AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0854170

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0854170 MtrunA17_Chr5g0431441 94.481 453 24 1 60 511 18 470 0.0 885
Msa0854170 MtrunA17_Chr3g0106231 53.731 469 186 11 49 507 5 452 1.11e-173 498
Msa0854170 MtrunA17_Chr5g0431361 51.111 450 209 7 60 506 12 453 2.30e-156 453
Msa0854170 MtrunA17_Chr5g0431421 48.899 454 212 9 60 507 10 449 1.48e-147 430
Msa0854170 MtrunA17_Chr5g0431371 49.015 457 205 10 60 506 10 448 7.88e-146 426
Msa0854170 MtrunA17_Chr5g0431401 48.140 457 209 9 60 506 10 448 1.17e-144 423
Msa0854170 MtrunA17_Chr5g0431431 48.786 412 144 6 53 464 3 347 1.27e-133 391
Msa0854170 MtrunA17_Chr5g0432731 55.369 298 130 2 213 508 2 298 3.76e-118 349
Msa0854170 MtrunA17_Chr3g0106251 55.479 292 126 2 216 507 7 294 1.63e-116 346
Msa0854170 MtrunA17_Chr8g0359821 31.546 485 279 16 60 507 10 478 2.72e-62 211
Msa0854170 MtrunA17_Chr6g0454401 30.738 488 282 17 60 507 10 481 1.30e-61 209
Msa0854170 MtrunA17_Chr2g0278711 30.608 477 292 14 60 507 11 477 1.25e-60 207
Msa0854170 MtrunA17_Chr6g0454191 30.103 485 289 15 60 507 10 481 4.33e-60 205
Msa0854170 MtrunA17_Chr6g0454331 30.658 486 286 15 60 507 7 479 2.22e-59 203
Msa0854170 MtrunA17_Chr6g0454291 30.992 484 285 15 60 507 7 477 4.78e-58 200
Msa0854170 MtrunA17_Chr3g0078841 29.835 486 286 16 60 507 10 478 5.97e-58 199
Msa0854170 MtrunA17_Chr8g0380531 30.901 466 285 13 60 506 10 457 6.47e-58 199
Msa0854170 MtrunA17_Chr3g0118691 30.488 492 289 15 57 508 6 484 7.09e-58 199
Msa0854170 MtrunA17_Chr3g0118771 30.228 483 290 14 60 508 21 490 8.33e-58 199
Msa0854170 MtrunA17_Chr5g0426431 30.722 485 283 18 59 507 11 478 1.68e-57 198
Msa0854170 MtrunA17_Chr6g0464881 29.550 467 288 14 60 507 11 455 1.71e-57 197
Msa0854170 MtrunA17_Chr6g0452771 30.285 492 278 16 60 507 10 480 2.33e-57 198
Msa0854170 MtrunA17_Chr6g0454341 29.835 486 286 17 60 507 10 478 2.53e-57 198
Msa0854170 MtrunA17_Chr6g0453951 29.400 517 310 17 29 507 28 527 3.50e-57 199
Msa0854170 MtrunA17_Chr6g0454121 30.738 488 280 17 60 507 10 479 5.51e-57 197
Msa0854170 MtrunA17_Chr3g0112771 29.437 462 289 9 61 507 13 452 8.05e-57 196
Msa0854170 MtrunA17_Chr7g0250001 29.550 467 288 15 60 508 6 449 9.07e-57 196
Msa0854170 MtrunA17_Chr5g0414331 30.000 470 271 16 60 503 13 450 1.12e-56 196
Msa0854170 MtrunA17_Chr6g0454131 31.148 488 278 17 60 507 10 479 1.72e-56 196
Msa0854170 MtrunA17_Chr3g0118671 29.876 482 291 15 60 507 6 474 1.75e-56 196
Msa0854170 MtrunA17_Chr7g0217881 31.315 479 272 15 60 507 10 462 2.64e-56 195
Msa0854170 MtrunA17_Chr3g0092641 30.083 482 288 17 60 507 12 478 3.85e-56 194
Msa0854170 MtrunA17_Chr6g0454141 28.807 486 293 15 60 507 10 480 4.20e-56 194
Msa0854170 MtrunA17_Chr6g0464921 29.936 471 280 15 60 506 11 455 7.61e-56 193
Msa0854170 MtrunA17_Chr6g0454351 29.730 481 278 15 60 507 12 465 1.32e-55 193
Msa0854170 MtrunA17_Chr6g0454181 29.752 484 291 14 60 507 10 480 1.56e-55 193
Msa0854170 MtrunA17_Chr6g0464861 29.449 472 279 12 60 506 11 453 1.65e-55 192
Msa0854170 MtrunA17_Chr6g0454261 29.132 484 294 15 60 507 10 480 1.88e-55 193
Msa0854170 MtrunA17_Chr3g0118711 28.513 491 304 12 52 508 5 482 1.90e-55 193
Msa0854170 MtrunA17_Chr6g0454361 29.072 485 293 13 60 507 11 481 2.47e-55 192
Msa0854170 MtrunA17_Chr3g0118701 29.878 492 292 15 57 508 6 484 3.40e-55 192
Msa0854170 MtrunA17_Chr6g0454151 30.435 483 287 17 60 507 10 478 1.62e-54 190
Msa0854170 MtrunA17_Chr6g0453961 29.303 488 295 14 57 507 16 490 3.50e-54 190
Msa0854170 MtrunA17_Chr5g0432741 57.692 156 64 2 55 210 5 158 6.80e-54 179
Msa0854170 MtrunA17_Chr6g0454201 30.041 486 287 16 60 507 11 481 1.29e-53 188
Msa0854170 MtrunA17_Chr4g0050341 28.916 498 288 16 49 503 13 487 1.68e-53 188
Msa0854170 MtrunA17_Chr7g0249981 29.550 467 288 13 60 508 25 468 2.78e-53 187
Msa0854170 MtrunA17_Chr8g0377921 30.000 480 283 15 61 507 5 464 3.94e-53 186
Msa0854170 MtrunA17_Chr6g0454301 28.653 527 314 18 18 507 230 731 4.98e-53 191
Msa0854170 MtrunA17_Chr6g0454301 34.483 232 127 6 287 503 5 226 3.12e-34 137
Msa0854170 MtrunA17_Chr8g0336331 27.835 485 298 15 59 507 9 477 5.67e-53 186
Msa0854170 MtrunA17_Chr5g0414321 28.690 481 279 17 60 511 11 456 6.73e-53 186
Msa0854170 MtrunA17_Chr4g0053321 29.661 472 297 13 57 507 23 480 6.96e-53 186
Msa0854170 MtrunA17_Chr6g0454211 30.913 482 288 14 60 507 297 767 8.42e-53 191
Msa0854170 MtrunA17_Chr6g0454211 28.519 270 150 8 170 424 3 244 1.17e-23 105
Msa0854170 MtrunA17_Chr3g0112761 27.742 465 299 8 59 507 7 450 1.00e-52 185
Msa0854170 MtrunA17_Chr6g0464871 29.185 466 291 15 59 506 22 466 1.51e-52 185
Msa0854170 MtrunA17_Chr1g0207981 28.600 493 281 16 57 507 10 473 1.81e-52 185
Msa0854170 MtrunA17_Chr6g0464841 28.908 467 291 13 59 506 10 454 5.11e-52 183
Msa0854170 MtrunA17_Chr7g0249931 28.687 495 302 18 36 508 20 485 1.04e-51 183
Msa0854170 MtrunA17_Chr6g0454321 29.362 470 279 16 60 492 10 463 3.27e-51 185
Msa0854170 MtrunA17_Chr8g0377941 29.774 487 270 13 61 507 8 462 5.30e-51 181
Msa0854170 MtrunA17_Chr3g0118751 29.598 473 277 13 60 508 6 446 9.50e-51 179
Msa0854170 MtrunA17_Chr7g0232411 30.105 475 279 15 58 499 4 458 3.73e-50 178
Msa0854170 MtrunA17_Chr3g0121991 28.148 540 306 20 19 506 36 545 4.16e-50 180
Msa0854170 MtrunA17_Chr3g0118661 28.690 481 299 15 60 508 13 481 5.96e-50 178
Msa0854170 MtrunA17_Chr4g0053501 27.907 473 298 14 60 507 11 465 9.24e-50 178
Msa0854170 MtrunA17_Chr4g0032331 29.449 472 278 14 61 507 9 450 2.88e-49 176
Msa0854170 MtrunA17_Chr5g0448521 26.392 485 301 11 60 508 5 469 3.33e-48 173
Msa0854170 MtrunA17_Chr3g0098111 28.810 479 291 15 60 506 9 469 3.64e-48 173
Msa0854170 MtrunA17_Chr7g0265051 28.313 498 292 14 57 507 6 485 5.03e-48 173
Msa0854170 MtrunA17_Chr1g0207971 29.310 464 297 13 58 506 6 453 1.85e-47 171
Msa0854170 MtrunA17_Chr5g0401721 27.140 479 305 14 61 509 9 473 6.13e-47 170
Msa0854170 MtrunA17_Chr5g0423981 29.916 478 269 18 57 507 7 445 6.55e-47 169
Msa0854170 MtrunA17_Chr7g0232391 29.253 482 266 16 58 495 4 454 7.61e-47 169
Msa0854170 MtrunA17_Chr3g0122001 29.485 485 287 19 60 506 6 473 1.14e-46 174
Msa0854170 MtrunA17_Chr3g0122001 28.364 483 294 17 60 506 486 952 2.76e-45 170
Msa0854170 MtrunA17_Chr5g0412111 27.542 472 306 13 58 506 3 461 2.02e-46 168
Msa0854170 MtrunA17_Chr3g0106241 58.824 136 45 4 59 191 17 144 2.94e-46 160
Msa0854170 MtrunA17_Chr7g0218811 27.473 455 296 10 60 503 15 446 5.35e-46 166
Msa0854170 MtrunA17_Chr7g0218831 28.322 459 286 13 60 503 6 436 5.55e-46 166
Msa0854170 MtrunA17_Chr7g0265101 28.144 501 291 16 57 507 6 487 5.63e-46 167
Msa0854170 MtrunA17_Chr8g0365811 28.008 482 301 13 61 511 496 962 1.44e-45 171
Msa0854170 MtrunA17_Chr8g0365811 29.960 494 282 16 60 511 9 480 3.75e-41 158
Msa0854170 MtrunA17_Chr7g0232331 29.375 480 269 18 58 495 4 455 3.57e-45 165
Msa0854170 MtrunA17_Chr7g0243681 27.500 480 304 15 60 506 11 479 5.16e-45 165
Msa0854170 MtrunA17_Chr7g0243631 28.898 481 287 17 60 499 13 479 7.65e-45 164
Msa0854170 MtrunA17_Chr7g0218791 29.158 463 274 17 60 497 5 438 1.46e-44 162
Msa0854170 MtrunA17_Chr5g0412101 28.485 495 292 14 49 506 1 470 1.51e-44 163
Msa0854170 MtrunA17_Chr8g0336691 27.917 480 284 16 58 499 917 1372 1.70e-44 168
Msa0854170 MtrunA17_Chr8g0336691 28.571 476 286 13 58 499 11 466 2.97e-43 164
Msa0854170 MtrunA17_Chr8g0336691 27.876 452 292 11 58 499 478 905 1.09e-39 154
Msa0854170 MtrunA17_Chr8g0361371 27.083 480 297 11 59 503 6 467 1.71e-44 163
Msa0854170 MtrunA17_Chr1g0207951 29.645 479 279 15 60 506 656 1108 2.07e-44 168
Msa0854170 MtrunA17_Chr1g0207951 28.542 480 284 17 60 509 124 574 2.15e-43 165
Msa0854170 MtrunA17_Chr7g0275511 28.834 489 282 13 50 499 7 468 5.06e-44 162
Msa0854170 MtrunA17_Chr1g0207861 27.883 477 302 14 58 506 6 468 6.60e-44 162
Msa0854170 MtrunA17_Chr7g0232341 28.953 487 270 19 58 499 4 459 6.98e-44 161
Msa0854170 MtrunA17_Chr8g0336741 29.979 477 262 16 60 494 13 459 7.59e-44 161
Msa0854170 MtrunA17_Chr7g0218841 28.233 464 281 15 60 503 6 437 9.04e-44 160
Msa0854170 MtrunA17_Chr8g0335161 28.858 499 274 18 59 510 5 469 2.67e-43 159
Msa0854170 MtrunA17_Chr8g0373301 29.832 476 271 15 57 495 6 455 3.12e-43 159
Msa0854170 MtrunA17_Chr5g0412131 28.000 475 297 13 60 506 12 469 7.43e-43 159
Msa0854170 MtrunA17_Chr4g0011051 27.510 498 299 15 57 507 6 488 8.03e-43 159
Msa0854170 MtrunA17_Chr8g0336651 27.731 476 292 12 58 499 779 1236 1.87e-42 162
Msa0854170 MtrunA17_Chr8g0336651 29.218 486 268 16 58 499 4 457 9.57e-40 154
Msa0854170 MtrunA17_Chr8g0336651 33.333 252 145 6 251 499 536 767 2.76e-32 132
Msa0854170 MtrunA17_Chr6g0454251 29.668 391 238 10 60 416 7 394 4.04e-42 155
Msa0854170 MtrunA17_Chr5g0429711 28.817 465 281 19 58 495 9 450 5.42e-42 156
Msa0854170 MtrunA17_Chr8g0335141 28.425 489 284 19 61 510 10 471 5.54e-42 156
Msa0854170 MtrunA17_Chr8g0347281 27.197 478 278 16 61 499 19 465 1.27e-41 155
Msa0854170 MtrunA17_Chr7g0243771 28.274 481 286 17 60 499 6 468 1.91e-41 155
Msa0854170 MtrunA17_Chr1g0207831 27.682 466 306 11 61 506 9 463 1.96e-41 154
