Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0855070 | XP_003616034.2 | 95.929 | 786 | 32 | 0 | 1 | 786 | 1 | 786 | 0.0 | 1531 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0855070 | sp|Q6Z3U3|Y7797_ORYSJ | 41.107 | 849 | 395 | 20 | 6 | 771 | 17 | 843 | 0.0 | 548 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0855070 | G7K0T7 | 95.929 | 786 | 32 | 0 | 1 | 786 | 1 | 786 | 0.0 | 1531 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0855070 | TF | B3 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0777480 | Msa0855070 | 0.806850 | 6.733822e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0855070 | MtrunA17_Chr5g0432721 | 95.929 | 786 | 32 | 0 | 1 | 786 | 1 | 786 | 0.0 | 1531 |
| Msa0855070 | MtrunA17_Chr3g0107701 | 56.190 | 840 | 298 | 14 | 1 | 778 | 1 | 832 | 0.0 | 855 |
| Msa0855070 | MtrunA17_Chr4g0012861 | 42.584 | 836 | 399 | 11 | 1 | 777 | 1 | 814 | 0.0 | 613 |
| Msa0855070 | MtrunA17_Chr2g0281191 | 41.241 | 548 | 222 | 12 | 283 | 774 | 314 | 817 | 3.28e-110 | 357 |
| Msa0855070 | MtrunA17_Chr2g0281191 | 45.455 | 121 | 49 | 4 | 6 | 119 | 31 | 141 | 1.32e-22 | 103 |
| Msa0855070 | MtrunA17_Chr7g0244871 | 58.065 | 93 | 39 | 0 | 314 | 406 | 5 | 97 | 2.38e-32 | 120 |
| Msa0855070 | MtrunA17_Chr7g0251891 | 48.235 | 85 | 43 | 1 | 321 | 404 | 16 | 100 | 2.02e-19 | 87.4 |
| Msa0855070 | MtrunA17_Chr7g0237841 | 39.216 | 102 | 60 | 2 | 321 | 420 | 623 | 724 | 1.47e-15 | 81.3 |
| Msa0855070 | MtrunA17_Chr1g0178071 | 37.037 | 135 | 64 | 6 | 302 | 422 | 54 | 181 | 4.88e-15 | 77.0 |
| Msa0855070 | MtrunA17_Chr5g0422501 | 41.818 | 110 | 47 | 4 | 321 | 417 | 235 | 340 | 5.60e-14 | 74.7 |
| Msa0855070 | MtrunA17_Chr7g0276471 | 38.462 | 91 | 51 | 3 | 321 | 408 | 117 | 205 | 1.74e-13 | 73.6 |
| Msa0855070 | MtrunA17_Chr7g0266821 | 41.176 | 102 | 50 | 5 | 326 | 421 | 65 | 162 | 4.76e-13 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0855070 | AT4G32010.2 | 41.153 | 746 | 314 | 15 | 3 | 706 | 4 | 666 | 8.86e-175 | 522 |
| Msa0855070 | AT2G30470.1 | 40.564 | 816 | 360 | 19 | 1 | 774 | 6 | 738 | 5.25e-173 | 518 |
| Msa0855070 | AT4G32010.1 | 40.933 | 750 | 314 | 16 | 3 | 706 | 4 | 670 | 7.09e-173 | 517 |
| Msa0855070 | AT4G21550.2 | 33.333 | 453 | 260 | 10 | 3 | 437 | 14 | 442 | 4.78e-69 | 237 |
| Msa0855070 | AT4G21550.3 | 33.481 | 451 | 258 | 10 | 5 | 437 | 16 | 442 | 4.04e-68 | 235 |
| Msa0855070 | AT4G21550.1 | 33.333 | 453 | 260 | 10 | 3 | 437 | 14 | 442 | 4.99e-68 | 239 |
| Msa0855070 | AT4G21550.1 | 40.336 | 119 | 56 | 4 | 657 | 774 | 551 | 655 | 2.64e-12 | 70.9 |
| Msa0855070 | AT3G26790.1 | 45.882 | 85 | 45 | 1 | 321 | 404 | 91 | 175 | 5.98e-18 | 86.3 |
| Msa0855070 | AT3G24650.1 | 41.176 | 102 | 58 | 2 | 321 | 420 | 571 | 672 | 6.67e-16 | 82.4 |
| Msa0855070 | AT1G28300.1 | 41.414 | 99 | 56 | 2 | 321 | 418 | 170 | 267 | 1.69e-15 | 79.3 |
| Msa0855070 | AT5G06250.5 | 35.135 | 148 | 73 | 6 | 310 | 439 | 37 | 179 | 2.41e-15 | 77.4 |
| Msa0855070 | AT5G06250.4 | 35.135 | 148 | 73 | 6 | 310 | 439 | 37 | 179 | 2.53e-15 | 77.8 |
| Msa0855070 | AT4G01500.1 | 43.820 | 89 | 47 | 2 | 321 | 408 | 35 | 121 | 3.00e-15 | 78.2 |
| Msa0855070 | AT5G06250.2 | 35.135 | 148 | 73 | 6 | 310 | 439 | 37 | 179 | 3.16e-15 | 77.4 |
| Msa0855070 | AT5G06250.3 | 35.135 | 148 | 73 | 6 | 310 | 439 | 37 | 179 | 3.23e-15 | 77.0 |
| Msa0855070 | AT2G36080.4 | 39.815 | 108 | 56 | 4 | 321 | 421 | 37 | 142 | 3.36e-15 | 74.7 |
| Msa0855070 | AT2G36080.2 | 39.815 | 108 | 56 | 4 | 321 | 421 | 37 | 142 | 3.36e-15 | 74.7 |
| Msa0855070 | AT5G06250.1 | 35.135 | 148 | 73 | 6 | 310 | 439 | 37 | 179 | 4.59e-15 | 76.6 |
| Msa0855070 | AT2G36080.1 | 39.815 | 108 | 56 | 4 | 321 | 421 | 37 | 142 | 6.56e-15 | 75.9 |
| Msa0855070 | AT2G36080.3 | 39.815 | 108 | 56 | 4 | 321 | 421 | 37 | 142 | 6.64e-15 | 75.5 |
| Msa0855070 | AT2G46870.1 | 40.659 | 91 | 49 | 3 | 321 | 408 | 34 | 122 | 7.94e-15 | 76.6 |
| Msa0855070 | AT1G13260.1 | 42.391 | 92 | 47 | 3 | 321 | 408 | 187 | 276 | 8.85e-15 | 77.0 |
| Msa0855070 | AT3G25730.1 | 38.318 | 107 | 57 | 4 | 321 | 420 | 182 | 286 | 2.90e-14 | 75.5 |
| Msa0855070 | AT3G61970.1 | 38.298 | 94 | 50 | 3 | 321 | 408 | 22 | 113 | 7.93e-14 | 73.6 |
| Msa0855070 | AT1G68840.2 | 41.935 | 93 | 47 | 3 | 321 | 408 | 187 | 277 | 2.13e-13 | 72.8 |
| Msa0855070 | AT1G68840.1 | 41.935 | 93 | 47 | 3 | 321 | 408 | 187 | 277 | 2.13e-13 | 72.8 |
| Msa0855070 | AT1G01030.2 | 40.860 | 93 | 46 | 4 | 321 | 408 | 55 | 143 | 5.02e-13 | 71.6 |
| Msa0855070 | AT1G01030.1 | 40.860 | 93 | 46 | 4 | 321 | 408 | 55 | 143 | 5.71e-13 | 71.6 |
| Msa0855070 | AT3G11580.1 | 36.752 | 117 | 55 | 5 | 321 | 421 | 28 | 141 | 6.45e-13 | 70.1 |
| Msa0855070 | AT3G11580.4 | 36.752 | 117 | 55 | 5 | 321 | 421 | 28 | 141 | 5.24e-12 | 67.0 |
| Msa0855070 | AT3G11580.2 | 36.752 | 117 | 55 | 5 | 321 | 421 | 28 | 141 | 5.24e-12 | 67.0 |
| Msa0855070 | AT3G11580.5 | 36.752 | 117 | 55 | 5 | 321 | 421 | 28 | 141 | 5.24e-12 | 67.0 |
| Msa0855070 | AT3G11580.3 | 36.752 | 117 | 55 | 5 | 321 | 421 | 28 | 141 | 1.14e-11 | 67.8 |
Find 210 sgRNAs with CRISPR-Local
Find 399 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTCAATTGTTACAATATT+TGG | 0.086549 | 5_4:+48128957 | None:intergenic |
| ATTCAAGAACACAAGCTTTC+AGG | 0.213336 | 5_4:-48128026 | Msa0855070:CDS |
| CACTTAACTTCTTCGGTCTT+TGG | 0.232028 | 5_4:+48130800 | None:intergenic |
| ACTTAACACCTTCTCAAATA+AGG | 0.237548 | 5_4:+48129960 | None:intergenic |
| CCCGCATTTGTTGCAGAGTT+TGG | 0.256841 | 5_4:+48132517 | None:intergenic |
| TATGATTAATTTGATTGTTT+TGG | 0.258238 | 5_4:+48127745 | None:intergenic |
| CAACTGCTTCAGATTCTAAT+TGG | 0.263143 | 5_4:+48127772 | None:intergenic |
| TTCTAACGGCATTTCGATAA+AGG | 0.267420 | 5_4:-48129318 | Msa0855070:CDS |
| ATCAGTTACTTTCTCGATAC+TGG | 0.269074 | 5_4:-48130421 | Msa0855070:CDS |
| TTTACAGTTCCAAGATATAA+TGG | 0.271409 | 5_4:-48129734 | Msa0855070:CDS |
| TATACCTCAGCACACGCTTT+TGG | 0.274011 | 5_4:+48129901 | None:intergenic |
| TGAAGACTTTCTTGTTCCTT+TGG | 0.285526 | 5_4:+48128436 | None:intergenic |
| AAGAAGAGGTCTCGCAATAT+TGG | 0.296576 | 5_4:-48129083 | Msa0855070:CDS |
| TACATCCTACTGTTGTTATT+AGG | 0.308177 | 5_4:+48129679 | None:intergenic |
| AACGGGGAACCTTACTTAAA+TGG | 0.309832 | 5_4:-48129218 | Msa0855070:CDS |
| ACGGATGAGGGAAGCCTAAA+TGG | 0.318513 | 5_4:-48127669 | Msa0855070:CDS |
| GTTAAGGAGAAATATAAAAT+TGG | 0.325578 | 5_4:+48127398 | None:intergenic |
| CAATTAAATGCTGGTGATAC+TGG | 0.325898 | 5_4:-48129619 | Msa0855070:intron |
| AATGTAGTAAATGCTGTTAA+AGG | 0.330641 | 5_4:+48130725 | None:intergenic |
| TTAATATGCTAGTCATGCTT+TGG | 0.338936 | 5_4:+48127549 | None:intergenic |
| CATCATATTCTTCAAATACT+TGG | 0.347609 | 5_4:+48128934 | None:intergenic |
| CTAACTAAACTGTGCAGTTA+AGG | 0.347618 | 5_4:+48127382 | None:intergenic |
| TTAATCTTGAATCTTGAATC+TGG | 0.351367 | 5_4:-48132803 | Msa0855070:five_prime_UTR |
| TTACAGTTCCAAGATATAAT+GGG | 0.352438 | 5_4:-48129733 | Msa0855070:CDS |
| CCTCAGAATTTGAACTCATT+AGG | 0.359994 | 5_4:-48129275 | Msa0855070:CDS |
| AGGATACTGAAAATCATAAT+AGG | 0.362554 | 5_4:-48131000 | Msa0855070:CDS |
| CCTCAAGCTGACCTCCATTT+AGG | 0.367489 | 5_4:+48127655 | None:intergenic |
| GCAAACATCTCAGTCTATAT+TGG | 0.370039 | 5_4:-48130543 | Msa0855070:CDS |
| AAATTCCACCGTCATGAAAC+TGG | 0.376289 | 5_4:-48131389 | Msa0855070:CDS |
| CTGGTGGAACAAGCTGTTAA+AGG | 0.377011 | 5_4:-48130914 | Msa0855070:CDS |
| GCCTAGTGCTGCGGGACAAT+TGG | 0.377079 | 5_4:-48127625 | Msa0855070:CDS |
| TTCAATCAATGAAAGGTAAC+GGG | 0.377988 | 5_4:-48129235 | Msa0855070:CDS |
