTCAACCCTCCGGTTCTC+AGG - chr5_4:45123923-45123942 Msa0853310:intron 60.0%
!! ACGATGAGTGGTGGGTGTGG+TGG + chr5_4:45124555-45124574 None:intergenic 60.0%
AGGAACGGTGTGACGGCGAA+AGG + chr5_4:45124645-45124664 None:intergenic 60.0%
GGGGCAACGAAGTACGGCAA+AGG + chr5_4:45124665-45124684 None:intergenic 60.0%
! TGGCTGGTCACTTCGGTCCT+TGG - chr5_4:45125324-45125343 Msa0853310:intron 60.0%
GCAGCAGCCAGCAGCTGAAA+AGG + chr5_4:45126461-45126480 None:intergenic 60.0%
!! GCTGCGGTGCTGTTCTGATG+TGG + chr5_4:45126605-45126624 None:intergenic 60.0%
GTGACGGCGAAATACGGCCA+AGG - chr5_4:45128090-45128109 Msa0853310:CDS 60.0%
CTTGCCTAAGGCGATCTGCC+TGG + chr5_4:45129902-45129921 None:intergenic 60.0%
! TTCAGCTGCTGGCTGCTGCG+CGG - chr5_4:45126462-45126481 Msa0853310:intron 65.0%
TGGAGCAGCGGAAGCGGCGA+CGG + chr5_4:45120709-45120728 None:intergenic 70.0%
CTGCGCGGCATCAGCAGCAC+AGG - chr5_4:45126477-45126496 Msa0853310:intron 70.0%
GGAGCAGCGGAAGCGGCGAC+GGG + chr5_4:45120708-45120727 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 45117056 45129960 45117056 ID=Msa0853310;Name=Msa0853310
chr5_4 mRNA 45117056 45129960 45117056 ID=Msa0853310-mRNA-1;Parent=Msa0853310;Name=Msa0853310-mRNA-1;_AED=0.17;_eAED=0.17;_QI=116|0.92|0.85|1|0.84|0.71|14|631|541
chr5_4 exon 45117056 45117113 45117056 ID=Msa0853310-mRNA-1:exon:14240;Parent=Msa0853310-mRNA-1
chr5_4 exon 45117221 45117448 45117221 ID=Msa0853310-mRNA-1:exon:14239;Parent=Msa0853310-mRNA-1
chr5_4 exon 45118127 45118401 45118127 ID=Msa0853310-mRNA-1:exon:14238;Parent=Msa0853310-mRNA-1
chr5_4 exon 45122714 45122852 45122714 ID=Msa0853310-mRNA-1:exon:14237;Parent=Msa0853310-mRNA-1
chr5_4 exon 45123348 45123542 45123348 ID=Msa0853310-mRNA-1:exon:14236;Parent=Msa0853310-mRNA-1
chr5_4 exon 45124195 45124469 45124195 ID=Msa0853310-mRNA-1:exon:14235;Parent=Msa0853310-mRNA-1
chr5_4 exon 45127672 45127810 45127672 ID=Msa0853310-mRNA-1:exon:14234;Parent=Msa0853310-mRNA-1
chr5_4 exon 45127991 45128218 45127991 ID=Msa0853310-mRNA-1:exon:14233;Parent=Msa0853310-mRNA-1
chr5_4 exon 45128393 45128664 45128393 ID=Msa0853310-mRNA-1:exon:14232;Parent=Msa0853310-mRNA-1