Msa0854170 MtrunA17_Chr1g0179901 27.668 506 283 17 60 508 16 495 2.18e-41 155
Msa0854170 MtrunA17_Chr7g0243931 27.801 482 291 16 60 499 17 483 2.29e-41 155
Msa0854170 MtrunA17_Chr1g0153451 27.835 485 275 15 58 499 4 456 2.77e-41 154
Msa0854170 MtrunA17_Chr7g0232401 27.389 471 291 13 58 495 4 456 4.74e-41 154
Msa0854170 MtrunA17_Chr7g0243871 26.778 478 299 15 60 503 9 469 5.39e-41 154
Msa0854170 MtrunA17_Chr8g0355011 28.424 387 205 8 146 507 23 362 7.17e-41 150
Msa0854170 MtrunA17_Chr4g0044511 27.721 487 290 17 60 506 40 504 9.86e-41 153
Msa0854170 MtrunA17_Chr5g0419771 27.559 508 280 16 60 508 36 514 1.45e-40 153
Msa0854170 MtrunA17_Chr8g0347271 27.311 476 272 17 61 495 20 462 1.51e-40 152
Msa0854170 MtrunA17_Chr7g0265151 27.016 496 302 15 57 508 6 485 3.03e-40 152
Msa0854170 MtrunA17_Chr1g0161351 26.971 482 304 15 56 506 33 497 4.42e-40 151
Msa0854170 MtrunA17_Chr7g0243951 26.360 478 302 13 60 499 11 476 4.66e-40 151
Msa0854170 MtrunA17_Chr7g0275681 26.962 497 287 16 60 507 12 481 9.59e-40 150
Msa0854170 MtrunA17_Chr8g0334831 26.869 495 288 13 59 503 5 475 1.06e-39 150
Msa0854170 MtrunA17_Chr1g0159551 27.234 470 285 16 65 506 19 459 2.13e-39 149
Msa0854170 MtrunA17_Chr6g0459311 26.611 481 291 14 59 502 12 467 3.94e-39 148
Msa0854170 MtrunA17_Chr3g0118721 32.830 265 155 6 259 508 35 291 4.69e-39 144
Msa0854170 MtrunA17_Chr7g0265041 26.908 498 297 16 60 508 11 490 7.11e-39 148
Msa0854170 MtrunA17_Chr7g0218821 28.139 462 284 14 60 497 5 442 8.90e-39 147
Msa0854170 MtrunA17_Chr5g0442491 25.866 491 279 14 59 495 4 463 1.57e-38 147
Msa0854170 MtrunA17_Chr7g0243801 27.743 483 286 17 60 499 7 469 1.89e-38 147
Msa0854170 MtrunA17_Chr8g0339631 28.247 485 284 15 58 502 4 464 2.06e-38 146
Msa0854170 MtrunA17_Chr7g0232311 33.010 309 154 9 223 499 169 456 3.45e-38 145
Msa0854170 MtrunA17_Chr6g0462531 27.331 472 283 16 61 495 5 453 3.68e-38 145
Msa0854170 MtrunA17_Chr2g0302991 25.000 488 289 15 60 503 5 459 5.33e-38 145
Msa0854170 MtrunA17_Chr1g0173121 28.601 479 278 18 61 506 15 462 6.57e-38 144
Msa0854170 MtrunA17_Chr5g0442521 25.253 495 304 16 59 508 4 477 7.24e-38 145
Msa0854170 MtrunA17_Chr8g0366391 27.181 493 283 16 60 503 9 474 9.80e-38 144
Msa0854170 MtrunA17_Chr7g0235051 26.625 477 272 15 60 499 11 446 1.14e-37 144
Msa0854170 MtrunA17_Chr7g0249961 36.842 228 131 6 290 508 38 261 1.68e-37 139
Msa0854170 MtrunA17_Chr5g0419761 25.749 501 296 14 60 507 9 486 2.20e-37 144
Msa0854170 MtrunA17_Chr6g0462571 25.833 480 291 15 61 502 5 457 2.32e-37 143
Msa0854170 MtrunA17_Chr2g0302961 25.826 484 293 15 60 503 5 462 2.57e-37 143
Msa0854170 MtrunA17_Chr8g0339451 29.000 400 223 12 141 502 83 459 3.27e-37 143
Msa0854170 MtrunA17_Chr6g0486251 26.042 480 295 14 59 502 5 460 3.45e-37 142
Msa0854170 MtrunA17_Chr6g0486201 26.042 480 295 14 59 502 5 460 3.45e-37 142
Msa0854170 MtrunA17_Chr8g0339461 30.390 385 211 13 160 507 111 475 5.85e-37 142
Msa0854170 MtrunA17_Chr3g0079731 25.662 491 295 17 58 499 4 473 6.09e-37 142
Msa0854170 MtrunA17_Chr6g0449931 27.484 473 286 14 59 495 5 456 8.60e-37 142
Msa0854170 MtrunA17_Chr7g0243781 26.535 505 275 17 60 506 9 475 1.04e-36 142
Msa0854170 MtrunA17_Chr8g0336731 27.917 480 282 15 62 503 34 487 1.60e-36 141
Msa0854170 MtrunA17_Chr5g0442581 26.130 509 283 15 59 508 4 478 2.66e-36 141
Msa0854170 MtrunA17_Chr4g0044501 26.721 494 314 16 49 508 1 480 2.82e-36 140
Msa0854170 MtrunA17_Chr5g0429681 28.243 478 270 21 59 495 43 488 5.19e-36 140
Msa0854170 MtrunA17_Chr5g0442561 24.800 500 291 15 59 507 4 469 6.09e-36 139
Msa0854170 MtrunA17_Chr8g0339601 33.770 305 154 10 223 494 29 318 1.61e-35 135
Msa0854170 MtrunA17_Chr4g0066201 26.096 479 296 15 64 508 22 476 3.28e-35 137
Msa0854170 MtrunA17_Chr4g0014061 24.074 486 309 11 61 508 10 473 3.32e-35 137
Msa0854170 MtrunA17_Chr7g0243861 26.611 481 298 14 60 499 14 480 3.56e-35 137
Msa0854170 MtrunA17_Chr7g0265141 25.355 493 300 17 60 503 9 482 4.89e-35 137
Msa0854170 MtrunA17_Chr6g0462541 26.282 468 302 13 61 500 5 457 5.25e-35 137
Msa0854170 MtrunA17_Chr4g0060511 26.250 480 304 15 60 499 11 480 5.36e-35 137
Msa0854170 MtrunA17_Chr6g0462551 24.274 482 299 12 61 502 5 460 6.73e-35 136
Msa0854170 MtrunA17_Chr6g0454271 29.054 296 183 8 228 507 3 287 7.34e-35 132
Msa0854170 MtrunA17_Chr4g0066151 26.078 487 293 16 61 506 19 479 9.22e-35 136
Msa0854170 MtrunA17_Chr8g0361411 27.004 474 291 15 57 503 5 450 1.32e-34 135
Msa0854170 MtrunA17_Chr5g0442601 23.673 490 313 13 59 507 403 872 1.37e-34 138
Msa0854170 MtrunA17_Chr5g0442601 30.645 186 103 3 279 442 156 337 3.27e-19 91.3
Msa0854170 MtrunA17_Chr7g0265111 26.327 490 307 16 60 507 39 516 1.74e-34 136
Msa0854170 MtrunA17_Chr6g0462521 26.566 463 284 15 61 495 5 439 2.08e-34 135
Msa0854170 MtrunA17_Chr8g0370941 26.613 496 288 18 59 499 7 481 4.60e-34 134
Msa0854170 MtrunA17_Chr5g0448551 25.747 435 286 13 61 469 8 431 9.18e-34 133
Msa0854170 MtrunA17_Chr6g0454171 28.212 358 183 11 172 507 5 310 1.68e-33 129
Msa0854170 MtrunA17_Chr5g0442541 25.474 475 292 15 59 495 4 454 2.49e-33 132
Msa0854170 MtrunA17_Chr6g0454221 32.353 238 139 5 287 510 5 234 2.74e-33 128
Msa0854170 MtrunA17_Chr5g0426401 28.617 311 189 10 217 507 14 311 6.27e-33 127
Msa0854170 MtrunA17_Chr1g0207931 32.685 257 157 4 263 506 244 497 6.36e-33 131
Msa0854170 MtrunA17_Chr4g0066221 25.205 488 298 19 64 506 15 480 8.92e-33 130
Msa0854170 MtrunA17_Chr2g0307961 25.152 493 304 15 52 507 5 469 9.82e-33 130
Msa0854170 MtrunA17_Chr5g0431391 41.530 183 69 6 29 211 14 158 1.69e-32 124
Msa0854170 MtrunA17_Chr4g0066171 25.726 482 289 17 64 506 25 476 1.76e-32 129
Msa0854170 MtrunA17_Chr5g0440421 25.146 513 293 18 60 508 10 495 1.79e-32 130
Msa0854170 MtrunA17_Chr4g0066281 25.786 477 294 15 64 506 16 466 2.69e-32 129
Msa0854170 MtrunA17_Chr8g0374941 25.253 396 243 12 144 506 1042 1417 6.89e-32 130
Msa0854170 MtrunA17_Chr8g0374941 24.538 379 233 12 144 489 104 462 8.58e-27 115
Msa0854170 MtrunA17_Chr8g0374941 25.333 375 233 11 144 488 569 926 1.80e-26 114
Msa0854170 MtrunA17_Chr5g0393591 25.000 472 276 15 60 506 17 435 1.11e-31 127
Msa0854170 MtrunA17_Chr8g0374901 24.593 492 293 20 64 506 16 478 1.28e-31 127
Msa0854170 MtrunA17_Chr8g0339441 34.742 213 108 5 316 502 218 425 1.64e-31 126
Msa0854170 MtrunA17_Chr4g0042891 27.122 483 290 20 58 503 5 462 1.94e-31 126
Msa0854170 MtrunA17_Chr5g0403641 25.207 484 271 14 60 499 59 495 2.01e-31 127
Msa0854170 MtrunA17_Chr8g0336251 24.944 449 297 11 58 480 5 439 2.25e-31 126
Msa0854170 MtrunA17_Chr8g0367221 24.896 482 321 14 24 481 1258 1722 2.48e-31 129
Msa0854170 MtrunA17_Chr8g0367221 26.096 456 281 18 60 481 12 445 1.43e-26 114
Msa0854170 MtrunA17_Chr8g0367221 25.261 479 297 15 36 475 774 1230 6.06e-24 106
Msa0854170 MtrunA17_Chr7g0243761 25.758 462 285 16 60 476 11 459 2.64e-31 126
Msa0854170 MtrunA17_Chr8g0336321 24.944 449 297 11 58 480 5 439 3.31e-31 125
Msa0854170 MtrunA17_Chr8g0355221 25.000 480 309 17 62 503 17 483 4.10e-31 126
Msa0854170 MtrunA17_Chr6g0463891 26.796 362 233 10 162 499 124 477 7.67e-31 125
Msa0854170 MtrunA17_Chr8g0334851 28.338 367 220 12 161 502 114 462 9.02e-31 124
Msa0854170 MtrunA17_Chr8g0334861 28.767 365 208 13 162 495 109 452 1.49e-30 124
Msa0854170 MtrunA17_Chr8g0382021 26.061 495 268 18 65 506 39 488 1.95e-30 124
Msa0854170 MtrunA17_Chr5g0420801 24.788 472 306 15 59 503 6 455 2.31e-30 123
Msa0854170 MtrunA17_Chr4g0044521 31.034 290 159 10 240 503 189 463 4.91e-30 122
Msa0854170 MtrunA17_Chr8g0374971 24.619 394 248 12 144 506 105 480 5.50e-30 122
Msa0854170 MtrunA17_Chr5g0428081 25.826 484 293 17 64 503 15 476 5.88e-30 122
Msa0854170 MtrunA17_Chr5g0401851 27.225 382 232 10 149 499 110 476 6.66e-30 122
Msa0854170 MtrunA17_Chr8g0369341 23.553 501 286 16 59 503 6 465 9.47e-30 122
Msa0854170 MtrunA17_Chr2g0329111 24.131 489 306 18 61 503 7 476 9.84e-30 122
Msa0854170 MtrunA17_Chr1g0153461 33.173 208 107 5 313 495 1 201 2.38e-29 115
Msa0854170 MtrunA17_Chr8g0350881 26.209 393 243 12 144 506 105 480 3.68e-29 120
Msa0854170 MtrunA17_Chr7g0243711 34.286 210 112 5 312 499 104 309 4.86e-29 117
Msa0854170 MtrunA17_Chr7g0232351 26.410 390 241 11 58 416 4 378 1.02e-28 117
Msa0854170 MtrunA17_Chr4g0042931 24.845 483 299 17 58 503 5 460 1.02e-28 119
Msa0854170 MtrunA17_Chr7g0218311 34.112 214 116 5 310 499 264 476 2.70e-28 117
Msa0854170 MtrunA17_Chr4g0066131 24.431 483 300 16 61 503 14 471 5.06e-28 117
Msa0854170 MtrunA17_Chr7g0241781 25.227 440 281 15 56 484 5 407 5.18e-28 116
Msa0854170 MtrunA17_Chr6g0482061 24.644 491 296 18 58 500 9 473 6.77e-28 116
Msa0854170 MtrunA17_Chr4g0066261 31.797 217 123 5 314 506 266 481 7.92e-28 116
Msa0854170 MtrunA17_Chr2g0294931 33.645 214 117 5 314 503 266 478 9.17e-28 116
Msa0854170 MtrunA17_Chr5g0442511 23.941 472 287 14 59 495 48 482 1.25e-27 115
Msa0854170 MtrunA17_Chr1g0165701 23.270 477 318 16 62 503 17 480 2.60e-27 115
Msa0854170 MtrunA17_Chr6g0463851 24.286 490 302 15 64 506 15 482 2.79e-27 114
Msa0854170 MtrunA17_Chr4g0072771 21.730 474 305 12 60 503 25 462 3.30e-27 114