| CTTGTTCCTTTGGACCGAGC+TGG | 0.382544 | 5_4:+48128446 | None:intergenic |
| TGAGGTGCACCAGAAAAGTT+TGG | 0.383323 | 5_4:+48129293 | None:intergenic |
| GATGGCATGGTTTCATGTAT+TGG | 0.390905 | 5_4:-48130824 | Msa0855070:CDS |
| AAAACCAGTGCCTCTCCATC+AGG | 0.394979 | 5_4:-48128792 | Msa0855070:CDS |
| ACATTCAGAACATCTGCGTT+TGG | 0.398523 | 5_4:-48129195 | Msa0855070:CDS |
| GAACATCTGCGTTTGGGTAA+TGG | 0.398608 | 5_4:-48129188 | Msa0855070:CDS |
| CAATTCTACACAACTGCATA+AGG | 0.399404 | 5_4:+48130888 | None:intergenic |
| CCGAGTGATGCAGGTCGAAT+TGG | 0.400991 | 5_4:-48129937 | Msa0855070:CDS |
| CATTCAGAACATCTGCGTTT+GGG | 0.404927 | 5_4:-48129194 | Msa0855070:CDS |
| AACAATGCAAGTGATCGATA+TGG | 0.408713 | 5_4:-48130959 | Msa0855070:CDS |
| ATGAGTCTTGAAACAAATAA+AGG | 0.410706 | 5_4:-48130494 | Msa0855070:CDS |
| AGTTTCCATTTCTTCATGAC+TGG | 0.412100 | 5_4:+48127587 | None:intergenic |
| TAACCCCTCCCAGCTTTGTC+TGG | 0.414478 | 5_4:-48131157 | Msa0855070:intron |
| TCATCCCAGTCATGAAGAAA+TGG | 0.415741 | 5_4:-48127592 | Msa0855070:CDS |
| AGAAGAGGTCTCGCAATATT+GGG | 0.416834 | 5_4:-48129082 | Msa0855070:CDS |
| CAATGGTCCATTGCAGCAAA+TGG | 0.418979 | 5_4:-48129120 | Msa0855070:CDS |
| CTGCCGTTGGCCACTGAGAT+TGG | 0.423759 | 5_4:-48130611 | Msa0855070:CDS |
| TCGTTCGAGTACCTTGATTT+CGG | 0.425356 | 5_4:-48131204 | Msa0855070:CDS |
| AGGCAAGGCAAGTGCATGTC+GGG | 0.425926 | 5_4:+48127847 | None:intergenic |
| ACTCGTTCCCCATTATATCT+TGG | 0.426035 | 5_4:+48129725 | None:intergenic |
| CTTAACACCTTCTCAAATAA+GGG | 0.428464 | 5_4:+48129961 | None:intergenic |
| GAATTGACACTTAACTTCTT+CGG | 0.430100 | 5_4:+48130793 | None:intergenic |
| TTCAAAAGGAATGGTAAAGA+TGG | 0.430406 | 5_4:-48127347 | Msa0855070:three_prime_UTR |
| TGGAAACTGATACATATAAC+AGG | 0.432852 | 5_4:-48127572 | Msa0855070:CDS |
| TCTGAATGTCCATTTAAGTA+AGG | 0.433067 | 5_4:+48129209 | None:intergenic |
| CTTATGCAGTTGTGTAGAAT+TGG | 0.437808 | 5_4:-48130887 | Msa0855070:CDS |
| GAGGCAGAATTGAAGAGATT+AGG | 0.439797 | 5_4:-48127431 | Msa0855070:three_prime_UTR |
| TATTGCAAGGAAGGTTCAAC+TGG | 0.440184 | 5_4:-48132581 | Msa0855070:CDS |
| CAACAGTAGGATGTATGTAT+TGG | 0.441536 | 5_4:-48129671 | Msa0855070:CDS |
| GGGTGGTCTTTGATCTCTGG+TGG | 0.449691 | 5_4:-48132545 | Msa0855070:CDS |
| ACATTTAGTCGGATAGATCC+TGG | 0.451349 | 5_4:-48129517 | Msa0855070:CDS |
| CCAGCTGACGACGACTCGTC+AGG | 0.453820 | 5_4:+48127954 | None:intergenic |
| CAAGAGCTGGAGAAATTGTC+GGG | 0.454716 | 5_4:-48130383 | Msa0855070:CDS |
| TTGACTTTGGATTGGGAGAG+AGG | 0.456518 | 5_4:-48132658 | Msa0855070:five_prime_UTR |
| AAAGGGTGGTCTTTGATCTC+TGG | 0.456650 | 5_4:-48132548 | Msa0855070:CDS |
| ACAGAAAAGTGAATTCTCAT+AGG | 0.458212 | 5_4:+48131415 | None:intergenic |
| CTGCATTGGCAAGAGCATCT+AGG | 0.465149 | 5_4:+48128003 | None:intergenic |
| CTCTTTGAGCTTGCGACCAA+CGG | 0.474847 | 5_4:+48130846 | None:intergenic |
| ACAATATTTGGCTTGACGCT+AGG | 0.475518 | 5_4:+48128969 | None:intergenic |
| CCTGACGAGTCGTCGTCAGC+TGG | 0.478183 | 5_4:-48127954 | Msa0855070:CDS |
| AAGAAATTCTGTTCTGCCGT+TGG | 0.479555 | 5_4:-48130624 | Msa0855070:CDS |
| CCAAACTCTGCAACAAATGC+GGG | 0.482509 | 5_4:-48132517 | Msa0855070:intron |
| CATTCAACCACCAAGTGGAC+AGG | 0.483217 | 5_4:-48127880 | Msa0855070:CDS |
| TGGGTAATGGAACTGCTGAT+TGG | 0.484375 | 5_4:-48129175 | Msa0855070:CDS |
| TAGCATATTAAAACAACTGC+AGG | 0.484435 | 5_4:-48127537 | Msa0855070:three_prime_UTR |
| TTTATTTGTTTCAAGACTCA+TGG | 0.486601 | 5_4:+48130496 | None:intergenic |
| CTATGGAATTGAGACTTACA+TGG | 0.489129 | 5_4:-48129022 | Msa0855070:CDS |
| TTTAACAGCATTTACTACAT+TGG | 0.491046 | 5_4:-48130723 | Msa0855070:CDS |
| GCATCGTAAGGCTCTTGAAC+CGG | 0.491358 | 5_4:+48127808 | None:intergenic |
| GCCAAATATTGTAACAATTG+AGG | 0.493508 | 5_4:-48128958 | Msa0855070:CDS |
| ACTGAAACCATTTGCTGCAA+TGG | 0.494767 | 5_4:+48129113 | None:intergenic |
| ATGAATAATTATTGCAAGGA+AGG | 0.495303 | 5_4:-48132590 | Msa0855070:CDS |
| CCTTCACATCAGCAGGTGGC+CGG | 0.497637 | 5_4:+48130450 | None:intergenic |
| CATTCATAGCGAAGATGCTA+TGG | 0.498765 | 5_4:-48129039 | Msa0855070:CDS |
| ATTGCCTAAAACTGCTGCAT+TGG | 0.500146 | 5_4:+48127989 | None:intergenic |
| AACTTATACCACCGAAATCA+AGG | 0.500512 | 5_4:+48131193 | None:intergenic |
| CCGGCCACCTGCTGATGTGA+AGG | 0.500794 | 5_4:-48130450 | Msa0855070:CDS |
| GTGTTAAGTCCGAGTGATGC+AGG | 0.501935 | 5_4:-48129946 | Msa0855070:CDS |
| TCAGCAGGTGGCCGGCGTGG+TGG | 0.502029 | 5_4:+48130458 | None:intergenic |
| GTTTCCATTTCTTCATGACT+GGG | 0.503416 | 5_4:+48127588 | None:intergenic |
| GGTGGTCTTTGATCTCTGGT+GGG | 0.503585 | 5_4:-48132544 | Msa0855070:CDS |
| TCAAGAGCTGGAGAAATTGT+CGG | 0.505861 | 5_4:-48130384 | Msa0855070:CDS |
| CAGTAGGATGTATGTATTGG+AGG | 0.506980 | 5_4:-48129668 | Msa0855070:CDS |
| TGACTTTGGATTGGGAGAGA+GGG | 0.509326 | 5_4:-48132657 | Msa0855070:five_prime_UTR |
| TTACCCTGATGGAGAGGCAC+TGG | 0.511162 | 5_4:+48128788 | None:intergenic |
| ATTATATCTTGGAACTGTAA+AGG | 0.513021 | 5_4:+48129736 | None:intergenic |
| TCAACTGGTGAATGGAAGAA+AGG | 0.514062 | 5_4:-48132566 | Msa0855070:CDS |
| CGGCCACCTGCTGATGTGAA+GGG | 0.515875 | 5_4:-48130449 | Msa0855070:CDS |
| TTAACCTTACCAGACAAAGC+TGG | 0.516700 | 5_4:+48131148 | None:intergenic |
| CTTCAATCAATGAAAGGTAA+CGG | 0.516842 | 5_4:-48129236 | Msa0855070:CDS |
| ATTGGAGAAGGTAAACTTGA+GGG | 0.521191 | 5_4:-48130593 | Msa0855070:CDS |
| AGCTCTTGATCAGTAATCCT+TGG | 0.521679 | 5_4:+48130398 | None:intergenic |
| AGGAAGGTTCAACTGGTGAA+TGG | 0.522237 | 5_4:-48132574 | Msa0855070:CDS |
| GGTATATAATCTTACCCTGA+TGG | 0.522702 | 5_4:+48128777 | None:intergenic |
| AAACATCCGAGGCATCGTCC+TGG | 0.526966 | 5_4:-48127921 | Msa0855070:CDS |
| CGATATGGTGAACATATTGA+TGG | 0.528805 | 5_4:-48130944 | Msa0855070:CDS |
| TACAAGTCACTCAACGGATG+AGG | 0.528930 | 5_4:-48127682 | Msa0855070:CDS |
| TTGTTACAGTAACATTTAGT+CGG | 0.530093 | 5_4:-48129528 | Msa0855070:intron |
| TGAAACGCTTTCACTAAAGA+TGG | 0.532158 | 5_4:-48130663 | Msa0855070:CDS |
| CCAATTCGACCTGCATCACT+CGG | 0.532323 | 5_4:+48129937 | None:intergenic |
| AATCTTCTTCAATCAATGAA+AGG | 0.533019 | 5_4:-48129242 | Msa0855070:CDS |
| TTTCAGTTTCAGAGAAGAAG+AGG | 0.534891 | 5_4:-48129097 | Msa0855070:CDS |
| TTGGCTCAACTATCAAAGAC+TGG | 0.539999 | 5_4:-48130524 | Msa0855070:CDS |
| TGATTTCAACACTAACATTG+AGG | 0.542603 | 5_4:-48132706 | Msa0855070:five_prime_UTR |
| ATCACCAGCATTTAATTGCA+AGG | 0.546441 | 5_4:+48129624 | None:intergenic |
| ATTAATCATATAGATGAAGC+AGG | 0.546533 | 5_4:-48127732 | Msa0855070:CDS |
| CAGTCCTTGCAATTAAATGC+TGG | 0.547662 | 5_4:-48129628 | Msa0855070:CDS |
| TAACCTTACCAGACAAAGCT+GGG | 0.549034 | 5_4:+48131149 | None:intergenic |
| GTGCATCCAGGACGATGCCT+CGG | 0.549949 | 5_4:+48127915 | None:intergenic |
| TACTTTCTCGATACTGGCCA+AGG | 0.550936 | 5_4:-48130415 | Msa0855070:CDS |
| GTTGTTGAGCCTAGTGCTGC+GGG | 0.553930 | 5_4:-48127633 | Msa0855070:CDS |
| CCGGCGCTTAAGAGTCTCAC+AGG | 0.559293 | 5_4:+48127827 | None:intergenic |
| CTTACCAGACAAAGCTGGGA+GGG | 0.559652 | 5_4:+48131153 | None:intergenic |
| CAACTGGTGAATGGAAGAAA+GGG | 0.559758 | 5_4:-48132565 | Msa0855070:CDS |
| TGTAGTGCCCTTATTTGAGA+AGG | 0.560033 | 5_4:-48129968 | Msa0855070:CDS |
| ATTGACTTCTGTTGTTACAC+AGG | 0.561453 | 5_4:-48129464 | Msa0855070:intron |
| TCCAATTGTCCCGCAGCACT+AGG | 0.562994 | 5_4:+48127624 | None:intergenic |
| TCCATCCAGTTTCATGACGG+TGG | 0.564496 | 5_4:+48131384 | None:intergenic |
| TTTGGCTTGACGCTAGGCGG+CGG | 0.564605 | 5_4:+48128975 | None:intergenic |
| AATTGCAAGGACTGTATGCA+AGG | 0.565036 | 5_4:+48129637 | None:intergenic |
