AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0856800


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0856800 MtrunA17_Chr5g0435151 94.068 354 2 3 4 344 3 350 0.0 657
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0856800 AT5G37850.4 80.392 306 47 1 52 344 4 309 3.20e-179 499
Msa0856800 AT5G37850.2 80.392 306 47 1 52 344 4 309 3.20e-179 499
Msa0856800 AT5G37850.1 80.130 307 48 1 51 344 37 343 1.88e-178 498
Msa0856800 AT5G37850.3 73.529 306 40 2 52 344 38 315 1.10e-154 437

Find 103 sgRNAs with CRISPR-Local

Find 588 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTAAAATAAGCTGGTATTT+TGG 0.109128 5_4:-51799792 None:intergenic
TCTTGATCAATTATAGAAAT+TGG 0.204353 5_4:+51800802 Msa0856800:three_prime_UTR
GAAAACTGCACGGAATTAAT+TGG 0.219716 5_4:-51793101 None:intergenic
GGAAAATAATGAGTTTCTTC+TGG 0.232534 5_4:-51792447 None:intergenic
ATGGAGTAACGTTGCGGTTT+TGG 0.233733 5_4:-51792378 None:intergenic
AATTGCAATCTTAAATTGTT+TGG 0.234230 5_4:-51799768 None:intergenic
GATCTCTAAACTGGATGATT+TGG 0.234798 5_4:-51800678 None:intergenic
ACACTCATTACTGGAATATT+AGG 0.252935 5_4:+51800968 Msa0856800:three_prime_UTR
GCTGAGTACTCGACCGGTTT+CGG 0.286157 5_4:-51792646 None:intergenic
AGTTTCATTACACTCATTAC+TGG 0.305689 5_4:+51800959 Msa0856800:three_prime_UTR
TTCTGGGGAAAATGAAAATC+TGG 0.310927 5_4:-51792430 None:intergenic
TACTATACTCACTTATTAAC+AGG 0.313318 5_4:+51793425 Msa0856800:CDS
CATTCAATCTCACACTGTTC+AGG 0.316627 5_4:+51792668 Msa0856800:CDS
ATTACAAGTATAAATGTAGA+TGG 0.322665 5_4:+51798693 Msa0856800:CDS
ATTGCAATCTTAAATTGTTT+GGG 0.334187 5_4:-51799767 None:intergenic
AATTAACCTGATCTCTAAAC+TGG 0.348609 5_4:-51800687 None:intergenic
CTCATGACCGCACTTCTTCT+CGG 0.358402 5_4:+51800231 Msa0856800:CDS
ATCTCACCATATGTAAGCTT+GGG 0.360323 5_4:-51795003 None:intergenic
ACAATAAATCATTGGCTTCA+AGG 0.365121 5_4:-51793403 None:intergenic
TTTCCTTCATCACCCAATAC+TGG 0.366568 5_4:-51796631 None:intergenic
GAAAATAATGAGTTTCTTCT+GGG 0.368587 5_4:-51792446 None:intergenic
AATTCTGCTTCAAACTGGTT+GGG 0.370817 5_4:-51796986 None:intergenic
GCAGCCTTCTCAAGGTTGTC+CGG 0.375285 5_4:-51800371 None:intergenic
ATATAAATCAAATTTGTGTT+AGG 0.379196 5_4:+51800893 Msa0856800:three_prime_UTR
ATGAAAATCTGGAAGGGGTT+GGG 0.395070 5_4:-51792419 None:intergenic
TTAGCTCTCCCTTCCGAAAC+CGG 0.402158 5_4:+51792633 Msa0856800:CDS
ATCTCTAAACTGGATGATTT+GGG 0.402474 5_4:-51800677 None:intergenic
TATTTGTAGCAAACCTTTGA+AGG 0.414189 5_4:-51798210 None:intergenic
GATGGGAATCTTCTCCTCAT+TGG 0.430577 5_4:+51798711 Msa0856800:CDS
GAATTGAGTTACAAGCTTCT+CGG 0.437898 5_4:-51798176 None:intergenic
AATCATCCAGTTTAGAGATC+AGG 0.438326 5_4:+51800681 Msa0856800:CDS
TCAGTAATTCTGCTTCAAAC+TGG 0.439746 5_4:-51796991 None:intergenic
ATTCTGCTTCAAACTGGTTG+GGG 0.465962 5_4:-51796985 None:intergenic
CATCTTATATCATGAACAAA+AGG 0.471751 5_4:+51792248 Msa0856800:five_prime_UTR
TAATTCTGCTTCAAACTGGT+TGG 0.476012 5_4:-51796987 None:intergenic
TCAGCTTTGAATGTGATTTG+TGG 0.476834 5_4:-51800734 None:intergenic
AATCTCACCATATGTAAGCT+TGG 0.477830 5_4:-51795004 None:intergenic
TGACCGCACTTCTTCTCGGT+TGG 0.480032 5_4:+51800235 Msa0856800:CDS
CAGCCTTCTCAAGGTTGTCC+GGG 0.480511 5_4:-51800370 None:intergenic
ATAAACCCCAAGCTTACATA+TGG 0.480838 5_4:+51794997 Msa0856800:CDS
GTCAGTATGTGATCCAGTAT+TGG 0.485806 5_4:+51796618 Msa0856800:intron
AATGAAAATCTGGAAGGGGT+TGG 0.487190 5_4:-51792420 None:intergenic
AGCTGAAATATACAGCTAAA+CGG 0.487483 5_4:+51800751 Msa0856800:exon
TCAGTATGTGATCCAGTATT+GGG 0.487775 5_4:+51796619 Msa0856800:intron
GTGGACTGCGGATATCATCT+TGG 0.488939 5_4:-51800715 None:intergenic
TCATGCAGCTGGACCTTCAA+AGG 0.493732 5_4:+51798197 Msa0856800:CDS
GGGGTCAACATTGAAGCGAT+TGG 0.494460 5_4:-51796965 None:intergenic
TATTACTCTCAGGGTTATGT+TGG 0.500380 5_4:+51793029 Msa0856800:intron
CCTCATTGGAAGCCATCTAA+AGG 0.505751 5_4:+51798725 Msa0856800:CDS
TGTAACTCAATTCATGCAGC+TGG 0.505953 5_4:+51798186 Msa0856800:CDS
CAACTCTGGGATCTAATTGA+AGG 0.506637 5_4:+51793380 Msa0856800:CDS
AGTATAGTACAATAAATCAT+TGG 0.506948 5_4:-51793411 None:intergenic
GATTGAGTGTGTAGAAAGAA+TGG 0.508049 5_4:-51792397 None:intergenic
CGAGTTCTGCAGCCTTCTCA+AGG 0.509699 5_4:-51800379 None:intergenic
TGGAAGCCATCTAAAGGAAA+AGG 0.511024 5_4:+51798731 Msa0856800:CDS
GCTTTATGTTCCACAAGAGC+TGG 0.512326 5_4:+51796654 Msa0856800:CDS
CTTGATGATTACAAAAGTGC+TGG 0.513356 5_4:+51800647 Msa0856800:CDS
GGGGTTTATTGAGCGAAGCT+TGG 0.515208 5_4:-51794983 None:intergenic
TTGATCAAGACACAGGCATC+CGG 0.516562 5_4:-51800789 None:intergenic
ATGTTCAATTATAGCACTGC+AGG 0.518520 5_4:+51800832 Msa0856800:three_prime_UTR
AAATCAAATTTGTGTTAGGT+CGG 0.524535 5_4:+51800897 Msa0856800:three_prime_UTR
TACACTGTCACCAGCTCTTG+TGG 0.526610 5_4:-51796664 None:intergenic
CCTTTAGATGGCTTCCAATG+AGG 0.528708 5_4:-51798725 None:intergenic
ATTCATACCGTAAAATAAGC+TGG 0.529696 5_4:-51799800 None:intergenic
GGGAGAGCTAAGGAAAGAAT+CGG 0.537810 5_4:-51792621 None:intergenic
GCAATCTTAAATTGTTTGGG+AGG 0.538067 5_4:-51799764 None:intergenic
CTTATATCATGAACAAAAGG+AGG 0.539851 5_4:+51792251 Msa0856800:five_prime_UTR
TTACAAGTATAAATGTAGAT+GGG 0.542416 5_4:+51798694 Msa0856800:CDS
TTGAATGCTGAGTACTCGAC+CGG 0.551447 5_4:-51792652 None:intergenic
GTTGCTGTCCATTTAAAACC+TGG 0.567429 5_4:-51793361 None:intergenic
AGGATTCAGTCTGAAGAAGA+TGG 0.568689 5_4:+51798153 Msa0856800:intron
TTTAAATGGACAGCAACTCT+GGG 0.571824 5_4:+51793367 Msa0856800:CDS
AGTACTCGACCGGTTTCGGA+AGG 0.577273 5_4:-51792642 None:intergenic
TCTATAATTGATCAAGACAC+AGG 0.582423 5_4:-51800796 None:intergenic
CAGAATTACTGACAGGACTC+AGG 0.582541 5_4:+51797002 Msa0856800:CDS
GGGAAAATGAAAATCTGGAA+GGG 0.582947 5_4:-51792425 None:intergenic
AAACTCGAGGAATTCATCAA+TGG 0.583692 5_4:+51792593 Msa0856800:CDS
ACTCGCGGTATCAAGCGTAC+AGG 0.589125 5_4:+51800397 Msa0856800:CDS
TGGTGACAGTGTACCGTGAG+AGG 0.589337 5_4:+51796674 Msa0856800:CDS
GATCCAGTATTGGGTGATGA+AGG 0.594822 5_4:+51796628 Msa0856800:CDS
TTTGAAGCAGAATTACTGAC+AGG 0.602351 5_4:+51796995 Msa0856800:CDS
TTCTGCTTCAAACTGGTTGG+GGG 0.607738 5_4:-51796984 None:intergenic
GTACTCGACCGGTTTCGGAA+GGG 0.612979 5_4:-51792641 None:intergenic
TCTCACCATATGTAAGCTTG+GGG 0.617919 5_4:-51795002 None:intergenic
ACGGTGATATGATTTGAAGC+CGG 0.624030 5_4:+51800770 Msa0856800:three_prime_UTR
ATGAATCAAAGAGACAAGGA+AGG 0.627153 5_4:-51792331 None:intergenic
GGATCAGTCTTACCCTCTCA+CGG 0.627957 5_4:-51796687 None:intergenic
GGTGACAGTGTACCGTGAGA+GGG 0.631189 5_4:+51796675 Msa0856800:CDS
TCATAGCCCAAAAGTTGCAG+AGG 0.634972 5_4:-51793071 None:intergenic
TCATTCGTTTCAGAAACACC+CGG 0.638652 5_4:+51800352 Msa0856800:intron
TGAGAAGGCTGCAGAACTCG+CGG 0.646112 5_4:+51800382 Msa0856800:CDS
GGAAAATGAAAATCTGGAAG+GGG 0.646477 5_4:-51792424 None:intergenic
GGGGAAAATGAAAATCTGGA+AGG 0.652043 5_4:-51792426 None:intergenic
TTATATCATGAACAAAAGGA+GGG 0.654827 5_4:+51792252 Msa0856800:five_prime_UTR
ACACCCGGACAACCTTGAGA+AGG 0.658420 5_4:+51800367 Msa0856800:CDS
GAAAGAATGGAGTAACGTTG+CGG 0.658771 5_4:-51792384 None:intergenic
AAAATAATGAGTTTCTTCTG+GGG 0.661319 5_4:-51792445 None:intergenic
GGTTTCGGAAGGGAGAGCTA+AGG 0.664576 5_4:-51792631 None:intergenic
ATTCAAGGAAGAGAAACTCG+AGG 0.665109 5_4:+51792580 Msa0856800:CDS
TGAATGTGATTTGTGGACTG+CGG 0.665592 5_4:-51800727 None:intergenic
