AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0779130


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0779130 MtrunA17_Chr5g0435151 98.291 351 3 1 4 354 3 350 0.0 698
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0779130 AT5G37850.4 84.314 306 48 0 49 354 4 309 0.0 536
Msa0779130 AT5G37850.2 84.314 306 48 0 49 354 4 309 0.0 536
Msa0779130 AT5G37850.1 84.314 306 48 0 49 354 38 343 0.0 535
Msa0779130 AT5G37850.3 77.451 306 41 1 49 354 38 315 3.47e-169 474

Find 105 sgRNAs with CRISPR-Local

Find 582 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTAAAATAAGCTGGTATTT+TGG 0.109128 5_2:-60305618 None:intergenic
TGTCGATCAATTATAGAAAT+TGG 0.174885 5_2:+60306621 Msa0779130:three_prime_UTR
GAAAACTGCACGGAATTAAT+TGG 0.219716 5_2:-60298941 None:intergenic
GGAAAATAATGAGTTTCTTC+TGG 0.232534 5_2:-60298270 None:intergenic
ATGGAGTAACGTTGCGGTTT+TGG 0.233733 5_2:-60298201 None:intergenic
AATTGCAATCTTAAATTGTT+TGG 0.234230 5_2:-60305594 None:intergenic
GATCTCTAAACTGGATGATT+TGG 0.234798 5_2:-60306499 None:intergenic
ACACTCATTACTGGAATATT+AGG 0.252935 5_2:+60306785 Msa0779130:three_prime_UTR
GCTGAGTACTCGACCGGTTT+CGG 0.286157 5_2:-60298460 None:intergenic
AGTTTCATTACACTCATTAC+TGG 0.305689 5_2:+60306776 Msa0779130:three_prime_UTR
TTCTGGGGAAAATGAAAATC+TGG 0.310927 5_2:-60298253 None:intergenic
TACTATACTCACTTATTAAC+AGG 0.313318 5_2:+60299265 Msa0779130:CDS
CATTCAATCTCACACTGTTC+AGG 0.316627 5_2:+60298482 Msa0779130:CDS
ATTACAAGTATAAATGTAGA+TGG 0.322665 5_2:+60304363 Msa0779130:CDS
ATTGCAATCTTAAATTGTTT+GGG 0.334187 5_2:-60305593 None:intergenic
AATTAACCTGATCTCTAAAC+TGG 0.348609 5_2:-60306508 None:intergenic
TTAGCTCTTCCTTCCGAAAC+CGG 0.355315 5_2:+60298447 Msa0779130:CDS
CTCATGACCGCACTTCTTCT+CGG 0.358402 5_2:+60306053 Msa0779130:CDS
ATCTCACCATATGTAAGCTT+GGG 0.360323 5_2:-60300842 None:intergenic
ACAATAAATCATTGGCTTCA+AGG 0.365121 5_2:-60299243 None:intergenic
TTTCCTTCATCACCCAATAC+TGG 0.366568 5_2:-60302474 None:intergenic
GAAAATAATGAGTTTCTTCT+GGG 0.368587 5_2:-60298269 None:intergenic
AATTCTGCTTCAAACTGGTT+GGG 0.370817 5_2:-60302829 None:intergenic
GCAGCCTTCTCAAGGTTGTC+CGG 0.375285 5_2:-60306193 None:intergenic
ATGAAAATCTGGAAGGGGTT+GGG 0.395070 5_2:-60298242 None:intergenic
ATCTCTAAACTGGATGATTT+GGG 0.402474 5_2:-60306498 None:intergenic
AATTGATCGACAAAGGCATT+TGG 0.413129 5_2:-60306610 None:intergenic
TATTTGTAGCAAACCTTTGA+AGG 0.414189 5_2:-60303880 None:intergenic
ATATAAGTCAAATTTGTGTT+AGG 0.418090 5_2:+60306710 Msa0779130:three_prime_UTR
GATGGGAATCTTCTCCTCAT+TGG 0.430577 5_2:+60304381 Msa0779130:CDS
GAATTGAGTTACAAGCTTCT+CGG 0.437898 5_2:-60303846 None:intergenic
AATCATCCAGTTTAGAGATC+AGG 0.438326 5_2:+60306502 Msa0779130:CDS
TCAGTAATTCTGCTTCAAAC+TGG 0.439746 5_2:-60302834 None:intergenic
AAAACCTGGCCCTTAAAAGA+TGG 0.449977 5_2:-60299187 None:intergenic
GGGTTATGTTGGAAATAAAT+CGG 0.455433 5_2:+60298880 Msa0779130:intron
ATTCTGCTTCAAACTGGTTG+GGG 0.465962 5_2:-60302828 None:intergenic
CATCTTATATCATGAACAAA+AGG 0.471751 5_2:+60298059 Msa0779130:five_prime_UTR
TAATTCTGCTTCAAACTGGT+TGG 0.476012 5_2:-60302830 None:intergenic
TCAGCTTTGAATGTGATTTG+TGG 0.476834 5_2:-60306555 None:intergenic
AATCTCACCATATGTAAGCT+TGG 0.477830 5_2:-60300843 None:intergenic
TGACCGCACTTCTTCTCGGT+TGG 0.480032 5_2:+60306057 Msa0779130:CDS
CAGCCTTCTCAAGGTTGTCC+GGG 0.480511 5_2:-60306192 None:intergenic
ATAAACCCCAAGCTTACATA+TGG 0.480838 5_2:+60300836 Msa0779130:CDS
GTCAGTATGTGATCCAGTAT+TGG 0.485806 5_2:+60302461 Msa0779130:intron
AATGAAAATCTGGAAGGGGT+TGG 0.487190 5_2:-60298243 None:intergenic
AGCTGAAATATACAGCTAAA+CGG 0.487483 5_2:+60306572 Msa0779130:exon
TCAGTATGTGATCCAGTATT+GGG 0.487775 5_2:+60302462 Msa0779130:intron
GTGGACTGCGGATATCATCT+TGG 0.488939 5_2:-60306536 None:intergenic
TCATGCAGCTGGACCTTCAA+AGG 0.493732 5_2:+60303867 Msa0779130:CDS
GGGGTCAACATTGAAGCGAT+TGG 0.494460 5_2:-60302808 None:intergenic