| ACTATACATCCACTGTGGAT+AGG | 0.566036 | 5_4:+48131237 | None:intergenic |
| GGAAAATAATAGACCAACAT+GGG | 0.566824 | 5_4:-48130702 | Msa0855070:CDS |
| TTATTTCATTTAGGAACCCC+CGG | 0.568626 | 5_4:-48128829 | Msa0855070:intron |
| AAGGATTACTGATCAAGAGC+TGG | 0.569540 | 5_4:-48130396 | Msa0855070:CDS |
| GCCAAACTCTGCAACAAATG+CGG | 0.571705 | 5_4:-48132518 | Msa0855070:CDS |
| TTACCAGACAAAGCTGGGAG+GGG | 0.575319 | 5_4:+48131154 | None:intergenic |
| ATCAGACCAGCTCGGTCCAA+AGG | 0.576061 | 5_4:-48128452 | Msa0855070:CDS |
| TCCTCCATCCAGTTTCATGA+CGG | 0.576172 | 5_4:+48131381 | None:intergenic |
| CACACGATACAAGTGCATCC+AGG | 0.576195 | 5_4:+48127903 | None:intergenic |
| TTTGGCCTAATAACAACAGT+AGG | 0.577022 | 5_4:-48129684 | Msa0855070:CDS |
| TTCCCCTTCACATCAGCAGG+TGG | 0.578031 | 5_4:+48130446 | None:intergenic |
| TTCGAGTACCTTGATTTCGG+TGG | 0.580235 | 5_4:-48131201 | Msa0855070:CDS |
| TAAGTGTCAATTCAACAAAG+AGG | 0.581056 | 5_4:-48130783 | Msa0855070:CDS |
| ACATCAGCAGGTGGCCGGCG+TGG | 0.583280 | 5_4:+48130455 | None:intergenic |
| CCTGTGAGACTCTTAAGCGC+CGG | 0.585911 | 5_4:-48127827 | Msa0855070:CDS |
| CATTTAGTCGGATAGATCCT+GGG | 0.586278 | 5_4:-48129516 | Msa0855070:CDS |
| GCTTAAAACTGCACATAGTG+AGG | 0.592237 | 5_4:-48129153 | Msa0855070:CDS |
| CCTAATGAGTTCAAATTCTG+AGG | 0.592495 | 5_4:+48129275 | None:intergenic |
| CTTTCACTAAAGATGGCTCT+AGG | 0.593793 | 5_4:-48130656 | Msa0855070:CDS |
| GGTTGTTGAGCCTAGTGCTG+CGG | 0.595679 | 5_4:-48127634 | Msa0855070:CDS |
| ACAAGTCACTCAACGGATGA+GGG | 0.597566 | 5_4:-48127681 | Msa0855070:CDS |
| ATAGATGAAGCAGGTACTAG+TGG | 0.598221 | 5_4:-48127723 | Msa0855070:CDS |
| TATTGATGGTAGACTACTGG+TGG | 0.600333 | 5_4:-48130930 | Msa0855070:CDS |
| GGCCACCTGCTGATGTGAAG+GGG | 0.601780 | 5_4:-48130448 | Msa0855070:CDS |
| TGGTCGCAAGCTCAAAGAGA+TGG | 0.603653 | 5_4:-48130842 | Msa0855070:CDS |
| CAGGCAAGGCAAGTGCATGT+CGG | 0.603970 | 5_4:+48127846 | None:intergenic |
| ACATATTGATGGTAGACTAC+TGG | 0.604398 | 5_4:-48130933 | Msa0855070:CDS |
| TCCACCGTCATGAAACTGGA+TGG | 0.604497 | 5_4:-48131385 | Msa0855070:CDS |
| GTGTATGAATAATTATTGCA+AGG | 0.605180 | 5_4:-48132594 | Msa0855070:CDS |
| AGCATATTAAAACAACTGCA+GGG | 0.605642 | 5_4:-48127536 | Msa0855070:three_prime_UTR |
| ATTGCAAGGACTGTATGCAA+GGG | 0.607548 | 5_4:+48129638 | None:intergenic |
| ATATTGGGACGAAAACTAAG+AGG | 0.609627 | 5_4:-48129067 | Msa0855070:CDS |
| AAGATATAATGGGGAACGAG+TGG | 0.614024 | 5_4:-48129723 | Msa0855070:CDS |
| GCAAGCTCAAAGAGATGGCA+TGG | 0.614907 | 5_4:-48130837 | Msa0855070:CDS |
| AGTAGGATGTATGTATTGGA+GGG | 0.615364 | 5_4:-48129667 | Msa0855070:CDS |
| GCTTAAGAGTCTCACAGGCA+AGG | 0.617723 | 5_4:+48127832 | None:intergenic |
| CCTAAATGGAGGTCAGCTTG+AGG | 0.620594 | 5_4:-48127655 | Msa0855070:CDS |
| TTGTGTAGAATTGGTGAAGT+CGG | 0.620883 | 5_4:-48130878 | Msa0855070:CDS |
| TACAGTTCCAAGATATAATG+GGG | 0.621280 | 5_4:-48129732 | Msa0855070:CDS |
| TTGGCCACTGAGATTGGAGA+AGG | 0.621905 | 5_4:-48130605 | Msa0855070:CDS |
| AAACCAGTGCCTCTCCATCA+GGG | 0.622368 | 5_4:-48128791 | Msa0855070:intron |
| TCTACATCTTCTCATTCTAA+CGG | 0.622522 | 5_4:-48129332 | Msa0855070:CDS |
| ACAAGATACAAGTCACTCAA+CGG | 0.624174 | 5_4:-48127688 | Msa0855070:CDS |
| CAGCTGACGACGACTCGTCA+GGG | 0.628337 | 5_4:+48127955 | None:intergenic |
| TGATCTCTCATCCACCACGC+CGG | 0.630532 | 5_4:-48130469 | Msa0855070:CDS |
| ATAATCTTACCCTGATGGAG+AGG | 0.631070 | 5_4:+48128782 | None:intergenic |
| GATGAAGCAGGTACTAGTGG+TGG | 0.639251 | 5_4:-48127720 | Msa0855070:CDS |
| ATTCAACCACCAAGTGGACA+GGG | 0.641900 | 5_4:-48127879 | Msa0855070:CDS |
| GGTTCTGCATCAGACCAGCT+CGG | 0.642711 | 5_4:-48128460 | Msa0855070:CDS |
| TGGAAAATAATAGACCAACA+TGG | 0.644227 | 5_4:-48130703 | Msa0855070:CDS |
| GCATATTAAAACAACTGCAG+GGG | 0.644798 | 5_4:-48127535 | Msa0855070:three_prime_UTR |
| CTGGTGAATGGAAGAAAGGG+TGG | 0.646177 | 5_4:-48132562 | Msa0855070:CDS |
| AAGTCGGTGAATCAAGCCGT+TGG | 0.649140 | 5_4:-48130862 | Msa0855070:CDS |
| GAATTGAAGAGATTAGGTAG+TGG | 0.654585 | 5_4:-48127425 | Msa0855070:three_prime_UTR |
| GTGTGCATTCAACCACCAAG+TGG | 0.657426 | 5_4:-48127885 | Msa0855070:CDS |
| TCTCCAATCTCAGTGGCCAA+CGG | 0.657815 | 5_4:+48130608 | None:intergenic |
| CCTTCTGATTGCAAAATACG+AGG | 0.659510 | 5_4:+48129763 | None:intergenic |
| TTGCAAGGACTGTATGCAAG+GGG | 0.665717 | 5_4:+48129639 | None:intergenic |
| GTTAGAATGAGAAGATGTAG+AGG | 0.666828 | 5_4:+48129334 | None:intergenic |
| TAAAACTGCACATAGTGAGG+AGG | 0.667263 | 5_4:-48129150 | Msa0855070:CDS |
| GAAATGCAGCAATTGCAGCA+AGG | 0.667427 | 5_4:-48131360 | Msa0855070:intron |
| GATTGGAGAAGGTAAACTTG+AGG | 0.667659 | 5_4:-48130594 | Msa0855070:CDS |
| AAGAGCTGGAGAAATTGTCG+GGG | 0.668493 | 5_4:-48130382 | Msa0855070:CDS |
| TTAATCTTTCCGAAAACCGG+GGG | 0.672825 | 5_4:+48128813 | None:intergenic |
| ACCGTCATGAAACTGGATGG+AGG | 0.674066 | 5_4:-48131382 | Msa0855070:CDS |
| ATATTTGGCTTGACGCTAGG+CGG | 0.677044 | 5_4:+48128972 | None:intergenic |
| TTTAATCTTTCCGAAAACCG+GGG | 0.679300 | 5_4:+48128812 | None:intergenic |
| AGTGAGGAGGAAATGAACAA+TGG | 0.681817 | 5_4:-48129137 | Msa0855070:CDS |
| TATGGAATTGAGACTTACAT+GGG | 0.685466 | 5_4:-48129021 | Msa0855070:CDS |
| AAGCTGGGAGGGGTTAACAC+AGG | 0.694875 | 5_4:+48131164 | None:intergenic |
| GAATCACCACAAAACATCCG+AGG | 0.699635 | 5_4:-48127932 | Msa0855070:CDS |
| TTTACCTTCTCCAATCTCAG+TGG | 0.700030 | 5_4:+48130601 | None:intergenic |
| TCAATCAATGAAAGGTAACG+GGG | 0.707345 | 5_4:-48129234 | Msa0855070:CDS |
| GATGAGGGAAGCCTAAATGG+AGG | 0.710836 | 5_4:-48127666 | Msa0855070:CDS |
| CCTTACCAGACAAAGCTGGG+AGG | 0.719494 | 5_4:+48131152 | None:intergenic |
| AGAGCTGGAGAAATTGTCGG+GGG | 0.721199 | 5_4:-48130381 | Msa0855070:CDS |
| GCTCCCAAAAGCGTGTGCTG+AGG | 0.736724 | 5_4:-48129905 | Msa0855070:intron |
| TTGATACTATACATCCACTG+TGG | 0.738079 | 5_4:+48131232 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATATATTTCAATATCAA+AGG | + | chr5_4:48128872-48128891 | None:intergenic | 10.0% |
| !!! | GTTTTTTATTTATTTCATTT+AGG | - | chr5_4:48131309-48131328 | Msa0855070:intron | 10.0% |
| !! | CATGTATAAATAAAAAAAAA+CGG | + | chr5_4:48131765-48131784 | None:intergenic | 10.0% |
| !!! | TACATATATCTAAATATTTT+TGG | - | chr5_4:48131883-48131902 | Msa0855070:intron | 10.0% |
| !!! | ACATATATCTAAATATTTTT+GGG | - | chr5_4:48131884-48131903 | Msa0855070:intron | 10.0% |
| !!! | ATTTCACAATGTTATAATTT+TGG | - | chr5_4:48127714-48127733 | Msa0855070:CDS | 15.0% |
| !!! | TTTCACAATGTTATAATTTT+GGG | - | chr5_4:48127715-48127734 | Msa0855070:CDS | 15.0% |
| !!! | TTGATCCAAATTAATAATTT+TGG | - | chr5_4:48127761-48127780 | Msa0855070:CDS | 15.0% |
| !!! | TGATCCAAATTAATAATTTT+GGG | - | chr5_4:48127762-48127781 | Msa0855070:CDS | 15.0% |
| !! | AAATCCCAAAATTATTAATT+TGG | + | chr5_4:48127769-48127788 | None:intergenic | 15.0% |
| !! | TCTTAAATATAAGTAAAAGT+TGG | + | chr5_4:48128111-48128130 | None:intergenic | 15.0% |
| !!! | ACTTTTACTTATATTTAAGA+CGG | - | chr5_4:48128111-48128130 | Msa0855070:intron | 15.0% |
| !! | AGAATCAAATAACAAAATTT+CGG | + | chr5_4:48129059-48129078 | None:intergenic | 15.0% |
| !! | ATTATTCTTATTATGTACTA+TGG | - | chr5_4:48131649-48131668 | Msa0855070:intron | 15.0% |
| !!! | TATGATTAATTTGATTGTTT+TGG | + | chr5_4:48132405-48132424 | None:intergenic | 15.0% |
| !!! | TTTTACTTCATTTTTCATTT+TGG | - | chr5_4:48132694-48132713 | Msa0855070:five_prime_UTR | 15.0% |
| !!! | TTTTTTTTTTCTTGTTGTAG+TGG | - | chr5_4:48127386-48127405 | Msa0855070:three_prime_UTR | 20.0% |
| !!! | TTTTTTTTTCTTGTTGTAGT+GGG | - | chr5_4:48127387-48127406 | Msa0855070:three_prime_UTR | 20.0% |