AGAGCTAAGGAAAGAATCGG+AGG 0.674260 5_4:-51792618 None:intergenic
ATGAATGAATCAAAGAGACA+AGG 0.683653 5_4:-51792335 None:intergenic
GCTCCAACCGAGAAGAAGTG+CGG 0.693199 5_4:-51800238 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTCATAATATGAAATAAA+AGG + chr5_4:51793884-51793903 Msa0856800:intron 10.0%
!! ATTCATAATATGAAATAAAA+GGG + chr5_4:51793885-51793904 Msa0856800:intron 10.0%
!!! GCTATTTTTAATAAAAAAAT+TGG + chr5_4:51794264-51794283 Msa0856800:intron 10.0%
!!! AAATTTTTGTTTTAAAAAAC+AGG - chr5_4:51795380-51795399 None:intergenic 10.0%
!! AAAAATAAATAAAATGAGTT+GGG - chr5_4:51795578-51795597 None:intergenic 10.0%
!!! TATTTTTTTTTATAATAGGT+AGG + chr5_4:51796023-51796042 Msa0856800:intron 10.0%
!! TTAATAAAAAAATACTATTG+AGG - chr5_4:51797295-51797314 None:intergenic 10.0%
!! ATATATAATTACAACATATT+AGG + chr5_4:51798004-51798023 Msa0856800:intron 10.0%
!! AAAAAAAAAAAATATCACAT+TGG - chr5_4:51799317-51799336 None:intergenic 10.0%
!!! TTTTAATTTTATATACTCAA+TGG + chr5_4:51799672-51799691 Msa0856800:intron 10.0%
!! TATACAATAAATTTATTGTT+TGG + chr5_4:51799826-51799845 Msa0856800:intron 10.0%
!!! GAAATTTTTTATATTCATTT+TGG + chr5_4:51800571-51800590 Msa0856800:intron 10.0%
!! AAAAAAAAAAAGAATTTCAA+AGG - chr5_4:51800858-51800877 None:intergenic 10.0%
!!! GTGTAAAAATTTTATATTGA+TGG + chr5_4:51792274-51792293 Msa0856800:five_prime_UTR 15.0%
!! TCTAGTATTAAATTTATTAG+TGG - chr5_4:51793803-51793822 None:intergenic 15.0%
!! TAACATATAATTTCTAATAG+TGG - chr5_4:51794812-51794831 None:intergenic 15.0%
!! TTATTAGCAAAAAATAATTG+AGG + chr5_4:51795094-51795113 Msa0856800:intron 15.0%
!! CAAAAATAAATAAAATGAGT+TGG - chr5_4:51795579-51795598 None:intergenic 15.0%
!!! CAACTCATTTTATTTATTTT+TGG + chr5_4:51795577-51795596 Msa0856800:intron 15.0%
!!! TTAAAAATAAAAGAGTGTTT+AGG - chr5_4:51795645-51795664 None:intergenic 15.0%
!! AGAAAAATAACATGAAATTT+AGG - chr5_4:51795818-51795837 None:intergenic 15.0%
!!! ATATTTTTTTCTTTTGCTAT+TGG + chr5_4:51795876-51795895 Msa0856800:intron 15.0%
!! ATCATGTATATTATTACATA+TGG - chr5_4:51796735-51796754 None:intergenic 15.0%
!!! TAACCATATAAATATTTTAC+AGG + chr5_4:51797327-51797346 Msa0856800:intron 15.0%
!!! AACCATATAAATATTTTACA+GGG + chr5_4:51797328-51797347 Msa0856800:intron 15.0%
!!! ATTTTTCAAATTGCAATATT+GGG - chr5_4:51797585-51797604 None:intergenic 15.0%
!!! AATTTTTCAAATTGCAATAT+TGG - chr5_4:51797586-51797605 None:intergenic 15.0%
!! TAACACTAAAGAATAAAAAT+AGG - chr5_4:51798037-51798056 None:intergenic 15.0%
!!! TATTTTATATTTTCCTCTTA+CGG + chr5_4:51798055-51798074 Msa0856800:intron 15.0%
!!! TAGTATTTTCTTTTTAAAAG+TGG + chr5_4:51798411-51798430 Msa0856800:intron 15.0%
!! ATATATATATATATTACCAG+TGG - chr5_4:51798786-51798805 None:intergenic 15.0%
!! ATATAAATCAAATTTGTGTT+AGG + chr5_4:51800893-51800912 Msa0856800:three_prime_UTR 15.0%
!! AGTATAGTACAATAAATCAT+TGG - chr5_4:51793414-51793433 None:intergenic 20.0%
!! TGACAATTAAATTATACAGA+TGG - chr5_4:51793480-51793499 None:intergenic 20.0%
!!! GTATTTCTTTTTGAATAGTA+TGG - chr5_4:51793828-51793847 None:intergenic 20.0%
!! GAACATTTAAGTAATGTTTA+AGG - chr5_4:51793858-51793877 None:intergenic 20.0%
!! TTGTACTAGTTGTATATAAT+TGG - chr5_4:51793936-51793955 None:intergenic 20.0%
!!! GTTATTGTTTTACTACTTAT+AGG + chr5_4:51793956-51793975 Msa0856800:intron 20.0%
!!! ATAGCGGAAAAAATAATTTT+AGG + chr5_4:51794188-51794207 Msa0856800:intron 20.0%
!! TATTAAAAATAGCTCATGTT+TGG - chr5_4:51794257-51794276 None:intergenic 20.0%
!! AATAAAAAAATTGGAAGAGT+CGG + chr5_4:51794273-51794292 Msa0856800:intron 20.0%
!! AAGTCAGAATAATCAAAATA+AGG - chr5_4:51794891-51794910 None:intergenic 20.0%
!!! TTCTATTTAAGACATAGATT+TGG + chr5_4:51795049-51795068 Msa0856800:intron 20.0%
!! ATAGGAACAAAATTTAACTA+CGG + chr5_4:51795141-51795160 Msa0856800:intron 20.0%
!! TTTATGAAGGGAAAAAAATT+TGG + chr5_4:51795546-51795565 Msa0856800:intron 20.0%
!! TTATGAAGGGAAAAAAATTT+GGG + chr5_4:51795547-51795566 Msa0856800:intron 20.0%
!! AAAATACAAGAGAAATAATC+TGG - chr5_4:51795668-51795687 None:intergenic 20.0%
!! TATATCTATGCATATAAGTA+TGG - chr5_4:51795859-51795878 None:intergenic 20.0%
!! AAAATAACAATGAGGAATAA+GGG - chr5_4:51796459-51796478 None:intergenic 20.0%
!! AAAAATAACAATGAGGAATA+AGG - chr5_4:51796460-51796479 None:intergenic 20.0%
!! TGACAATAAAAATAACAATG+AGG - chr5_4:51796467-51796486 None:intergenic 20.0%
!! AGTAAAGGTAACATTTAAAT+GGG - chr5_4:51796905-51796924 None:intergenic 20.0%
!! AAGTAAAGGTAACATTTAAA+TGG - chr5_4:51796906-51796925 None:intergenic 20.0%
!! TATAAGAAAAATGACATGTA+AGG + chr5_4:51797096-51797115 Msa0856800:intron 20.0%
!! ATAAGAAAAATGACATGTAA+GGG + chr5_4:51797097-51797116 Msa0856800:intron 20.0%
!!! TGTCTATCTCATATTTTTTA+AGG + chr5_4:51797654-51797673 Msa0856800:intron 20.0%
!!! GTCTATCTCATATTTTTTAA+GGG + chr5_4:51797655-51797674 Msa0856800:intron 20.0%
!!! TCTATCTCATATTTTTTAAG+GGG + chr5_4:51797656-51797675 Msa0856800:intron 20.0%
!! AATATCTTATACATTTGAGA+CGG - chr5_4:51797762-51797781 None:intergenic 20.0%
!!! TTTTTGAACATTTGTTGTTA+TGG + chr5_4:51797890-51797909 Msa0856800:intron 20.0%
!! AAATATAATTTGAGAAGACA+TGG - chr5_4:51798532-51798551 None:intergenic 20.0%
!! ATTACAAGTATAAATGTAGA+TGG + chr5_4:51798693-51798712 Msa0856800:CDS 20.0%
!! TTACAAGTATAAATGTAGAT+GGG + chr5_4:51798694-51798713 Msa0856800:CDS 20.0%
!!! AATCTTATTTGACCAAAAAA+TGG + chr5_4:51798997-51799016 Msa0856800:intron 20.0%
!!! ATCTTATTTGACCAAAAAAT+GGG + chr5_4:51798998-51799017 Msa0856800:intron 20.0%
!!! AACATTGATTATTCAATCAA+AGG - chr5_4:51799489-51799508 None:intergenic 20.0%
!! ATTGCAATCTTAAATTGTTT+GGG - chr5_4:51799770-51799789 None:intergenic 20.0%
!! AATTGCAATCTTAAATTGTT+TGG - chr5_4:51799771-51799790 None:intergenic 20.0%
!! ATTTCATTGCAAAAAATACA+AGG + chr5_4:51800002-51800021 Msa0856800:intron 20.0%
!! TTTCATTGCAAAAAATACAA+GGG + chr5_4:51800003-51800022 Msa0856800:intron 20.0%
!! TAATGATCACAATATTATGT+AGG + chr5_4:51800607-51800626 Msa0856800:intron 20.0%
!! TCTTGATCAATTATAGAAAT+TGG + chr5_4:51800802-51800821 Msa0856800:three_prime_UTR 20.0%
! CATCTTATATCATGAACAAA+AGG + chr5_4:51792248-51792267 Msa0856800:five_prime_UTR 25.0%
! TTATATCATGAACAAAAGGA+GGG + chr5_4:51792252-51792271 Msa0856800:five_prime_UTR 25.0%
! AAAATAATGAGTTTCTTCTG+GGG - chr5_4:51792448-51792467 None:intergenic 25.0%
! GAAAATAATGAGTTTCTTCT+GGG - chr5_4:51792449-51792468 None:intergenic 25.0%
!! AGAAGAAACTCATTATTTTC+CGG + chr5_4:51792449-51792468 Msa0856800:CDS 25.0%
! GAAAATTGAAGAAGAGAAAA+TGG - chr5_4:51792545-51792564 None:intergenic 25.0%
!!! TCTTTTTTCAATCTGTGAAT+TGG + chr5_4:51792723-51792742 Msa0856800:intron 25.0%
! TAAGTTGTGGATAATGAATA+TGG + chr5_4:51792830-51792849 Msa0856800:intron 25.0%
! CACAGTAAAATAACGAAAAA+TGG - chr5_4:51793319-51793338 None:intergenic 25.0%
! TACTATACTCACTTATTAAC+AGG + chr5_4:51793425-51793444 Msa0856800:CDS 25.0%
! TCTCATAAATGGACAATAAA+TGG + chr5_4:51794414-51794433 Msa0856800:intron 25.0%
! AATAGAAAAATGCCAAAAAC+CGG - chr5_4:51794623-51794642 None:intergenic 25.0%
! CATATAGTTTCTAATACCAT+AGG - chr5_4:51794695-51794714 None:intergenic 25.0%
! GAAACTATATGTTCAAATCT+TGG + chr5_4:51794704-51794723 Msa0856800:intron 25.0%
!! AATCTAACTAATGCATTTTC+AGG + chr5_4:51794913-51794932 Msa0856800:intron 25.0%