chr5_4 exon 45128743 45128806 45128743 ID=Msa0853310-mRNA-1:exon:14231;Parent=Msa0853310-mRNA-1
chr5_4 exon 45128908 45128985 45128908 ID=Msa0853310-mRNA-1:exon:14230;Parent=Msa0853310-mRNA-1
chr5_4 exon 45129059 45129118 45129059 ID=Msa0853310-mRNA-1:exon:14229;Parent=Msa0853310-mRNA-1
chr5_4 exon 45129501 45129575 45129501 ID=Msa0853310-mRNA-1:exon:14228;Parent=Msa0853310-mRNA-1
chr5_4 exon 45129674 45129960 45129674 ID=Msa0853310-mRNA-1:exon:14227;Parent=Msa0853310-mRNA-1
chr5_4 five_prime_UTR 45129845 45129960 45129845 ID=Msa0853310-mRNA-1:five_prime_utr;Parent=Msa0853310-mRNA-1
chr5_4 CDS 45129674 45129844 45129674 ID=Msa0853310-mRNA-1:cds;Parent=Msa0853310-mRNA-1
chr5_4 CDS 45129501 45129575 45129501 ID=Msa0853310-mRNA-1:cds;Parent=Msa0853310-mRNA-1
chr5_4 CDS 45129059 45129118 45129059 ID=Msa0853310-mRNA-1:cds;Parent=Msa0853310-mRNA-1
chr5_4 CDS 45128908 45128985 45128908 ID=Msa0853310-mRNA-1:cds;Parent=Msa0853310-mRNA-1
chr5_4 CDS 45128743 45128806 45128743 ID=Msa0853310-mRNA-1:cds;Parent=Msa0853310-mRNA-1
chr5_4 CDS 45128393 45128664 45128393 ID=Msa0853310-mRNA-1:cds;Parent=Msa0853310-mRNA-1
chr5_4 CDS 45127991 45128218 45127991 ID=Msa0853310-mRNA-1:cds;Parent=Msa0853310-mRNA-1
chr5_4 CDS 45127672 45127810 45127672 ID=Msa0853310-mRNA-1:cds;Parent=Msa0853310-mRNA-1
chr5_4 CDS 45124195 45124469 45124195 ID=Msa0853310-mRNA-1:cds;Parent=Msa0853310-mRNA-1
chr5_4 CDS 45123348 45123542 45123348 ID=Msa0853310-mRNA-1:cds;Parent=Msa0853310-mRNA-1
chr5_4 CDS 45122784 45122852 45122784 ID=Msa0853310-mRNA-1:cds;Parent=Msa0853310-mRNA-1
chr5_4 three_prime_UTR 45122714 45122783 45122714 ID=Msa0853310-mRNA-1:three_prime_utr;Parent=Msa0853310-mRNA-1
chr5_4 three_prime_UTR 45118127 45118401 45118127 ID=Msa0853310-mRNA-1:three_prime_utr;Parent=Msa0853310-mRNA-1
chr5_4 three_prime_UTR 45117221 45117448 45117221 ID=Msa0853310-mRNA-1:three_prime_utr;Parent=Msa0853310-mRNA-1
chr5_4 three_prime_UTR 45117056 45117113 45117056 ID=Msa0853310-mRNA-1:three_prime_utr;Parent=Msa0853310-mRNA-1
Gene Sequence

>Msa0853310