TATTACTCTCAGGGTTATGT+TGG 0.504614 5_2:+60298869 Msa0779130:intron
CCTCATTGGAAGCCATCTAA+AGG 0.505751 5_2:+60304395 Msa0779130:CDS
TGTAACTCAATTCATGCAGC+TGG 0.505953 5_2:+60303856 Msa0779130:CDS
CAACTCTGGGATCTAATTGA+AGG 0.506637 5_2:+60299220 Msa0779130:CDS
AGTATAGTACAATAAATCAT+TGG 0.506948 5_2:-60299251 None:intergenic
GATTGAGTGTGTAGAAAGAA+TGG 0.508049 5_2:-60298220 None:intergenic
CGAGTTCTGCAGCCTTCTCA+AGG 0.509699 5_2:-60306201 None:intergenic
TGGAAGCCATCTAAAGGAAA+AGG 0.511024 5_2:+60304401 Msa0779130:CDS
TGCTTGCTTGCTTGCCTGTG+TGG 0.511262 5_2:-60298967 None:intergenic
GCTTTATGTTCCACAAGAGC+TGG 0.512326 5_2:+60302497 Msa0779130:CDS
CTTGATGATTACAAAAGTGC+TGG 0.513356 5_2:+60306468 Msa0779130:CDS
GGGGTTTATTGAGCGAAGCT+TGG 0.515208 5_2:-60300822 None:intergenic
ATGTTCAATTATAGCACTGC+AGG 0.518520 5_2:+60306651 Msa0779130:three_prime_UTR
TACACTGTCACCAGCTCTTG+TGG 0.526610 5_2:-60302507 None:intergenic
CCTTTAGATGGCTTCCAATG+AGG 0.528708 5_2:-60304395 None:intergenic
ATTCATACCGTAAAATAAGC+TGG 0.529696 5_2:-60305626 None:intergenic
GGAAGAGCTAAGGAAAGAAT+CGG 0.535514 5_2:-60298435 None:intergenic
GCAATCTTAAATTGTTTGGG+AGG 0.538067 5_2:-60305590 None:intergenic
CTTATATCATGAACAAAAGG+AGG 0.539851 5_2:+60298062 Msa0779130:five_prime_UTR
TTACAAGTATAAATGTAGAT+GGG 0.542416 5_2:+60304364 Msa0779130:CDS
AAGTCAAATTTGTGTTAGGT+CGG 0.545378 5_2:+60306714 Msa0779130:three_prime_UTR
CGATTTCAGATTCAACGAAG+AGG 0.550061 5_2:+60298394 Msa0779130:intron
TTGAATGCTGAGTACTCGAC+CGG 0.551447 5_2:-60298466 None:intergenic
TTTCTATAATTGATCGACAA+AGG 0.552624 5_2:-60306617 None:intergenic
AACGAAGAGGAATTCATCAA+TGG 0.559178 5_2:+60298407 Msa0779130:CDS
GTTGCTGTCCATTTAAAACC+TGG 0.567429 5_2:-60299201 None:intergenic
AGGATTCAGTCTGAAGAAGA+TGG 0.568689 5_2:+60303823 Msa0779130:intron
TTTAAATGGACAGCAACTCT+GGG 0.571824 5_2:+60299207 Msa0779130:CDS
AGTACTCGACCGGTTTCGGA+AGG 0.578609 5_2:-60298456 None:intergenic
CAGAATTACTGACAGGACTC+AGG 0.582541 5_2:+60302845 Msa0779130:CDS
GGGAAAATGAAAATCTGGAA+GGG 0.582947 5_2:-60298248 None:intergenic
ACTCGCGGTATCAAGCGTAC+AGG 0.589125 5_2:+60306219 Msa0779130:CDS
TGGTGACAGTGTACCGTGAG+AGG 0.589337 5_2:+60302517 Msa0779130:CDS
GATCCAGTATTGGGTGATGA+AGG 0.594822 5_2:+60302471 Msa0779130:CDS
TTTGAAGCAGAATTACTGAC+AGG 0.602351 5_2:+60302838 Msa0779130:CDS
TTCTGCTTCAAACTGGTTGG+GGG 0.607738 5_2:-60302827 None:intergenic
TCTCACCATATGTAAGCTTG+GGG 0.617919 5_2:-60300841 None:intergenic
ATGAATCAATGAGACAAGGA+AGG 0.624100 5_2:-60298154 None:intergenic
GGATCAGTCTTACCCTCTCA+CGG 0.627957 5_2:-60302530 None:intergenic
GGTGACAGTGTACCGTGAGA+GGG 0.631189 5_2:+60302518 Msa0779130:CDS
TCATAGCCCAAAAGTTGCAG+AGG 0.634972 5_2:-60298911 None:intergenic
TCATTCGTTTCAGAAACACC+CGG 0.638652 5_2:+60306174 Msa0779130:intron
TGAGAAGGCTGCAGAACTCG+CGG 0.646112 5_2:+60306204 Msa0779130:CDS
GGAAAATGAAAATCTGGAAG+GGG 0.646477 5_2:-60298247 None:intergenic
GGGGAAAATGAAAATCTGGA+AGG 0.652043 5_2:-60298249 None:intergenic
TTATATCATGAACAAAAGGA+GGG 0.654827 5_2:+60298063 Msa0779130:five_prime_UTR
ACACCCGGACAACCTTGAGA+AGG 0.658420 5_2:+60306189 Msa0779130:CDS
GAAAGAATGGAGTAACGTTG+CGG 0.658771 5_2:-60298207 None:intergenic
GGTTTCGGAAGGAAGAGCTA+AGG 0.661047 5_2:-60298445 None:intergenic
AAAATAATGAGTTTCTTCTG+GGG 0.661319 5_2:-60298268 None:intergenic
TGAATGTGATTTGTGGACTG+CGG 0.665592 5_2:-60306548 None:intergenic
ATGAATGAATCAATGAGACA+AGG 0.681213 5_2:-60298158 None:intergenic
AGAGCTAAGGAAAGAATCGG+AGG 0.686891 5_2:-60298432 None:intergenic
GCTCCAACCGAGAAGAAGTG+CGG 0.693199 5_2:-60306060 None:intergenic
TGTGTGGTTTGAAAACTGCA+CGG 0.733496 5_2:-60298951 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAATTAAATTATTATACAAA+CGG - chr5_2:60299320-60299339 None:intergenic 10.0%
!! TATTCATAATATGAAATAAA+AGG + chr5_2:60299728-60299747 Msa0779130:intron 10.0%