!!! AATGCATTTTCAGGTTATAT+TGG + chr5_4:51794922-51794941 Msa0856800:intron 25.0%
!! GTTAAATTTTGTTCCTATAC+TGG - chr5_4:51795139-51795158 None:intergenic 25.0%
! TGGCTTATACAAAAACAATT+AGG - chr5_4:51796256-51796275 None:intergenic 25.0%
!! AAAATAATCTAAAACAGCTC+AGG + chr5_4:51796312-51796331 Msa0856800:intron 25.0%
! AACTAAACTTAACTGGATTT+GGG - chr5_4:51796432-51796451 None:intergenic 25.0%
! AAACTAAACTTAACTGGATT+TGG - chr5_4:51796433-51796452 None:intergenic 25.0%
!! GATTTATACCTTTTGTATGT+TGG + chr5_4:51796515-51796534 Msa0856800:intron 25.0%
! AACAAAACACACATATGTAT+AGG - chr5_4:51796593-51796612 None:intergenic 25.0%
! TCAACATCTAATTTCAGTTA+GGG - chr5_4:51796824-51796843 None:intergenic 25.0%
! ATCAACATCTAATTTCAGTT+AGG - chr5_4:51796825-51796844 None:intergenic 25.0%
!! CAAACATATTTTTCTTTGTC+TGG + chr5_4:51796879-51796898 Msa0856800:intron 25.0%
! CTGTTGAGTAATATTAATCA+TGG - chr5_4:51797036-51797055 None:intergenic 25.0%
! GTCCCTGTAAAATATTTATA+TGG - chr5_4:51797333-51797352 None:intergenic 25.0%
! TTTCAAATTATTAGCTGTGT+TGG + chr5_4:51797460-51797479 Msa0856800:intron 25.0%
!! AACATATTTCCATTTTCATG+AGG + chr5_4:51797542-51797561 Msa0856800:intron 25.0%
!!! TTTTTTAGTCCTCATGAAAA+TGG - chr5_4:51797554-51797573 None:intergenic 25.0%
!!! CTATCTCATATTTTTTAAGG+GGG + chr5_4:51797657-51797676 Msa0856800:intron 25.0%
! CATGGGCTTATAAATATTAA+AGG + chr5_4:51797734-51797753 Msa0856800:intron 25.0%
!! ATATCTTATACATTTGAGAC+GGG - chr5_4:51797761-51797780 None:intergenic 25.0%
!!! TATTTTTGTTTTATGCCTGT+TGG + chr5_4:51797778-51797797 Msa0856800:intron 25.0%
!!! ATTTTTGTTTTATGCCTGTT+GGG + chr5_4:51797779-51797798 Msa0856800:intron 25.0%
! AGATTATTCTGATCTTTAGA+AGG + chr5_4:51797954-51797973 Msa0856800:intron 25.0%
! ATGAACATACATTAGCTAAA+TGG - chr5_4:51798661-51798680 None:intergenic 25.0%
!! TTTTCAGAAATGTGAAATCA+TGG - chr5_4:51798960-51798979 None:intergenic 25.0%
!! TCTTATTTGACCAAAAAATG+GGG + chr5_4:51798999-51799018 Msa0856800:intron 25.0%
!! AATTTAGAATCTTGACAATG+AGG + chr5_4:51799055-51799074 Msa0856800:intron 25.0%
!! ATTTAGAATCTTGACAATGA+GGG + chr5_4:51799056-51799075 Msa0856800:intron 25.0%
!! CTATATTGACTAATAATAGC+CGG + chr5_4:51799242-51799261 Msa0856800:intron 25.0%
!! GTAAAATAAGCTGGTATTTT+GGG - chr5_4:51799794-51799813 None:intergenic 25.0%
!!! CAAAATACCAGCTTATTTTA+CGG + chr5_4:51799793-51799812 Msa0856800:CDS 25.0%
!! TATACTAATGTTTTCAATCG+TGG - chr5_4:51800099-51800118 None:intergenic 25.0%
!!! TACGCAATTTATTTTAATGC+TGG + chr5_4:51800193-51800212 Msa0856800:intron 25.0%
!!! AATTTATTTTAATGCTGGCA+GGG + chr5_4:51800198-51800217 Msa0856800:intron 25.0%
! AGACTAATAAGTAAATGACA+AGG - chr5_4:51800291-51800310 None:intergenic 25.0%
!! AACGAATGAAAACACATTTT+AGG - chr5_4:51800341-51800360 None:intergenic 25.0%
! AAACAATGATTCCACAATAT+TGG - chr5_4:51800493-51800512 None:intergenic 25.0%
! ACATTTAAAAGCAAAGACAT+AGG - chr5_4:51800529-51800548 None:intergenic 25.0%
! AAATCAAATTTGTGTTAGGT+CGG + chr5_4:51800897-51800916 Msa0856800:three_prime_UTR 25.0%
CTTATATCATGAACAAAAGG+AGG + chr5_4:51792251-51792270 Msa0856800:five_prime_UTR 30.0%
ATGAATGAATCAAAGAGACA+AGG - chr5_4:51792338-51792357 None:intergenic 30.0%
GGAAAATAATGAGTTTCTTC+TGG - chr5_4:51792450-51792469 None:intergenic 30.0%
! ATTTTCCGATTTCAGATTCA+AGG + chr5_4:51792565-51792584 Msa0856800:intron 30.0%
GACAATTCAGAACAAACAAT+AGG - chr5_4:51792788-51792807 None:intergenic 30.0%
CATTCAAAAGTTGTAAGTTG+TGG + chr5_4:51792817-51792836 Msa0856800:intron 30.0%
!! ATTAACCACAATTTTGATCG+TGG + chr5_4:51792875-51792894 Msa0856800:intron 30.0%
AGTTAACTCAGTTAAGTGAA+TGG - chr5_4:51792911-51792930 None:intergenic 30.0%
! ATTAACTAGATGTTCTAGGT+GGG + chr5_4:51792946-51792965 Msa0856800:intron 30.0%
AGAGAAGAAAAATAATCCCA+TGG + chr5_4:51793255-51793274 Msa0856800:intron 30.0%
!! TTTTCGTTATTTTACTGTGC+AGG + chr5_4:51793320-51793339 Msa0856800:intron 30.0%
!! TTTCGTTATTTTACTGTGCA+GGG + chr5_4:51793321-51793340 Msa0856800:intron 30.0%
!! ACAATAAATCATTGGCTTCA+AGG - chr5_4:51793406-51793425 None:intergenic 30.0%
AGGGATAGCAAAATCAAAAA+TGG + chr5_4:51793904-51793923 Msa0856800:intron 30.0%
!!! ACTATCCTAGTTTTGCTATT+AGG + chr5_4:51794121-51794140 Msa0856800:intron 30.0%
!!! CTATCCTAGTTTTGCTATTA+GGG + chr5_4:51794122-51794141 Msa0856800:intron 30.0%
GGAATAGAATAACGATTTGA+TGG - chr5_4:51794381-51794400 None:intergenic 30.0%
ATGGAAGAGATTACGTATTA+TGG - chr5_4:51794460-51794479 None:intergenic 30.0%
AGCTGAACATAGCTTATATA+TGG - chr5_4:51794479-51794498 None:intergenic 30.0%
GAAATAACTGAATAGTGTTG+TGG - chr5_4:51794594-51794613 None:intergenic 30.0%
! ATTCAGTTATTTCACATAGC+CGG + chr5_4:51794601-51794620 Msa0856800:intron 30.0%
TAGGAGATATATTTGCAAGA+AGG - chr5_4:51794676-51794695 None:intergenic 30.0%
TCTTGCAAATATATCTCCTA+TGG + chr5_4:51794676-51794695 Msa0856800:intron 30.0%
! TTCTTTTCTCAACACAGTAT+TGG + chr5_4:51794951-51794970 Msa0856800:CDS 30.0%
! GTTTAGAATATGACCAGTAT+AGG + chr5_4:51795123-51795142 Msa0856800:intron 30.0%
AACAAAAATTTCTGATCACG+TGG + chr5_4:51795389-51795408 Msa0856800:intron 30.0%
TGGCATGTAGAAAAAACAAA+GGG - chr5_4:51795454-51795473 None:intergenic 30.0%
TTGGCATGTAGAAAAAACAA+AGG - chr5_4:51795455-51795474 None:intergenic 30.0%
!!! TGTTTTTTCTACATGCCAAT+TGG + chr5_4:51795456-51795475 Msa0856800:intron 30.0%
TTACACTGTAACAAACCAAT+TGG - chr5_4:51795474-51795493 None:intergenic 30.0%
!! AATTGGTTTGTTACAGTGTA+AGG + chr5_4:51795473-51795492 Msa0856800:intron 30.0%
!!! AGCTTGGGTTTTTTTATGAA+GGG + chr5_4:51795534-51795553 Msa0856800:intron 30.0%
TTTGAGAGAATGGAGAAATT+TGG + chr5_4:51795611-51795630 Msa0856800:intron 30.0%
AACACACAAATAAACACACA+CGG + chr5_4:51795909-51795928 Msa0856800:intron 30.0%
TTCAGCTGTTTATTCAAACA+GGG - chr5_4:51796155-51796174 None:intergenic 30.0%
ATTCAGCTGTTTATTCAAAC+AGG - chr5_4:51796156-51796175 None:intergenic 30.0%
GACTTATTTGAGCTTATCTA+CGG - chr5_4:51796395-51796414 None:intergenic 30.0%
ACTAAACTTAACTGGATTTG+GGG - chr5_4:51796431-51796450 None:intergenic 30.0%
AAATAAGAACCCAAAAAGCA+TGG - chr5_4:51796848-51796867 None:intergenic 30.0%
TGAGATGTCAAAACAAGTAA+AGG - chr5_4:51796920-51796939 None:intergenic 30.0%
! TACTCAACAGTTTTTCTGTT+TGG + chr5_4:51797046-51797065 Msa0856800:intron 30.0%
AACATGTTTCCAGTTGTATA+GGG - chr5_4:51797203-51797222 None:intergenic 30.0%
! ACTTGACTGTCGTATTATTT+TGG - chr5_4:51797262-51797281 None:intergenic 30.0%
TTCAGTGTAATTACAAGTGT+CGG - chr5_4:51797429-51797448 None:intergenic 30.0%
! TATCTTATACATTTGAGACG+GGG - chr5_4:51797760-51797779 None:intergenic 30.0%
!!! TTTTAGCTTGATGTTGCTTT+TGG + chr5_4:51797862-51797881 Msa0856800:intron 30.0%
TGTTGTTATGGAACTAATTG+AGG + chr5_4:51797902-51797921 Msa0856800:intron 30.0%
CTAAAGATCAGAATAATCTG+TGG - chr5_4:51797953-51797972 None:intergenic 30.0%
TATTTGTAGCAAACCTTTGA+AGG - chr5_4:51798213-51798232 None:intergenic 30.0%
AACAAGAAAGTTTGAATCTG+AGG + chr5_4:51798469-51798488 Msa0856800:intron 30.0%
ATACTTGTAATTACAACCTG+AGG - chr5_4:51798684-51798703 None:intergenic 30.0%
ACGTATAATGTTATTACCAC+TGG + chr5_4:51798767-51798786 Msa0856800:intron 30.0%
CAAATCATTGTAATAACTCG+AGG - chr5_4:51798922-51798941 None:intergenic 30.0%