Msa0854170 MtrunA17_Chr7g0243851 30.651 261 154 7 264 499 177 435 5.68e-27 113
Msa0854170 MtrunA17_Chr5g0416741 28.185 259 160 7 264 499 221 476 9.34e-27 113
Msa0854170 MtrunA17_Chr5g0410941 24.644 491 294 19 64 506 27 489 1.01e-26 113
Msa0854170 MtrunA17_Chr5g0409591 24.431 483 280 15 58 481 2 458 3.44e-26 111
Msa0854170 MtrunA17_Chr2g0294921 25.000 484 299 18 64 503 164 627 5.23e-26 112
Msa0854170 MtrunA17_Chr2g0278741 24.597 496 301 18 32 487 67 529 6.09e-26 111
Msa0854170 MtrunA17_Chr6g0463861 30.275 218 126 7 314 506 257 473 2.54e-25 108
Msa0854170 MtrunA17_Chr7g0243911 36.842 190 98 6 312 481 18 205 3.12e-25 103
Msa0854170 MtrunA17_Chr4g0069611 23.423 444 308 14 60 487 15 442 3.66e-25 108
Msa0854170 MtrunA17_Chr2g0278721 24.086 465 309 18 46 487 4 447 4.00e-25 109
Msa0854170 MtrunA17_Chr2g0278721 27.753 227 139 8 270 483 740 954 2.02e-18 89.0
Msa0854170 MtrunA17_Chr6g0454371 31.285 179 106 3 338 507 1 171 4.44e-25 102
Msa0854170 MtrunA17_Chr4g0072761 23.312 459 297 15 60 495 15 441 1.30e-24 106
Msa0854170 MtrunA17_Chr2g0294941 27.151 372 213 13 156 489 11 362 1.40e-24 105
Msa0854170 MtrunA17_Chr8g0374931 25.707 389 238 13 159 512 117 489 3.25e-24 105
Msa0854170 MtrunA17_Chr7g0243611 29.876 241 145 6 241 457 56 296 6.21e-24 102
Msa0854170 MtrunA17_Chr7g0241801 26.009 446 270 18 56 484 5 407 1.20e-23 103
Msa0854170 MtrunA17_Chr4g0029131 24.138 435 295 11 60 476 12 429 3.65e-23 103
Msa0854170 MtrunA17_Chr4g0044481 25.000 412 238 12 58 438 25 396 1.75e-22 99.8
Msa0854170 MtrunA17_Chr7g0243811 27.035 344 198 11 108 432 59 368 2.76e-22 99.0
Msa0854170 MtrunA17_Chr8g0336261 34.507 142 78 2 338 470 1 136 3.27e-22 92.4
Msa0854170 MtrunA17_Chr6g0464091 23.904 456 298 16 60 487 18 452 4.08e-22 99.4
Msa0854170 MtrunA17_Chr2g0302851 23.851 457 290 18 60 487 16 443 5.98e-22 98.6
Msa0854170 MtrunA17_Chr5g0427571 29.958 237 145 5 260 480 42 273 9.51e-22 95.9
Msa0854170 MtrunA17_Chr6g0466831 23.391 466 307 15 47 487 5 445 3.63e-21 96.3
Msa0854170 MtrunA17_Chr4g0039881 24.099 444 285 15 70 487 2 419 4.65e-21 95.9
Msa0854170 MtrunA17_Chr1g0196851 23.636 440 294 11 60 476 49 469 4.91e-21 96.3
Msa0854170 MtrunA17_Chr3g0079711 32.584 178 93 5 342 495 3 177 9.19e-21 90.1
Msa0854170 MtrunA17_Chr7g0250021 27.044 318 202 12 58 362 10 310 9.27e-21 93.2
Msa0854170 MtrunA17_Chr1g0207881 31.667 180 113 2 335 506 207 384 2.64e-20 92.8
Msa0854170 MtrunA17_Chr6g0466841 23.176 466 308 15 47 487 5 445 4.98e-20 92.8
Msa0854170 MtrunA17_Chr7g0231631 25.692 253 160 8 264 499 11 252 3.42e-19 87.8
Msa0854170 MtrunA17_Chr6g0454231 26.953 256 144 9 257 507 2 219 5.91e-19 89.7
Msa0854170 MtrunA17_Chr6g0454231 30.890 191 113 7 60 233 250 438 2.46e-13 72.0
Msa0854170 MtrunA17_Chr3g0092031 30.899 178 111 5 318 487 6 179 1.96e-18 84.0
Msa0854170 MtrunA17_Chr8g0337381 35.833 120 70 3 377 495 1 114 4.52e-18 80.9
Msa0854170 MtrunA17_Chr5g0416821 23.823 361 232 11 162 499 126 466 4.95e-18 87.0
Msa0854170 MtrunA17_Chr4g0066141 31.447 159 91 5 364 506 195 351 6.68e-18 85.5
Msa0854170 MtrunA17_Chr4g0029151 24.944 445 279 16 60 476 20 437 9.69e-18 85.9
Msa0854170 MtrunA17_Chr6g0453981 30.732 205 127 6 170 362 3 204 1.24e-17 82.0
Msa0854170 MtrunA17_Chr2g0319801 24.401 459 291 19 56 484 4 436 2.05e-16 81.6
Msa0854170 MtrunA17_Chr4g0029161 23.641 423 284 12 60 476 12 401 3.09e-16 80.9
Msa0854170 MtrunA17_Chr2g0319731 24.561 456 294 18 56 484 21 453 4.17e-16 80.9
Msa0854170 MtrunA17_Chr5g0426411 31.707 164 101 5 60 213 12 174 4.52e-16 76.3
Msa0854170 MtrunA17_Chr4g0040711 23.849 239 162 4 257 484 207 436 1.01e-15 79.7
Msa0854170 MtrunA17_Chr4g0040691 24.555 281 174 8 226 484 172 436 1.65e-15 79.0
Msa0854170 MtrunA17_Chr8g0357361 28.141 199 132 4 251 438 50 248 3.07e-15 75.9
Msa0854170 MtrunA17_Chr2g0283041 20.968 434 298 14 60 469 7 419 5.96e-15 77.0
Msa0854170 MtrunA17_Chr6g0454281 31.720 186 105 7 60 225 10 193 1.01e-13 70.5
Msa0854170 MtrunA17_Chr2g0319791 21.007 457 315 14 56 487 4 439 4.44e-13 71.2
Msa0854170 MtrunA17_Chr8g0334841 34.266 143 84 5 223 363 1 135 9.42e-13 66.6
Msa0854170 MtrunA17_Chr6g0453941 26.368 201 134 5 174 362 59 257 1.96e-12 67.8
Msa0854170 MtrunA17_Chr2g0319761 22.614 482 313 19 57 506 5 458 7.21e-12 67.4
Msa0854170 MtrunA17_Chr2g0321331 25.397 252 120 7 244 484 51 245 4.69e-11 63.5
Msa0854170 MtrunA17_Chr2g0319751 21.834 458 310 16 57 488 482 917 7.67e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0854170 AT2G30150.2 51.836 463 207 9 49 506 1 452 2.18e-162 469
Msa0854170 AT2G30150.1 52.125 447 199 8 64 506 1 436 1.35e-158 458
Msa0854170 AT2G30140.1 51.732 462 203 10 52 506 3 451 1.24e-154 449
Msa0854170 AT2G30140.2 51.732 462 202 10 52 506 3 450 3.03e-154 447
Msa0854170 AT1G22400.1 30.020 493 285 16 60 511 13 486 1.15e-60 207
Msa0854170 AT1G05675.1 29.149 470 283 12 59 503 5 449 1.63e-60 206
Msa0854170 AT1G05680.1 30.000 470 279 13 59 503 5 449 1.85e-60 206
Msa0854170 AT2G36970.1 28.690 481 289 14 60 506 10 470 2.06e-60 207
Msa0854170 AT2G28080.1 29.979 467 288 10 64 507 22 472 2.48e-60 206
Msa0854170 AT1G78270.1 30.977 481 287 17 60 507 13 481 4.22e-60 206
Msa0854170 AT1G22360.1 30.595 487 285 17 60 509 10 480 4.44e-60 206
Msa0854170 AT2G31750.1 30.398 477 278 15 59 508 7 456 5.60e-59 202
Msa0854170 AT2G31750.2 30.208 480 281 15 59 511 7 459 1.41e-58 202
Msa0854170 AT1G22380.1 30.879 489 287 16 60 512 13 486 3.89e-57 198
Msa0854170 AT4G01070.1 29.053 475 284 13 58 499 6 460 7.58e-57 197
Msa0854170 AT1G22340.1 29.796 490 282 17 60 507 13 482 1.32e-56 196
Msa0854170 AT3G46660.1 30.193 467 283 12 56 503 10 452 1.39e-56 196
Msa0854170 AT3G46670.1 30.538 465 282 12 56 503 5 445 2.10e-56 195
Msa0854170 AT2G43840.2 29.787 470 277 15 60 506 7 446 5.44e-56 194
Msa0854170 AT2G43840.1 29.787 470 277 15 60 506 7 446 1.00e-55 193
Msa0854170 AT4G15480.1 27.801 482 309 12 54 509 13 481 2.77e-54 190
Msa0854170 AT1G22360.2 28.454 485 286 14 60 509 10 468 3.28e-54 189
Msa0854170 AT3G21560.1 27.733 494 309 17 49 512 1 476 4.59e-54 190
Msa0854170 AT5G59580.1 29.614 466 282 13 60 506 9 447 7.31e-54 188
Msa0854170 AT5G38040.1 29.374 463 272 14 68 506 18 449 1.58e-53 187
Msa0854170 AT2G43820.1 29.677 465 284 13 60 506 7 446 1.02e-52 185
Msa0854170 AT1G22370.2 29.253 482 293 15 60 509 13 478 2.28e-52 185
Msa0854170 AT5G38010.1 28.541 466 292 10 60 506 10 453 2.70e-52 184
Msa0854170 AT5G59590.1 27.837 467 292 10 59 506 9 449 1.51e-51 182
Msa0854170 AT4G15490.1 29.079 478 301 16 55 507 3 467 1.61e-50 180
Msa0854170 AT1G01420.2 29.374 463 265 15 58 483 9 446 1.91e-50 180
Msa0854170 AT5G05900.1 31.423 471 270 15 61 508 9 449 2.31e-50 179
Msa0854170 AT1G01420.1 29.374 463 265 15 58 483 6 443 2.42e-50 179
Msa0854170 AT4G15500.1 28.211 475 294 13 60 507 9 463 5.80e-50 178
Msa0854170 AT2G31790.1 28.936 470 286 15 60 504 8 454 4.59e-49 175
Msa0854170 AT3G11340.1 28.602 465 285 12 61 507 10 445 7.36e-49 174
Msa0854170 AT1G24100.1 28.008 482 288 15 55 506 6 458 2.29e-48 174
Msa0854170 AT2G23250.1 29.322 457 276 15 69 506 7 435 4.20e-48 172
Msa0854170 AT2G36800.1 28.800 500 291 16 60 512 12 493 4.19e-47 171
Msa0854170 AT3G46680.1 28.510 463 287 15 60 503 9 446 6.07e-47 169
Msa0854170 AT4G15550.1 28.926 484 286 14 56 503 9 470 6.35e-47 170
Msa0854170 AT1G10400.1 28.571 483 286 18 60 510 7 462 1.26e-46 169
Msa0854170 AT2G36750.1 28.685 502 293 16 57 512 7 489 2.50e-46 169
Msa0854170 AT1G05560.1 28.571 483 279 17 56 506 3 451 4.29e-46 167
Msa0854170 AT1G05560.2 28.083 527 307 19 15 506 12 501 5.87e-46 168
Msa0854170 AT2G26480.1 27.766 461 296 11 61 509 9 444 9.80e-46 166
Msa0854170 AT2G23260.1 27.332 461 306 13 59 506 9 453 1.61e-45 166
Msa0854170 AT3G46650.1 27.571 457 277 11 61 502 11 428 5.78e-45 164
Msa0854170 AT3G46720.1 29.425 452 286 12 61 503 10 437 7.31e-45 164
Msa0854170 AT2G36780.1 26.054 522 294 17 47 508 1 490 8.45e-44 162
Msa0854170 AT3G46700.1 26.638 458 303 11 60 506 9 444 1.49e-43 160
Msa0854170 AT5G05880.1 29.574 470 279 14 60 506 8 448 2.04e-43 160
Msa0854170 AT5G05870.1 29.387 473 282 10 60 506 8 454 2.78e-43 160
Msa0854170 AT4G15280.1 24.746 493 306 11 60 508 4 475 4.81e-43 159
Msa0854170 AT4G15280.2 24.746 493 306 11 60 508 36 507 8.36e-43 159
Msa0854170 AT2G36790.1 27.984 511 297 16 47 508 1 489 2.15e-42 158
Msa0854170 AT3G21790.1 25.605 496 299 15 60 506 4 478 2.17e-42 158
Msa0854170 AT3G46690.1 28.509 456 288 15 60 499 9 442 3.82e-42 156
Msa0854170 AT3G02100.1 28.755 466 288 15 60 503 13 456 1.06e-41 155
Msa0854170 AT3G21800.1 25.667 487 304 13 61 506 6 475 1.18e-41 155
Msa0854170 AT2G16890.2 28.484 488 279 22 60 506 9 467 2.04e-41 155
Msa0854170 AT5G14860.1 27.143 490 304 16 60 512 8 481 2.40e-41 155
Msa0854170 AT1G05530.1 26.667 480 291 13 60 507 5 455 2.81e-41 154
Msa0854170 AT2G29740.1 28.157 483 297 15 59 506 7 474 5.14e-41 154
Msa0854170 AT5G05890.1 28.118 473 286 11 60 506 8 452 7.91e-41 153
Msa0854170 AT3G21760.1 26.096 502 291 14 60 506 4 480 1.46e-40 153
Msa0854170 AT3G21750.1 25.413 484 307 13 60 507 4 469 3.12e-40 152