| !!! | TTCACAATGTTATAATTTTG+GGG | - | chr5_4:48127716-48127735 | Msa0855070:CDS | 20.0% |
| !!! | ATTAATAATTTTGGGATTTG+AGG | - | chr5_4:48127770-48127789 | Msa0855070:CDS | 20.0% |
| !! | AATACAACTTTAAATATGAG+TGG | + | chr5_4:48127946-48127965 | None:intergenic | 20.0% |
| !! | AAATCAAAATATGAAATGCT+CGG | - | chr5_4:48127975-48127994 | Msa0855070:CDS | 20.0% |
| !!! | CTTTTACTTATATTTAAGAC+GGG | - | chr5_4:48128112-48128131 | Msa0855070:intron | 20.0% |
| !!! | CCAATTTTTTTTAGAAAACT+CGG | + | chr5_4:48128431-48128450 | None:intergenic | 20.0% |
| !! | TTCAAATCAAACATATGTTT+AGG | - | chr5_4:48128597-48128616 | Msa0855070:intron | 20.0% |
| !! | GAATCAAATAACAAAATTTC+GGG | + | chr5_4:48129058-48129077 | None:intergenic | 20.0% |
| !!! | TATCATTGAATGTTTTTCTA+TGG | - | chr5_4:48129120-48129139 | Msa0855070:CDS | 20.0% |
| !! | ATAATAGACCAAAATACTAA+GGG | + | chr5_4:48130085-48130104 | None:intergenic | 20.0% |
| !! | TATAATAGACCAAAATACTA+AGG | + | chr5_4:48130086-48130105 | None:intergenic | 20.0% |
| !! | AACTGAGATAATAATGTTAA+GGG | + | chr5_4:48130149-48130168 | None:intergenic | 20.0% |
| !! | AAACTGAGATAATAATGTTA+AGG | + | chr5_4:48130150-48130169 | None:intergenic | 20.0% |
| !!! | AATTTCTATTTGGTTTTAGA+AGG | - | chr5_4:48130658-48130677 | Msa0855070:CDS | 20.0% |
| !!! | AATGATATAGTTTGGATTTT+TGG | - | chr5_4:48131252-48131271 | Msa0855070:intron | 20.0% |
| !! | ATAAATAAAAAACATAAGCC+AGG | + | chr5_4:48131302-48131321 | None:intergenic | 20.0% |
| !! | TAATTAAGTACTAGTTATCA+AGG | + | chr5_4:48132023-48132042 | None:intergenic | 20.0% |
| !! | GTTAAGGAGAAATATAAAAT+TGG | + | chr5_4:48132752-48132771 | None:intergenic | 20.0% |
| ! | TTAATCTTGAATCTTGAATC+TGG | - | chr5_4:48127344-48127363 | Msa0855070:three_prime_UTR | 25.0% |
| !!! | TTTTTGGGTTTTGATTTCTA+GGG | - | chr5_4:48127464-48127483 | Msa0855070:three_prime_UTR | 25.0% |
| !!! | AGAGGGATTGATTTTATTTT+GGG | - | chr5_4:48127507-48127526 | Msa0855070:three_prime_UTR | 25.0% |
| !!! | TTATTTTGGGTTTTGTTCAA+TGG | - | chr5_4:48127520-48127539 | Msa0855070:three_prime_UTR | 25.0% |
| !!! | TATTTTGGGTTTTGTTCAAT+GGG | - | chr5_4:48127521-48127540 | Msa0855070:three_prime_UTR | 25.0% |
| ! | GTGTATGAATAATTATTGCA+AGG | - | chr5_4:48127553-48127572 | Msa0855070:exon | 25.0% |
| ! | ATGAATAATTATTGCAAGGA+AGG | - | chr5_4:48127557-48127576 | Msa0855070:CDS | 25.0% |
| !!! | CTTTTGCTTATATTTAAGAC+CGG | + | chr5_4:48128041-48128060 | None:intergenic | 25.0% |
| !!! | TCAAAGAAAGTTGATGTATT+TGG | + | chr5_4:48128088-48128107 | None:intergenic | 25.0% |
| ! | ACATTAAGATAATCATTTGC+AGG | + | chr5_4:48128213-48128232 | None:intergenic | 25.0% |
| !!! | CCGAGTTTTCTAAAAAAAAT+TGG | - | chr5_4:48128428-48128447 | Msa0855070:CDS | 25.0% |
| ! | GAATCTGTAAATTTATGTGT+CGG | + | chr5_4:48129096-48129115 | None:intergenic | 25.0% |
| ! | AGGATACTGAAAATCATAAT+AGG | - | chr5_4:48129147-48129166 | Msa0855070:CDS | 25.0% |
| ! | AATGTAGTAAATGCTGTTAA+AGG | + | chr5_4:48129425-48129444 | None:intergenic | 25.0% |
| ! | TTTAACAGCATTTACTACAT+TGG | - | chr5_4:48129424-48129443 | Msa0855070:intron | 25.0% |
| ! | TTTATTTGTTTCAAGACTCA+TGG | + | chr5_4:48129654-48129673 | None:intergenic | 25.0% |
| ! | ATGAGTCTTGAAACAAATAA+AGG | - | chr5_4:48129653-48129672 | Msa0855070:CDS | 25.0% |
| ! | CAAACAGAACCTAAATATAA+AGG | + | chr5_4:48129797-48129816 | None:intergenic | 25.0% |
| !! | CTTTATATTTAGGTTCTGTT+TGG | - | chr5_4:48129795-48129814 | Msa0855070:intron | 25.0% |
| ! | CAAATTGGTATATGAATTTC+AGG | - | chr5_4:48130353-48130372 | Msa0855070:intron | 25.0% |
| ! | ATTATATCTTGGAACTGTAA+AGG | + | chr5_4:48130414-48130433 | None:intergenic | 25.0% |
| ! | TTTACAGTTCCAAGATATAA+TGG | - | chr5_4:48130413-48130432 | Msa0855070:CDS | 25.0% |
| ! | TTACAGTTCCAAGATATAAT+GGG | - | chr5_4:48130414-48130433 | Msa0855070:CDS | 25.0% |
| ! | TTGTTACAGTAACATTTAGT+CGG | - | chr5_4:48130619-48130638 | Msa0855070:CDS | 25.0% |
| ! | TTAAAGGGTTATCTTTAAAC+AGG | - | chr5_4:48130787-48130806 | Msa0855070:CDS | 25.0% |
| ! | AATCTTCTTCAATCAATGAA+AGG | - | chr5_4:48130905-48130924 | Msa0855070:CDS | 25.0% |
| ! | TCCTCAATTGTTACAATATT+TGG | + | chr5_4:48131193-48131212 | None:intergenic | 25.0% |
| ! | CATCATATTCTTCAAATACT+TGG | + | chr5_4:48131216-48131235 | None:intergenic | 25.0% |
| ! | AAACTGTGAATGATATAGTT+TGG | - | chr5_4:48131244-48131263 | Msa0855070:intron | 25.0% |
| ! | CAATCATTGTACATATTTGA+AGG | + | chr5_4:48131446-48131465 | None:intergenic | 25.0% |
| ! | TTAGTCCTATTTCAAATGTT+TGG | - | chr5_4:48131561-48131580 | Msa0855070:intron | 25.0% |
| ! | TAGTCCTATTTCAAATGTTT+GGG | - | chr5_4:48131562-48131581 | Msa0855070:intron | 25.0% |
| !! | ATTATGTACTATGGTTTTTC+AGG | - | chr5_4:48131658-48131677 | Msa0855070:intron | 25.0% |
| ! | AAATAAAAAAAAACGGTAGC+AGG | + | chr5_4:48131758-48131777 | None:intergenic | 25.0% |
| ! | ATTAATCATATAGATGAAGC+AGG | - | chr5_4:48132415-48132434 | Msa0855070:intron | 25.0% |
| !!! | TACTTCATTTTTCATTTTGG+AGG | - | chr5_4:48132697-48132716 | Msa0855070:five_prime_UTR | 25.0% |
| !! | AGTTTACTTTCCTTTTCAAA+AGG | - | chr5_4:48132786-48132805 | Msa0855070:five_prime_UTR | 25.0% |
| TGATTTCAACACTAACATTG+AGG | - | chr5_4:48127441-48127460 | Msa0855070:three_prime_UTR | 30.0% | |
| ! | AACACTAACATTGAGGTTTT+TGG | - | chr5_4:48127448-48127467 | Msa0855070:three_prime_UTR | 30.0% |
| ! | ACACTAACATTGAGGTTTTT+GGG | - | chr5_4:48127449-48127468 | Msa0855070:three_prime_UTR | 30.0% |
| !!! | GTTTTTGGGTTTTGATTTCT+AGG | - | chr5_4:48127463-48127482 | Msa0855070:three_prime_UTR | 30.0% |
| !! | GAGAGGGATTGATTTTATTT+TGG | - | chr5_4:48127506-48127525 | Msa0855070:three_prime_UTR | 30.0% |
| !!! | ATTTTGGGTTTTGTTCAATG+GGG | - | chr5_4:48127522-48127541 | Msa0855070:three_prime_UTR | 30.0% |
| TGTTCTTATGAGTTCATGTT+GGG | - | chr5_4:48127803-48127822 | Msa0855070:CDS | 30.0% | |
| ! | TTTCAACCCTTTTTCTTTTC+TGG | - | chr5_4:48127844-48127863 | Msa0855070:CDS | 30.0% |
| ! | TTCAACCCTTTTTCTTTTCT+GGG | - | chr5_4:48127845-48127864 | Msa0855070:CDS | 30.0% |
| AAAACCCCAGAAAAGAAAAA+GGG | + | chr5_4:48127853-48127872 | None:intergenic | 30.0% | |
| ! | TGATCATCATTTTCATCCAA+AGG | + | chr5_4:48127921-48127940 | None:intergenic | 30.0% |
| AAATGTAGACTGAACAGAAA+GGG | + | chr5_4:48128164-48128183 | None:intergenic | 30.0% | |
| AAGTCCATGTTGCAATTTAT+AGG | - | chr5_4:48128552-48128571 | Msa0855070:intron | 30.0% | |
| AGTCCATGTTGCAATTTATA+GGG | - | chr5_4:48128553-48128572 | Msa0855070:intron | 30.0% | |
| TTACCCTATAAATTGCAACA+TGG | + | chr5_4:48128559-48128578 | None:intergenic | 30.0% | |
| AAATTAAGAATCCGTAAGCA+GGG | + | chr5_4:48128688-48128707 | None:intergenic | 30.0% | |
| TAAATTAAGAATCCGTAAGC+AGG | + | chr5_4:48128689-48128708 | None:intergenic | 30.0% | |
| ACAGAAAAGTGAATTCTCAT+AGG | + | chr5_4:48128735-48128754 | None:intergenic | 30.0% | |
| ! | GAATGTTTTTCTATGGATAC+AGG | - | chr5_4:48129127-48129146 | Msa0855070:CDS | 30.0% |
| GAATTGACACTTAACTTCTT+CGG | + | chr5_4:48129357-48129376 | None:intergenic | 30.0% | |
| TAAGTGTCAATTCAACAAAG+AGG | - | chr5_4:48129364-48129383 | Msa0855070:intron | 30.0% | |
| TGGAAAATAATAGACCAACA+TGG | - | chr5_4:48129444-48129463 | Msa0855070:intron | 30.0% | |
| GGAAAATAATAGACCAACAT+GGG | - | chr5_4:48129445-48129464 | Msa0855070:intron | 30.0% | |
| ! | CATCTTCTCATTTTCAACAA+GGG | - | chr5_4:48129582-48129601 | Msa0855070:intron | 30.0% |
| CTTATTTCGATAAGTTCTCT+AGG | + | chr5_4:48129954-48129973 | None:intergenic | 30.0% | |
| AATAAGCTGAAAACAACTCA+TGG | - | chr5_4:48129968-48129987 | Msa0855070:CDS | 30.0% | |