! TTTCTGAAAACCAAACTGAT+TGG + chr5_4:51798970-51798989 Msa0856800:intron 30.0%
! TTCTGAAAACCAAACTGATT+GGG + chr5_4:51798971-51798990 Msa0856800:intron 30.0%
CTTATTTGACCAAAAAATGG+GGG + chr5_4:51799000-51799019 Msa0856800:intron 30.0%
TATTGTAATGTGACCCTATA+TGG + chr5_4:51799139-51799158 Msa0856800:intron 30.0%
TCATATTACCCAACCATATA+GGG - chr5_4:51799155-51799174 None:intergenic 30.0%
ATCATATTACCCAACCATAT+AGG - chr5_4:51799156-51799175 None:intergenic 30.0%
ATTCCATGTGATATTTCCAA+GGG - chr5_4:51799378-51799397 None:intergenic 30.0%
! AAATCATAGCTTGTAGACAT+AGG - chr5_4:51799565-51799584 None:intergenic 30.0%
ATAAACACACATGATAACCA+TGG + chr5_4:51799587-51799606 Msa0856800:intron 30.0%
! TTTTATTACCTTTTGTGTGC+AGG + chr5_4:51799736-51799755 Msa0856800:intron 30.0%
! TTTATTACCTTTTGTGTGCA+GGG + chr5_4:51799737-51799756 Msa0856800:intron 30.0%
! CGTAAAATAAGCTGGTATTT+TGG - chr5_4:51799795-51799814 None:intergenic 30.0%
ATTCATACCGTAAAATAAGC+TGG - chr5_4:51799803-51799822 None:intergenic 30.0%
!! AGTGGAATTTTAACCCTTTA+TGG - chr5_4:51799904-51799923 None:intergenic 30.0%
AGCAACAGTGTTTATTTGAA+AGG - chr5_4:51799979-51799998 None:intergenic 30.0%
!!! CAATTTATTTTAATGCTGGC+AGG + chr5_4:51800197-51800216 Msa0856800:intron 30.0%
AATGATTCCACAATATTGGA+AGG - chr5_4:51800489-51800508 None:intergenic 30.0%
TGTGGAATCATTGTTTATCT+TGG + chr5_4:51800497-51800516 Msa0856800:intron 30.0%
ATCTCTAAACTGGATGATTT+GGG - chr5_4:51800680-51800699 None:intergenic 30.0%
AATTAACCTGATCTCTAAAC+TGG - chr5_4:51800690-51800709 None:intergenic 30.0%
AGCTGAAATATACAGCTAAA+CGG + chr5_4:51800751-51800770 Msa0856800:exon 30.0%
TCTATAATTGATCAAGACAC+AGG - chr5_4:51800799-51800818 None:intergenic 30.0%
AGTTTCATTACACTCATTAC+TGG + chr5_4:51800959-51800978 Msa0856800:three_prime_UTR 30.0%
ACACTCATTACTGGAATATT+AGG + chr5_4:51800968-51800987 Msa0856800:three_prime_UTR 30.0%
ATGAATCAAAGAGACAAGGA+AGG - chr5_4:51792334-51792353 None:intergenic 35.0%
GATTGAGTGTGTAGAAAGAA+TGG - chr5_4:51792400-51792419 None:intergenic 35.0%
GGAAAATGAAAATCTGGAAG+GGG - chr5_4:51792427-51792446 None:intergenic 35.0%
GGGAAAATGAAAATCTGGAA+GGG - chr5_4:51792428-51792447 None:intergenic 35.0%
! TTCTGGGGAAAATGAAAATC+TGG - chr5_4:51792433-51792452 None:intergenic 35.0%
! CTCTTCCTTGAATCTGAAAT+CGG - chr5_4:51792573-51792592 None:intergenic 35.0%
AAACTCGAGGAATTCATCAA+TGG + chr5_4:51792593-51792612 Msa0856800:CDS 35.0%
CCTAGAACATCTAGTTAATC+AGG - chr5_4:51792945-51792964 None:intergenic 35.0%
CCTGATTAACTAGATGTTCT+AGG + chr5_4:51792942-51792961 Msa0856800:intron 35.0%
! GATTAACTAGATGTTCTAGG+TGG + chr5_4:51792945-51792964 Msa0856800:intron 35.0%
! TTAACTAGATGTTCTAGGTG+GGG + chr5_4:51792947-51792966 Msa0856800:intron 35.0%
TATTCGTCGTTATTACTCTC+AGG + chr5_4:51793019-51793038 Msa0856800:intron 35.0%
ATTCGTCGTTATTACTCTCA+GGG + chr5_4:51793020-51793039 Msa0856800:intron 35.0%
TATTACTCTCAGGGTTATGT+TGG + chr5_4:51793029-51793048 Msa0856800:intron 35.0%
! TGTTTTTCCTCTGCAACTTT+TGG + chr5_4:51793064-51793083 Msa0856800:CDS 35.0%
! GTTTTTCCTCTGCAACTTTT+GGG + chr5_4:51793065-51793084 Msa0856800:CDS 35.0%
GAAAACTGCACGGAATTAAT+TGG - chr5_4:51793104-51793123 None:intergenic 35.0%
TGTTACGTTAGTAGCATTTG+TGG + chr5_4:51793197-51793216 Msa0856800:intron 35.0%
!! GTTGATAGACATTTTGCCAT+GGG - chr5_4:51793274-51793293 None:intergenic 35.0%
!!! AGTTGATAGACATTTTGCCA+TGG - chr5_4:51793275-51793294 None:intergenic 35.0%
TGTCTATCAACTTGAGAATG+AGG + chr5_4:51793283-51793302 Msa0856800:intron 35.0%
TATCAACTTGAGAATGAGGT+GGG + chr5_4:51793287-51793306 Msa0856800:intron 35.0%
!!! TTTAAGGGCCAGGTTTTAAA+TGG + chr5_4:51793353-51793372 Msa0856800:intron 35.0%
! TTTTAAATGGACAGCAACTC+TGG + chr5_4:51793366-51793385 Msa0856800:CDS 35.0%
TTTAAATGGACAGCAACTCT+GGG + chr5_4:51793367-51793386 Msa0856800:CDS 35.0%
GTGTCTATCTCTCTCATAAA+TGG - chr5_4:51794403-51794422 None:intergenic 35.0%
TTATGAGAGAGATAGACACA+AGG - chr5_4:51794339-51794358 None:intergenic 35.0%
GTGTCTATCTCTCTCATAAA+TGG + chr5_4:51794403-51794422 Msa0856800:intron 35.0%
ACTGTGCATACAAACAAGAA+GGG - chr5_4:51794508-51794527 None:intergenic 35.0%
GACTTATTTCAACCACTATG+TGG + chr5_4:51794554-51794573 Msa0856800:intron 35.0%
AAATAGAAGAAGCCACATAG+TGG - chr5_4:51794569-51794588 None:intergenic 35.0%
!! TATTTCACATAGCCGGTTTT+TGG + chr5_4:51794608-51794627 Msa0856800:intron 35.0%
TTGGAAATAGTCTTTCCAGT+TGG + chr5_4:51794723-51794742 Msa0856800:intron 35.0%
AAATAGTCTTTCCAGTTGGT+GGG + chr5_4:51794727-51794746 Msa0856800:intron 35.0%
ATAAACCCCAAGCTTACATA+TGG + chr5_4:51794997-51795016 Msa0856800:CDS 35.0%
ATCTCACCATATGTAAGCTT+GGG - chr5_4:51795006-51795025 None:intergenic 35.0%
AATCTCACCATATGTAAGCT+TGG - chr5_4:51795007-51795026 None:intergenic 35.0%
!! ATGGTGAGATTACTGATTCA+CGG + chr5_4:51795016-51795035 Msa0856800:intron 35.0%
TTGGTCTAAGTCTAACTTAG+AGG + chr5_4:51795068-51795087 Msa0856800:intron 35.0%
!!! TCGTAACGAGTTTTTTGATC+TGG + chr5_4:51795334-51795353 Msa0856800:intron 35.0%
!!! CGTAACGAGTTTTTTGATCT+GGG + chr5_4:51795335-51795354 Msa0856800:intron 35.0%
AAAAAAACCCAAGCTGTACT+GGG - chr5_4:51795529-51795548 None:intergenic 35.0%
TAAAAAAACCCAAGCTGTAC+TGG - chr5_4:51795530-51795549 None:intergenic 35.0%
!!! CAGCTTGGGTTTTTTTATGA+AGG + chr5_4:51795533-51795552 Msa0856800:intron 35.0%
! TAAATAAAATGAGTTGGGCC+AGG - chr5_4:51795573-51795592 None:intergenic 35.0%
TTAGACTCTGTTTGAGAGAA+TGG + chr5_4:51795601-51795620 Msa0856800:intron 35.0%
!!! TTCTTTTGCTATTGGCTTAG+TGG + chr5_4:51795884-51795903 Msa0856800:intron 35.0%
GTGTGTGTTTATTTGTGTGT+TGG - chr5_4:51795910-51795929 None:intergenic 35.0%
ACACACAAATAAACACACAC+GGG + chr5_4:51795910-51795929 Msa0856800:intron 35.0%
! GCTGTGAGGACATTTTATAT+GGG - chr5_4:51795964-51795983 None:intergenic 35.0%
GATCTCATGTTTGACTACAT+TGG + chr5_4:51796109-51796128 Msa0856800:intron 35.0%
! TAGTGGATGAAAACAGCTTA+TGG - chr5_4:51796276-51796295 None:intergenic 35.0%
TAAACACTTGTGAAACTGTC+TGG - chr5_4:51796369-51796388 None:intergenic 35.0%
CTAAACTTAACTGGATTTGG+GGG - chr5_4:51796430-51796449 None:intergenic 35.0%
GGGTTGAAACTAAACTTAAC+TGG - chr5_4:51796439-51796458 None:intergenic 35.0%
AGGTATAAATCATATTCCCC+AGG - chr5_4:51796506-51796525 None:intergenic 35.0%
ATTGACGTCCAACATACAAA+AGG - chr5_4:51796526-51796545 None:intergenic 35.0%
TCAGTATGTGATCCAGTATT+GGG + chr5_4:51796619-51796638 Msa0856800:intron 35.0%
! AGATGTTGATCCATGCTTTT+TGG + chr5_4:51796835-51796854 Msa0856800:intron 35.0%
!! GATGTTGATCCATGCTTTTT+GGG + chr5_4:51796836-51796855 Msa0856800:intron 35.0%
AATTCTGCTTCAAACTGGTT+GGG - chr5_4:51796989-51797008 None:intergenic 35.0%
TAATTCTGCTTCAAACTGGT+TGG - chr5_4:51796990-51797009 None:intergenic 35.0%
TCAGTAATTCTGCTTCAAAC+TGG - chr5_4:51796994-51797013 None:intergenic 35.0%
! TTTGAAGCAGAATTACTGAC+AGG + chr5_4:51796995-51797014 Msa0856800:CDS 35.0%
TTTCTCTTGTACACAAGTTG+TGG + chr5_4:51797158-51797177 Msa0856800:intron 35.0%
TTCTCTTGTACACAAGTTGT+GGG + chr5_4:51797159-51797178 Msa0856800:intron 35.0%
!!! GTTTTTAGTCCCTATACAAC+TGG + chr5_4:51797191-51797210 Msa0856800:intron 35.0%
CAACATGTTTCCAGTTGTAT+AGG - chr5_4:51797204-51797223 None:intergenic 35.0%
CAGAATTAACCTATGAAGCA+CGG + chr5_4:51797353-51797372 Msa0856800:intron 35.0%