!! ATTCATAATATGAAATAAAA+GGG + chr5_2:60299729-60299748 Msa0779130:intron 10.0%
!!! AAATTTTTGTTTTAAAAAAC+AGG - chr5_2:60301219-60301238 None:intergenic 10.0%
!! AAAAATAAATAAAATGAGTT+GGG - chr5_2:60301418-60301437 None:intergenic 10.0%
!!! TATTTTTTTTTATAATAGGT+AGG + chr5_2:60301866-60301885 Msa0779130:intron 10.0%
!! ATATATAATTACAACATATT+AGG + chr5_2:60303674-60303693 Msa0779130:intron 10.0%
!!! TATTTTATATTTTTCTCTTA+CGG + chr5_2:60303725-60303744 Msa0779130:intron 10.0%
!!! TTAATCATATATCTAAAATT+AGG - chr5_2:60304530-60304549 None:intergenic 10.0%
!!! TTTTAATTTTATATACTCAA+TGG + chr5_2:60305498-60305517 Msa0779130:intron 10.0%
!! TATACAATAAATTTATTGTT+TGG + chr5_2:60305648-60305667 Msa0779130:intron 10.0%
!! AAAAAAAAAAAGAATTTCAA+AGG - chr5_2:60306677-60306696 None:intergenic 10.0%
!!! GTGTAAAAATTTTATATTGA+TGG + chr5_2:60298085-60298104 Msa0779130:five_prime_UTR 15.0%
!! AAAGATTATATTCAATAGAA+CGG - chr5_2:60298573-60298592 None:intergenic 15.0%
!! TCTAGTATTAAATTTATTAG+TGG - chr5_2:60299647-60299666 None:intergenic 15.0%
!!! GTTATTGTTTTACTATTTAT+AGG + chr5_2:60299800-60299819 Msa0779130:intron 15.0%
!!! TGAGCTTTTTAATAAAAAAT+TGG + chr5_2:60300106-60300125 Msa0779130:intron 15.0%
!! GTAACATATAATTTCTAATA+GGG - chr5_2:60300652-60300671 None:intergenic 15.0%
!! TTATTAGCAAAAAATAATTG+AGG + chr5_2:60300933-60300952 Msa0779130:intron 15.0%
!! CAAAAATAAATAAAATGAGT+TGG - chr5_2:60301419-60301438 None:intergenic 15.0%
!!! CAACTCATTTTATTTATTTT+TGG + chr5_2:60301417-60301436 Msa0779130:intron 15.0%
!!! TTAAAAATAAAAGAGTGTTT+AGG - chr5_2:60301485-60301504 None:intergenic 15.0%
!! AGAAAAATAACATGAAATTT+AGG - chr5_2:60301661-60301680 None:intergenic 15.0%
!!! ATATTTTTTTCTTTTGCTAT+TGG + chr5_2:60301719-60301738 Msa0779130:intron 15.0%
!! ATCATGTATATTATTACATA+TGG - chr5_2:60302578-60302597 None:intergenic 15.0%
!! ACTTAATAAAAATACTATTG+AGG - chr5_2:60303147-60303166 None:intergenic 15.0%
!!! TAACCATATAAATATTTTAC+AGG + chr5_2:60303177-60303196 Msa0779130:intron 15.0%
!!! AACCATATAAATATTTTACA+GGG + chr5_2:60303178-60303197 Msa0779130:intron 15.0%
!! AAATAGAAATATGTTAATTC+TGG - chr5_2:60303205-60303224 None:intergenic 15.0%
!!! ATTTTTCAAATTGCAATATT+GGG - chr5_2:60303253-60303272 None:intergenic 15.0%
!!! AATTTTTCAAATTGCAATAT+TGG - chr5_2:60303254-60303273 None:intergenic 15.0%
!!! TAGTATTTTCTTTTTAAAAG+TGG + chr5_2:60304081-60304100 Msa0779130:intron 15.0%
!! ATATATATATATATTACCAG+TGG - chr5_2:60304456-60304475 None:intergenic 15.0%
!! AGAAAAAAAAAATATCACAT+TGG - chr5_2:60305007-60305026 None:intergenic 15.0%
!!! GAAATTTTCTATATTCATTT+TGG + chr5_2:60306392-60306411 Msa0779130:intron 15.0%
!! CATTCAAAAGTTATAAGTTA+TGG + chr5_2:60298679-60298698 Msa0779130:intron 20.0%
!! TAAGTTATGGATAATGAATA+TGG + chr5_2:60298692-60298711 Msa0779130:intron 20.0%
!! AGTATAGTACAATAAATCAT+TGG - chr5_2:60299254-60299273 None:intergenic 20.0%
!!! GTATTTCTTTTTGAATAGTA+TGG - chr5_2:60299672-60299691 None:intergenic 20.0%
!! GAACATTTAAGTAATGTTTA+AGG - chr5_2:60299702-60299721 None:intergenic 20.0%
!! TTGTACTAGTTGTATATAAT+TGG - chr5_2:60299780-60299799 None:intergenic 20.0%
!!! AGCGGAAAAAATATAATTTT+AGG + chr5_2:60300033-60300052 Msa0779130:intron 20.0%
!! TTTATTAAAAAGCTCATGTT+TGG - chr5_2:60300102-60300121 None:intergenic 20.0%
!! TAATAAAAAATTGGAAGAGT+CGG + chr5_2:60300115-60300134 Msa0779130:intron 20.0%
!! CGTAACATATAATTTCTAAT+AGG - chr5_2:60300653-60300672 None:intergenic 20.0%
!! AAGTCAGAATAATCAAAATA+AGG - chr5_2:60300730-60300749 None:intergenic 20.0%
!!! TTCTATTTAAGACATAGATT+TGG + chr5_2:60300888-60300907 Msa0779130:intron 20.0%
!! ATAGGAACAAAATTTAACTA+CGG + chr5_2:60300980-60300999 Msa0779130:intron 20.0%
!! TTTATGAAGGGAAAAAAATT+TGG + chr5_2:60301386-60301405 Msa0779130:intron 20.0%
!! TTATGAAGGGAAAAAAATTT+GGG + chr5_2:60301387-60301406 Msa0779130:intron 20.0%
!! AAAATACAAGAGTAATAATC+TGG - chr5_2:60301508-60301527 None:intergenic 20.0%