Msa0854170 AT2G36770.1 26.163 516 307 16 47 511 1 493 5.91e-40 151
Msa0854170 AT2G36760.1 26.087 506 294 17 57 508 11 490 6.08e-40 151
Msa0854170 AT3G21780.1 26.250 480 306 14 60 506 4 468 6.71e-40 151
Msa0854170 AT5G05860.1 29.122 467 285 13 60 507 9 448 7.89e-40 150
Msa0854170 AT2G29730.1 25.205 488 307 16 59 512 4 467 1.05e-39 150
Msa0854170 AT1G01390.1 27.975 479 292 12 58 503 6 464 1.98e-39 149
Msa0854170 AT1G01390.2 27.975 479 292 12 58 503 23 481 3.44e-39 149
Msa0854170 AT2G15480.2 26.775 493 297 19 60 503 10 487 1.61e-38 147
Msa0854170 AT2G15480.1 27.216 485 295 19 60 503 10 477 6.63e-38 145
Msa0854170 AT3G53160.1 26.157 497 299 18 60 508 8 484 7.90e-38 145
Msa0854170 AT2G15490.3 27.366 486 293 18 60 503 7 474 1.21e-37 144
Msa0854170 AT3G55700.1 24.947 469 304 12 61 507 9 451 2.51e-37 143
Msa0854170 AT2G29710.1 25.000 484 304 16 59 507 4 463 4.72e-37 142
Msa0854170 AT3G53150.1 25.800 500 310 13 60 508 22 511 4.99e-37 143
Msa0854170 AT2G15490.1 27.198 489 293 18 60 503 7 477 5.16e-37 143
Msa0854170 AT2G16890.3 28.894 443 248 20 60 462 9 424 7.05e-37 141
Msa0854170 AT5G03490.1 28.118 473 280 19 53 497 14 454 8.54e-37 142
Msa0854170 AT3G55710.1 25.212 472 303 14 61 507 9 455 1.48e-36 141
Msa0854170 AT4G34131.1 27.218 496 290 19 55 503 5 476 1.85e-36 141
Msa0854170 AT2G29750.1 27.403 489 298 17 59 509 7 476 1.96e-36 141
Msa0854170 AT5G17050.1 23.395 483 322 13 49 508 1 458 5.82e-36 139
Msa0854170 AT5G26310.1 24.948 485 288 17 60 499 7 460 6.45e-36 140
Msa0854170 AT1G07250.1 30.168 358 213 12 171 508 134 474 1.59e-35 139
Msa0854170 AT1G07260.1 29.459 370 230 10 157 509 119 474 1.67e-35 138
Msa0854170 AT4G15260.1 25.668 374 219 9 171 508 6 356 1.41e-34 134
Msa0854170 AT2G18570.1 26.514 479 289 12 60 499 5 459 2.19e-34 135
Msa0854170 AT4G14090.1 26.022 465 298 15 60 503 13 452 3.54e-34 134
Msa0854170 AT5G17040.1 22.845 464 316 11 59 507 4 440 5.60e-32 128
Msa0854170 AT3G50740.1 23.967 484 289 14 60 494 7 460 6.88e-32 128
Msa0854170 AT4G36770.1 25.773 485 263 18 60 489 4 446 1.07e-31 127
Msa0854170 AT5G12890.1 27.600 500 291 21 56 507 6 482 1.53e-31 127
Msa0854170 AT5G37950.1 26.687 326 216 7 106 416 26 343 1.90e-31 124
Msa0854170 AT4G34138.1 26.195 481 288 17 60 496 11 468 3.18e-31 126
Msa0854170 AT5G17030.1 23.750 480 323 15 49 508 1 457 4.80e-31 125
Msa0854170 AT5G66690.1 24.167 480 288 14 60 495 7 454 4.98e-31 125
Msa0854170 AT1G73880.1 24.431 483 315 15 53 507 7 467 1.57e-30 124
Msa0854170 AT1G07240.1 30.483 269 162 6 257 507 215 476 2.76e-30 124
Msa0854170 AT4G01070.2 29.154 319 199 9 58 365 6 308 2.94e-30 121
Msa0854170 AT5G37950.2 26.154 325 213 6 106 416 26 337 3.43e-30 121
Msa0854170 AT1G30530.1 23.418 474 313 16 55 507 7 451 2.98e-29 120
Msa0854170 AT2G18560.1 27.110 391 231 12 141 499 1 369 4.42e-29 119
Msa0854170 AT1G22370.1 28.571 315 189 10 217 509 8 308 6.85e-29 116
Msa0854170 AT3G16520.3 25.949 474 297 15 61 503 6 456 8.97e-29 119
Msa0854170 AT3G22250.1 23.894 452 290 12 61 478 9 440 2.60e-28 117
Msa0854170 AT5G65550.1 23.696 460 296 16 55 483 4 439 5.13e-28 117
Msa0854170 AT3G16520.1 27.873 409 248 13 61 438 6 398 2.79e-27 114
Msa0854170 AT3G16520.2 27.873 409 248 13 61 438 6 398 3.10e-27 114
Msa0854170 AT4G34135.1 25.102 490 299 16 60 503 11 478 7.34e-27 114
Msa0854170 AT5G17040.2 27.243 301 194 7 217 507 53 338 2.88e-26 110
Msa0854170 AT5G49690.1 24.324 444 297 14 60 484 10 433 6.11e-26 110
Msa0854170 AT1G51210.1 24.670 454 291 17 52 481 6 432 4.30e-25 108
Msa0854170 AT1G06000.1 22.904 489 270 17 60 506 10 433 1.72e-20 94.4
Msa0854170 AT2G22590.1 22.126 461 301 17 60 483 15 454 1.65e-18 88.6
Msa0854170 AT5G53990.1 21.300 446 304 13 60 487 6 422 2.70e-16 81.6
Msa0854170 AT3G29630.1 23.394 436 274 16 60 462 6 414 3.68e-16 81.3
Msa0854170 AT5G54010.1 22.197 437 296 15 60 477 6 417 1.12e-14 76.6
Msa0854170 AT1G64910.1 23.649 444 264 18 58 462 4 411 1.31e-14 76.6
Msa0854170 AT4G09500.2 20.513 468 327 14 57 507 3 442 3.38e-13 72.0
Msa0854170 AT2G22930.1 20.805 447 311 13 57 487 3 422 3.41e-13 72.0
Msa0854170 AT4G27570.1 21.510 437 283 16 60 462 7 417 1.81e-12 69.7
Msa0854170 AT5G54060.1 23.636 440 287 16 61 465 14 439 6.93e-12 68.2
Msa0854170 AT4G27560.1 21.053 437 285 14 60 462 7 417 7.37e-12 67.8

Find 152 sgRNAs with CRISPR-Local

Find 357 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCATTGTATTATCTTCTA+AGG 0.154607 5_4:+46442772 Msa0854170:three_prime_UTR
CATTCAATGGACTAAATTTC+AGG 0.188519 5_4:-46442847 None:intergenic
TAGGCTTGTTAGAAGATTTA+TGG 0.205219 5_4:+46442570 Msa0854170:CDS
GAATCAAGTAGTTTCTTAAA+TGG 0.207531 5_4:-46441018 None:intergenic
AACAGGAACATTCCTCTTAT+TGG 0.211410 5_4:-46441103 None:intergenic
TACATGATAGCTATTTGTTT+TGG 0.213058 5_4:+46441067 Msa0854170:CDS
TTGAACTTGATTATATAAAT+TGG 0.214972 5_4:+46442131 Msa0854170:CDS
TGAAGCTGTTATGACTAAAA+TGG 0.236354 5_4:+46440990 Msa0854170:CDS
AATAATATGAAAGCCTTTCT+TGG 0.246704 5_4:+46442688 Msa0854170:CDS
TTGATGTTGTTGTTTGGTTT+TGG 0.265612 5_4:-46440901 None:intergenic
AAAGGTTGGTCCATCATTAT+TGG 0.266008 5_4:-46442454 None:intergenic
GTGGTGGGTGGAGGAGGATT+TGG 0.277697 5_4:-46440733 None:intergenic
AAAGATATTTGTGGGGAAAA+AGG 0.278339 5_4:+46442304 Msa0854170:CDS
AGTGAAAGATAATGGAATTA+TGG 0.305044 5_4:-46440683 None:intergenic
GTAGGTCCAATTGTGTAAAT+TGG 0.309840 5_4:-46442055 None:intergenic
TTGAGGCTCAATTTCATATA+TGG 0.312256 5_4:-46441999 None:intergenic
AACAAGGATGTTGGGGTTGT+TGG 0.318935 5_4:-46440830 None:intergenic
TGTTAGAAGATTTATGGATT+TGG 0.328441 5_4:+46442576 Msa0854170:CDS
TCTATACCAATTTACACAAT+TGG 0.329382 5_4:+46442049 Msa0854170:CDS
ATCTTTGCCTCGACCTTCTT+CGG 0.344761 5_4:-46440953 None:intergenic
AACTAACCTGAAGCATTTAC+TGG 0.357766 5_4:-46441204 None:intergenic
AAACGTGTGGATTACATTCC+GGG 0.361089 5_4:+46441851 Msa0854170:CDS
ATTTGGCCGTGACTAAAATA+AGG 0.365609 5_4:-46442082 None:intergenic
TATATCTTACTCCTACTCTA+TGG 0.365931 5_4:-46442733 None:intergenic
TTCAATAAAGACTGCACTGC+TGG 0.366424 5_4:-46438409 None:intergenic
TCTTCGGAGGGAATAACGTT+TGG 0.366691 5_4:-46440937 None:intergenic
CAAACGTGTGGATTACATTC+CGG 0.374925 5_4:+46441850 Msa0854170:CDS
ATGTTCCTGTTGCGTCGTTT+TGG 0.379190 5_4:+46441115 Msa0854170:CDS
TATAATCAAGTTCAACATCT+TGG 0.379255 5_4:-46442123 None:intergenic
ACCAACTTTCCTACATTCAA+TGG 0.379767 5_4:-46442860 None:intergenic
GCGAATTTGATGTTGTTGTT+TGG 0.382887 5_4:-46440907 None:intergenic
GATTACCCAGTAAATGCTTC+AGG 0.389628 5_4:+46441198 Msa0854170:CDS
ACTTGGAGAGTGAAAGATAA+TGG 0.392453 5_4:-46440691 None:intergenic
TGCTTTCTTCATCCATGGTA+TGG 0.395710 5_4:-46441957 None:intergenic
CTTCGGAGGGAATAACGTTT+GGG 0.396861 5_4:-46440936 None:intergenic
TCTTAAACATTATCGTCGTT+TGG 0.398240 5_4:+46441164 Msa0854170:CDS
AATGATTTGAATGCCTTCAT+TGG 0.402190 5_4:+46438336 Msa0854170:five_prime_UTR
ATAGTTGAGGATTGGAAGGT+TGG 0.402228 5_4:+46442490 Msa0854170:CDS
TGGTGCTTAGAGAGGCAATT+TGG 0.402893 5_4:-46442099 None:intergenic
AATCAAGTAGTTTCTTAAAT+GGG 0.404892 5_4:-46441017 None:intergenic
GGTTGGGTGGAGAGTGGAGA+AGG 0.409270 5_4:+46442507 Msa0854170:CDS
ATAGGCCAAAACGACGCAAC+AGG 0.417767 5_4:-46441120 None:intergenic
ACAAAGGTAACAAGGATGTT+GGG 0.417990 5_4:-46440838 None:intergenic
CATCATGAAGTGGAAAATCT+TGG 0.420380 5_4:-46441892 None:intergenic
TCTTACCTCTCCAATAATGA+TGG 0.427830 5_4:+46442444 Msa0854170:CDS
TTCATTGTATTATCTTCTAA+GGG 0.429198 5_4:+46442773 Msa0854170:three_prime_UTR
ATGTGAGTGGTGGGTGGAGG+AGG 0.429451 5_4:-46440739 None:intergenic
CAAATCAATGAAATTGTGAA+TGG 0.438970 5_4:+46442223 Msa0854170:CDS
CCTTTGTTGTCACGGAAGAA+TGG 0.441073 5_4:+46440854 Msa0854170:CDS
ACTATGTGAGTGGTGGGTGG+AGG 0.445074 5_4:-46440742 None:intergenic
TCCATTGAATGTAGGAAAGT+TGG 0.445994 5_4:+46442859 Msa0854170:three_prime_UTR
TGGTGGGTCGGAGTTGATGA+TGG 0.447434 5_4:-46440881 None:intergenic
CATTACTATGTCACCAATGA+AGG 0.449488 5_4:-46438349 None:intergenic
AACGTTATTCCCTCCGAAGA+AGG 0.450034 5_4:+46440940 Msa0854170:CDS
AGTTTGCATAGGTTCATCAT+TGG 0.450906 5_4:-46440799 None:intergenic
GTGGGTGGAGGAGGATTTGG+AGG 0.452077 5_4:-46440730 None:intergenic
GTTTGCATAGGTTCATCATT+GGG 0.452384 5_4:-46440798 None:intergenic
CTAAGTGGAAAGATATTTGT+GGG 0.454247 5_4:+46442296 Msa0854170:CDS
GGGTTGATGTGGCCTCGACC+TGG 0.457192 5_4:-46440778 None:intergenic
GGGAATAACGTTTGGGATGG+TGG 0.466198 5_4:-46440929 None:intergenic
GAGCTAATTCTAACAATCTA+CGG 0.466397 5_4:-46441928 None:intergenic
TAGAAGATTTATGGATTTGG+AGG 0.468592 5_4:+46442579 Msa0854170:CDS
TTGGAAGGTTGGGTGGAGAG+TGG 0.469852 5_4:+46442501 Msa0854170:CDS
TTTCTTGGTAATATATTACA+TGG 0.470876 5_4:+46442703 Msa0854170:CDS
TAGTTGAGGATTGGAAGGTT+GGG 0.475505 5_4:+46442491 Msa0854170:CDS
ATGTAATATATTACCAAGAA+AGG 0.476400 5_4:-46442701 None:intergenic
CTCCACTTGCAACTGCACTT+TGG 0.477952 5_4:-46442654 None:intergenic
TATGCATCAACACTCTCAAT+TGG 0.478373 5_4:-46442348 None:intergenic
CACAGTACACACATGCTTGA+AGG 0.478996 5_4:+46438379 Msa0854170:exon
GTAAGTATATAGTTGAGGAT+TGG 0.479235 5_4:+46442482 Msa0854170:CDS
TGTTGAATTCCACCCACAAT+GGG 0.479971 5_4:-46442392 None:intergenic