| AGTTTATCGAAACAGCTTAA+CGG | + | chr5_4:48129999-48130018 | None:intergenic | 30.0% | |
| GAATCAACTTTGCATGTTTA+AGG | + | chr5_4:48130115-48130134 | None:intergenic | 30.0% | |
| CTTAACACCTTCTCAAATAA+GGG | + | chr5_4:48130189-48130208 | None:intergenic | 30.0% | |
| ACTTAACACCTTCTCAAATA+AGG | + | chr5_4:48130190-48130209 | None:intergenic | 30.0% | |
| TACAGTTCCAAGATATAATG+GGG | - | chr5_4:48130415-48130434 | Msa0855070:CDS | 30.0% | |
| ! | TACATCCTACTGTTGTTATT+AGG | + | chr5_4:48130471-48130490 | None:intergenic | 30.0% |
| !!! | CCAAATAGAAATTTTTTCCC+AGG | + | chr5_4:48130651-48130670 | None:intergenic | 30.0% |
| CCTGGGAAAAAATTTCTATT+TGG | - | chr5_4:48130648-48130667 | Msa0855070:CDS | 30.0% | |
| TCTACATCTTCTCATTCTAA+CGG | - | chr5_4:48130815-48130834 | Msa0855070:CDS | 30.0% | |
| ! | ATAAAGGATCCAAACTTTTC+TGG | - | chr5_4:48130845-48130864 | Msa0855070:CDS | 30.0% |
| CTTCAATCAATGAAAGGTAA+CGG | - | chr5_4:48130911-48130930 | Msa0855070:CDS | 30.0% | |
| TTCAATCAATGAAAGGTAAC+GGG | - | chr5_4:48130912-48130931 | Msa0855070:CDS | 30.0% | |
| TCTGAATGTCCATTTAAGTA+AGG | + | chr5_4:48130941-48130960 | None:intergenic | 30.0% | |
| TATGGAATTGAGACTTACAT+GGG | - | chr5_4:48131126-48131145 | Msa0855070:intron | 30.0% | |
| GCCAAATATTGTAACAATTG+AGG | - | chr5_4:48131189-48131208 | Msa0855070:CDS | 30.0% | |
| ! | TTTTAATCTTTCCGAAAACC+GGG | + | chr5_4:48131339-48131358 | None:intergenic | 30.0% |
| !! | GTTTTAATCTTTCCGAAAAC+CGG | + | chr5_4:48131340-48131359 | None:intergenic | 30.0% |
| AGTCTTCAAAGAACCAAAAA+AGG | - | chr5_4:48131726-48131745 | Msa0855070:intron | 30.0% | |
| TCTGTAGTAGTCATGTTTAT+CGG | - | chr5_4:48131786-48131805 | Msa0855070:intron | 30.0% | |
| TAAAACATTTCACACATGCA+CGG | + | chr5_4:48131865-48131884 | None:intergenic | 30.0% | |
| !!! | CTAAATATTTTTGGGATGTG+TGG | - | chr5_4:48131892-48131911 | Msa0855070:intron | 30.0% |
| !! | AGTGCTTTGGAAATAACTTT+AGG | + | chr5_4:48131992-48132011 | None:intergenic | 30.0% |
| TGGAAACTGATACATATAAC+AGG | - | chr5_4:48132575-48132594 | Msa0855070:CDS | 30.0% | |
| TTAATATGCTAGTCATGCTT+TGG | + | chr5_4:48132601-48132620 | None:intergenic | 30.0% | |
| TAGCATATTAAAACAACTGC+AGG | - | chr5_4:48132610-48132629 | Msa0855070:CDS | 30.0% | |
| AGCATATTAAAACAACTGCA+GGG | - | chr5_4:48132611-48132630 | Msa0855070:CDS | 30.0% | |
| ! | ACTTTCCTTTTCAAAAGGAA+TGG | - | chr5_4:48132791-48132810 | Msa0855070:five_prime_UTR | 30.0% |
| !! | CTTTACCATTCCTTTTGAAA+AGG | + | chr5_4:48132799-48132818 | None:intergenic | 30.0% |
| TTCAAAAGGAATGGTAAAGA+TGG | - | chr5_4:48132800-48132819 | Msa0855070:five_prime_UTR | 30.0% | |
| !!! | GATTTCTAGGGTTTTGACTT+TGG | - | chr5_4:48127476-48127495 | Msa0855070:three_prime_UTR | 35.0% |
| !!! | TAGGGTTTTGACTTTGGATT+GGG | - | chr5_4:48127482-48127501 | Msa0855070:three_prime_UTR | 35.0% |
| !!! | TTTTGGGTTTTGTTCAATGG+GGG | - | chr5_4:48127523-48127542 | Msa0855070:three_prime_UTR | 35.0% |
| GTGTTCTTATGAGTTCATGT+TGG | - | chr5_4:48127802-48127821 | Msa0855070:CDS | 35.0% | |
| ! | TCAACCCTTTTTCTTTTCTG+GGG | - | chr5_4:48127846-48127865 | Msa0855070:CDS | 35.0% |
| GAAAACCCCAGAAAAGAAAA+AGG | + | chr5_4:48127854-48127873 | None:intergenic | 35.0% | |
| !!! | TTTTCTTTTCTGGGGTTTTC+AGG | - | chr5_4:48127854-48127873 | Msa0855070:CDS | 35.0% |
| !!! | TTTCTTTTCTGGGGTTTTCA+GGG | - | chr5_4:48127855-48127874 | Msa0855070:CDS | 35.0% |
| GGGTACATTACTTAAACTGA+TGG | + | chr5_4:48128144-48128163 | None:intergenic | 35.0% | |
| CAAATGTAGACTGAACAGAA+AGG | + | chr5_4:48128165-48128184 | None:intergenic | 35.0% | |
| TATCTTAATGTGTACCCACT+TGG | - | chr5_4:48128222-48128241 | Msa0855070:intron | 35.0% | |
| AGTCTTGCTCTGACTTTAAA+TGG | - | chr5_4:48128345-48128364 | Msa0855070:intron | 35.0% | |
| GTCTTGCTCTGACTTTAAAT+GGG | - | chr5_4:48128346-48128365 | Msa0855070:intron | 35.0% | |
| !!! | CTTGGTTTTGTTAGTAAGTC+AGG | - | chr5_4:48128517-48128536 | Msa0855070:intron | 35.0% |
| AATTAAGAATCCGTAAGCAG+GGG | + | chr5_4:48128687-48128706 | None:intergenic | 35.0% | |
| TATCAAAGGAGAGAAAGACA+AGG | + | chr5_4:48128858-48128877 | None:intergenic | 35.0% | |
| TTGATACTATACATCCACTG+TGG | + | chr5_4:48128918-48128937 | None:intergenic | 35.0% | |
| AACTTATACCACCGAAATCA+AGG | + | chr5_4:48128957-48128976 | None:intergenic | 35.0% | |
| ! | TTTATGTGTCGGTATCACAA+TGG | + | chr5_4:48129085-48129104 | None:intergenic | 35.0% |
| !!! | CATTGTTTTTGGTCGATTGA+GGG | + | chr5_4:48129175-48129194 | None:intergenic | 35.0% |
| ! | TCGATCACTTGCATTGTTTT+TGG | + | chr5_4:48129186-48129205 | None:intergenic | 35.0% |
| AACAATGCAAGTGATCGATA+TGG | - | chr5_4:48129188-48129207 | Msa0855070:CDS | 35.0% | |
| CGATATGGTGAACATATTGA+TGG | - | chr5_4:48129203-48129222 | Msa0855070:CDS | 35.0% | |
| ! | ACATATTGATGGTAGACTAC+TGG | - | chr5_4:48129214-48129233 | Msa0855070:CDS | 35.0% |
| CAATTCTACACAACTGCATA+AGG | + | chr5_4:48129262-48129281 | None:intergenic | 35.0% | |
| CTTATGCAGTTGTGTAGAAT+TGG | - | chr5_4:48129260-48129279 | Msa0855070:CDS | 35.0% | |
| TTGTGTAGAATTGGTGAAGT+CGG | - | chr5_4:48129269-48129288 | Msa0855070:CDS | 35.0% | |
| ! | ATACTTTTAGTCTCCCATGT+TGG | + | chr5_4:48129461-48129480 | None:intergenic | 35.0% |
| TGAAACGCTTTCACTAAAGA+TGG | - | chr5_4:48129484-48129503 | Msa0855070:CDS | 35.0% | |
| ATTGGAGAAGGTAAACTTGA+GGG | - | chr5_4:48129554-48129573 | Msa0855070:intron | 35.0% | |
| ! | GCATCTTCTCATTTTCAACA+AGG | - | chr5_4:48129581-48129600 | Msa0855070:intron | 35.0% |
| GCAAACATCTCAGTCTATAT+TGG | - | chr5_4:48129604-48129623 | Msa0855070:intron | 35.0% | |
| ! | ATCAGTTACTTTCTCGATAC+TGG | - | chr5_4:48129726-48129745 | Msa0855070:CDS | 35.0% |
| !! | GGGGAGTATCCTTTATATTT+AGG | - | chr5_4:48129785-48129804 | Msa0855070:intron | 35.0% |
| TACACATTTCCCTGTAATTG+CGG | - | chr5_4:48130321-48130340 | Msa0855070:intron | 35.0% | |
| ! | GGACTTTTCAGTTCAGATTT+TGG | - | chr5_4:48130445-48130464 | Msa0855070:CDS | 35.0% |
| TTTGGCCTAATAACAACAGT+AGG | - | chr5_4:48130463-48130482 | Msa0855070:CDS | 35.0% | |
| CAACAGTAGGATGTATGTAT+TGG | - | chr5_4:48130476-48130495 | Msa0855070:CDS | 35.0% | |
| AGTAGGATGTATGTATTGGA+GGG | - | chr5_4:48130480-48130499 | Msa0855070:CDS | 35.0% | |
| ATCACCAGCATTTAATTGCA+AGG | + | chr5_4:48130526-48130545 | None:intergenic | 35.0% | |
| CAATTAAATGCTGGTGATAC+TGG | - | chr5_4:48130528-48130547 | Msa0855070:CDS | 35.0% | |
| ! | ATTGACTTCTGTTGTTACAC+AGG | - | chr5_4:48130683-48130702 | Msa0855070:CDS | 35.0% |
| GTTAGAATGAGAAGATGTAG+AGG | + | chr5_4:48130816-48130835 | None:intergenic | 35.0% | |
| TTCTAACGGCATTTCGATAA+AGG | - | chr5_4:48130829-48130848 | Msa0855070:CDS | 35.0% | |
| CCTAATGAGTTCAAATTCTG+AGG | + | chr5_4:48130875-48130894 | None:intergenic | 35.0% | |
| CCTCAGAATTTGAACTCATT+AGG | - | chr5_4:48130872-48130891 | Msa0855070:CDS | 35.0% | |
| TCAATCAATGAAAGGTAACG+GGG | - | chr5_4:48130913-48130932 | Msa0855070:CDS | 35.0% | |
| TTTCAGTTTCAGAGAAGAAG+AGG | - | chr5_4:48131050-48131069 | Msa0855070:intron | 35.0% | |
| ATATTGGGACGAAAACTAAG+AGG | - | chr5_4:48131080-48131099 | Msa0855070:intron | 35.0% | |
| CTATGGAATTGAGACTTACA+TGG | - | chr5_4:48131125-48131144 | Msa0855070:intron | 35.0% | |
| ATCTTCAGATTTCTGTTACC+TGG | - | chr5_4:48131281-48131300 | Msa0855070:intron | 35.0% | |
| TTATTTCATTTAGGAACCCC+CGG | - | chr5_4:48131318-48131337 | Msa0855070:intron | 35.0% | |
| TTTAATCTTTCCGAAAACCG+GGG | + | chr5_4:48131338-48131357 | None:intergenic | 35.0% | |
| GGTATATAATCTTACCCTGA+TGG | + | chr5_4:48131373-48131392 | None:intergenic | 35.0% | |