!! TATATCTATGCATATAAGTA+TGG - chr5_2:60301702-60301721 None:intergenic 20.0%
!! AAAATAACAATGAGGAATAA+GGG - chr5_2:60302302-60302321 None:intergenic 20.0%
!! AAAAATAACAATGAGGAATA+AGG - chr5_2:60302303-60302322 None:intergenic 20.0%
!! TGACAATAAAAATAACAATG+AGG - chr5_2:60302310-60302329 None:intergenic 20.0%
!!! AAACATATTTTTCTTTTGTC+TGG + chr5_2:60302723-60302742 Msa0779130:intron 20.0%
!! AAGAAAGGTAACATTTAAAT+GGG - chr5_2:60302749-60302768 None:intergenic 20.0%
!!! AACATATTTCTATTTTCATG+AGG + chr5_2:60303210-60303229 Msa0779130:intron 20.0%
!!! TGTCTATCTCATATTTTTTA+AGG + chr5_2:60303322-60303341 Msa0779130:intron 20.0%
!!! GTCTATCTCATATTTTTTAA+GGG + chr5_2:60303323-60303342 Msa0779130:intron 20.0%
!!! TCTATCTCATATTTTTTAAG+GGG + chr5_2:60303324-60303343 Msa0779130:intron 20.0%
!! TTTCGGCTTATAAATATAAA+CGG + chr5_2:60303348-60303367 Msa0779130:intron 20.0%
!! AAGATATCTATATATGAAAG+GGG - chr5_2:60303374-60303393 None:intergenic 20.0%
!! CAAGATATCTATATATGAAA+GGG - chr5_2:60303375-60303394 None:intergenic 20.0%
!! ACAAGATATCTATATATGAA+AGG - chr5_2:60303376-60303395 None:intergenic 20.0%
!! CATGGGTTTATAAATATTAA+AGG + chr5_2:60303402-60303421 Msa0779130:intron 20.0%
!! AATATCTTATACATTTGAGA+CGG - chr5_2:60303430-60303449 None:intergenic 20.0%
!!! TTTTTGAACATTTGTTGTTA+TGG + chr5_2:60303560-60303579 Msa0779130:intron 20.0%
!! AAATATAATTTGAGAAGACA+TGG - chr5_2:60304202-60304221 None:intergenic 20.0%
!! ATTACAAGTATAAATGTAGA+TGG + chr5_2:60304363-60304382 Msa0779130:CDS 20.0%
!! TTACAAGTATAAATGTAGAT+GGG + chr5_2:60304364-60304383 Msa0779130:CDS 20.0%
!!! AATCTTATTTGACCAAAAAA+TGG + chr5_2:60304687-60304706 Msa0779130:intron 20.0%
!!! AATTTAGAATCTTAACAATG+AGG + chr5_2:60304745-60304764 Msa0779130:intron 20.0%
!!! ATTTAGAATCTTAACAATGA+GGG + chr5_2:60304746-60304765 Msa0779130:intron 20.0%
!!! ACATTGATTATACAATCAAA+AGG - chr5_2:60305314-60305333 None:intergenic 20.0%
!! ATTGCAATCTTAAATTGTTT+GGG - chr5_2:60305596-60305615 None:intergenic 20.0%
!! AATTGCAATCTTAAATTGTT+TGG - chr5_2:60305597-60305616 None:intergenic 20.0%
!! TTTCATTGCAAAAAATACAA+TGG + chr5_2:60305825-60305844 Msa0779130:intron 20.0%
!!! TATACTAATGTTTTCAATCT+TGG - chr5_2:60305921-60305940 None:intergenic 20.0%
!! TAATGATCACAATATTATGT+AGG + chr5_2:60306428-60306447 Msa0779130:intron 20.0%
!! ATATAAGTCAAATTTGTGTT+AGG + chr5_2:60306710-60306729 Msa0779130:three_prime_UTR 20.0%
! CATCTTATATCATGAACAAA+AGG + chr5_2:60298059-60298078 Msa0779130:five_prime_UTR 25.0%
! TTATATCATGAACAAAAGGA+GGG + chr5_2:60298063-60298082 Msa0779130:five_prime_UTR 25.0%
! AAAATAATGAGTTTCTTCTG+GGG - chr5_2:60298271-60298290 None:intergenic 25.0%
! GAAAATAATGAGTTTCTTCT+GGG - chr5_2:60298272-60298291 None:intergenic 25.0%
!! AGAAGAAACTCATTATTTTC+CGG + chr5_2:60298272-60298291 Msa0779130:CDS 25.0%
! TGAAGAAGAGAAAATAGAAA+TGG - chr5_2:60298368-60298387 None:intergenic 25.0%
! AATCTGTGAAATATTCAGAT+TGG + chr5_2:60298545-60298564 Msa0779130:intron 25.0%
! GTTAAGTGAAGATAAAATTG+TGG - chr5_2:60298745-60298764 None:intergenic 25.0%
! TCTTACGTTTACACTTATAT+TGG + chr5_2:60298831-60298850 Msa0779130:intron 25.0%
!!! TATTTGTTGTTATTACTCTC+AGG + chr5_2:60298859-60298878 Msa0779130:intron 25.0%
!!! ATTTGTTGTTATTACTCTCA+GGG + chr5_2:60298860-60298879 Msa0779130:intron 25.0%
! CACAGTAAAATAACGAAAAA+TGG - chr5_2:60299159-60299178 None:intergenic 25.0%
! TACTATACTCACTTATTAAC+AGG + chr5_2:60299265-60299284 Msa0779130:CDS 25.0%
! TCTCATAAATGGACAATAAA+TGG + chr5_2:60300256-60300275 Msa0779130:intron 25.0%
! AATAGAAAAATGCCAAAAAC+CGG - chr5_2:60300460-60300479 None:intergenic 25.0%
! CATATAGTTTCTAATACCAT+AGG - chr5_2:60300532-60300551 None:intergenic 25.0%
! GAAACTATATGTTCAAATCT+TGG + chr5_2:60300541-60300560 Msa0779130:intron 25.0%
! ACATATAATTTCTAATAGGG+TGG - chr5_2:60300649-60300668 None:intergenic 25.0%