ATGTTAATTCCTACGAAGCA+CGG - chr5_4:51797527-51797546 None:intergenic 35.0%
TTGGGTGCATGTGTAAATTT+GGG + chr5_4:51797797-51797816 Msa0856800:intron 35.0%
!!! AAGAGCTTTTTTCTCAGTGT+AGG - chr5_4:51797836-51797855 None:intergenic 35.0%
TGTGATATGAAACCTTCAGA+GGG - chr5_4:51798134-51798153 None:intergenic 35.0%
GAATTGAGTTACAAGCTTCT+CGG - chr5_4:51798179-51798198 None:intergenic 35.0%
GAAAACAAATCCGATCTTTC+TGG + chr5_4:51798281-51798300 Msa0856800:intron 35.0%
ATTTGAGAAGACATGGACAT+GGG - chr5_4:51798525-51798544 None:intergenic 35.0%
AATTTGAGAAGACATGGACA+TGG - chr5_4:51798526-51798545 None:intergenic 35.0%
TAATGTGACCCTATATGGTT+GGG + chr5_4:51799144-51799163 Msa0856800:intron 35.0%
AATATAATAGCCACCCTATG+TGG + chr5_4:51799196-51799215 Msa0856800:intron 35.0%
TCATATGACTCATCCACATA+GGG - chr5_4:51799212-51799231 None:intergenic 35.0%
ATCATATGACTCATCCACAT+AGG - chr5_4:51799213-51799232 None:intergenic 35.0%
ATGCATACACTATATACCCT+TGG + chr5_4:51799359-51799378 Msa0856800:intron 35.0%
ATACCCTTGGAAATATCACA+TGG + chr5_4:51799372-51799391 Msa0856800:intron 35.0%
GATTCCATGTGATATTTCCA+AGG - chr5_4:51799379-51799398 None:intergenic 35.0%
AAAAATGTCAGTGAAGAGTG+TGG - chr5_4:51799656-51799675 None:intergenic 35.0%
GCAATCTTAAATTGTTTGGG+AGG - chr5_4:51799767-51799786 None:intergenic 35.0%
ATCCAAGAAAAAAATCCGAG+TGG + chr5_4:51799862-51799881 Msa0856800:intron 35.0%
GCAAAAAATACAAGGGTCAA+AGG + chr5_4:51800010-51800029 Msa0856800:intron 35.0%
! TAATCGAGATTTGAGGTCAA+GGG - chr5_4:51800046-51800065 None:intergenic 35.0%
! ATAATCGAGATTTGAGGTCA+AGG - chr5_4:51800047-51800066 None:intergenic 35.0%
! ATGTTTTCAATCGTGGATAG+CGG - chr5_4:51800092-51800111 None:intergenic 35.0%
! TACAGTTATTGACTGTTTGG+AGG - chr5_4:51800165-51800184 None:intergenic 35.0%
! AGCTACAGTTATTGACTGTT+TGG - chr5_4:51800168-51800187 None:intergenic 35.0%
! TTATGTAGGCACTTTTGCAA+AGG + chr5_4:51800621-51800640 Msa0856800:intron 35.0%
! CTTGATGATTACAAAAGTGC+TGG + chr5_4:51800647-51800666 Msa0856800:CDS 35.0%
GATCTCTAAACTGGATGATT+TGG - chr5_4:51800681-51800700 None:intergenic 35.0%
AATCATCCAGTTTAGAGATC+AGG + chr5_4:51800681-51800700 Msa0856800:CDS 35.0%
!! TCAGCTTTGAATGTGATTTG+TGG - chr5_4:51800737-51800756 None:intergenic 35.0%
ATGTTCAATTATAGCACTGC+AGG + chr5_4:51800832-51800851 Msa0856800:three_prime_UTR 35.0%
GAAAGAATGGAGTAACGTTG+CGG - chr5_4:51792387-51792406 None:intergenic 40.0%
ATGAAAATCTGGAAGGGGTT+GGG - chr5_4:51792422-51792441 None:intergenic 40.0%
AATGAAAATCTGGAAGGGGT+TGG - chr5_4:51792423-51792442 None:intergenic 40.0%
GGGGAAAATGAAAATCTGGA+AGG - chr5_4:51792429-51792448 None:intergenic 40.0%
! GGAGAGAGATGAGATTTTAC+CGG - chr5_4:51792471-51792490 None:intergenic 40.0%
ATTCAAGGAAGAGAAACTCG+AGG + chr5_4:51792580-51792599 Msa0856800:CDS 40.0%
CATTCAATCTCACACTGTTC+AGG + chr5_4:51792668-51792687 Msa0856800:CDS 40.0%
TCGATCCACGATCAAAATTG+TGG - chr5_4:51792883-51792902 None:intergenic 40.0%
AAGTTGCAGAGGAAAAACAG+CGG - chr5_4:51793063-51793082 None:intergenic 40.0%
TGTGTGGTTTGAAAACTGCA+CGG - chr5_4:51793114-51793133 None:intergenic 40.0%
CTATCAACTTGAGAATGAGG+TGG + chr5_4:51793286-51793305 Msa0856800:intron 40.0%
!! TGCAGGGTATCCATCTTTTA+AGG + chr5_4:51793337-51793356 Msa0856800:intron 40.0%
!! GCAGGGTATCCATCTTTTAA+GGG + chr5_4:51793338-51793357 Msa0856800:intron 40.0%
AAAACCTGGCCCTTAAAAGA+TGG - chr5_4:51793350-51793369 None:intergenic 40.0%
! GTTGCTGTCCATTTAAAACC+TGG - chr5_4:51793364-51793383 None:intergenic 40.0%
!! CAACTCTGGGATCTAATTGA+AGG + chr5_4:51793380-51793399 Msa0856800:CDS 40.0%
! ACACACACGCACACAATTTT+CGG - chr5_4:51793538-51793557 None:intergenic 40.0%
CTTGCCCTAATAGCAAAACT+AGG - chr5_4:51794129-51794148 None:intergenic 40.0%
!!! AGTTTTGCTATTAGGGCAAG+TGG + chr5_4:51794129-51794148 Msa0856800:intron 40.0%
AGCTGATATAGCGACAATAG+CGG + chr5_4:51794172-51794191 Msa0856800:intron 40.0%
AGCTGAAGATTCTACATGTG+TGG + chr5_4:51794230-51794249 Msa0856800:intron 40.0%
GCTGAAGATTCTACATGTGT+GGG + chr5_4:51794231-51794250 Msa0856800:intron 40.0%
AAAAATTGGAAGAGTCGGTG+AGG + chr5_4:51794278-51794297 Msa0856800:intron 40.0%
AGACACATGTGATTGCTTAG+TGG + chr5_4:51794352-51794371 Msa0856800:intron 40.0%
GACACATGTGATTGCTTAGT+GGG + chr5_4:51794353-51794372 Msa0856800:intron 40.0%
GCATACAAACAAGAAGGGAA+TGG - chr5_4:51794503-51794522 None:intergenic 40.0%
CACTGTGCATACAAACAAGA+AGG - chr5_4:51794509-51794528 None:intergenic 40.0%
GGTAACCAGTGTCATAATAG+CGG - chr5_4:51794655-51794674 None:intergenic 40.0%
GAAATAGTCTTTCCAGTTGG+TGG + chr5_4:51794726-51794745 Msa0856800:intron 40.0%
TCTCACCATATGTAAGCTTG+GGG - chr5_4:51795005-51795024 None:intergenic 40.0%
!! TGGTGAGATTACTGATTCAC+GGG + chr5_4:51795017-51795036 Msa0856800:intron 40.0%
TATGATCCTACAATCCTACG+AGG - chr5_4:51795209-51795228 None:intergenic 40.0%
TCGTAGGATTGTAGGATCAT+AGG + chr5_4:51795208-51795227 Msa0856800:intron 40.0%
TTGTAGGATCATAGGCTTCA+AGG + chr5_4:51795216-51795235 Msa0856800:intron 40.0%
TGAAATCGTGAGTTACCGTT+GGG + chr5_4:51795291-51795310 Msa0856800:intron 40.0%
!!! TGGGTCAGGTTTTGTTTGAA+TGG + chr5_4:51795354-51795373 Msa0856800:intron 40.0%
AAGGGAAAAAAATTTGGGCC+TGG + chr5_4:51795552-51795571 Msa0856800:intron 40.0%
CACACAAATAAACACACACG+GGG + chr5_4:51795911-51795930 Msa0856800:intron 40.0%
! GGCTGTGAGGACATTTTATA+TGG - chr5_4:51795965-51795984 None:intergenic 40.0%
AAACCACAAGGCTGTAACAA+CGG + chr5_4:51795985-51796004 Msa0856800:intron 40.0%
TCAAACATGAGATCCTGCAT+AGG - chr5_4:51796103-51796122 None:intergenic 40.0%
!! GCTGTTTTCATCCACTATCT+TGG + chr5_4:51796279-51796298 Msa0856800:intron 40.0%
TCAAAAGCTCTCCAAGATAG+TGG - chr5_4:51796293-51796312 None:intergenic 40.0%
!! AGCATTGACACTTAAAGCCT+GGG + chr5_4:51796486-51796505 Msa0856800:intron 40.0%
TACTGGATCACATACTGACA+AGG - chr5_4:51796617-51796636 None:intergenic 40.0%
GTCAGTATGTGATCCAGTAT+TGG + chr5_4:51796618-51796637 Msa0856800:intron 40.0%
TTTCCTTCATCACCCAATAC+TGG - chr5_4:51796634-51796653 None:intergenic 40.0%
CACTTGCAGAAACATCTTTG+TGG - chr5_4:51796711-51796730 None:intergenic 40.0%
TCAGTAACACACATTTCGTC+AGG + chr5_4:51796937-51796956 Msa0856800:intron 40.0%
ATTCTGCTTCAAACTGGTTG+GGG - chr5_4:51796988-51797007 None:intergenic 40.0%
TCTCTTGTACACAAGTTGTG+GGG + chr5_4:51797160-51797179 Msa0856800:intron 40.0%
CGTGCTTCATAGGTTAATTC+TGG - chr5_4:51797355-51797374 None:intergenic 40.0%
AATTTACACATGCACCCAAC+AGG - chr5_4:51797796-51797815 None:intergenic 40.0%
GTTGGGTGCATGTGTAAATT+TGG + chr5_4:51797796-51797815 Msa0856800:intron 40.0%
! TCAGAATAATCTGTGGACTG+TGG - chr5_4:51797946-51797965 None:intergenic 40.0%
CAGACAGAATAGACAGGAAT+CGG - chr5_4:51798091-51798110 None:intergenic 40.0%
TTCCTGTCTATTCTGTCTGT+TGG + chr5_4:51798092-51798111 Msa0856800:intron 40.0%
CTGTGATATGAAACCTTCAG+AGG - chr5_4:51798135-51798154 None:intergenic 40.0%
! CTCTGAAGGTTTCATATCAC+AGG + chr5_4:51798133-51798152 Msa0856800:intron 40.0%
AGGATTCAGTCTGAAGAAGA+TGG + chr5_4:51798153-51798172 Msa0856800:intron 40.0%
TGTAACTCAATTCATGCAGC+TGG + chr5_4:51798186-51798205 Msa0856800:CDS 40.0%
ATTCAGCAAACGAATGCACA+TGG - chr5_4:51798246-51798265 None:intergenic 40.0%
ATCCGATCTTTCTGGATTAC+AGG + chr5_4:51798289-51798308 Msa0856800:intron 40.0%
AGCCTGTAATCCAGAAAGAT+CGG - chr5_4:51798294-51798313 None:intergenic 40.0%