| ! | GCATCCCAAACATTTGAAAT+AGG | + | chr5_4:48131569-48131588 | None:intergenic | 35.0% |
| TGAAGACTTTCTTGTTCCTT+TGG | + | chr5_4:48131714-48131733 | None:intergenic | 35.0% | |
| !!! | TATTTTTGGGATGTGTGGAT+TGG | - | chr5_4:48131897-48131916 | Msa0855070:intron | 35.0% |
| AGCAAGCACAGAATTTAACA+AGG | + | chr5_4:48131941-48131960 | None:intergenic | 35.0% | |
| !!! | TCGCTTCTTTTTAGAATCTG+CGG | + | chr5_4:48132077-48132096 | None:intergenic | 35.0% |
| ATTCAAGAACACAAGCTTTC+AGG | - | chr5_4:48132121-48132140 | Msa0855070:intron | 35.0% | |
| ! | TTTTCTTCTTACGCATCGTA+AGG | + | chr5_4:48132354-48132373 | None:intergenic | 35.0% |
| CAACTGCTTCAGATTCTAAT+TGG | + | chr5_4:48132378-48132397 | None:intergenic | 35.0% | |
| ACAAGATACAAGTCACTCAA+CGG | - | chr5_4:48132459-48132478 | Msa0855070:intron | 35.0% | |
| GTTTCCATTTCTTCATGACT+GGG | + | chr5_4:48132562-48132581 | None:intergenic | 35.0% | |
| AGTTTCCATTTCTTCATGAC+TGG | + | chr5_4:48132563-48132582 | None:intergenic | 35.0% | |
| GCATATTAAAACAACTGCAG+GGG | - | chr5_4:48132612-48132631 | Msa0855070:exon | 35.0% | |
| GAATTGAAGAGATTAGGTAG+TGG | - | chr5_4:48132722-48132741 | Msa0855070:five_prime_UTR | 35.0% | |
| CTAACTAAACTGTGCAGTTA+AGG | + | chr5_4:48132768-48132787 | None:intergenic | 35.0% | |
| !!! | CTAGGGTTTTGACTTTGGAT+TGG | - | chr5_4:48127481-48127500 | Msa0855070:three_prime_UTR | 40.0% |
| TATTGCAAGGAAGGTTCAAC+TGG | - | chr5_4:48127566-48127585 | Msa0855070:CDS | 40.0% | |
| TCAACTGGTGAATGGAAGAA+AGG | - | chr5_4:48127581-48127600 | Msa0855070:CDS | 40.0% | |
| CAACTGGTGAATGGAAGAAA+GGG | - | chr5_4:48127582-48127601 | Msa0855070:CDS | 40.0% | |
| ACGCATAAATGCACAGTTAC+AGG | + | chr5_4:48127885-48127904 | None:intergenic | 40.0% | |
| TGTCAACGAATCTCAGTTCT+TGG | + | chr5_4:48128008-48128027 | None:intergenic | 40.0% | |
| TTAATGTGTACCCACTTGGT+TGG | - | chr5_4:48128226-48128245 | Msa0855070:intron | 40.0% | |
| CTTACTTTGTGCTCCTCTAA+AGG | - | chr5_4:48128271-48128290 | Msa0855070:intron | 40.0% | |
| ! | ATTCCCTCTGATGCCAATTT+TGG | - | chr5_4:48128305-48128324 | Msa0855070:intron | 40.0% |
| AGTCAGAGCAAGACTTTGTA+TGG | + | chr5_4:48128340-48128359 | None:intergenic | 40.0% | |
| !! | CTTTACCTGCTTTTGTTCTG+AGG | - | chr5_4:48128491-48128510 | Msa0855070:intron | 40.0% |
| AGAAACCTCAGAACAAAAGC+AGG | + | chr5_4:48128499-48128518 | None:intergenic | 40.0% | |
| !!! | GCTTTTGTTCTGAGGTTTCT+TGG | - | chr5_4:48128499-48128518 | Msa0855070:intron | 40.0% |
| AAATTCCACCGTCATGAAAC+TGG | - | chr5_4:48128758-48128777 | Msa0855070:intron | 40.0% | |
| ACTATACATCCACTGTGGAT+AGG | + | chr5_4:48128913-48128932 | None:intergenic | 40.0% | |
| TCGTTCGAGTACCTTGATTT+CGG | - | chr5_4:48128943-48128962 | Msa0855070:CDS | 40.0% | |
| TAACCTTACCAGACAAAGCT+GGG | + | chr5_4:48129001-48129020 | None:intergenic | 40.0% | |
| TTAACCTTACCAGACAAAGC+TGG | + | chr5_4:48129002-48129021 | None:intergenic | 40.0% | |
| !!! | GCATTGTTTTTGGTCGATTG+AGG | + | chr5_4:48129176-48129195 | None:intergenic | 40.0% |
| ! | TATTGATGGTAGACTACTGG+TGG | - | chr5_4:48129217-48129236 | Msa0855070:CDS | 40.0% |
| GATGGCATGGTTTCATGTAT+TGG | - | chr5_4:48129323-48129342 | Msa0855070:CDS | 40.0% | |
| CACTTAACTTCTTCGGTCTT+TGG | + | chr5_4:48129350-48129369 | None:intergenic | 40.0% | |
| CTTTCACTAAAGATGGCTCT+AGG | - | chr5_4:48129491-48129510 | Msa0855070:CDS | 40.0% | |
| AAGAAATTCTGTTCTGCCGT+TGG | - | chr5_4:48129523-48129542 | Msa0855070:intron | 40.0% | |
| TTTACCTTCTCCAATCTCAG+TGG | + | chr5_4:48129549-48129568 | None:intergenic | 40.0% | |
| GATTGGAGAAGGTAAACTTG+AGG | - | chr5_4:48129553-48129572 | Msa0855070:intron | 40.0% | |
| TTGGCTCAACTATCAAAGAC+TGG | - | chr5_4:48129623-48129642 | Msa0855070:CDS | 40.0% | |
| AGCTCTTGATCAGTAATCCT+TGG | + | chr5_4:48129752-48129771 | None:intergenic | 40.0% | |
| AAGGATTACTGATCAAGAGC+TGG | - | chr5_4:48129751-48129770 | Msa0855070:CDS | 40.0% | |
| TCAAGAGCTGGAGAAATTGT+CGG | - | chr5_4:48129763-48129782 | Msa0855070:CDS | 40.0% | |
| ! | CAAAATACTAAGGGCTTGCT+AGG | + | chr5_4:48130076-48130095 | None:intergenic | 40.0% |
| ! | CTAGCAAGCCCTTAGTATTT+TGG | - | chr5_4:48130074-48130093 | Msa0855070:intron | 40.0% |
| ! | TGTAGTGCCCTTATTTGAGA+AGG | - | chr5_4:48130179-48130198 | Msa0855070:intron | 40.0% |
| TCATACATGCCGCAATTACA+GGG | + | chr5_4:48130333-48130352 | None:intergenic | 40.0% | |
| TTGCGGCATGTATGACAAAT+TGG | - | chr5_4:48130338-48130357 | Msa0855070:intron | 40.0% | |
| CCTTCTGATTGCAAAATACG+AGG | + | chr5_4:48130387-48130406 | None:intergenic | 40.0% | |
| ! | CCTCGTATTTTGCAATCAGA+AGG | - | chr5_4:48130384-48130403 | Msa0855070:CDS | 40.0% |
| ACTCGTTCCCCATTATATCT+TGG | + | chr5_4:48130425-48130444 | None:intergenic | 40.0% | |
| ! | AAGATATAATGGGGAACGAG+TGG | - | chr5_4:48130424-48130443 | Msa0855070:CDS | 40.0% |
| CAGTAGGATGTATGTATTGG+AGG | - | chr5_4:48130479-48130498 | Msa0855070:CDS | 40.0% | |
| ATTGCAAGGACTGTATGCAA+GGG | + | chr5_4:48130512-48130531 | None:intergenic | 40.0% | |
| AATTGCAAGGACTGTATGCA+AGG | + | chr5_4:48130513-48130532 | None:intergenic | 40.0% | |
| CAGTCCTTGCAATTAAATGC+TGG | - | chr5_4:48130519-48130538 | Msa0855070:CDS | 40.0% | |
| ACATTTAGTCGGATAGATCC+TGG | - | chr5_4:48130630-48130649 | Msa0855070:CDS | 40.0% | |
| CATTTAGTCGGATAGATCCT+GGG | - | chr5_4:48130631-48130650 | Msa0855070:CDS | 40.0% | |
| AACGGGGAACCTTACTTAAA+TGG | - | chr5_4:48130929-48130948 | Msa0855070:CDS | 40.0% | |
| ACATTCAGAACATCTGCGTT+TGG | - | chr5_4:48130952-48130971 | Msa0855070:CDS | 40.0% | |
| CATTCAGAACATCTGCGTTT+GGG | - | chr5_4:48130953-48130972 | Msa0855070:CDS | 40.0% | |
| GCTTAAAACTGCACATAGTG+AGG | - | chr5_4:48130994-48131013 | Msa0855070:CDS | 40.0% | |
| TAAAACTGCACATAGTGAGG+AGG | - | chr5_4:48130997-48131016 | Msa0855070:CDS | 40.0% | |
| AGTGAGGAGGAAATGAACAA+TGG | - | chr5_4:48131010-48131029 | Msa0855070:intron | 40.0% | |
| ! | ACTGAAACCATTTGCTGCAA+TGG | + | chr5_4:48131037-48131056 | None:intergenic | 40.0% |
| AAGAAGAGGTCTCGCAATAT+TGG | - | chr5_4:48131064-48131083 | Msa0855070:intron | 40.0% | |
| AGAAGAGGTCTCGCAATATT+GGG | - | chr5_4:48131065-48131084 | Msa0855070:intron | 40.0% | |
| CATTCATAGCGAAGATGCTA+TGG | - | chr5_4:48131108-48131127 | Msa0855070:intron | 40.0% | |
| !! | ACAATATTTGGCTTGACGCT+AGG | + | chr5_4:48131181-48131200 | None:intergenic | 40.0% |
| TTAATCTTTCCGAAAACCGG+GGG | + | chr5_4:48131337-48131356 | None:intergenic | 40.0% | |
| ATAATCTTACCCTGATGGAG+AGG | + | chr5_4:48131368-48131387 | None:intergenic | 40.0% | |
| ! | CTGATAGTGCTAAATGTGCA+AGG | + | chr5_4:48131394-48131413 | None:intergenic | 40.0% |
| GCAGACAGGTCAACATTATT+CGG | - | chr5_4:48131587-48131606 | Msa0855070:intron | 40.0% | |
| !!! | CTATGGTTTTTCAGGTCTTC+AGG | - | chr5_4:48131666-48131685 | Msa0855070:intron | 40.0% |
| !!! | TAGCAGGATCGTACCTTTTT+TGG | + | chr5_4:48131742-48131761 | None:intergenic | 40.0% |
| GTTTATCGGAACAGAGTTAG+AGG | - | chr5_4:48131800-48131819 | Msa0855070:intron | 40.0% | |
| ATTGCCTAAAACTGCTGCAT+TGG | + | chr5_4:48132161-48132180 | None:intergenic | 40.0% | |
| ATAGATGAAGCAGGTACTAG+TGG | - | chr5_4:48132424-48132443 | Msa0855070:intron | 40.0% | |
| TCATCCCAGTCATGAAGAAA+TGG | - | chr5_4:48132555-48132574 | Msa0855070:CDS | 40.0% | |
| GAGGCAGAATTGAAGAGATT+AGG | - | chr5_4:48132716-48132735 | Msa0855070:five_prime_UTR | 40.0% | |
| ! | TTGACTTTGGATTGGGAGAG+AGG | - | chr5_4:48127489-48127508 | Msa0855070:three_prime_UTR | 45.0% |
| ! | TGACTTTGGATTGGGAGAGA+GGG | - | chr5_4:48127490-48127509 | Msa0855070:three_prime_UTR | 45.0% |