!!! AATCTAACTAATGCTTTTTC+AGG + chr5_2:60300752-60300771 Msa0779130:intron 25.0%
!!! AATGCTTTTTCAGGTTATAT+TGG + chr5_2:60300761-60300780 Msa0779130:intron 25.0%
!! GTTAAATTTTGTTCCTATAC+TGG - chr5_2:60300978-60300997 None:intergenic 25.0%
! TGGCTTATACAAAAACAATT+AGG - chr5_2:60302099-60302118 None:intergenic 25.0%
!! AAAATAATCTAAAACAGCTC+AGG + chr5_2:60302155-60302174 Msa0779130:intron 25.0%
! AACTAAACTTAACTGGATTT+GGG - chr5_2:60302275-60302294 None:intergenic 25.0%
! AAACTAAACTTAACTGGATT+TGG - chr5_2:60302276-60302295 None:intergenic 25.0%
!! GATTTATACCTTTTGTATGT+TGG + chr5_2:60302358-60302377 Msa0779130:intron 25.0%
! AACAAAACACACATATGTAT+AGG - chr5_2:60302436-60302455 None:intergenic 25.0%
! TCAACATCTAATTTCAGTTA+CGG - chr5_2:60302667-60302686 None:intergenic 25.0%
! CAAGAAAGGTAACATTTAAA+TGG - chr5_2:60302750-60302769 None:intergenic 25.0%
! CTGTTGAGTAATATTAATCA+TGG - chr5_2:60302879-60302898 None:intergenic 25.0%
! AATCTATATGTTGACATGTA+AGG + chr5_2:60302948-60302967 Msa0779130:intron 25.0%
! ATCTATATGTTGACATGTAA+GGG + chr5_2:60302949-60302968 Msa0779130:intron 25.0%
! GTCCCTGTAAAATATTTATA+TGG - chr5_2:60303183-60303202 None:intergenic 25.0%
!!! CTATCTCATATTTTTTAAGG+GGG + chr5_2:60303325-60303344 Msa0779130:intron 25.0%
!!! TAGATATCTTGTTTTATGCA+TGG + chr5_2:60303384-60303403 Msa0779130:intron 25.0%
!!! AGATATCTTGTTTTATGCAT+GGG + chr5_2:60303385-60303404 Msa0779130:intron 25.0%
!! ATATCTTATACATTTGAGAC+GGG - chr5_2:60303429-60303448 None:intergenic 25.0%
!!! TATTTTTGTTTTATGCCTGT+TGG + chr5_2:60303446-60303465 Msa0779130:intron 25.0%
!!! ATTTTTGTTTTATGCCTGTT+GGG + chr5_2:60303447-60303466 Msa0779130:intron 25.0%
! AGATTATTCTGATCTTTAGA+AGG + chr5_2:60303624-60303643 Msa0779130:intron 25.0%
! ATGAACATACATTAGCTAAA+TGG - chr5_2:60304331-60304350 None:intergenic 25.0%
!! CTATATTGACTAATAATAGC+CGG + chr5_2:60304932-60304951 Msa0779130:intron 25.0%
!! TTTTCATTGGGTATATCAAT+AGG + chr5_2:60305231-60305250 Msa0779130:intron 25.0%
!! GTAAAATAAGCTGGTATTTT+GGG - chr5_2:60305620-60305639 None:intergenic 25.0%
!!! CAAAATACCAGCTTATTTTA+CGG + chr5_2:60305619-60305638 Msa0779130:CDS 25.0%
! AGACTAATAAGTAAATGACA+AGG - chr5_2:60306113-60306132 None:intergenic 25.0%
!! AACGAATGAAAACACATTTT+AGG - chr5_2:60306163-60306182 None:intergenic 25.0%
! ACATTTAAAAGCAAAGACAT+AGG - chr5_2:60306350-60306369 None:intergenic 25.0%
! TTTCTATAATTGATCGACAA+AGG - chr5_2:60306620-60306639 None:intergenic 25.0%
! TGTCGATCAATTATAGAAAT+TGG + chr5_2:60306621-60306640 Msa0779130:three_prime_UTR 25.0%
CTTATATCATGAACAAAAGG+AGG + chr5_2:60298062-60298081 Msa0779130:five_prime_UTR 30.0%
ATGAATGAATCAATGAGACA+AGG - chr5_2:60298161-60298180 None:intergenic 30.0%
GGAAAATAATGAGTTTCTTC+TGG - chr5_2:60298273-60298292 None:intergenic 30.0%
GAGAATTGAGAACAAACAAT+AGG - chr5_2:60298615-60298634 None:intergenic 30.0%
TCATGAATCCTGAAATGTTA+CGG + chr5_2:60298633-60298652 Msa0779130:intron 30.0%
TAACTTAACCGTAACATTTC+AGG - chr5_2:60298644-60298663 None:intergenic 30.0%
! ATTAACTAGATGTTCTAGGT+GGG + chr5_2:60298790-60298809 Msa0779130:intron 30.0%
GGGTTATGTTGGAAATAAAT+CGG + chr5_2:60298880-60298899 Msa0779130:intron 30.0%
TGTTACATTAGTAGCATTTG+TGG + chr5_2:60299037-60299056 Msa0779130:intron 30.0%
AGAGAAGAAAAATAATCCCA+TGG + chr5_2:60299095-60299114 Msa0779130:intron 30.0%
!! TTTTCGTTATTTTACTGTGC+AGG + chr5_2:60299160-60299179 Msa0779130:intron 30.0%
!! TTTCGTTATTTTACTGTGCA+GGG + chr5_2:60299161-60299180 Msa0779130:intron 30.0%
!! ACAATAAATCATTGGCTTCA+AGG - chr5_2:60299246-60299265 None:intergenic 30.0%
AGGGATAGCAAAATCAAAAA+TGG + chr5_2:60299748-60299767 Msa0779130:intron 30.0%
!!! ACTATCCTAGTTTTGCTATT+AGG + chr5_2:60299964-60299983 Msa0779130:intron 30.0%
!!! CTATCCTAGTTTTGCTATTA+GGG + chr5_2:60299965-60299984 Msa0779130:intron 30.0%
GGAATAGAATAACGATTTGA+TGG - chr5_2:60300223-60300242 None:intergenic 30.0%