TTATAAGAGTTGCCAATAAG+AGG 0.492980 5_4:+46441091 Msa0854170:CDS
TGGGTGGAGAGTGGAGAAGG+AGG 0.497176 5_4:+46442510 Msa0854170:CDS
AGGAGGATTTGGAGGTTCCA+TGG 0.502238 5_4:-46440722 None:intergenic
ATTATTGGAGAGGTAAGAAA+AGG 0.507093 5_4:-46442439 None:intergenic
TATTGTGCTTTCTTCATCCA+TGG 0.508332 5_4:-46441962 None:intergenic
ACTATATACTTACTATTCAA+AGG 0.508938 5_4:-46442472 None:intergenic
AACAAAGGTAACAAGGATGT+TGG 0.510094 5_4:-46440839 None:intergenic
AAATTTAGTCCATTGAATGT+AGG 0.512146 5_4:+46442851 Msa0854170:three_prime_UTR
TCTAAGTGGAAAGATATTTG+TGG 0.514263 5_4:+46442295 Msa0854170:CDS
ATCAAGTTCAACATCTTGGC+TGG 0.514820 5_4:-46442119 None:intergenic
AAAGACTGCACTGCTGGAAG+TGG 0.517002 5_4:-46438403 None:intergenic
AGACGAATTGATGAGTTCCC+CGG 0.518887 5_4:-46441869 None:intergenic
TATACTTACTATTCAAAGGT+TGG 0.524591 5_4:-46442468 None:intergenic
CTTAGAAGATAATACAATGA+AGG 0.525113 5_4:-46442771 None:intergenic
TTGAGGATTGGAAGGTTGGG+TGG 0.527312 5_4:+46442494 Msa0854170:CDS
GTGTTGATGCATAGTGCTAT+AGG 0.529886 5_4:+46442358 Msa0854170:CDS
ATGTGGCCTCGACCTGGGTA+TGG 0.530456 5_4:-46440772 None:intergenic
ATTTGGAGGTTCCATGGAGA+TGG 0.532096 5_4:-46440716 None:intergenic
CTCAAAACATCAATTGCTTG+AGG 0.534158 5_4:-46442016 None:intergenic
CAGTGCAGTCTTTATTGAAG+AGG 0.534196 5_4:+46438413 Msa0854170:CDS
AGCTAATTCTAACAATCTAC+GGG 0.535491 5_4:-46441927 None:intergenic
GGTTCATCATTGGGTTGATG+TGG 0.536548 5_4:-46440789 None:intergenic
TGGCTAGATAATCAACCCAT+TGG 0.537035 5_4:+46442151 Msa0854170:CDS
GTTCCATGGAGATGGTGACT+TGG 0.537794 5_4:-46440708 None:intergenic
TTGCCTCGACCTTCTTCGGA+GGG 0.545928 5_4:-46440949 None:intergenic
GGGTGGAATTCAACAAGAGA+AGG 0.548966 5_4:+46442400 Msa0854170:CDS
TGACTAAAATAAGGTATGGT+AGG 0.550916 5_4:-46442073 None:intergenic
TATCGTCGTTTGGAGGAAAA+CGG 0.553208 5_4:+46441174 Msa0854170:CDS
ATGATGAAGTGAAGGAAATG+AGG 0.553298 5_4:+46442602 Msa0854170:CDS
CCTTGTTACCTTTGTTGTCA+CGG 0.554764 5_4:+46440846 Msa0854170:CDS
TAAGAAGAGATGAAATTGCT+AGG 0.556457 5_4:+46442551 Msa0854170:CDS
GAATAGTAAGTATATAGTTG+AGG 0.557074 5_4:+46442477 Msa0854170:CDS
GTATATAGTTGAGGATTGGA+AGG 0.557301 5_4:+46442486 Msa0854170:CDS
GGCTCAATTTCATATATGGA+AGG 0.559502 5_4:-46441995 None:intergenic
GCCGTGACTAAAATAAGGTA+TGG 0.560100 5_4:-46442077 None:intergenic
GACATATAGAACAGAACCAA+TGG 0.564420 5_4:-46442167 None:intergenic
TACTAACGAATCAAATTGAA+AGG 0.564741 5_4:-46442902 None:intergenic
TTGTTGAATTCCACCCACAA+TGG 0.566212 5_4:-46442393 None:intergenic
ACATATAGAACAGAACCAAT+GGG 0.568120 5_4:-46442166 None:intergenic
CAAAGTGCAGTTGCAAGTGG+AGG 0.573818 5_4:+46442655 Msa0854170:CDS
TAAACATTATCGTCGTTTGG+AGG 0.575710 5_4:+46441167 Msa0854170:CDS
GTGAATGGTTTGCGCGAAAG+TGG 0.585487 5_4:+46442238 Msa0854170:CDS
TCTCCAAGTCACCATCTCCA+TGG 0.586888 5_4:+46440705 Msa0854170:CDS
CAAAGGTAACAAGGATGTTG+GGG 0.590706 5_4:-46440837 None:intergenic
CTATCATGTATAATCACACT+CGG 0.591952 5_4:-46441054 None:intergenic
GGTTGATGTGGCCTCGACCT+GGG 0.592829 5_4:-46440777 None:intergenic
ATTCCCTCCGAAGAAGGTCG+AGG 0.594862 5_4:+46440946 Msa0854170:CDS
TGCCAAAGTGCAGTTGCAAG+TGG 0.599118 5_4:+46442652 Msa0854170:CDS
CCGTGACAACAAAGGTAACA+AGG 0.601448 5_4:-46440846 None:intergenic
CGTAAGCTCGCATCATGAAG+TGG 0.601654 5_4:-46441902 None:intergenic
TTTGCCTCGACCTTCTTCGG+AGG 0.601667 5_4:-46440950 None:intergenic
GTGATGCAATTGGCAATGGT+GGG 0.603212 5_4:+46438304 None:intergenic
GCCTCGACCTGGGTATGGTA+CGG 0.604546 5_4:-46440767 None:intergenic
TACGGCTACTATGTGAGTGG+TGG 0.605693 5_4:-46440749 None:intergenic
GCCGTACCATACCCAGGTCG+AGG 0.605968 5_4:+46440766 Msa0854170:CDS
GCTCAATTTCATATATGGAA+GGG 0.606891 5_4:-46441994 None:intergenic
TTGGTCCATCATTATTGGAG+AGG 0.607037 5_4:-46442449 None:intergenic
TCTGTTCTATATGTCTCACA+AGG 0.608612 5_4:+46442175 Msa0854170:CDS
ATGGATTCAAACCATAGAGT+AGG 0.609483 5_4:+46442722 Msa0854170:exon
ATCTTGGCTGGTGCTTAGAG+AGG 0.611306 5_4:-46442107 None:intergenic
CCATTCTTCCGTGACAACAA+AGG 0.612347 5_4:-46440854 None:intergenic
TTTGGAGGATGATGAAGTGA+AGG 0.614768 5_4:+46442594 Msa0854170:CDS
GGAGGGAATAACGTTTGGGA+TGG 0.617245 5_4:-46440932 None:intergenic
TCATTGTATTATCTTCTAAG+GGG 0.617835 5_4:+46442774 Msa0854170:three_prime_UTR
ACGGCTACTATGTGAGTGGT+GGG 0.620093 5_4:-46440748 None:intergenic
AAAGTGCAGTTGCAAGTGGA+GGG 0.620377 5_4:+46442656 Msa0854170:CDS
TGGAGATTAAGAGTTTGCAT+AGG 0.622718 5_4:-46440810 None:intergenic
AACGTGTGGATTACATTCCG+GGG 0.625241 5_4:+46441852 Msa0854170:CDS
TGCGTGGAGAAAGTTCTAAG+TGG 0.625771 5_4:+46442281 Msa0854170:CDS
ACTAACCTGAAGCATTTACT+GGG 0.632218 5_4:-46441203 None:intergenic
TAGCTCTCAATACCATACCA+TGG 0.643975 5_4:+46441945 Msa0854170:CDS
GCTACTATGTGAGTGGTGGG+TGG 0.649317 5_4:-46440745 None:intergenic
ATAGTAGCCGTACCATACCC+AGG 0.666075 5_4:+46440760 Msa0854170:CDS
AAAGTGGTGTTAGATTCTTG+TGG 0.666670 5_4:+46442254 Msa0854170:CDS
AGAAGTTGGTGACAAACGTG+TGG 0.670943 5_4:+46441838 Msa0854170:intron
TAAGTGGAAAGATATTTGTG+GGG 0.677407 5_4:+46442297 Msa0854170:CDS
AGATTCTTGTGGATAATGCG+TGG 0.682535 5_4:+46442265 Msa0854170:CDS
ACTCTCAATTGGTCACACCA+TGG 0.684804 5_4:-46442337 None:intergenic
TTGATGCATAGTGCTATAGG+TGG 0.705531 5_4:+46442361 Msa0854170:CDS
TGGTACGGCTACTATGTGAG+TGG 0.708329 5_4:-46440752 None:intergenic
CTGTTCTATATGTCTCACAA+GGG 0.733356 5_4:+46442176 Msa0854170:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTTTATTTTTATTTT+TGG - chr5_4:46441646-46441665 None:intergenic 0.0%
!! TATACATTGAAATAAATTAT+TGG + chr5_4:46438483-46438502 Msa0854170:intron 10.0%
!! ATACATTGAAATAAATTATT+GGG + chr5_4:46438484-46438503 Msa0854170:intron 10.0%
!! ATAAAAAAAAATTTACAGAA+AGG - chr5_4:46438551-46438570 None:intergenic 10.0%
!!! TTAAAACATTTTTTTTTACA+GGG - chr5_4:46438579-46438598 None:intergenic 10.0%
!!! TTTAAAACATTTTTTTTTAC+AGG - chr5_4:46438580-46438599 None:intergenic 10.0%
!!! TGTAAAAAAAAAAATTGTTT+TGG - chr5_4:46438687-46438706 None:intergenic 10.0%
!! TAATAAAATAAAATGATAGT+GGG - chr5_4:46439374-46439393 None:intergenic 10.0%
!! ATAATAAAATAAAATGATAG+TGG - chr5_4:46439375-46439394 None:intergenic 10.0%
!!! GTATATATCATTTTTATAAA+AGG + chr5_4:46439414-46439433 Msa0854170:intron 10.0%
!!! TATATAAATGAAAAATGTTT+TGG - chr5_4:46440503-46440522 None:intergenic 10.0%
!!! TTTTGTATTTAAATTAGTTA+GGG - chr5_4:46441578-46441597 None:intergenic 10.0%
!!! GATGCTTTATTATTTAATAT+TGG + chr5_4:46438512-46438531 Msa0854170:intron 15.0%
!!! TATTTAATATTGGTGATTTT+CGG + chr5_4:46438522-46438541 Msa0854170:intron 15.0%
!!! TAAAACATTTTTTTTTACAG+GGG - chr5_4:46438578-46438597 None:intergenic 15.0%
!! TCTGCAAAAAAAAAAAAAAT+TGG - chr5_4:46438629-46438648 None:intergenic 15.0%
!! AAAAAAATAAAAATTACAGG+AGG + chr5_4:46438719-46438738 Msa0854170:intron 15.0%
!! AAAAAATAAAAATTACAGGA+GGG + chr5_4:46438720-46438739 Msa0854170:intron 15.0%
!!! GTAAAATACTGTATTTTTTT+CGG + chr5_4:46438791-46438810 Msa0854170:intron 15.0%
!! ATAAAAGATTACAAATTCAA+GGG - chr5_4:46438884-46438903 None:intergenic 15.0%
!! TATAAAAGATTACAAATTCA+AGG - chr5_4:46438885-46438904 None:intergenic 15.0%
!!! GATTTTGTAGATTTATTTTT+TGG + chr5_4:46439667-46439686 Msa0854170:intron 15.0%
!!! TCTTTTTTTGACTAAATTTA+AGG + chr5_4:46441231-46441250 Msa0854170:intron 15.0%
!! TTTGTATTTAAATTAGTTAG+GGG - chr5_4:46441577-46441596 None:intergenic 15.0%
!!! GTTTTGTATTTAAATTAGTT+AGG - chr5_4:46441579-46441598 None:intergenic 15.0%
!!! TTTTGCATTTAAATTAGTTA+GGG + chr5_4:46441744-46441763 Msa0854170:intron 15.0%
!! TTGAACTTGATTATATAAAT+TGG + chr5_4:46442131-46442150 Msa0854170:CDS 15.0%
!!! AAAACATTTTTTTTTACAGG+GGG - chr5_4:46438577-46438596 None:intergenic 20.0%
!!! GTTTTAAAATAAACCCTAAT+AGG + chr5_4:46438592-46438611 Msa0854170:intron 20.0%
!!! TCATTTTTGATTGTTCTATT+AGG + chr5_4:46438654-46438673 Msa0854170:intron 20.0%
!!! CATTTTTGATTGTTCTATTA+GGG + chr5_4:46438655-46438674 Msa0854170:intron 20.0%
!!! ATTTTTGATTGTTCTATTAG+GGG + chr5_4:46438656-46438675 Msa0854170:intron 20.0%
!! TCAAAATTTGATTATTCATG+TGG + chr5_4:46439579-46439598 Msa0854170:intron 20.0%
!!! TTTCGGTTCTTTTAAAATTT+TGG + chr5_4:46440052-46440071 Msa0854170:intron 20.0%
!!! ATAAATGAAAAATGTTTTGG+CGG - chr5_4:46440500-46440519 None:intergenic 20.0%
!! AATCAAGTAGTTTCTTAAAT+GGG - chr5_4:46441020-46441039 None:intergenic 20.0%
!! TAAAGTGGTAAATAAAAGAA+AGG - chr5_4:46441259-46441278 None:intergenic 20.0%
!!! AAATGTTTTTTCTCTTAAAG+TGG - chr5_4:46441274-46441293 None:intergenic 20.0%
!! CTAAAAAATGCAAGTAAAAT+GGG - chr5_4:46441350-46441369 None:intergenic 20.0%
!! TTGTATTTAAATTAGTTAGG+GGG - chr5_4:46441576-46441595 None:intergenic 20.0%
!!! TTATTTTTATTTTTGGCCTT+GGG - chr5_4:46441639-46441658 None:intergenic 20.0%
!!! TTTATTTTTATTTTTGGCCT+TGG - chr5_4:46441640-46441659 None:intergenic 20.0%
!! AAAATAAAAAAAATGACACG+TGG + chr5_4:46441652-46441671 Msa0854170:intron 20.0%
!!! GTTTTGCATTTAAATTAGTT+AGG + chr5_4:46441743-46441762 Msa0854170:intron 20.0%
!! TTTGCATTTAAATTAGTTAG+GGG + chr5_4:46441745-46441764 Msa0854170:intron 20.0%
!! ACTATATACTTACTATTCAA+AGG - chr5_4:46442475-46442494 None:intergenic 20.0%
!!! AAAGGCTTTCATATTATTTT+CGG - chr5_4:46442686-46442705 None:intergenic 20.0%