| AGGAAGGTTCAACTGGTGAA+TGG | - | chr5_4:48127573-48127592 | Msa0855070:CDS | 45.0% | |
| AAAGGGTGGTCTTTGATCTC+TGG | - | chr5_4:48127599-48127618 | Msa0855070:CDS | 45.0% | |
| GCCAAACTCTGCAACAAATG+CGG | - | chr5_4:48127629-48127648 | Msa0855070:CDS | 45.0% | |
| CCAAACTCTGCAACAAATGC+GGG | - | chr5_4:48127630-48127649 | Msa0855070:CDS | 45.0% | |
| CGTGTTTGAATCTCAGCCTT+TGG | - | chr5_4:48127902-48127921 | Msa0855070:CDS | 45.0% | |
| ! | TTGTGCTCCTCTAAAGGTCT+CGG | - | chr5_4:48128277-48128296 | Msa0855070:intron | 45.0% |
| ATCAATCCCGAGACCTTTAG+AGG | + | chr5_4:48128287-48128306 | None:intergenic | 45.0% | |
| CCACCAAAATTGGCATCAGA+GGG | + | chr5_4:48128311-48128330 | None:intergenic | 45.0% | |
| !! | CCTCTGATGCCAATTTTGGT+GGG | - | chr5_4:48128309-48128328 | Msa0855070:intron | 45.0% |
| !! | ATGGACTAGCCCACCAAAAT+TGG | + | chr5_4:48128321-48128340 | None:intergenic | 45.0% |
| ! | ATTGGACCCCTAGGATTAGT+CGG | - | chr5_4:48128391-48128410 | Msa0855070:intron | 45.0% |
| CAATGACCGACTAATCCTAG+GGG | + | chr5_4:48128400-48128419 | None:intergenic | 45.0% | |
| CCAATGACCGACTAATCCTA+GGG | + | chr5_4:48128401-48128420 | None:intergenic | 45.0% | |
| !! | CCTAGGATTAGTCGGTCATT+GGG | - | chr5_4:48128399-48128418 | Msa0855070:intron | 45.0% |
| ! | CATTGACTATCCCCTGCTTA+CGG | - | chr5_4:48128674-48128693 | Msa0855070:intron | 45.0% |
| TCCTCCATCCAGTTTCATGA+CGG | + | chr5_4:48128769-48128788 | None:intergenic | 45.0% | |
| GAAATGCAGCAATTGCAGCA+AGG | - | chr5_4:48128787-48128806 | Msa0855070:intron | 45.0% | |
| ! | TTTTTGCAGCCTATCCACAG+TGG | - | chr5_4:48128901-48128920 | Msa0855070:intron | 45.0% |
| TTCGAGTACCTTGATTTCGG+TGG | - | chr5_4:48128946-48128965 | Msa0855070:CDS | 45.0% | |
| ! | ATGTGTCGGTATCACAATGG+CGG | + | chr5_4:48129082-48129101 | None:intergenic | 45.0% |
| CTGGTGGAACAAGCTGTTAA+AGG | - | chr5_4:48129233-48129252 | Msa0855070:CDS | 45.0% | |
| ! | TTTTTCCCCTTCACATCAGC+AGG | + | chr5_4:48129707-48129726 | None:intergenic | 45.0% |
| TACTTTCTCGATACTGGCCA+AGG | - | chr5_4:48129732-48129751 | Msa0855070:CDS | 45.0% | |
| CAAGAGCTGGAGAAATTGTC+GGG | - | chr5_4:48129764-48129783 | Msa0855070:CDS | 45.0% | |
| AAGAGCTGGAGAAATTGTCG+GGG | - | chr5_4:48129765-48129784 | Msa0855070:CDS | 45.0% | |
| ! | ATACCTCAGCACACGCTTTT+GGG | + | chr5_4:48130248-48130267 | None:intergenic | 45.0% |
| ! | TATACCTCAGCACACGCTTT+TGG | + | chr5_4:48130249-48130268 | None:intergenic | 45.0% |
| GTCATACATGCCGCAATTAC+AGG | + | chr5_4:48130334-48130353 | None:intergenic | 45.0% | |
| TTGCAAGGACTGTATGCAAG+GGG | + | chr5_4:48130511-48130530 | None:intergenic | 45.0% | |
| TGAGGTGCACCAGAAAAGTT+TGG | + | chr5_4:48130857-48130876 | None:intergenic | 45.0% | |
| GAACATCTGCGTTTGGGTAA+TGG | - | chr5_4:48130959-48130978 | Msa0855070:CDS | 45.0% | |
| !! | TGGGTAATGGAACTGCTGAT+TGG | - | chr5_4:48130972-48130991 | Msa0855070:CDS | 45.0% |
| CAATGGTCCATTGCAGCAAA+TGG | - | chr5_4:48131027-48131046 | Msa0855070:intron | 45.0% | |
| !! | ATATTTGGCTTGACGCTAGG+CGG | + | chr5_4:48131178-48131197 | None:intergenic | 45.0% |
| ! | ATTTAGGAACCCCCGGTTTT+CGG | - | chr5_4:48131325-48131344 | Msa0855070:intron | 45.0% |
| ! | CAAATGTTTGGGATGCAGAC+AGG | - | chr5_4:48131573-48131592 | Msa0855070:intron | 45.0% |
| CAAGGACTACTTCAGTGCTT+TGG | + | chr5_4:48132005-48132024 | None:intergenic | 45.0% | |
| ! | CTTGCCAATGCAGCAGTTTT+AGG | - | chr5_4:48132154-48132173 | Msa0855070:intron | 45.0% |
| GAATCACCACAAAACATCCG+AGG | - | chr5_4:48132215-48132234 | Msa0855070:intron | 45.0% | |
| ATTCAACCACCAAGTGGACA+GGG | - | chr5_4:48132268-48132287 | Msa0855070:intron | 45.0% | |
| ! | TCATGTTTTCCCTGTCCACT+TGG | + | chr5_4:48132280-48132299 | None:intergenic | 45.0% |
| TACAAGTCACTCAACGGATG+AGG | - | chr5_4:48132465-48132484 | Msa0855070:intron | 45.0% | |
| ACAAGTCACTCAACGGATGA+GGG | - | chr5_4:48132466-48132485 | Msa0855070:intron | 45.0% | |
| !!! | ATTTTTGAAAATATAATTAA+AGG | - | chr5_4:48130771-48130790 | Msa0855070:CDS | 5.0% |
| !!! | TTTTTGAAAATATAATTAAA+GGG | - | chr5_4:48130772-48130791 | Msa0855070:CDS | 5.0% |
| !! | AAATATCTTATAATATATAT+TGG | - | chr5_4:48131479-48131498 | Msa0855070:intron | 5.0% |
| !!! | TAATTAATTCTTATATTTTA+TGG | - | chr5_4:48132037-48132056 | Msa0855070:intron | 5.0% |
| CTGGTGAATGGAAGAAAGGG+TGG | - | chr5_4:48127585-48127604 | Msa0855070:CDS | 50.0% | |
| GGTGGTCTTTGATCTCTGGT+GGG | - | chr5_4:48127603-48127622 | Msa0855070:CDS | 50.0% | |
| ! | CCCGCATTTGTTGCAGAGTT+TGG | + | chr5_4:48127633-48127652 | None:intergenic | 50.0% |
| TCGTTGACAGCGTGATACTC+CGG | - | chr5_4:48128019-48128038 | Msa0855070:CDS | 50.0% | |
| ! | TGTGCTCCTCTAAAGGTCTC+GGG | - | chr5_4:48128278-48128297 | Msa0855070:intron | 50.0% |
| ! | CCCTCTGATGCCAATTTTGG+TGG | - | chr5_4:48128308-48128327 | Msa0855070:intron | 50.0% |
| CCCACCAAAATTGGCATCAG+AGG | + | chr5_4:48128312-48128331 | None:intergenic | 50.0% | |
| !! | CCCTAGGATTAGTCGGTCAT+TGG | - | chr5_4:48128398-48128417 | Msa0855070:intron | 50.0% |
| CCCAATGACCGACTAATCCT+AGG | + | chr5_4:48128402-48128421 | None:intergenic | 50.0% | |
| TCCACCGTCATGAAACTGGA+TGG | - | chr5_4:48128762-48128781 | Msa0855070:intron | 50.0% | |
| TCCATCCAGTTTCATGACGG+TGG | + | chr5_4:48128766-48128785 | None:intergenic | 50.0% | |
| ACCGTCATGAAACTGGATGG+AGG | - | chr5_4:48128765-48128784 | Msa0855070:intron | 50.0% | |
| TTACCAGACAAAGCTGGGAG+GGG | + | chr5_4:48128996-48129015 | None:intergenic | 50.0% | |
| CTTACCAGACAAAGCTGGGA+GGG | + | chr5_4:48128997-48129016 | None:intergenic | 50.0% | |
| AAGTCGGTGAATCAAGCCGT+TGG | - | chr5_4:48129285-48129304 | Msa0855070:CDS | 50.0% | |
| CTCTTTGAGCTTGCGACCAA+CGG | + | chr5_4:48129304-48129323 | None:intergenic | 50.0% | |
| TGGTCGCAAGCTCAAAGAGA+TGG | - | chr5_4:48129305-48129324 | Msa0855070:CDS | 50.0% | |
| GCAAGCTCAAAGAGATGGCA+TGG | - | chr5_4:48129310-48129329 | Msa0855070:CDS | 50.0% | |
| TCTCCAATCTCAGTGGCCAA+CGG | + | chr5_4:48129542-48129561 | None:intergenic | 50.0% | |
| TTGGCCACTGAGATTGGAGA+AGG | - | chr5_4:48129542-48129561 | Msa0855070:intron | 50.0% | |
| AGAGCTGGAGAAATTGTCGG+GGG | - | chr5_4:48129766-48129785 | Msa0855070:CDS | 50.0% | |
| GTGTTAAGTCCGAGTGATGC+AGG | - | chr5_4:48130201-48130220 | Msa0855070:intron | 50.0% | |
| CCAATTCGACCTGCATCACT+CGG | + | chr5_4:48130213-48130232 | None:intergenic | 50.0% | |
| AAAACCAGTGCCTCTCCATC+AGG | - | chr5_4:48131355-48131374 | Msa0855070:intron | 50.0% | |
| AAACCAGTGCCTCTCCATCA+GGG | - | chr5_4:48131356-48131375 | Msa0855070:intron | 50.0% | |
| !! | CTGCATTGGCAAGAGCATCT+AGG | + | chr5_4:48132147-48132166 | None:intergenic | 50.0% |
| ! | ACGATGCCTCGGATGTTTTG+TGG | + | chr5_4:48132224-48132243 | None:intergenic | 50.0% |
| CACACGATACAAGTGCATCC+AGG | + | chr5_4:48132247-48132266 | None:intergenic | 50.0% | |
| GTGTGCATTCAACCACCAAG+TGG | - | chr5_4:48132262-48132281 | Msa0855070:intron | 50.0% | |
| CATTCAACCACCAAGTGGAC+AGG | - | chr5_4:48132267-48132286 | Msa0855070:intron | 50.0% | |
| ! | TGTTTTCCCTGTCCACTTGG+TGG | + | chr5_4:48132277-48132296 | None:intergenic | 50.0% |
| GCATCGTAAGGCTCTTGAAC+CGG | + | chr5_4:48132342-48132361 | None:intergenic | 50.0% | |
| GATGAAGCAGGTACTAGTGG+TGG | - | chr5_4:48132427-48132446 | Msa0855070:intron | 50.0% | |
| ACGGATGAGGGAAGCCTAAA+TGG | - | chr5_4:48132478-48132497 | Msa0855070:intron | 50.0% | |
| GATGAGGGAAGCCTAAATGG+AGG | - | chr5_4:48132481-48132500 | Msa0855070:intron | 50.0% | |
| CCTCAAGCTGACCTCCATTT+AGG | + | chr5_4:48132495-48132514 | None:intergenic | 50.0% | |