ATGGAAGAGATTAAGCATTA+TGG - chr5_2:60300302-60300321 None:intergenic 30.0%
AGCTGAACATAGCTTATATA+TGG - chr5_2:60300321-60300340 None:intergenic 30.0%
GAAATAACTGAATAGTGTTG+TGG - chr5_2:60300431-60300450 None:intergenic 30.0%
! ATTCAGTTATTTCACATAGC+CGG + chr5_2:60300438-60300457 Msa0779130:intron 30.0%
TAGGAGATATATTTGCAAGA+AGG - chr5_2:60300513-60300532 None:intergenic 30.0%
TCTTGCAAATATATCTCCTA+TGG + chr5_2:60300513-60300532 Msa0779130:intron 30.0%
! TTCTTTTCTCAACACAGTAT+TGG + chr5_2:60300790-60300809 Msa0779130:CDS 30.0%
! GTTTAGAATATGACCAGTAT+AGG + chr5_2:60300962-60300981 Msa0779130:intron 30.0%
!!! TCGTAATGAGTTTTTTGATC+TGG + chr5_2:60301173-60301192 Msa0779130:intron 30.0%
!!! CGTAATGAGTTTTTTGATCT+GGG + chr5_2:60301174-60301193 Msa0779130:intron 30.0%
AACAAAAATTTCTGATCACG+TGG + chr5_2:60301228-60301247 Msa0779130:intron 30.0%
GGCATGTAGAAAAAAACAAA+GGG - chr5_2:60301293-60301312 None:intergenic 30.0%
TGGCATGTAGAAAAAAACAA+AGG - chr5_2:60301294-60301313 None:intergenic 30.0%
!!! GTTTTTTTCTACATGCCAAT+TGG + chr5_2:60301296-60301315 Msa0779130:intron 30.0%
TTACACTGTAACAAACCAAT+TGG - chr5_2:60301314-60301333 None:intergenic 30.0%
!!! AGCTTGGGTTTTTTTATGAA+GGG + chr5_2:60301374-60301393 Msa0779130:intron 30.0%
TTTGAGAGAATGGAGAAATT+TGG + chr5_2:60301451-60301470 Msa0779130:intron 30.0%
AACACACAAATAAACACACA+CGG + chr5_2:60301752-60301771 Msa0779130:intron 30.0%
TTCAGCTGTTTATTGAAACA+GGG - chr5_2:60301998-60302017 None:intergenic 30.0%
ATTCAGCTGTTTATTGAAAC+AGG - chr5_2:60301999-60302018 None:intergenic 30.0%
GACTTATTTGAGCTTATCTA+CGG - chr5_2:60302238-60302257 None:intergenic 30.0%
ACTAAACTTAACTGGATTTG+GGG - chr5_2:60302274-60302293 None:intergenic 30.0%
AAATAAGAACCCAAAAAGCA+TGG - chr5_2:60302691-60302710 None:intergenic 30.0%
! TACTCAACAGTTTTTCTGTT+TGG + chr5_2:60302889-60302908 Msa0779130:intron 30.0%
AACATGTTTCCAGTTGTATA+GGG - chr5_2:60303055-60303074 None:intergenic 30.0%
! ACTTGACTGTCGTATTATTT+TGG - chr5_2:60303114-60303133 None:intergenic 30.0%
!!! CATATTTTTTAAGGGGGTTT+CGG + chr5_2:60303331-60303350 Msa0779130:intron 30.0%
! TATCTTATACATTTGAGACG+GGG - chr5_2:60303428-60303447 None:intergenic 30.0%
!!! TTTTAGCTTGATGTTGCTTT+TGG + chr5_2:60303532-60303551 Msa0779130:intron 30.0%
TGTTGTTATGGAACTAATTG+AGG + chr5_2:60303572-60303591 Msa0779130:intron 30.0%
CTAAAGATCAGAATAATCTG+TGG - chr5_2:60303623-60303642 None:intergenic 30.0%
TATTTGTAGCAAACCTTTGA+AGG - chr5_2:60303883-60303902 None:intergenic 30.0%
AACAAGAAAGTTTGAATCTG+AGG + chr5_2:60304139-60304158 Msa0779130:intron 30.0%
ATACTTGTAATTACAACCTG+AGG - chr5_2:60304354-60304373 None:intergenic 30.0%
ACGTATAATGTTATTACCAC+TGG + chr5_2:60304437-60304456 Msa0779130:intron 30.0%
CAAATCATTGTAATAACTCG+AGG - chr5_2:60304612-60304631 None:intergenic 30.0%
CTTATTTGACCAAAAAATGG+AGG + chr5_2:60304690-60304709 Msa0779130:intron 30.0%
!!! ACTAGTGAGCTATTTTTCAT+TGG + chr5_2:60305218-60305237 Msa0779130:intron 30.0%
!!! CTAGTGAGCTATTTTTCATT+GGG + chr5_2:60305219-60305238 Msa0779130:intron 30.0%
! AAATCATAGCTTGTAGACAT+AGG - chr5_2:60305391-60305410 None:intergenic 30.0%
ATAAACACACATGATAACCA+TGG + chr5_2:60305413-60305432 Msa0779130:intron 30.0%
! TTTTATTACCTTTTGTGTGC+AGG + chr5_2:60305562-60305581 Msa0779130:intron 30.0%
! TTTATTACCTTTTGTGTGCA+GGG + chr5_2:60305563-60305582 Msa0779130:intron 30.0%
! CGTAAAATAAGCTGGTATTT+TGG - chr5_2:60305621-60305640 None:intergenic 30.0%
ATTCATACCGTAAAATAAGC+TGG - chr5_2:60305629-60305648 None:intergenic 30.0%
!! AGTGGAATTTTAACCCTTTA+TGG - chr5_2:60305726-60305745 None:intergenic 30.0%
AGCAACAGTGTTTATTTGAA+AGG - chr5_2:60305801-60305820 None:intergenic 30.0%
GCAAAAAATACAATGGTCAA+AGG + chr5_2:60305832-60305851 Msa0779130:intron 30.0%
! ATGTTTTCAATCTTGGATAG+CGG - chr5_2:60305914-60305933 None:intergenic 30.0%
!!! TACGCAATTTGTTTTAATGC+TGG + chr5_2:60306015-60306034 Msa0779130:intron 30.0%