!! ATGTAATATATTACCAAGAA+AGG - chr5_4:46442704-46442723 None:intergenic 20.0%
!!! TTTCTTGGTAATATATTACA+TGG + chr5_4:46442703-46442722 Msa0854170:CDS 20.0%
!! TTCATTGTATTATCTTCTAA+GGG + chr5_4:46442773-46442792 Msa0854170:three_prime_UTR 20.0%
!!! AGTAACACATTTTTAATGAA+AGG + chr5_4:46442921-46442940 Msa0854170:three_prime_UTR 20.0%
! CAATGTATAACAAACAAGAA+TGG - chr5_4:46438472-46438491 None:intergenic 25.0%
!!! TTTTTGATTGTTCTATTAGG+GGG + chr5_4:46438657-46438676 Msa0854170:intron 25.0%
! GAAATAACCTATATTACATG+AGG + chr5_4:46438749-46438768 Msa0854170:intron 25.0%
!!! AAAGAAAGTATCTTTTTGGT+GGG + chr5_4:46439267-46439286 Msa0854170:intron 25.0%
!!! TAAAATGATAGTGGGTATTA+TGG - chr5_4:46439366-46439385 None:intergenic 25.0%
! ATAAAAACAGCAATAGGAAA+AGG - chr5_4:46439701-46439720 None:intergenic 25.0%
!!! TTTTCCTATTGCTGTTTTTA+TGG + chr5_4:46439700-46439719 Msa0854170:intron 25.0%
! AGTAATTGTTCGATTAAGAT+TGG - chr5_4:46439941-46439960 None:intergenic 25.0%
! GTGATATTGAAAGAAGAAAT+TGG + chr5_4:46439988-46440007 Msa0854170:intron 25.0%
! AATATTGAAAGAACACAAAC+TGG + chr5_4:46440016-46440035 Msa0854170:intron 25.0%
! TTGTATTAAGAGATTAGACT+TGG - chr5_4:46440244-46440263 None:intergenic 25.0%
! AACGAATGAAATGAATAGAA+AGG - chr5_4:46440285-46440304 None:intergenic 25.0%
! TCATTTATATATGCGTTAGT+TGG + chr5_4:46440512-46440531 Msa0854170:intron 25.0%
! TTATTGTTGAGTAATAGTGA+AGG - chr5_4:46440599-46440618 None:intergenic 25.0%
!!! AGTGAAAGATAATGGAATTA+TGG - chr5_4:46440686-46440705 None:intergenic 25.0%
! GAATCAAGTAGTTTCTTAAA+TGG - chr5_4:46441021-46441040 None:intergenic 25.0%
!! TACATGATAGCTATTTGTTT+TGG + chr5_4:46441067-46441086 Msa0854170:CDS 25.0%
!!! ACATGATAGCTATTTGTTTT+GGG + chr5_4:46441068-46441087 Msa0854170:CDS 25.0%
!! AGTGTTTTCTTTCTTTCTAA+AGG - chr5_4:46441321-46441340 None:intergenic 25.0%
! CCTAAAAAATGCAAGTAAAA+TGG - chr5_4:46441351-46441370 None:intergenic 25.0%
!!! CCATTTTACTTGCATTTTTT+AGG + chr5_4:46441348-46441367 Msa0854170:intron 25.0%
! TTAGGAAAAATTCACAATCT+TGG + chr5_4:46441366-46441385 Msa0854170:intron 25.0%
!! TAGTTTATGGACTAAATCAA+TGG + chr5_4:46441451-46441470 Msa0854170:intron 25.0%
!!! TATTTTTATTTTTGGCCTTG+GGG - chr5_4:46441638-46441657 None:intergenic 25.0%
! TTGCATTTAAATTAGTTAGG+GGG + chr5_4:46441746-46441765 Msa0854170:intron 25.0%
! TCTATACCAATTTACACAAT+TGG + chr5_4:46442049-46442068 Msa0854170:CDS 25.0%
! TATAATCAAGTTCAACATCT+TGG - chr5_4:46442126-46442145 None:intergenic 25.0%
! CAAATCAATGAAATTGTGAA+TGG + chr5_4:46442223-46442242 Msa0854170:CDS 25.0%
! TATACTTACTATTCAAAGGT+TGG - chr5_4:46442471-46442490 None:intergenic 25.0%
! GAATAGTAAGTATATAGTTG+AGG + chr5_4:46442477-46442496 Msa0854170:CDS 25.0%
! TGTTAGAAGATTTATGGATT+TGG + chr5_4:46442576-46442595 Msa0854170:CDS 25.0%
! AATAATATGAAAGCCTTTCT+TGG + chr5_4:46442688-46442707 Msa0854170:CDS 25.0%
! CTTAGAAGATAATACAATGA+AGG - chr5_4:46442774-46442793 None:intergenic 25.0%
! CTTCATTGTATTATCTTCTA+AGG + chr5_4:46442772-46442791 Msa0854170:three_prime_UTR 25.0%
! TCATTGTATTATCTTCTAAG+GGG + chr5_4:46442774-46442793 Msa0854170:three_prime_UTR 25.0%
! AAATTTAGTCCATTGAATGT+AGG + chr5_4:46442851-46442870 Msa0854170:three_prime_UTR 25.0%
! TACTAACGAATCAAATTGAA+AGG - chr5_4:46442905-46442924 None:intergenic 25.0%
AATGATTTGAATGCCTTCAT+TGG + chr5_4:46438336-46438355 Msa0854170:five_prime_UTR 30.0%
! GGTTTTTGAATGACCTATTA+GGG - chr5_4:46438608-46438627 None:intergenic 30.0%
! TGGTTTTTGAATGACCTATT+AGG - chr5_4:46438609-46438628 None:intergenic 30.0%
AAAAATTACAGGAGGGAAAT+CGG + chr5_4:46438727-46438746 Msa0854170:intron 30.0%
TGCTTTACCTCATGTAATAT+AGG - chr5_4:46438759-46438778 None:intergenic 30.0%
!! TTGATCGTTTCTTTAACTTG+AGG - chr5_4:46438950-46438969 None:intergenic 30.0%
AATAGACATAAATAGTGACG+TGG - chr5_4:46439109-46439128 None:intergenic 30.0%
CCATAAACTTTCCATTCTTT+AGG - chr5_4:46439206-46439225 None:intergenic 30.0%
CCTAAAGAATGGAAAGTTTA+TGG + chr5_4:46439203-46439222 Msa0854170:intron 30.0%
AAAACATTCTTTCCCTTGTT+TGG + chr5_4:46439227-46439246 Msa0854170:intron 30.0%
!!! GTGGAAAGAAAGTATCTTTT+TGG + chr5_4:46439263-46439282 Msa0854170:intron 30.0%
!!! GAAAGAAAGTATCTTTTTGG+TGG + chr5_4:46439266-46439285 Msa0854170:intron 30.0%
!!! AAAATCTTTCCCTGCTTTTT+TGG + chr5_4:46439300-46439319 Msa0854170:intron 30.0%
TAGTGAAAGTGAATAGAAAG+TGG - chr5_4:46439480-46439499 None:intergenic 30.0%
AGCAATGACATATCAAACTA+TGG - chr5_4:46439605-46439624 None:intergenic 30.0%
! TGTCATTGCTTACATCATTT+TGG + chr5_4:46439615-46439634 Msa0854170:intron 30.0%
ACAAAATCTAACTAACCTGA+TGG - chr5_4:46439655-46439674 None:intergenic 30.0%
!!! TGTAGATTTATTTTTTGGCC+TGG + chr5_4:46439672-46439691 Msa0854170:intron 30.0%
AATGCCATAAAAACAGCAAT+AGG - chr5_4:46439707-46439726 None:intergenic 30.0%
!!! TGGTTTTTTATCAGTATGCA+AGG + chr5_4:46439743-46439762 Msa0854170:intron 30.0%
!!! GGTTTTTTATCAGTATGCAA+GGG + chr5_4:46439744-46439763 Msa0854170:intron 30.0%
TAAAAGAACCGAAAAACAGT+CGG - chr5_4:46440046-46440065 None:intergenic 30.0%
!! GATTTCATCACTTTTGTAGA+GGG + chr5_4:46440534-46440553 Msa0854170:intron 30.0%
! TTTTATGTGGTTACTCTAGA+TGG + chr5_4:46440567-46440586 Msa0854170:intron 30.0%
!!! TTGATGTTGTTGTTTGGTTT+TGG - chr5_4:46440904-46440923 None:intergenic 30.0%
TGAAGCTGTTATGACTAAAA+TGG + chr5_4:46440990-46441009 Msa0854170:CDS 30.0%
CTATCATGTATAATCACACT+CGG - chr5_4:46441057-46441076 None:intergenic 30.0%
TTATAAGAGTTGCCAATAAG+AGG + chr5_4:46441091-46441110 Msa0854170:CDS 30.0%
TCTTAAACATTATCGTCGTT+TGG + chr5_4:46441164-46441183 Msa0854170:CDS 30.0%
ACATTTATGATTTAGCTACC+TGG + chr5_4:46441288-46441307 Msa0854170:intron 30.0%
CATTTATGATTTAGCTACCT+GGG + chr5_4:46441289-46441308 Msa0854170:intron 30.0%
AACTATACCTCTCTCTAATT+CGG - chr5_4:46441436-46441455 None:intergenic 30.0%
! TTAGAGAGAGGTATAGTTTA+TGG + chr5_4:46441438-46441457 Msa0854170:intron 30.0%
CACACAAAACACTTAATAGA+TGG - chr5_4:46441494-46441513 None:intergenic 30.0%
!!! GTGTTTTGTGTGTTGTTTAA+AGG + chr5_4:46441502-46441521 Msa0854170:intron 30.0%
! TAAAGGCTTAATTGCACTTT+TGG + chr5_4:46441519-46441538 Msa0854170:intron 30.0%
CCAAAGATTCAATACTTAAG+GGG - chr5_4:46441604-46441623 None:intergenic 30.0%
GCCAAAGATTCAATACTTAA+GGG - chr5_4:46441605-46441624 None:intergenic 30.0%
TGCCAAAGATTCAATACTTA+AGG - chr5_4:46441716-46441735 None:intergenic 30.0%
! TATTGAATCTTTGGCAGTTT+TGG + chr5_4:46441610-46441629 Msa0854170:intron 30.0%
!!! ATTTTTATTTTTGGCCTTGG+GGG - chr5_4:46441637-46441656 None:intergenic 30.0%
! TATTGAATCTTTGGCAGTTT+TGG - chr5_4:46441610-46441629 None:intergenic 30.0%
TGCCAAAGATTCAATACTTA+GGG + chr5_4:46441716-46441735 Msa0854170:intron 30.0%
AGCTAATTCTAACAATCTAC+GGG - chr5_4:46441930-46441949 None:intergenic 30.0%
GAGCTAATTCTAACAATCTA+CGG - chr5_4:46441931-46441950 None:intergenic 30.0%
GCTCAATTTCATATATGGAA+GGG - chr5_4:46441997-46442016 None:intergenic 30.0%
TTGAGGCTCAATTTCATATA+TGG - chr5_4:46442002-46442021 None:intergenic 30.0%
TGACTAAAATAAGGTATGGT+AGG - chr5_4:46442076-46442095 None:intergenic 30.0%
!!! ACCATACCTTATTTTAGTCA+CGG + chr5_4:46442076-46442095 Msa0854170:CDS 30.0%
ACATATAGAACAGAACCAAT+GGG - chr5_4:46442169-46442188 None:intergenic 30.0%
TCTAAGTGGAAAGATATTTG+TGG + chr5_4:46442295-46442314 Msa0854170:CDS 30.0%
CTAAGTGGAAAGATATTTGT+GGG + chr5_4:46442296-46442315 Msa0854170:CDS 30.0%
TAAGTGGAAAGATATTTGTG+GGG + chr5_4:46442297-46442316 Msa0854170:CDS 30.0%
AAAGATATTTGTGGGGAAAA+AGG + chr5_4:46442304-46442323 Msa0854170:CDS 30.0%
AAGATATTTGTGGGGAAAAA+GGG + chr5_4:46442305-46442324 Msa0854170:CDS 30.0%
ATTATTGGAGAGGTAAGAAA+AGG - chr5_4:46442442-46442461 None:intergenic 30.0%
GTAAGTATATAGTTGAGGAT+TGG + chr5_4:46442482-46442501 Msa0854170:CDS 30.0%
TAAGAAGAGATGAAATTGCT+AGG + chr5_4:46442551-46442570 Msa0854170:CDS 30.0%
!! TAGGCTTGTTAGAAGATTTA+TGG + chr5_4:46442570-46442589 Msa0854170:CDS 30.0%
TAGAAGATTTATGGATTTGG+AGG + chr5_4:46442579-46442598 Msa0854170:CDS 30.0%
TATATCTTACTCCTACTCTA+TGG - chr5_4:46442736-46442755 None:intergenic 30.0%
!! CATTCAATGGACTAAATTTC+AGG - chr5_4:46442850-46442869 None:intergenic 30.0%
CATTACTATGTCACCAATGA+AGG - chr5_4:46438352-46438371 None:intergenic 35.0%
!!! CGGTTGATTCACTTTGTTTT+TGG + chr5_4:46438811-46438830 Msa0854170:intron 35.0%
GTTACACTTTCCCAAAACTT+AGG + chr5_4:46439143-46439162 Msa0854170:intron 35.0%
! TTGGTAACATGGATAGATCA+AGG + chr5_4:46439172-46439191 Msa0854170:intron 35.0%
AGGAAAGAAAGCCTAAAGAA+TGG + chr5_4:46439192-46439211 Msa0854170:intron 35.0%
CTTACAAAGCAACCAAACAA+GGG - chr5_4:46439242-46439261 None:intergenic 35.0%
TCTTACAAAGCAACCAAACA+AGG - chr5_4:46439243-46439262 None:intergenic 35.0%
! CAGGGAAAGATTTTAGACAT+GGG - chr5_4:46439294-46439313 None:intergenic 35.0%
! TGGTCTTTTCACTCAAAAGT+TGG - chr5_4:46439346-46439365 None:intergenic 35.0%
GAAAGTGAATAGAAAGTGGA+AGG - chr5_4:46439476-46439495 None:intergenic 35.0%
GAAAGGATTAGGAAAGTGAA+TGG - chr5_4:46439535-46439554 None:intergenic 35.0%
GTATGAGGAAAGAAAGGATT+AGG - chr5_4:46439546-46439565 None:intergenic 35.0%
! GTGAAAGTATGAGGAAAGAA+AGG - chr5_4:46439552-46439571 None:intergenic 35.0%