ATGAACTCTTCTTCATCATCAACTCAACTAATCGCGCCGAAAAGGATGAACATGTATGAGCCATTCCTTCAAGTGACTATGTGGGAGGATAGCTTTAAAGTTGATCATAGTACTTTGAATTCAATTGCTTCCCCAATGTTGAAGATGAACATAAGTAGCATGGAGAACAAGTCTGAATGTATCCCTCAAGAATCAAGAGAACCTTCTGGAGATGATCAAGAGACTATTCAAGAACCTGTTCCTAAGGTACTACGACGTCAAGCACAGAATCGCGCGGCTGCTCGAAAATGTCGGCTGCGAAAAAAGGCTTATGTTCAACAACTGGAAACGAGTAGATTGAAGCTCATGCAGTTGGAATTAGATATCGAGAAAACAAGAAAACAGGGTTTATACAGAAACAGTTTATTGGATGTCGGTTATATGGGAACGTCCGGAACAATAAACTCCGGGATATCTTTGTTTGAAATTGAATATGGACGTTGGATTGAAGAACAAGATCGACAAAACGAAGAACTAAGAAATGCATTGCAAACTAATGCATCTGATATACAACTTCATCTACTTGTTGAGAGTAGCTTGAACCAATACTCAAATCTTTTCAGAATGAAAGCAGAAGCTGCAAAGGCTGATGTTTTCCATTTAATATCTGGTGTATGGAAATCACCGGTCGAACGCCTTTTTCTTTGGATCGGAGGATCTCGTCCATCACAAATTCTAAATATCGTGGTACCGAAACTTGAGAATTTGAATGATCAACAAATTGCTAGCATTAACAACCTGCGTTTATCATCTCAGCAAGCTGAAGATGCACTGTCAATAGGGTTGGAGAAACTCCAGCAGAGTATGATCAACAACATTCAAGCTGATCCCTTGGATTTCGGAAACTACGGCTTTCAGATGGCTGCTGCCATGGACAAAGGAGAAGCAGTAGAAGGTTTTGTAATTCAGGCAGATCACCTTAGGCAACAAACTCTGTTATACATGTCACGCATCTTATCAATTGGTCAAGCTGCTCAAGGCTTGTTGGCTATGGGGGAATACTTTCATCGTCTTCGCACTCTTAGTTCATTGTGGACTGCTCGTTCATCAGGGATATCTTTGTTTGAAATTGAATATGGACGTTGGATTGAAGAACAAGATCGGAAAAACGAAGAACTAAGAAATGCATTGCAAACTAATGCATCTGATATACAACTTCATCTACTTGTTGAGAGTAGCTTGAACCAATACTCAAATTTTTTCAGAATGAAAGCAGAAGCTGCAAAGATTGATGCTTTATATTTAATCTCTGGCGCATGGAAAGCGCCGTTAGAACGCCTTTTTCTTTGGTTTGGAGGATCCTGTCCGTCACAGCTTCTAAACATCGTTGTACCTAAGCTCGATGCTTTAACTGATCAACAAATTGTTAGCATTAACAATCTCCGTTTATCCTCTCTTCAAGCTGAAGATGCTCTAACAGAAGGGTTAGAAAAACTTCCGCTAGATTTTGGAAACTATGGCTTTCAGATGGCTGCTGCCATGAACAAAGTAGAAGCAGTAGAAAGTTTTGTAATCCAGGCAGATCACCTTAGGCAACAAACTCTGGCGTACATGTCTCGTATCTTGACAATTGCGCTAGCTGCTTAA
Protein sequence

>Msa0853310

MNSSSSSTQLIAPKRMNMYEPFLQVTMWEDSFKVDHSTLNSIASPMLKMNISSMENKSECIPQESREPSGDDQETIQEPVPKVLRRQAQNRAAARKCRLRKKAYVQQLETSRLKLMQLELDIEKTRKQGLYRNSLLDVGYMGTSGTINSGISLFEIEYGRWIEEQDRQNEELRNALQTNASDIQLHLLVESSLNQYSNLFRMKAEAAKADVFHLISGVWKSPVERLFLWIGGSRPSQILNIVVPKLENLNDQQIASINNLRLSSQQAEDALSIGLEKLQQSMINNIQADPLDFGNYGFQMAAAMDKGEAVEGFVIQADHLRQQTLLYMSRILSIGQAAQGLLAMGEYFHRLRTLSSLWTARSSGISLFEIEYGRWIEEQDRKNEELRNALQTNASDIQLHLLVESSLNQYSNFFRMKAEAAKIDALYLISGAWKAPLERLFLWFGGSCPSQLLNIVVPKLDALTDQQIVSINNLRLSSLQAEDALTEGLEKLPLDFGNYGFQMAAAMNKVEAVESFVIQADHLRQQTLAYMSRILTIALAA*