!!! AATTTGTTTTAATGCTGGCA+GGG + chr5_2:60306020-60306039 Msa0779130:intron 30.0%
AAACAACGATTCCACAATAT+TGG - chr5_2:60306314-60306333 None:intergenic 30.0%
ATCTCTAAACTGGATGATTT+GGG - chr5_2:60306501-60306520 None:intergenic 30.0%
AATTAACCTGATCTCTAAAC+TGG - chr5_2:60306511-60306530 None:intergenic 30.0%
AGCTGAAATATACAGCTAAA+CGG + chr5_2:60306572-60306591 Msa0779130:exon 30.0%
AAGTCAAATTTGTGTTAGGT+CGG + chr5_2:60306714-60306733 Msa0779130:three_prime_UTR 30.0%
AGTTTCATTACACTCATTAC+TGG + chr5_2:60306776-60306795 Msa0779130:three_prime_UTR 30.0%
ACACTCATTACTGGAATATT+AGG + chr5_2:60306785-60306804 Msa0779130:three_prime_UTR 30.0%
ATGAATCAATGAGACAAGGA+AGG - chr5_2:60298157-60298176 None:intergenic 35.0%
GATTGAGTGTGTAGAAAGAA+TGG - chr5_2:60298223-60298242 None:intergenic 35.0%
GGAAAATGAAAATCTGGAAG+GGG - chr5_2:60298250-60298269 None:intergenic 35.0%
GGGAAAATGAAAATCTGGAA+GGG - chr5_2:60298251-60298270 None:intergenic 35.0%
! TTCTGGGGAAAATGAAAATC+TGG - chr5_2:60298256-60298275 None:intergenic 35.0%
AAGCGAAGCAGATGAAAATT+GGG - chr5_2:60298340-60298359 None:intergenic 35.0%
TAAGCGAAGCAGATGAAAAT+TGG - chr5_2:60298341-60298360 None:intergenic 35.0%
! CTCTTCGTTGAATCTGAAAT+CGG - chr5_2:60298396-60298415 None:intergenic 35.0%
AACGAAGAGGAATTCATCAA+TGG + chr5_2:60298407-60298426 Msa0779130:CDS 35.0%
CCTAGAACATCTAGTTAATC+AGG - chr5_2:60298789-60298808 None:intergenic 35.0%
CCTGATTAACTAGATGTTCT+AGG + chr5_2:60298786-60298805 Msa0779130:intron 35.0%
! GATTAACTAGATGTTCTAGG+TGG + chr5_2:60298789-60298808 Msa0779130:intron 35.0%
! TTAACTAGATGTTCTAGGTG+GGG + chr5_2:60298791-60298810 Msa0779130:intron 35.0%
TATTACTCTCAGGGTTATGT+TGG + chr5_2:60298869-60298888 Msa0779130:intron 35.0%
! TGTTTTTCCTCTGCAACTTT+TGG + chr5_2:60298904-60298923 Msa0779130:CDS 35.0%
! GTTTTTCCTCTGCAACTTTT+GGG + chr5_2:60298905-60298924 Msa0779130:CDS 35.0%
GAAAACTGCACGGAATTAAT+TGG - chr5_2:60298944-60298963 None:intergenic 35.0%
!! GTTGATAGACATTTTGCCAT+GGG - chr5_2:60299114-60299133 None:intergenic 35.0%
!!! AGTTGATAGACATTTTGCCA+TGG - chr5_2:60299115-60299134 None:intergenic 35.0%
TGTCTATCAACTTGAGAATG+AGG + chr5_2:60299123-60299142 Msa0779130:intron 35.0%
TATCAACTTGAGAATGAGGT+GGG + chr5_2:60299127-60299146 Msa0779130:intron 35.0%
!!! TTTAAGGGCCAGGTTTTAAA+TGG + chr5_2:60299193-60299212 Msa0779130:CDS 35.0%
! TTTTAAATGGACAGCAACTC+TGG + chr5_2:60299206-60299225 Msa0779130:CDS 35.0%
TTTAAATGGACAGCAACTCT+GGG + chr5_2:60299207-60299226 Msa0779130:CDS 35.0%
TACTATTTATAGGTCCGCTT+TGG + chr5_2:60299810-60299829 Msa0779130:intron 35.0%
GTGTCTATCTCTCTCATAAA+TGG - chr5_2:60300245-60300264 None:intergenic 35.0%
TTATGAGAGAGATAGACACA+AGG - chr5_2:60300181-60300200 None:intergenic 35.0%
GTGTCTATCTCTCTCATAAA+TGG + chr5_2:60300245-60300264 Msa0779130:intron 35.0%
ACTGTGCATACAAACAAGAA+GGG - chr5_2:60300350-60300369 None:intergenic 35.0%
GACTTATTTCAACCACTATG+TGG + chr5_2:60300391-60300410 Msa0779130:intron 35.0%
!! TATTTCACATAGCCGGTTTT+TGG + chr5_2:60300445-60300464 Msa0779130:intron 35.0%
TTGGAAATAGTCTTTCCAGT+TGG + chr5_2:60300560-60300579 Msa0779130:intron 35.0%
AAATAGTCTTTCCAGTTGGT+GGG + chr5_2:60300564-60300583 Msa0779130:intron 35.0%
ATAAACCCCAAGCTTACATA+TGG + chr5_2:60300836-60300855 Msa0779130:CDS 35.0%
ATCTCACCATATGTAAGCTT+GGG - chr5_2:60300845-60300864 None:intergenic 35.0%
AATCTCACCATATGTAAGCT+TGG - chr5_2:60300846-60300865 None:intergenic 35.0%
!! ATGGTGAGATTACTGATTCA+CGG + chr5_2:60300855-60300874 Msa0779130:intron 35.0%
TTGGTCTAAGTCTAACTTAG+AGG + chr5_2:60300907-60300926 Msa0779130:intron 35.0%
AAAAAAACCCAAGCTGTACT+GGG - chr5_2:60301369-60301388 None:intergenic 35.0%
TAAAAAAACCCAAGCTGTAC+TGG - chr5_2:60301370-60301389 None:intergenic 35.0%
!!! CAGCTTGGGTTTTTTTATGA+AGG + chr5_2:60301373-60301392 Msa0779130:intron 35.0%
! TAAATAAAATGAGTTGGGCC+AGG - chr5_2:60301413-60301432 None:intergenic 35.0%