| CCTAAATGGAGGTCAGCTTG+AGG | - | chr5_4:48132492-48132511 | Msa0855070:intron | 50.0% | |
| GGGTGGTCTTTGATCTCTGG+TGG | - | chr5_4:48127602-48127621 | Msa0855070:CDS | 55.0% | |
| !! | TACCCACTTGGTTGGCCTAG+CGG | - | chr5_4:48128234-48128253 | Msa0855070:intron | 55.0% |
| TTAAATGGGCCCCCCGCAAT+TGG | - | chr5_4:48128360-48128379 | Msa0855070:intron | 55.0% | |
| AATCCCACCGTCCAATTGCG+GGG | + | chr5_4:48128374-48128393 | None:intergenic | 55.0% | |
| CAATCCCACCGTCCAATTGC+GGG | + | chr5_4:48128375-48128394 | None:intergenic | 55.0% | |
| CCAATCCCACCGTCCAATTG+CGG | + | chr5_4:48128376-48128395 | None:intergenic | 55.0% | |
| AAGCTGGGAGGGGTTAACAC+AGG | + | chr5_4:48128986-48129005 | None:intergenic | 55.0% | |
| ! | TAACCCCTCCCAGCTTTGTC+TGG | - | chr5_4:48128990-48129009 | Msa0855070:CDS | 55.0% |
| CCTTACCAGACAAAGCTGGG+AGG | + | chr5_4:48128998-48129017 | None:intergenic | 55.0% | |
| ! | CCTCCCAGCTTTGTCTGGTA+AGG | - | chr5_4:48128995-48129014 | Msa0855070:CDS | 55.0% |
| TGATCTCTCATCCACCACGC+CGG | - | chr5_4:48129678-48129697 | Msa0855070:CDS | 55.0% | |
| TTCCCCTTCACATCAGCAGG+TGG | + | chr5_4:48129704-48129723 | None:intergenic | 55.0% | |
| CCGAGTGATGCAGGTCGAAT+TGG | - | chr5_4:48130210-48130229 | Msa0855070:intron | 55.0% | |
| ! | TTACCCTGATGGAGAGGCAC+TGG | + | chr5_4:48131362-48131381 | None:intergenic | 55.0% |
| GGTTCTGCATCAGACCAGCT+CGG | - | chr5_4:48131687-48131706 | Msa0855070:intron | 55.0% | |
| ATCAGACCAGCTCGGTCCAA+AGG | - | chr5_4:48131695-48131714 | Msa0855070:intron | 55.0% | |
| CTTGTTCCTTTGGACCGAGC+TGG | + | chr5_4:48131704-48131723 | None:intergenic | 55.0% | |
| !! | AAACATCCGAGGCATCGTCC+TGG | - | chr5_4:48132226-48132245 | Msa0855070:intron | 55.0% |
| AGGCAAGGCAAGTGCATGTC+GGG | + | chr5_4:48132303-48132322 | None:intergenic | 55.0% | |
| CAGGCAAGGCAAGTGCATGT+CGG | + | chr5_4:48132304-48132323 | None:intergenic | 55.0% | |
| GGTTGTTGAGCCTAGTGCTG+CGG | - | chr5_4:48132513-48132532 | Msa0855070:intron | 55.0% | |
| GTTGTTGAGCCTAGTGCTGC+GGG | - | chr5_4:48132514-48132533 | Msa0855070:intron | 55.0% | |
| TCCAATTGTCCCGCAGCACT+AGG | + | chr5_4:48132526-48132545 | None:intergenic | 55.0% | |
| CACCGCTAGGCCAACCAAGT+GGG | + | chr5_4:48128239-48128258 | None:intergenic | 60.0% | |
| ACACCGCTAGGCCAACCAAG+TGG | + | chr5_4:48128240-48128259 | None:intergenic | 60.0% | |
| !! | CTTGGTTGGCCTAGCGGTGT+TGG | - | chr5_4:48128240-48128259 | Msa0855070:intron | 60.0% |
| !! | TTGGCCTAGCGGTGTTGGCT+TGG | - | chr5_4:48128245-48128264 | Msa0855070:intron | 60.0% |
| !! | TGGCCTAGCGGTGTTGGCTT+GGG | - | chr5_4:48128246-48128265 | Msa0855070:intron | 60.0% |
| GATCCCAAGCCAACACCGCT+AGG | + | chr5_4:48128252-48128271 | None:intergenic | 60.0% | |
| ATCCCACCGTCCAATTGCGG+GGG | + | chr5_4:48128373-48128392 | None:intergenic | 60.0% | |
| CCGCAATTGGACGGTGGGAT+TGG | - | chr5_4:48128373-48128392 | Msa0855070:intron | 60.0% | |
| CTGCCGTTGGCCACTGAGAT+TGG | - | chr5_4:48129536-48129555 | Msa0855070:intron | 60.0% | |
| CCTTCACATCAGCAGGTGGC+CGG | + | chr5_4:48129700-48129719 | None:intergenic | 60.0% | |
| CGGCCACCTGCTGATGTGAA+GGG | - | chr5_4:48129698-48129717 | Msa0855070:CDS | 60.0% | |
| GGCCACCTGCTGATGTGAAG+GGG | - | chr5_4:48129699-48129718 | Msa0855070:CDS | 60.0% | |
| ! | GCTCCCAAAAGCGTGTGCTG+AGG | - | chr5_4:48130242-48130261 | Msa0855070:intron | 60.0% |
| !! | TTTGGCTTGACGCTAGGCGG+CGG | + | chr5_4:48131175-48131194 | None:intergenic | 60.0% |
| CAGCTGACGACGACTCGTCA+GGG | + | chr5_4:48132195-48132214 | None:intergenic | 60.0% | |
| GTGCATCCAGGACGATGCCT+CGG | + | chr5_4:48132235-48132254 | None:intergenic | 60.0% | |
| GCCTAGTGCTGCGGGACAAT+TGG | - | chr5_4:48132522-48132541 | Msa0855070:CDS | 60.0% | |
| ATGGGCCCCCCGCAATTGGA+CGG | - | chr5_4:48128364-48128383 | Msa0855070:intron | 65.0% | |
| TCCCACCGTCCAATTGCGGG+GGG | + | chr5_4:48128372-48128391 | None:intergenic | 65.0% | |
| GACGGTGGGATTGGACCCCT+AGG | - | chr5_4:48128382-48128401 | Msa0855070:intron | 65.0% | |
| CCGGCCACCTGCTGATGTGA+AGG | - | chr5_4:48129697-48129716 | Msa0855070:CDS | 65.0% | |
| CCAGCTGACGACGACTCGTC+AGG | + | chr5_4:48132196-48132215 | None:intergenic | 65.0% | |
| CCTGACGAGTCGTCGTCAGC+TGG | - | chr5_4:48132193-48132212 | Msa0855070:intron | 65.0% | |
| GCCCCCCGCAATTGGACGGT+GGG | - | chr5_4:48128368-48128387 | Msa0855070:intron | 70.0% | |
| ACATCAGCAGGTGGCCGGCG+TGG | + | chr5_4:48129695-48129714 | None:intergenic | 70.0% | |
| GGCCCCCCGCAATTGGACGG+TGG | - | chr5_4:48128367-48128386 | Msa0855070:intron | 75.0% | |
| TCAGCAGGTGGCCGGCGTGG+TGG | + | chr5_4:48129692-48129711 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 48127326 | 48132843 | 48127326 | ID=Msa0855070;Name=Msa0855070 |
| chr5_4 | mRNA | 48127326 | 48132843 | 48127326 | ID=Msa0855070-mRNA-1;Parent=Msa0855070;Name=Msa0855070-mRNA-1;_AED=0.10;_eAED=0.10;_QI=213|1|0.90|1|1|1|11|231|786 |
| chr5_4 | exon | 48127326 | 48128089 | 48127326 | ID=Msa0855070-mRNA-1:exon:15187;Parent=Msa0855070-mRNA-1 |
| chr5_4 | exon | 48128422 | 48128489 | 48128422 | ID=Msa0855070-mRNA-1:exon:15186;Parent=Msa0855070-mRNA-1 |
| chr5_4 | exon | 48128792 | 48128838 | 48128792 | ID=Msa0855070-mRNA-1:exon:15185;Parent=Msa0855070-mRNA-1 |
| chr5_4 | exon | 48128935 | 48129360 | 48128935 | ID=Msa0855070-mRNA-1:exon:15184;Parent=Msa0855070-mRNA-1 |
| chr5_4 | exon | 48129465 | 48129541 | 48129465 | ID=Msa0855070-mRNA-1:exon:15183;Parent=Msa0855070-mRNA-1 |
| chr5_4 | exon | 48129620 | 48129794 | 48129620 | ID=Msa0855070-mRNA-1:exon:15182;Parent=Msa0855070-mRNA-1 |
| chr5_4 | exon | 48129906 | 48130002 | 48129906 | ID=Msa0855070-mRNA-1:exon:15181;Parent=Msa0855070-mRNA-1 |
| chr5_4 | exon | 48130380 | 48131020 | 48130380 | ID=Msa0855070-mRNA-1:exon:15180;Parent=Msa0855070-mRNA-1 |
| chr5_4 | exon | 48131158 | 48131259 | 48131158 | ID=Msa0855070-mRNA-1:exon:15179;Parent=Msa0855070-mRNA-1 |
| chr5_4 | exon | 48131361 | 48131442 | 48131361 | ID=Msa0855070-mRNA-1:exon:15178;Parent=Msa0855070-mRNA-1 |
| chr5_4 | exon | 48132518 | 48132843 | 48132518 | ID=Msa0855070-mRNA-1:exon:15177;Parent=Msa0855070-mRNA-1 |
| chr5_4 | five_prime_UTR | 48132631 | 48132843 | 48132631 | ID=Msa0855070-mRNA-1:five_prime_utr;Parent=Msa0855070-mRNA-1 |
| chr5_4 | CDS | 48132518 | 48132630 | 48132518 | ID=Msa0855070-mRNA-1:cds;Parent=Msa0855070-mRNA-1 |
| chr5_4 | CDS | 48131361 | 48131442 | 48131361 | ID=Msa0855070-mRNA-1:cds;Parent=Msa0855070-mRNA-1 |
| chr5_4 | CDS | 48131158 | 48131259 | 48131158 | ID=Msa0855070-mRNA-1:cds;Parent=Msa0855070-mRNA-1 |
| chr5_4 | CDS | 48130380 | 48131020 | 48130380 | ID=Msa0855070-mRNA-1:cds;Parent=Msa0855070-mRNA-1 |
| chr5_4 | CDS | 48129906 | 48130002 | 48129906 | ID=Msa0855070-mRNA-1:cds;Parent=Msa0855070-mRNA-1 |
| chr5_4 | CDS | 48129620 | 48129794 | 48129620 | ID=Msa0855070-mRNA-1:cds;Parent=Msa0855070-mRNA-1 |
| chr5_4 | CDS | 48129465 | 48129541 | 48129465 | ID=Msa0855070-mRNA-1:cds;Parent=Msa0855070-mRNA-1 |
| chr5_4 | CDS | 48128935 | 48129360 | 48128935 | ID=Msa0855070-mRNA-1:cds;Parent=Msa0855070-mRNA-1 |
| chr5_4 | CDS | 48128792 | 48128838 | 48128792 | ID=Msa0855070-mRNA-1:cds;Parent=Msa0855070-mRNA-1 |
| chr5_4 | CDS | 48128422 | 48128489 | 48128422 | ID=Msa0855070-mRNA-1:cds;Parent=Msa0855070-mRNA-1 |
| chr5_4 | CDS | 48127557 | 48128089 | 48127557 | ID=Msa0855070-mRNA-1:cds;Parent=Msa0855070-mRNA-1 |
| chr5_4 | three_prime_UTR | 48127326 | 48127556 | 48127326 | ID=Msa0855070-mRNA-1:three_prime_utr;Parent=Msa0855070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