! TTGAATCTGAGGTACACACA+TGG + chr5_4:51798480-51798499 Msa0856800:intron 40.0%
GCTAATGTATGTTCATCCTC+AGG + chr5_4:51798665-51798684 Msa0856800:intron 40.0%
TGGAAGCCATCTAAAGGAAA+AGG + chr5_4:51798731-51798750 Msa0856800:CDS 40.0%
AAGCCATCTAAAGGAAAAGG+TGG + chr5_4:51798734-51798753 Msa0856800:intron 40.0%
AGCCATCTAAAGGAAAAGGT+GGG + chr5_4:51798735-51798754 Msa0856800:intron 40.0%
! ATCCCACCTTTTCCTTTAGA+TGG - chr5_4:51798740-51798759 None:intergenic 40.0%
AAGATTGAGCCCAATCAGTT+TGG - chr5_4:51798983-51799002 None:intergenic 40.0%
ATCTGCCAACCAAATAAGAC+TGG - chr5_4:51799032-51799051 None:intergenic 40.0%
TAATTTGACTCTACGCTAGC+TGG - chr5_4:51799091-51799110 None:intergenic 40.0%
AGCTAGCGTAGAGTCAAATT+AGG + chr5_4:51799090-51799109 Msa0856800:intron 40.0%
GTAATGTGACCCTATATGGT+TGG + chr5_4:51799143-51799162 Msa0856800:intron 40.0%
GAGATGGACATACTCACTTA+GGG + chr5_4:51799273-51799292 Msa0856800:intron 40.0%
ATACTCACTTAGGGAGTTTG+AGG + chr5_4:51799282-51799301 Msa0856800:intron 40.0%
GTCTTCGCTCTAACTACATA+TGG + chr5_4:51799423-51799442 Msa0856800:intron 40.0%
TTCGCTCTAACTACATATGG+TGG + chr5_4:51799426-51799445 Msa0856800:intron 40.0%
TCGCTCTAACTACATATGGT+GGG + chr5_4:51799427-51799446 Msa0856800:intron 40.0%
AACACACATGATAACCATGG+CGG + chr5_4:51799590-51799609 Msa0856800:intron 40.0%
TGGTCTGTTAGTATAGACTG+TGG - chr5_4:51799636-51799655 None:intergenic 40.0%
!!! TGCCACTCGGATTTTTTTCT+TGG - chr5_4:51799867-51799886 None:intergenic 40.0%
! CGTTCATTTGGAGCCATAAA+GGG + chr5_4:51799888-51799907 Msa0856800:intron 40.0%
TGCGCAATAATCGAGATTTG+AGG - chr5_4:51800053-51800072 None:intergenic 40.0%
AAATCTCGATTATTGCGCAG+TGG + chr5_4:51800054-51800073 Msa0856800:intron 40.0%
TCATTCGTTTCAGAAACACC+CGG + chr5_4:51800352-51800371 Msa0856800:intron 40.0%
TCTTCCTCCTTCCAATATTG+TGG + chr5_4:51800479-51800498 Msa0856800:intron 40.0%
GATTCCACAATATTGGAAGG+AGG - chr5_4:51800486-51800505 None:intergenic 40.0%
! TGAATGTGATTTGTGGACTG+CGG - chr5_4:51800730-51800749 None:intergenic 40.0%
! ACGGTGATATGATTTGAAGC+CGG + chr5_4:51800770-51800789 Msa0856800:three_prime_UTR 40.0%
! TGGAGTAACGTTGCGGTTTT+GGG - chr5_4:51792380-51792399 None:intergenic 45.0%
! ATGGAGTAACGTTGCGGTTT+TGG - chr5_4:51792381-51792400 None:intergenic 45.0%
AGAGCTAAGGAAAGAATCGG+AGG - chr5_4:51792621-51792640 None:intergenic 45.0%
GGGAGAGCTAAGGAAAGAAT+CGG - chr5_4:51792624-51792643 None:intergenic 45.0%
TTGAATGCTGAGTACTCGAC+CGG - chr5_4:51792655-51792674 None:intergenic 45.0%
TCATAGCCCAAAAGTTGCAG+AGG - chr5_4:51793074-51793093 None:intergenic 45.0%
! GTGCAGTTTTCAAACCACAC+AGG + chr5_4:51793113-51793132 Msa0856800:intron 45.0%
!! GTATCCATCTTTTAAGGGCC+AGG + chr5_4:51793343-51793362 Msa0856800:intron 45.0%
!! GGTGTTGCGGTTTTTATAGC+AGG - chr5_4:51793683-51793702 None:intergenic 45.0%
!! CATTGACAACAGAGGTGTTG+CGG - chr5_4:51793696-51793715 None:intergenic 45.0%
CAACACCTCTGTTGTCAATG+CGG + chr5_4:51793696-51793715 Msa0856800:intron 45.0%
ACTACTTATAGGTCCCGCTT+TGG + chr5_4:51793967-51793986 Msa0856800:intron 45.0%
TTGCGCACTGTTGTCAATAG+CGG - chr5_4:51794100-51794119 None:intergenic 45.0%
AGTGTCATAATAGCGGCTTG+CGG - chr5_4:51794648-51794667 None:intergenic 45.0%
TCTAATAGTGGCCAAGTGTG+TGG - chr5_4:51794800-51794819 None:intergenic 45.0%
!! GAGATTACTGATTCACGGGT+TGG + chr5_4:51795021-51795040 Msa0856800:intron 45.0%
GATCATAGGCTTCAAGGTCA+TGG + chr5_4:51795222-51795241 Msa0856800:intron 45.0%
AACTCACGATTTCAGCACAG+TGG - chr5_4:51795285-51795304 None:intergenic 45.0%
CTGAAATCGTGAGTTACCGT+TGG + chr5_4:51795290-51795309 Msa0856800:intron 45.0%
GAAATCGTGAGTTACCGTTG+GGG + chr5_4:51795292-51795311 Msa0856800:intron 45.0%
!!! CGAGTTTTTTGATCTGGGTC+AGG + chr5_4:51795340-51795359 Msa0856800:intron 45.0%
ACAGTGTAAGGAGAGTTCAG+TGG + chr5_4:51795485-51795504 Msa0856800:intron 45.0%
CAAGCTGTACTGGGTAAAAG+GGG - chr5_4:51795520-51795539 None:intergenic 45.0%
CCAAGCTGTACTGGGTAAAA+GGG - chr5_4:51795521-51795540 None:intergenic 45.0%
! CCTTTTACCCAGTACAGCTT+GGG + chr5_4:51795519-51795538 Msa0856800:intron 45.0%
ACAAATAAACACACACGGGG+AGG + chr5_4:51795914-51795933 Msa0856800:intron 45.0%
CAAATAAACACACACGGGGA+GGG + chr5_4:51795915-51795934 Msa0856800:intron 45.0%
AAATAAACACACACGGGGAG+GGG + chr5_4:51795916-51795935 Msa0856800:intron 45.0%
! GTTGTTACAGCCTTGTGGTT+TGG - chr5_4:51795986-51796005 None:intergenic 45.0%
AACCACAAGGCTGTAACAAC+GGG + chr5_4:51795986-51796005 Msa0856800:intron 45.0%
GGGGGTGAAATAGCATAACT+TGG - chr5_4:51796073-51796092 None:intergenic 45.0%
ATGAGATCCTGCATAGGATC+AGG - chr5_4:51796097-51796116 None:intergenic 45.0%
! TTGGCTTGAACTGAACCATC+AGG + chr5_4:51796128-51796147 Msa0856800:intron 45.0%
TGGCTTGAACTGAACCATCA+GGG + chr5_4:51796129-51796148 Msa0856800:intron 45.0%
TTATTCAAACAGGGCCCTGA+TGG - chr5_4:51796146-51796165 None:intergenic 45.0%
!! CAGCATTGACACTTAAAGCC+TGG + chr5_4:51796485-51796504 Msa0856800:intron 45.0%
! GCATTGACACTTAAAGCCTG+GGG + chr5_4:51796487-51796506 Msa0856800:intron 45.0%
! GATCCAGTATTGGGTGATGA+AGG + chr5_4:51796628-51796647 Msa0856800:CDS 45.0%
GCTTTATGTTCCACAAGAGC+TGG + chr5_4:51796654-51796673 Msa0856800:CDS 45.0%
TTCTGCTTCAAACTGGTTGG+GGG - chr5_4:51796987-51797006 None:intergenic 45.0%
CAGAATTACTGACAGGACTC+AGG + chr5_4:51797002-51797021 Msa0856800:CDS 45.0%
ATTCCTACGAAGCACGGATA+CGG - chr5_4:51797521-51797540 None:intergenic 45.0%
GTCCAACAGACAGAATAGAC+AGG - chr5_4:51798097-51798116 None:intergenic 45.0%
CCTTCAGAGGGAATACATAG+TGG - chr5_4:51798122-51798141 None:intergenic 45.0%
CCACTATGTATTCCCTCTGA+AGG + chr5_4:51798119-51798138 Msa0856800:intron 45.0%
GACGAGTTCATCGTGACATT+AGG - chr5_4:51798599-51798618 None:intergenic 45.0%
GATGGGAATCTTCTCCTCAT+TGG + chr5_4:51798711-51798730 Msa0856800:CDS 45.0%
CCTTTAGATGGCTTCCAATG+AGG - chr5_4:51798728-51798747 None:intergenic 45.0%
CCTCATTGGAAGCCATCTAA+AGG + chr5_4:51798725-51798744 Msa0856800:CDS 45.0%
TGACCAAAAAATGGGGGAAC+CGG + chr5_4:51799006-51799025 Msa0856800:intron 45.0%
TATGACTCATCCACATAGGG+TGG - chr5_4:51799209-51799228 None:intergenic 45.0%
TGACTAATAATAGCCGGTGC+AGG + chr5_4:51799248-51799267 Msa0856800:intron 45.0%
GGAGATGGACATACTCACTT+AGG + chr5_4:51799272-51799291 Msa0856800:intron 45.0%
ATACTTCAGTGTTTCCGCCA+TGG - chr5_4:51799607-51799626 None:intergenic 45.0%
AGGATTTCCCTGCACACAAA+AGG - chr5_4:51799747-51799766 None:intergenic 45.0%
! GCGTTCATTTGGAGCCATAA+AGG + chr5_4:51799887-51799906 Msa0856800:intron 45.0%
CACACAGACATTGCTTCAAG+TGG - chr5_4:51799922-51799941 None:intergenic 45.0%
CACTTGAAGCAATGTCTGTG+TGG + chr5_4:51799920-51799939 Msa0856800:intron 45.0%
! AAAGGCACACACTGATGAGT+AGG - chr5_4:51799961-51799980 None:intergenic 45.0%
! TTTTAATGCTGGCAGGGAAC+AGG + chr5_4:51800204-51800223 Msa0856800:intron 45.0%
TTGATCAAGACACAGGCATC+CGG - chr5_4:51800792-51800811 None:intergenic 45.0%
!! TTATTATTATTATAATAGTA+AGG + chr5_4:51795757-51795776 Msa0856800:intron 5.0%
!!! TAGATATTTTTTTTTATAAT+AGG + chr5_4:51796019-51796038 Msa0856800:intron 5.0%
!! AAAAAATAAATAAAGAATAT+CGG + chr5_4:51800920-51800939 Msa0856800:three_prime_UTR 5.0%
!!! AACGTTGCGGTTTTGGGTAG+AGG - chr5_4:51792374-51792393 None:intergenic 50.0%
! TTAGCTCTCCCTTCCGAAAC+CGG + chr5_4:51792633-51792652 Msa0856800:CDS 50.0%