! CATTGCTTACATCATTTTGG+AGG + chr5_4:46439618-46439637 Msa0854170:intron 35.0%
TAAAAAACCAGCAGCTATGA+TGG - chr5_4:46439733-46439752 None:intergenic 35.0%
ATGTGATCTTCCACGTATTT+GGG + chr5_4:46439854-46439873 Msa0854170:intron 35.0%
ATCACAATATCCCAAATACG+TGG - chr5_4:46439867-46439886 None:intergenic 35.0%
! ACGTATTTGGGATATTGTGA+TGG + chr5_4:46439866-46439885 Msa0854170:intron 35.0%
! CGAGAGTAAAAGACTCATTT+TGG - chr5_4:46440082-46440101 None:intergenic 35.0%
! GACTATGTGGTTAGTGATTT+TGG - chr5_4:46440211-46440230 None:intergenic 35.0%
!! GGATTTCATCACTTTTGTAG+AGG + chr5_4:46440533-46440552 Msa0854170:intron 35.0%
! GGGATTCATACACTTTTATG+TGG + chr5_4:46440554-46440573 Msa0854170:intron 35.0%
ACTTGGAGAGTGAAAGATAA+TGG - chr5_4:46440694-46440713 None:intergenic 35.0%
GTTTGCATAGGTTCATCATT+GGG - chr5_4:46440801-46440820 None:intergenic 35.0%
AGTTTGCATAGGTTCATCAT+TGG - chr5_4:46440802-46440821 None:intergenic 35.0%
TGGAGATTAAGAGTTTGCAT+AGG - chr5_4:46440813-46440832 None:intergenic 35.0%
ACAAAGGTAACAAGGATGTT+GGG - chr5_4:46440841-46440860 None:intergenic 35.0%
AACAAAGGTAACAAGGATGT+TGG - chr5_4:46440842-46440861 None:intergenic 35.0%
!!! TGTTGTTGTTTGGTTTTGGT+GGG - chr5_4:46440900-46440919 None:intergenic 35.0%
!!! ATGTTGTTGTTTGGTTTTGG+TGG - chr5_4:46440901-46440920 None:intergenic 35.0%
! GCGAATTTGATGTTGTTGTT+TGG - chr5_4:46440910-46440929 None:intergenic 35.0%
AACAGGAACATTCCTCTTAT+TGG - chr5_4:46441106-46441125 None:intergenic 35.0%
TAAACATTATCGTCGTTTGG+AGG + chr5_4:46441167-46441186 Msa0854170:CDS 35.0%
! ACTAACCTGAAGCATTTACT+GGG - chr5_4:46441206-46441225 None:intergenic 35.0%
! AACTAACCTGAAGCATTTAC+TGG - chr5_4:46441207-46441226 None:intergenic 35.0%
! CTTTCTAAAGGAATATTCCC+AGG - chr5_4:46441309-46441328 None:intergenic 35.0%
!! CCCCTTAAGTATTGAATCTT+TGG + chr5_4:46441601-46441620 Msa0854170:intron 35.0%
!!! TTTTTATTTTTGGCCTTGGG+GGG - chr5_4:46441636-46441655 None:intergenic 35.0%
CTGCCAAAGATTCAATACTT+AGG + chr5_4:46441715-46441734 Msa0854170:intron 35.0%
GCCAAAGATTCAATACTTAG+GGG + chr5_4:46441717-46441736 Msa0854170:intron 35.0%
CCAAAGATTCAATACTTAGG+GGG + chr5_4:46441718-46441737 Msa0854170:intron 35.0%
!! ACCGCAAGTTTTGTAAAGAT+AGG + chr5_4:46441774-46441793 Msa0854170:intron 35.0%
CCCTATCTTTACAAAACTTG+CGG - chr5_4:46441778-46441797 None:intergenic 35.0%
!! CCGCAAGTTTTGTAAAGATA+GGG + chr5_4:46441775-46441794 Msa0854170:intron 35.0%
!! CGCAAGTTTTGTAAAGATAG+GGG + chr5_4:46441776-46441795 Msa0854170:intron 35.0%
!! GCAAGTTTTGTAAAGATAGG+GGG + chr5_4:46441777-46441796 Msa0854170:intron 35.0%
! ACAAGGCTTAATTGCACTTT+TGG - chr5_4:46441803-46441822 None:intergenic 35.0%
! CTGTTGCAGCATTTTAAACA+AGG - chr5_4:46441820-46441839 None:intergenic 35.0%
TAAAATGCTGCAACAGAAGT+TGG + chr5_4:46441824-46441843 Msa0854170:intron 35.0%
CATCATGAAGTGGAAAATCT+TGG - chr5_4:46441895-46441914 None:intergenic 35.0%
TATTGTGCTTTCTTCATCCA+TGG - chr5_4:46441965-46441984 None:intergenic 35.0%
GGCTCAATTTCATATATGGA+AGG - chr5_4:46441998-46442017 None:intergenic 35.0%
CTCAAAACATCAATTGCTTG+AGG - chr5_4:46442019-46442038 None:intergenic 35.0%
GTAGGTCCAATTGTGTAAAT+TGG - chr5_4:46442058-46442077 None:intergenic 35.0%
ATTTGGCCGTGACTAAAATA+AGG - chr5_4:46442085-46442104 None:intergenic 35.0%
GACATATAGAACAGAACCAA+TGG - chr5_4:46442170-46442189 None:intergenic 35.0%
TCTGTTCTATATGTCTCACA+AGG + chr5_4:46442175-46442194 Msa0854170:CDS 35.0%
CTGTTCTATATGTCTCACAA+GGG + chr5_4:46442176-46442195 Msa0854170:CDS 35.0%
! AAAGTGGTGTTAGATTCTTG+TGG + chr5_4:46442254-46442273 Msa0854170:CDS 35.0%
!!! AAAAAGGGTTTGTTTTGCCA+TGG + chr5_4:46442320-46442339 Msa0854170:CDS 35.0%
TATGCATCAACACTCTCAAT+TGG - chr5_4:46442351-46442370 None:intergenic 35.0%
! ATAGTGCTATAGGTGGTTTT+TGG + chr5_4:46442368-46442387 Msa0854170:CDS 35.0%
!!! ACAAGAGAAGGTTTGTTTTG+TGG + chr5_4:46442412-46442431 Msa0854170:CDS 35.0%
TCTTACCTCTCCAATAATGA+TGG + chr5_4:46442444-46442463 Msa0854170:CDS 35.0%
! AAAGGTTGGTCCATCATTAT+TGG - chr5_4:46442457-46442476 None:intergenic 35.0%
GTATATAGTTGAGGATTGGA+AGG + chr5_4:46442486-46442505 Msa0854170:CDS 35.0%
ATGATGAAGTGAAGGAAATG+AGG + chr5_4:46442602-46442621 Msa0854170:CDS 35.0%
ATGGATTCAAACCATAGAGT+AGG + chr5_4:46442722-46442741 Msa0854170:exon 35.0%
TCCATTGAATGTAGGAAAGT+TGG + chr5_4:46442859-46442878 Msa0854170:three_prime_UTR 35.0%
ACCAACTTTCCTACATTCAA+TGG - chr5_4:46442863-46442882 None:intergenic 35.0%
TTCAATAAAGACTGCACTGC+TGG - chr5_4:46438412-46438431 None:intergenic 40.0%
CAGTGCAGTCTTTATTGAAG+AGG + chr5_4:46438413-46438432 Msa0854170:CDS 40.0%
! CCAAACACAGCCTAAGTTTT+GGG - chr5_4:46439156-46439175 None:intergenic 40.0%
! ACCAAACACAGCCTAAGTTT+TGG - chr5_4:46439157-46439176 None:intergenic 40.0%
! TTAGGCTGTGTTTGGTAACA+TGG + chr5_4:46439161-46439180 Msa0854170:intron 40.0%
! GTTTGGTTGCTTTGTAAGAG+TGG + chr5_4:46439244-46439263 Msa0854170:intron 40.0%
! GCAGGGAAAGATTTTAGACA+TGG - chr5_4:46439295-46439314 None:intergenic 40.0%
!!! TCTTTCCCTGCTTTTTTGGA+CGG + chr5_4:46439304-46439323 Msa0854170:intron 40.0%
! GACTAGAGAGTGAAAGTATG+AGG - chr5_4:46439561-46439580 None:intergenic 40.0%
ATATTGAACAACCACGCACT+GGG - chr5_4:46439807-46439826 None:intergenic 40.0%
TATATTGAACAACCACGCAC+TGG - chr5_4:46439808-46439827 None:intergenic 40.0%
GATGTGATCTTCCACGTATT+TGG + chr5_4:46439853-46439872 Msa0854170:intron 40.0%
TAACCACATAGTCACCTAAG+TGG + chr5_4:46440218-46440237 Msa0854170:intron 40.0%
CAAAGGTAACAAGGATGTTG+GGG - chr5_4:46440840-46440859 None:intergenic 40.0%
! CCTTGTTACCTTTGTTGTCA+CGG + chr5_4:46440846-46440865 Msa0854170:CDS 40.0%
TATCGTCGTTTGGAGGAAAA+CGG + chr5_4:46441174-46441193 Msa0854170:CDS 40.0%
GATTACCCAGTAAATGCTTC+AGG + chr5_4:46441198-46441217 Msa0854170:CDS 40.0%
TCACAATCTTGGTATGCTTC+AGG + chr5_4:46441377-46441396 Msa0854170:intron 40.0%
CACAATCTTGGTATGCTTCA+GGG + chr5_4:46441378-46441397 Msa0854170:intron 40.0%
ACAATCTTGGTATGCTTCAG+GGG + chr5_4:46441379-46441398 Msa0854170:intron 40.0%
TTAGGAACCGAATTAGAGAG+AGG + chr5_4:46441426-46441445 Msa0854170:intron 40.0%
!!! GCAAGTTTTGGAAAGATAGG+GGG - chr5_4:46441545-46441564 None:intergenic 40.0%
!!! CGCAAGTTTTGGAAAGATAG+GGG - chr5_4:46441546-46441565 None:intergenic 40.0%
!!! CCGCAAGTTTTGGAAAGATA+GGG - chr5_4:46441547-46441566 None:intergenic 40.0%
CCCTATCTTTCCAAAACTTG+CGG + chr5_4:46441544-46441563 Msa0854170:intron 40.0%
!!! ACCGCAAGTTTTGGAAAGAT+AGG - chr5_4:46441548-46441567 None:intergenic 40.0%
!! CCCCCTAAGTATTGAATCTT+TGG - chr5_4:46441721-46441740 None:intergenic 40.0%
! CAAACGTGTGGATTACATTC+CGG + chr5_4:46441850-46441869 Msa0854170:CDS 40.0%
! AAACGTGTGGATTACATTCC+GGG + chr5_4:46441851-46441870 Msa0854170:CDS 40.0%
TAGCTCTCAATACCATACCA+TGG + chr5_4:46441945-46441964 Msa0854170:CDS 40.0%
TGCTTTCTTCATCCATGGTA+TGG - chr5_4:46441960-46441979 None:intergenic 40.0%
GCCGTGACTAAAATAAGGTA+TGG - chr5_4:46442080-46442099 None:intergenic 40.0%
ATCAAGTTCAACATCTTGGC+TGG - chr5_4:46442122-46442141 None:intergenic 40.0%
TGGCTAGATAATCAACCCAT+TGG + chr5_4:46442151-46442170 Msa0854170:CDS 40.0%
! CTCACAAGGGAGTTTTCTTT+CGG + chr5_4:46442189-46442208 Msa0854170:CDS 40.0%
AGATTCTTGTGGATAATGCG+TGG + chr5_4:46442265-46442284 Msa0854170:CDS 40.0%
! GTGTTGATGCATAGTGCTAT+AGG + chr5_4:46442358-46442377 Msa0854170:CDS 40.0%
TTGATGCATAGTGCTATAGG+TGG + chr5_4:46442361-46442380 Msa0854170:CDS 40.0%
TGTTGAATTCCACCCACAAT+GGG - chr5_4:46442395-46442414 None:intergenic 40.0%
TTGTTGAATTCCACCCACAA+TGG - chr5_4:46442396-46442415 None:intergenic 40.0%
TTGGTCCATCATTATTGGAG+AGG - chr5_4:46442452-46442471 None:intergenic 40.0%
ATAGTTGAGGATTGGAAGGT+TGG + chr5_4:46442490-46442509 Msa0854170:CDS 40.0%
TAGTTGAGGATTGGAAGGTT+GGG + chr5_4:46442491-46442510 Msa0854170:CDS 40.0%
TTTGGAGGATGATGAAGTGA+AGG + chr5_4:46442594-46442613 Msa0854170:CDS 40.0%
CACAGTACACACATGCTTGA+AGG + chr5_4:46438379-46438398 Msa0854170:exon 45.0%
AGTTGTTAGACAACCTCGTG+TGG + chr5_4:46438985-46439004 Msa0854170:intron 45.0%
TTCATTTCATGTGCCACACG+AGG - chr5_4:46439001-46439020 None:intergenic 45.0%
CCCAAAACTTAGGCTGTGTT+TGG + chr5_4:46439153-46439172 Msa0854170:intron 45.0%
CCTTTCCGTCCAAAAAAGCA+GGG - chr5_4:46439312-46439331 None:intergenic 45.0%
TCCTTTCCGTCCAAAAAAGC+AGG - chr5_4:46439313-46439332 None:intergenic 45.0%
GAGGAGAAAGAGAAACCATC+AGG + chr5_4:46439637-46439656 Msa0854170:intron 45.0%
AGCAATAGGAAAAGGCTACC+AGG - chr5_4:46439693-46439712 None:intergenic 45.0%
CATTAGTCCATCATAGCTGC+TGG + chr5_4:46439723-46439742 Msa0854170:intron 45.0%
! GGGAGTGCAAAATGGTTTCA+AGG - chr5_4:46439787-46439806 None:intergenic 45.0%
! CGTCACGTGATCACACATTT+TGG - chr5_4:46439969-46439988 None:intergenic 45.0%
!! CTGGATCACCGACTGTTTTT+CGG + chr5_4:46440035-46440054 Msa0854170:intron 45.0%
GAGATTAGACTTGGCCACTT+AGG - chr5_4:46440235-46440254 None:intergenic 45.0%
TCGTTCTACCTACACACTTG+CGG + chr5_4:46440300-46440319 Msa0854170:intron 45.0%
ATTTGGAGGTTCCATGGAGA+TGG - chr5_4:46440719-46440738 None:intergenic 45.0%
!! GGTTCATCATTGGGTTGATG+TGG - chr5_4:46440792-46440811 None:intergenic 45.0%
AACAAGGATGTTGGGGTTGT+TGG - chr5_4:46440833-46440852 None:intergenic 45.0%
CCGTGACAACAAAGGTAACA+AGG - chr5_4:46440849-46440868 None:intergenic 45.0%
CCATTCTTCCGTGACAACAA+AGG - chr5_4:46440857-46440876 None:intergenic 45.0%
! CCTTTGTTGTCACGGAAGAA+TGG + chr5_4:46440854-46440873 Msa0854170:CDS 45.0%
!!! GTTGTTTGGTTTTGGTGGGT+CGG - chr5_4:46440896-46440915 None:intergenic 45.0%
CTTCGGAGGGAATAACGTTT+GGG - chr5_4:46440939-46440958 None:intergenic 45.0%
TCTTCGGAGGGAATAACGTT+TGG - chr5_4:46440940-46440959 None:intergenic 45.0%
AACGTTATTCCCTCCGAAGA+AGG + chr5_4:46440940-46440959 Msa0854170:CDS 45.0%
ATCTTTGCCTCGACCTTCTT+CGG - chr5_4:46440956-46440975 None:intergenic 45.0%
! ATGTTCCTGTTGCGTCGTTT+TGG + chr5_4:46441115-46441134 Msa0854170:CDS 45.0%
AGAAAAAACGACGCCGACAT+AGG - chr5_4:46441141-46441160 None:intergenic 45.0%
!! AGAAGTTGGTGACAAACGTG+TGG + chr5_4:46441838-46441857 Msa0854170:intron 45.0%
! AACGTGTGGATTACATTCCG+GGG + chr5_4:46441852-46441871 Msa0854170:CDS 45.0%
AGACGAATTGATGAGTTCCC+CGG - chr5_4:46441872-46441891 None:intergenic 45.0%
TGGTGCTTAGAGAGGCAATT+TGG - chr5_4:46442102-46442121 None:intergenic 45.0%
!! TGCGTGGAGAAAGTTCTAAG+TGG + chr5_4:46442281-46442300 Msa0854170:CDS 45.0%
ACTCTCAATTGGTCACACCA+TGG - chr5_4:46442340-46442359 None:intergenic 45.0%
!!! GTGGTTTTTGGTCCCATTGT+GGG + chr5_4:46442380-46442399 Msa0854170:CDS 45.0%
GGGTGGAATTCAACAAGAGA+AGG + chr5_4:46442400-46442419 Msa0854170:CDS 45.0%
AAAGTGCAGTTGCAAGTGGA+GGG + chr5_4:46442656-46442675 Msa0854170:CDS 45.0%
!! ATAAAAAAAATAAAAATTAC+AGG + chr5_4:46438716-46438735 Msa0854170:intron 5.0%
!!! TATATATCATTTTTATAAAA+GGG + chr5_4:46439415-46439434 Msa0854170:intron 5.0%
!! ATTATATTGATATATAATTT+AGG + chr5_4:46441408-46441427 Msa0854170:intron 5.0%
AAAGACTGCACTGCTGGAAG+TGG - chr5_4:46438406-46438425 None:intergenic 50.0%
!!! CCCTGCTTTTTTGGACGGAA+AGG + chr5_4:46439309-46439328 Msa0854170:intron 50.0%
TGGCCACTTAGGTGACTATG+TGG - chr5_4:46440224-46440243 None:intergenic 50.0%
CGAACATACCGCAAGTGTGT+AGG - chr5_4:46440311-46440330 None:intergenic 50.0%
GCGGTATGTTCGTCTGACTA+TGG + chr5_4:46440319-46440338 Msa0854170:intron 50.0%
TCTCCAAGTCACCATCTCCA+TGG + chr5_4:46440705-46440724 Msa0854170:CDS 50.0%
GTTCCATGGAGATGGTGACT+TGG - chr5_4:46440711-46440730 None:intergenic 50.0%
AGGAGGATTTGGAGGTTCCA+TGG - chr5_4:46440725-46440744 None:intergenic 50.0%
ACGGCTACTATGTGAGTGGT+GGG - chr5_4:46440751-46440770 None:intergenic 50.0%
TACGGCTACTATGTGAGTGG+TGG - chr5_4:46440752-46440771 None:intergenic 50.0%
TGGTACGGCTACTATGTGAG+TGG - chr5_4:46440755-46440774 None:intergenic 50.0%
ATAGTAGCCGTACCATACCC+AGG + chr5_4:46440760-46440779 Msa0854170:CDS 50.0%
! GGGAATAACGTTTGGGATGG+TGG - chr5_4:46440932-46440951 None:intergenic 50.0%
GGAGGGAATAACGTTTGGGA+TGG - chr5_4:46440935-46440954 None:intergenic 50.0%
ATAGGCCAAAACGACGCAAC+AGG - chr5_4:46441123-46441142 None:intergenic 50.0%
!! TGCGTCGTTTTGGCCTATGT+CGG + chr5_4:46441125-46441144 Msa0854170:CDS 50.0%
TGACACGTGGCACCTCATTT+AGG + chr5_4:46441665-46441684 Msa0854170:intron 50.0%
GACACGTGGCACCTCATTTA+GGG + chr5_4:46441666-46441685 Msa0854170:intron 50.0%
CGTAAGCTCGCATCATGAAG+TGG - chr5_4:46441905-46441924 None:intergenic 50.0%
ATCTTGGCTGGTGCTTAGAG+AGG - chr5_4:46442110-46442129 None:intergenic 50.0%
! GTGAATGGTTTGCGCGAAAG+TGG + chr5_4:46442238-46442257 Msa0854170:CDS 50.0%
!!! GGTGGTTTTTGGTCCCATTG+TGG + chr5_4:46442379-46442398 Msa0854170:CDS 50.0%
!!! GTTTTTGGTCCCATTGTGGG+TGG + chr5_4:46442383-46442402 Msa0854170:CDS 50.0%
TTGAGGATTGGAAGGTTGGG+TGG + chr5_4:46442494-46442513 Msa0854170:CDS 50.0%
TGCCAAAGTGCAGTTGCAAG+TGG + chr5_4:46442652-46442671 Msa0854170:CDS 50.0%
CTCCACTTGCAACTGCACTT+TGG - chr5_4:46442657-46442676 None:intergenic 50.0%
CAAAGTGCAGTTGCAAGTGG+AGG + chr5_4:46442655-46442674 Msa0854170:CDS 50.0%
! CACGCACTGGGAGTGCAAAA+TGG - chr5_4:46439795-46439814 None:intergenic 55.0%
! CATTTTGCACTCCCAGTGCG+TGG + chr5_4:46439793-46439812 Msa0854170:intron 55.0%
!! ACTATGTGAGTGGTGGGTGG+AGG - chr5_4:46440745-46440764 None:intergenic 55.0%
! GCTACTATGTGAGTGGTGGG+TGG - chr5_4:46440748-46440767 None:intergenic 55.0%
!! TGGTGGGTCGGAGTTGATGA+TGG - chr5_4:46440884-46440903 None:intergenic 55.0%
ATTCCCTCCGAAGAAGGTCG+AGG + chr5_4:46440946-46440965 Msa0854170:CDS 55.0%
TTGCCTCGACCTTCTTCGGA+GGG - chr5_4:46440952-46440971 None:intergenic 55.0%
TTTGCCTCGACCTTCTTCGG+AGG - chr5_4:46440953-46440972 None:intergenic 55.0%
! GGGGCAGTAACCGCAAGTTT+TGG - chr5_4:46441557-46441576 None:intergenic 55.0%
CTGACGTGGCACCCTAAATG+AGG - chr5_4:46441680-46441699 None:intergenic 55.0%
TTGGAAGGTTGGGTGGAGAG+TGG + chr5_4:46442501-46442520 Msa0854170:CDS 55.0%
GTGGGTGGAGGAGGATTTGG+AGG - chr5_4:46440733-46440752 None:intergenic 60.0%
!! GTGGTGGGTGGAGGAGGATT+TGG - chr5_4:46440736-46440755 None:intergenic 60.0%
!! ATGTGAGTGGTGGGTGGAGG+AGG - chr5_4:46440742-46440761 None:intergenic 60.0%
GCCTCGACCTGGGTATGGTA+CGG - chr5_4:46440770-46440789 None:intergenic 60.0%
ATGTGGCCTCGACCTGGGTA+TGG - chr5_4:46440775-46440794 None:intergenic 60.0%
! GGTTGATGTGGCCTCGACCT+GGG - chr5_4:46440780-46440799 None:intergenic 60.0%
!! TTGGCAGTTTTGGCCCCCCA+AGG + chr5_4:46441620-46441639 Msa0854170:intron 60.0%
! TTAGGGTGCCACGTCAGCGT+TGG + chr5_4:46441683-46441702 Msa0854170:intron 60.0%
! TAGGGTGCCACGTCAGCGTT+GGG + chr5_4:46441684-46441703 Msa0854170:intron 60.0%
GGTTGGGTGGAGAGTGGAGA+AGG + chr5_4:46442507-46442526 Msa0854170:CDS 60.0%
TGGGTGGAGAGTGGAGAAGG+AGG + chr5_4:46442510-46442529 Msa0854170:CDS 60.0%
GCCGTACCATACCCAGGTCG+AGG + chr5_4:46440766-46440785 Msa0854170:CDS 65.0%
!! GGGTTGATGTGGCCTCGACC+TGG - chr5_4:46440781-46440800 None:intergenic 65.0%
! AGGGTGCCACGTCAGCGTTG+GGG + chr5_4:46441685-46441704 Msa0854170:intron 65.0%
TTTGGCCCCCAACGCTGACG+TGG - chr5_4:46441694-46441713 None:intergenic 65.0%
! GGGTGCCACGTCAGCGTTGG+GGG + chr5_4:46441686-46441705 Msa0854170:intron 70.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 46438319 46442961 46438319 ID=Msa0854170;Name=Msa0854170
chr5_4 mRNA 46438319 46442961 46438319 ID=Msa0854170-mRNA-1;Parent=Msa0854170;Name=Msa0854170-mRNA-1;_AED=0.42;_eAED=0.42;_QI=72|1|1|1|0.5|0.33|3|223|512
chr5_4 exon 46438319 46438434 46438319 ID=Msa0854170-mRNA-1:exon:14720;Parent=Msa0854170-mRNA-1
chr5_4 exon 46440624 46441219 46440624 ID=Msa0854170-mRNA-1:exon:14721;Parent=Msa0854170-mRNA-1
chr5_4 exon 46441840 46442961 46441840 ID=Msa0854170-mRNA-1:exon:14722;Parent=Msa0854170-mRNA-1
chr5_4 five_prime_UTR 46438319 46438390 46438319 ID=Msa0854170-mRNA-1:five_prime_utr;Parent=Msa0854170-mRNA-1
chr5_4 CDS 46438391 46438434 46438391 ID=Msa0854170-mRNA-1:cds;Parent=Msa0854170-mRNA-1
chr5_4 CDS 46440624 46441219 46440624 ID=Msa0854170-mRNA-1:cds;Parent=Msa0854170-mRNA-1
chr5_4 CDS 46441840 46442738 46441840 ID=Msa0854170-mRNA-1:cds;Parent=Msa0854170-mRNA-1
chr5_4 three_prime_UTR 46442739 46442961 46442739 ID=Msa0854170-mRNA-1:three_prime_utr;Parent=Msa0854170-mRNA-1
Gene Sequence

>Msa0854170

ATGCTTGAAGGTCCACTTCCAGCAGTGCAGTCTTTATTGAAGAGTATAATTTTGTTCTTTTCAATTCATTTCATTTCATACACTTTACATAGAAACTTATATTCCATAATTCCATTATCTTTCACTCTCCAAGTCACCATCTCCATGGAACCTCCAAATCCTCCTCCACCCACCACTCACATAGTAGCCGTACCATACCCAGGTCGAGGCCACATCAACCCAATGATGAACCTATGCAAACTCTTAATCTCCAACAACCCCAACATCCTTGTTACCTTTGTTGTCACGGAAGAATGGCTCACCATCATCAACTCCGACCCACCAAAACCAAACAACAACATCAAATTCGCCACCATCCCAAACGTTATTCCCTCCGAAGAAGGTCGAGGCAAAGATTTTCTTAATTTTCTTGAAGCTGTTATGACTAAAATGGAAGACCCATTTAAGAAACTACTTGATTCGTTTGAGAGAGTGCCGAGTGTGATTATACATGATAGCTATTTGTTTTGGGTTATAAGAGTTGCCAATAAGAGGAATGTTCCTGTTGCGTCGTTTTGGCCTATGTCGGCGTCGTTTTTTCTTGTTCTTAAACATTATCGTCGTTTGGAGGAAAACGGTGATTACCCAGTAAATGCTTCAGAAGTTGGTGACAAACGTGTGGATTACATTCCGGGGAACTCATCAATTCGTCTCCAAGATTTTCCACTTCATGATGCGAGCTTACGCACCCGTAGATTGTTAGAATTAGCTCTCAATACCATACCATGGATGAAGAAAGCACAATATCTATTATTCCCTTCCATATATGAAATTGAGCCTCAAGCAATTGATGTTTTGAGAGAAGAATTTTCTATACCAATTTACACAATTGGACCTACCATACCTTATTTTAGTCACGGCCAAATTGCCTCTCTAAGCACCAGCCAAGATGTTGAACTTGATTATATAAATTGGCTAGATAATCAACCCATTGGTTCTGTTCTATATGTCTCACAAGGGAGTTTTCTTTCGGTTTCAAGCGAACAAATCAATGAAATTGTGAATGGTTTGCGCGAAAGTGGTGTTAGATTCTTGTGGATAATGCGTGGAGAAAGTTCTAAGTGGAAAGATATTTGTGGGGAAAAAGGGTTTGTTTTGCCATGGTGTGACCAATTGAGAGTGTTGATGCATAGTGCTATAGGTGGTTTTTGGTCCCATTGTGGGTGGAATTCAACAAGAGAAGGTTTGTTTTGTGGTGTGCCTTTTCTTACCTCTCCAATAATGATGGACCAACCTTTGAATAGTAAGTATATAGTTGAGGATTGGAAGGTTGGGTGGAGAGTGGAGAAGGAGGTTAAAGATGATGTTTTGATAAGAAGAGATGAAATTGCTAGGCTTGTTAGAAGATTTATGGATTTGGAGGATGATGAAGTGAAGGAAATGAGGAAAAGAGCAAGAGATCTTCAACAAATATGCCAAAGTGCAGTTGCAAGTGGAGGGTCATCCGAAAATAATATGAAAGCCTTTCTTGGTAATATATTACATGGATTCAAACCATAG
Protein sequence

>Msa0854170

MLEGPLPAVQSLLKSIILFFSIHFISYTLHRNLYSIIPLSFTLQVTISMEPPNPPPPTTHIVAVPYPGRGHINPMMNLCKLLISNNPNILVTFVVTEEWLTIINSDPPKPNNNIKFATIPNVIPSEEGRGKDFLNFLEAVMTKMEDPFKKLLDSFERVPSVIIHDSYLFWVIRVANKRNVPVASFWPMSASFFLVLKHYRRLEENGDYPVNASEVGDKRVDYIPGNSSIRLQDFPLHDASLRTRRLLELALNTIPWMKKAQYLLFPSIYEIEPQAIDVLREEFSIPIYTIGPTIPYFSHGQIASLSTSQDVELDYINWLDNQPIGSVLYVSQGSFLSVSSEQINEIVNGLRESGVRFLWIMRGESSKWKDICGEKGFVLPWCDQLRVLMHSAIGGFWSHCGWNSTREGLFCGVPFLTSPIMMDQPLNSKYIVEDWKVGWRVEKEVKDDVLIRRDEIARLVRRFMDLEDDEVKEMRKRARDLQQICQSAVASGGSSENNMKAFLGNILHGFKP*