! GTTGACTTCACGAATCGCGA+GGG - chr5_4:51793516-51793535 None:intergenic 50.0%
! GCATTCCGCATTGACAACAG+AGG - chr5_4:51793704-51793723 None:intergenic 50.0%
ACTGCCGCCAACCCAATAAT+TGG + chr5_4:51793729-51793748 Msa0856800:intron 50.0%
AAGTGGAAAGCAGCCAAAGC+GGG - chr5_4:51793983-51794002 None:intergenic 50.0%
GAAGTGGAAAGCAGCCAAAG+CGG - chr5_4:51793984-51794003 None:intergenic 50.0%
AAAATCAGGACAACCGCACC+AGG - chr5_4:51794045-51794064 None:intergenic 50.0%
ATGGAGCAAAGCTGAACTCG+TGG - chr5_4:51794319-51794338 None:intergenic 50.0%
GCAAGCCGCTATTATGACAC+TGG + chr5_4:51794647-51794666 Msa0856800:intron 50.0%
!! GTCTTTCCAGTTGGTGGGTA+AGG + chr5_4:51794732-51794751 Msa0856800:intron 50.0%
GGGGTTTATTGAGCGAAGCT+TGG - chr5_4:51794986-51795005 None:intergenic 50.0%
GATCCTACAATCCTACGAGG+AGG - chr5_4:51795206-51795225 None:intergenic 50.0%
CTTCATGCACACAACCCCAA+CGG - chr5_4:51795309-51795328 None:intergenic 50.0%
GTGTAAGGAGAGTTCAGTGG+TGG + chr5_4:51795488-51795507 Msa0856800:intron 50.0%
! CCCTTTTACCCAGTACAGCT+TGG + chr5_4:51795518-51795537 Msa0856800:intron 50.0%
CCCAAGCTGTACTGGGTAAA+AGG - chr5_4:51795522-51795541 None:intergenic 50.0%
ACCACAAGGCTGTAACAACG+GGG + chr5_4:51795987-51796006 Msa0856800:intron 50.0%
ATCCTGCATAGGATCAGGAG+GGG - chr5_4:51796092-51796111 None:intergenic 50.0%
GATCCTGCATAGGATCAGGA+GGG - chr5_4:51796093-51796112 None:intergenic 50.0%
AGATCCTGCATAGGATCAGG+AGG - chr5_4:51796094-51796113 None:intergenic 50.0%
ACTGGATTTGGGGGTCTGTT+TGG - chr5_4:51796421-51796440 None:intergenic 50.0%
TACACTGTCACCAGCTCTTG+TGG - chr5_4:51796667-51796686 None:intergenic 50.0%
GGATCAGTCTTACCCTCTCA+CGG - chr5_4:51796690-51796709 None:intergenic 50.0%
GGGGTCAACATTGAAGCGAT+TGG - chr5_4:51796968-51796987 None:intergenic 50.0%
TATGAAGCACGGACACTCCT+CGG + chr5_4:51797364-51797383 Msa0856800:intron 50.0%
CGGAAAATCACAGCCGTAAG+AGG - chr5_4:51798071-51798090 None:intergenic 50.0%
TCATGCAGCTGGACCTTCAA+AGG + chr5_4:51798197-51798216 Msa0856800:CDS 50.0%
!! ACCGGCCAGTCTTATTTGGT+TGG + chr5_4:51799024-51799043 Msa0856800:intron 50.0%
GCCAACCAAATAAGACTGGC+CGG - chr5_4:51799028-51799047 None:intergenic 50.0%
TGACTCTACGCTAGCTGGTT+TGG - chr5_4:51799086-51799105 None:intergenic 50.0%
CTAATAATAGCCGGTGCAGG+TGG + chr5_4:51799251-51799270 Msa0856800:intron 50.0%
ACTTAGGGAGTTTGAGGAGC+AGG + chr5_4:51799288-51799307 Msa0856800:intron 50.0%
TCCAAATGAACGCTGCCACT+CGG - chr5_4:51799880-51799899 None:intergenic 50.0%
CTCATGACCGCACTTCTTCT+CGG + chr5_4:51800231-51800250 Msa0856800:CDS 50.0%
! GTGGACTGCGGATATCATCT+TGG - chr5_4:51800718-51800737 None:intergenic 50.0%
GGTTTCGGAAGGGAGAGCTA+AGG - chr5_4:51792634-51792653 None:intergenic 55.0%
! GTACTCGACCGGTTTCGGAA+GGG - chr5_4:51792644-51792663 None:intergenic 55.0%
! AGTACTCGACCGGTTTCGGA+AGG - chr5_4:51792645-51792664 None:intergenic 55.0%
! GCTGAGTACTCGACCGGTTT+CGG - chr5_4:51792649-51792668 None:intergenic 55.0%
TGCTTGCTTGCTTGCCTGTG+TGG - chr5_4:51793130-51793149 None:intergenic 55.0%
! GGTTGACTTCACGAATCGCG+AGG - chr5_4:51793517-51793536 None:intergenic 55.0%
!! CGCGCCAATTATTGGGTTGG+CGG - chr5_4:51793736-51793755 None:intergenic 55.0%
CGCCAACCCAATAATTGGCG+CGG + chr5_4:51793734-51793753 Msa0856800:intron 55.0%
CACCGCGCCAATTATTGGGT+TGG - chr5_4:51793739-51793758 None:intergenic 55.0%
ACCCAATAATTGGCGCGGTG+CGG + chr5_4:51793739-51793758 Msa0856800:intron 55.0%
!! CATAGCGGGCGCTATTTCAG+TGG + chr5_4:51793772-51793791 Msa0856800:intron 55.0%
CGGAGCAGAGCGGAAAAATC+AGG - chr5_4:51794059-51794078 None:intergenic 55.0%
ACACAGCCTTACCCACCAAC+TGG - chr5_4:51794741-51794760 None:intergenic 55.0%
GAGCCTCCTCGTAGGATTGT+AGG + chr5_4:51795200-51795219 Msa0856800:intron 55.0%
TCATGGTTCCGTGCTGCGAT+GGG + chr5_4:51795239-51795258 Msa0856800:intron 55.0%
AGGGAAGAGAGAGTCGCAGA+TGG - chr5_4:51795435-51795454 None:intergenic 55.0%
GTCCTCACAGCCAAACCACA+AGG + chr5_4:51795973-51795992 Msa0856800:intron 55.0%
! AGCCTTGTGGTTTGGCTGTG+AGG - chr5_4:51795978-51795997 None:intergenic 55.0%
TCCCCGTTGTTACAGCCTTG+TGG - chr5_4:51795991-51796010 None:intergenic 55.0%
TCCTGCATAGGATCAGGAGG+GGG - chr5_4:51796091-51796110 None:intergenic 55.0%
TGGTGACAGTGTACCGTGAG+AGG + chr5_4:51796674-51796693 Msa0856800:CDS 55.0%
GGTGACAGTGTACCGTGAGA+GGG + chr5_4:51796675-51796694 Msa0856800:CDS 55.0%
!! GAGGAGTGTCCGTGCTTCAT+AGG - chr5_4:51797365-51797384 None:intergenic 55.0%
! TCCTCGGATTAGGCGTGTCT+CGG + chr5_4:51797380-51797399 Msa0856800:intron 55.0%
ACGAAGCACGGATACGGACA+CGG - chr5_4:51797515-51797534 None:intergenic 55.0%
TGTCCGTATCCGTGCTTCGT+AGG + chr5_4:51797515-51797534 Msa0856800:intron 55.0%
!!! TGGCCGGTTCCCCCATTTTT+TGG - chr5_4:51799012-51799031 None:intergenic 55.0%
!! GGGAACCGGCCAGTCTTATT+TGG + chr5_4:51799020-51799039 Msa0856800:intron 55.0%
ATGTCCATCTCCACCTGCAC+CGG - chr5_4:51799264-51799283 None:intergenic 55.0%
TCCGAGTGGCAGCGTTCATT+TGG + chr5_4:51799876-51799895 Msa0856800:intron 55.0%
TGACCGCACTTCTTCTCGGT+TGG + chr5_4:51800235-51800254 Msa0856800:CDS 55.0%
GCTCCAACCGAGAAGAAGTG+CGG - chr5_4:51800241-51800260 None:intergenic 55.0%
ACACCCGGACAACCTTGAGA+AGG + chr5_4:51800367-51800386 Msa0856800:CDS 55.0%
CAGCCTTCTCAAGGTTGTCC+GGG - chr5_4:51800373-51800392 None:intergenic 55.0%
GCAGCCTTCTCAAGGTTGTC+CGG - chr5_4:51800374-51800393 None:intergenic 55.0%
CGAGTTCTGCAGCCTTCTCA+AGG - chr5_4:51800382-51800401 None:intergenic 55.0%
TGAGAAGGCTGCAGAACTCG+CGG + chr5_4:51800382-51800401 Msa0856800:CDS 55.0%
ACTCGCGGTATCAAGCGTAC+AGG + chr5_4:51800397-51800416 Msa0856800:CDS 55.0%
GCGTGTGCGCGAATCTAGCT+TGG - chr5_4:51792492-51792511 None:intergenic 60.0%
CCCGCACCGCGCCAATTATT+GGG - chr5_4:51793743-51793762 None:intergenic 60.0%
CCCAATAATTGGCGCGGTGC+GGG + chr5_4:51793740-51793759 Msa0856800:intron 60.0%
TCCCGCACCGCGCCAATTAT+TGG - chr5_4:51793744-51793763 None:intergenic 60.0%
! CGGGCGCTATTTCAGTGGTG+CGG + chr5_4:51793777-51793796 Msa0856800:intron 60.0%
! GTGTCGGCACGTGTCAGAAG+TGG - chr5_4:51794000-51794019 None:intergenic 60.0%
TCCGCTCTGCTCCGCTATAG+CGG + chr5_4:51794065-51794084 Msa0856800:intron 60.0%
TACCTTCCCCAGACACCACC+TGG + chr5_4:51794766-51794785 Msa0856800:intron 60.0%
TTCCCCAGACACCACCTGGT+GGG + chr5_4:51794770-51794789 Msa0856800:intron 60.0%
GCTCGCGGTCTTGACTACAC+TGG - chr5_4:51795184-51795203 None:intergenic 60.0%
CAATCCTACGAGGAGGCTCG+CGG - chr5_4:51795199-51795218 None:intergenic 60.0%
GTCATGGTTCCGTGCTGCGA+TGG + chr5_4:51795238-51795257 Msa0856800:intron 60.0%
ATCCTGGTCCCATCGCAGCA+CGG - chr5_4:51795250-51795269 None:intergenic 60.0%
TGCGATGGGACCAGGATCAC+TGG + chr5_4:51795253-51795272 Msa0856800:intron 60.0%
GTGGTGCACTCCAGTGATCC+TGG - chr5_4:51795266-51795285 None:intergenic 60.0%
! TCGCAGATGGTGACGCAAGG+AGG - chr5_4:51795422-51795441 None:intergenic 60.0%
! GAGTCGCAGATGGTGACGCA+AGG - chr5_4:51795425-51795444 None:intergenic 60.0%
! GGGGAAGTGTGGAGTCGGAA+CGG + chr5_4:51795935-51795954 Msa0856800:intron 60.0%
! GGGAAGTGTGGAGTCGGAAC+GGG + chr5_4:51795936-51795955 Msa0856800:intron 60.0%
ACCCCCTCCTGATCCTATGC+AGG + chr5_4:51796087-51796106 Msa0856800:intron 60.0%
GCACGGACACTCCTCGGATT+AGG + chr5_4:51797370-51797389 Msa0856800:intron 60.0%
ACCGAGACACGCCTAATCCG+AGG - chr5_4:51797384-51797403 None:intergenic 60.0%
!! GTGTCGGTGTCGTGTCGTGT+CGG - chr5_4:51797413-51797432 None:intergenic 60.0%
CACGGACACTGGACACGACA+CGG - chr5_4:51797497-51797516 None:intergenic 60.0%
ACGGATACGGACACGGACAC+TGG - chr5_4:51797508-51797527 None:intergenic 60.0%
GGTACACACATGGCAGCACC+AGG + chr5_4:51798490-51798509 Msa0856800:intron 60.0%
ACACACATGGCAGCACCAGG+AGG + chr5_4:51798493-51798512 Msa0856800:intron 60.0%
GGACATGGGTCAACTCCTCC+TGG - chr5_4:51798511-51798530 None:intergenic 60.0%
ATAGCCGGTGCAGGTGGAGA+TGG + chr5_4:51799257-51799276 Msa0856800:intron 60.0%
TAATTGGCGCGGTGCGGGAG+CGG + chr5_4:51793745-51793764 Msa0856800:intron 65.0%
GGGCGGTTGTCAGGCTGTGT+CGG - chr5_4:51794016-51794035 None:intergenic 65.0%
ACAACCGCACCAGGCCACGT+GGG - chr5_4:51794036-51794055 None:intergenic 65.0%
! GCCGCTATAGCGGAGCAGAG+CGG - chr5_4:51794069-51794088 None:intergenic 65.0%
CTCTGCTCCGCTATAGCGGC+CGG + chr5_4:51794069-51794088 Msa0856800:intron 65.0%
GTTGTCAATAGCGGCCGCGC+CGG - chr5_4:51794091-51794110 None:intergenic 65.0%
CACCAGGTGGTGTCTGGGGA+AGG - chr5_4:51794771-51794790 None:intergenic 65.0%
CTTCCCCAGACACCACCTGG+TGG + chr5_4:51794769-51794788 Msa0856800:intron 65.0%
CTCCCACCAGGTGGTGTCTG+GGG - chr5_4:51794775-51794794 None:intergenic 65.0%
GCTCCCACCAGGTGGTGTCT+GGG - chr5_4:51794776-51794795 None:intergenic 65.0%
AAGTGTGTGGCGCTCCCACC+AGG - chr5_4:51794787-51794806 None:intergenic 65.0%
!! TGGTGGGAGCGCCACACACT+TGG + chr5_4:51794786-51794805 Msa0856800:intron 65.0%
AAGACCGCGAGCCTCCTCGT+AGG + chr5_4:51795192-51795211 Msa0856800:intron 65.0%
TTCCGTGCTGCGATGGGACC+AGG + chr5_4:51795245-51795264 Msa0856800:intron 65.0%
ACACACGGGGAGGGGAAGTG+TGG + chr5_4:51795924-51795943 Msa0856800:intron 65.0%
! GGGGAGGGGAAGTGTGGAGT+CGG + chr5_4:51795930-51795949 Msa0856800:intron 65.0%
AATTGGCGCGGTGCGGGAGC+GGG + chr5_4:51793746-51793765 Msa0856800:intron 70.0%
TGCGGGAGCGGGTCGCATAG+CGG + chr5_4:51793757-51793776 Msa0856800:intron 70.0%
CAGCCTGACAACCGCCCACG+TGG + chr5_4:51794019-51794038 Msa0856800:intron 70.0%
AGGCCACGTGGGCGGTTGTC+AGG - chr5_4:51794025-51794044 None:intergenic 70.0%
TGACAACCGCCCACGTGGCC+TGG + chr5_4:51794024-51794043 Msa0856800:intron 70.0%
GACAACCGCACCAGGCCACG+TGG - chr5_4:51794037-51794056 None:intergenic 70.0%
CGCTCCCACCAGGTGGTGTC+TGG - chr5_4:51794777-51794796 None:intergenic 70.0%
TGTGTGGCGCTCCCACCAGG+TGG - chr5_4:51794784-51794803 None:intergenic 70.0%
GCGGGAGCGGGTCGCATAGC+GGG + chr5_4:51793758-51793777 Msa0856800:intron 75.0%
ACCGCCCACGTGGCCTGGTG+CGG + chr5_4:51794029-51794048 Msa0856800:intron 75.0%
ACCGCACCAGGCCACGTGGG+CGG - chr5_4:51794033-51794052 None:intergenic 75.0%
CTCCGCTATAGCGGCCGGCG+CGG + chr5_4:51794074-51794093 Msa0856800:intron 75.0%
!! GGCCGCGCCGGCCGCTATAG+CGG - chr5_4:51794079-51794098 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 51792218 51801038 51792218 ID=Msa0856800;Name=Msa0856800
chr5_4 mRNA 51792218 51801038 51792218 ID=Msa0856800-mRNA-1;Parent=Msa0856800;Name=Msa0856800-mRNA-1;_AED=0.16;_eAED=0.16;_QI=138|0.91|0.84|1|0.83|0.69|13|269|344
chr5_4 exon 51792218 51792470 51792218 ID=Msa0856800-mRNA-1:exon:16153;Parent=Msa0856800-mRNA-1
chr5_4 exon 51792580 51792689 51792580 ID=Msa0856800-mRNA-1:exon:16154;Parent=Msa0856800-mRNA-1
chr5_4 exon 51793041 51793112 51793041 ID=Msa0856800-mRNA-1:exon:16155;Parent=Msa0856800-mRNA-1
chr5_4 exon 51793359 51793446 51793359 ID=Msa0856800-mRNA-1:exon:16156;Parent=Msa0856800-mRNA-1
chr5_4 exon 51794935 51795018 51794935 ID=Msa0856800-mRNA-1:exon:16157;Parent=Msa0856800-mRNA-1
chr5_4 exon 51796623 51796696 51796623 ID=Msa0856800-mRNA-1:exon:16158;Parent=Msa0856800-mRNA-1
chr5_4 exon 51796959 51797023 51796959 ID=Msa0856800-mRNA-1:exon:16159;Parent=Msa0856800-mRNA-1
chr5_4 exon 51798155 51798218 51798155 ID=Msa0856800-mRNA-1:exon:16160;Parent=Msa0856800-mRNA-1
chr5_4 exon 51798687 51798752 51798687 ID=Msa0856800-mRNA-1:exon:16161;Parent=Msa0856800-mRNA-1
chr5_4 exon 51799758 51799814 51799758 ID=Msa0856800-mRNA-1:exon:16162;Parent=Msa0856800-mRNA-1
chr5_4 exon 51800219 51800263 51800219 ID=Msa0856800-mRNA-1:exon:16163;Parent=Msa0856800-mRNA-1
chr5_4 exon 51800365 51800418 51800365 ID=Msa0856800-mRNA-1:exon:16164;Parent=Msa0856800-mRNA-1
chr5_4 exon 51800629 51801038 51800629 ID=Msa0856800-mRNA-1:exon:16165;Parent=Msa0856800-mRNA-1
chr5_4 five_prime_UTR 51792218 51792355 51792218 ID=Msa0856800-mRNA-1:five_prime_utr;Parent=Msa0856800-mRNA-1
chr5_4 CDS 51792356 51792470 51792356 ID=Msa0856800-mRNA-1:cds;Parent=Msa0856800-mRNA-1
chr5_4 CDS 51792580 51792689 51792580 ID=Msa0856800-mRNA-1:cds;Parent=Msa0856800-mRNA-1
chr5_4 CDS 51793041 51793112 51793041 ID=Msa0856800-mRNA-1:cds;Parent=Msa0856800-mRNA-1
chr5_4 CDS 51793359 51793446 51793359 ID=Msa0856800-mRNA-1:cds;Parent=Msa0856800-mRNA-1
chr5_4 CDS 51794935 51795018 51794935 ID=Msa0856800-mRNA-1:cds;Parent=Msa0856800-mRNA-1
chr5_4 CDS 51796623 51796696 51796623 ID=Msa0856800-mRNA-1:cds;Parent=Msa0856800-mRNA-1
chr5_4 CDS 51796959 51797023 51796959 ID=Msa0856800-mRNA-1:cds;Parent=Msa0856800-mRNA-1
chr5_4 CDS 51798155 51798218 51798155 ID=Msa0856800-mRNA-1:cds;Parent=Msa0856800-mRNA-1
chr5_4 CDS 51798687 51798752 51798687 ID=Msa0856800-mRNA-1:cds;Parent=Msa0856800-mRNA-1
chr5_4 CDS 51799758 51799814 51799758 ID=Msa0856800-mRNA-1:cds;Parent=Msa0856800-mRNA-1
chr5_4 CDS 51800219 51800263 51800219 ID=Msa0856800-mRNA-1:cds;Parent=Msa0856800-mRNA-1
chr5_4 CDS 51800365 51800418 51800365 ID=Msa0856800-mRNA-1:cds;Parent=Msa0856800-mRNA-1
chr5_4 CDS 51800629 51800769 51800629 ID=Msa0856800-mRNA-1:cds;Parent=Msa0856800-mRNA-1
chr5_4 three_prime_UTR 51800770 51801038 51800770 ID=Msa0856800-mRNA-1:three_prime_utr;Parent=Msa0856800-mRNA-1
Gene Sequence

>Msa0856800

ATGATTCATCATCTACCTCTACCCAAAACCGCAACGTTACTCCATTCTTTCTACACACTCAATCCCAACCCCTTCCAGATTTTCATTTTCCCCAGAAGAAACTCATTATTTTCCGATTCAAGGAAGAGAAACTCGAGGAATTCATCAATGGCGCCTCCGATTCTTTCCTTAGCTCTCCCTTCCGAAACCGGTCGAGTACTCAGCATTCAATCTCACACTGTTCAGGGTTATGTTGGAAATAAATCCGCTGTTTTTCCTCTGCAACTTTTGGGCTATGATGTCGATCCAATTAATTCCGGCCAGGTTTTAAATGGACAGCAACTCTGGGATCTAATTGAAGGCCTTGAAGCCAATGATTTATTGTACTATACTCACTTATTAACAGGTTATATTGGTTCAGTTTCTTTTCTCAACACAGTATTGGATGTTGTCTCCAAGCTTCGCTCAATAAACCCCAAGCTTACATATGTATGTGATCCAGTATTGGGTGATGAAGGAAAGCTTTATGTTCCACAAGAGCTGGTGACAGTGTACCGTGAGAGGGTTGTTCCAATCGCTTCAATGTTGACCCCCAACCAGTTTGAAGCAGAATTACTGACAGGACTCAGGATTCAGTCTGAAGAAGATGGCCGAGAAGCTTGTAACTCAATTCATGCAGCTGGACCTTCAAAGGTTGTAATTACAAGTATAAATGTAGATGGGAATCTTCTCCTCATTGGAAGCCATCTAAAGGAAAAGGGAAATCCTCCCAAACAATTTAAGATTGCAATTCCCAAAATACCAGCTTATTTTACGGGAACAGGAGATCTCATGACCGCACTTCTTCTCGGTTGGAGCAATAAACACCCGGACAACCTTGAGAAGGCTGCAGAACTCGCGGTATCAAGCGTACAGGCACTTTTGCAAAGGACACTTGATGATTACAAAAGTGCTGGACATGATCCCAAATCATCCAGTTTAGAGATCAGGTTAATTCAGAGCCAAGATGATATCCGCAGTCCACAAATCACATTCAAAGCTGAAATATACAGCTAA

Protein sequence

>Msa0856800

MIHHLPLPKTATLLHSFYTLNPNPFQIFIFPRRNSLFSDSRKRNSRNSSMAPPILSLALPSETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPINSGQVLNGQQLWDLIEGLEANDLLYYTHLLTGYIGSVSFLNTVLDVVSKLRSINPKLTYVCDPVLGDEGKLYVPQELVTVYRERVVPIASMLTPNQFEAELLTGLRIQSEEDGREACNSIHAAGPSKVVITSINVDGNLLLIGSHLKEKGNPPKQFKIAIPKIPAYFTGTGDLMTALLLGWSNKHPDNLEKAAELAVSSVQALLQRTLDDYKSAGHDPKSSSLEIRLIQSQDDIRSPQITFKAEIYS*