TTAGACTCTGTTTGAGAGAA+TGG + chr5_2:60301441-60301460 Msa0779130:intron 35.0%
!!! TTCTTTTGCTATTGGCTTAG+TGG + chr5_2:60301727-60301746 Msa0779130:intron 35.0%
GTGTGTGTTTATTTGTGTGT+TGG - chr5_2:60301753-60301772 None:intergenic 35.0%
ACACACAAATAAACACACAC+GGG + chr5_2:60301753-60301772 Msa0779130:intron 35.0%
GATCTCATGTTTGACTACAT+TGG + chr5_2:60301952-60301971 Msa0779130:intron 35.0%
! TAGTGGATGAAAACAGCTTA+TGG - chr5_2:60302119-60302138 None:intergenic 35.0%
CTAAACTTAACTGGATTTGG+GGG - chr5_2:60302273-60302292 None:intergenic 35.0%
GGGTTGAAACTAAACTTAAC+TGG - chr5_2:60302282-60302301 None:intergenic 35.0%
AGGTATAAATCATATTCCCC+AGG - chr5_2:60302349-60302368 None:intergenic 35.0%
ATTGACGTCCAACATACAAA+AGG - chr5_2:60302369-60302388 None:intergenic 35.0%
TCAGTATGTGATCCAGTATT+GGG + chr5_2:60302462-60302481 Msa0779130:intron 35.0%
TTACAGTACATGAACTTCTC+TGG + chr5_2:60302607-60302626 Msa0779130:intron 35.0%
! AGATGTTGATCCATGCTTTT+TGG + chr5_2:60302678-60302697 Msa0779130:intron 35.0%
!! GATGTTGATCCATGCTTTTT+GGG + chr5_2:60302679-60302698 Msa0779130:intron 35.0%
CTGAGATGTCAAAACAAGAA+AGG - chr5_2:60302764-60302783 None:intergenic 35.0%
TCAGTAACACACATTTCATC+AGG + chr5_2:60302780-60302799 Msa0779130:intron 35.0%
AATTCTGCTTCAAACTGGTT+GGG - chr5_2:60302832-60302851 None:intergenic 35.0%
TAATTCTGCTTCAAACTGGT+TGG - chr5_2:60302833-60302852 None:intergenic 35.0%
TCAGTAATTCTGCTTCAAAC+TGG - chr5_2:60302837-60302856 None:intergenic 35.0%
! TTTGAAGCAGAATTACTGAC+AGG + chr5_2:60302838-60302857 Msa0779130:CDS 35.0%
TTTCTCTTGTACACAAGTTG+TGG + chr5_2:60303010-60303029 Msa0779130:intron 35.0%
TTCTCTTGTACACAAGTTGT+GGG + chr5_2:60303011-60303030 Msa0779130:intron 35.0%
!!! GTTTTTAGTCCCTATACAAC+TGG + chr5_2:60303043-60303062 Msa0779130:intron 35.0%
CAACATGTTTCCAGTTGTAT+AGG - chr5_2:60303056-60303075 None:intergenic 35.0%
TTGGGTGCATGTGTAAATTT+GGG + chr5_2:60303465-60303484 Msa0779130:intron 35.0%
TGTGATATGAAACCTTCAGA+GGG - chr5_2:60303804-60303823 None:intergenic 35.0%
GAATTGAGTTACAAGCTTCT+CGG - chr5_2:60303849-60303868 None:intergenic 35.0%
GAAAACAAATCCGATCTTTC+TGG + chr5_2:60303951-60303970 Msa0779130:intron 35.0%
ATTTGAGAAGACATGGACAT+GGG - chr5_2:60304195-60304214 None:intergenic 35.0%
AATTTGAGAAGACATGGACA+TGG - chr5_2:60304196-60304215 None:intergenic 35.0%
!!! CAGTTTGGTTTTCAGAAATG+TGG - chr5_2:60304658-60304677 None:intergenic 35.0%
! TTTCTGAAAACCAAACTGAC+TGG + chr5_2:60304660-60304679 Msa0779130:intron 35.0%
! TTCTGAAAACCAAACTGACT+GGG + chr5_2:60304661-60304680 Msa0779130:intron 35.0%
GCTTGCACATTATTGTAATG+TGG + chr5_2:60304819-60304838 Msa0779130:intron 35.0%
TCATATTACCCAACCACATA+GGG - chr5_2:60304845-60304864 None:intergenic 35.0%
ATCATATTACCCAACCACAT+AGG - chr5_2:60304846-60304865 None:intergenic 35.0%
AATATAATAGCCACCCTATG+TGG + chr5_2:60304886-60304905 Msa0779130:intron 35.0%
ATGCATACACTATATAGCCT+TGG + chr5_2:60305046-60305065 Msa0779130:intron 35.0%
! ATAGCCTTGGAAATATCACA+TGG + chr5_2:60305059-60305078 Msa0779130:intron 35.0%
GATTCCATGTGATATTTCCA+AGG - chr5_2:60305066-60305085 None:intergenic 35.0%
AAAAATGTCAGTGAAGAGTG+TGG - chr5_2:60305482-60305501 None:intergenic 35.0%
GCAATCTTAAATTGTTTGGG+AGG - chr5_2:60305593-60305612 None:intergenic 35.0%
ATCCAAGAAAAAAATCCGAG+TGG + chr5_2:60305684-60305703 Msa0779130:intron 35.0%
! TAATCGAGATTTGAGGTCAA+GGG - chr5_2:60305868-60305887 None:intergenic 35.0%
! ATAATCGAGATTTGAGGTCA+AGG - chr5_2:60305869-60305888 None:intergenic 35.0%
TACGCAATAATCGAGATTTG+AGG - chr5_2:60305875-60305894 None:intergenic 35.0%
AAATCTCGATTATTGCGTAG+TGG + chr5_2:60305876-60305895 Msa0779130:intron 35.0%
! TACAGTTATTGACTGTTTGG+AGG - chr5_2:60305987-60306006 None:intergenic 35.0%
! AGCTACAGTTATTGACTGTT+TGG - chr5_2:60305990-60306009 None:intergenic 35.0%
!!! CAATTTGTTTTAATGCTGGC+AGG + chr5_2:60306019-60306038 Msa0779130:intron 35.0%
ATATTATGCACGCAATGACA+AGG - chr5_2:60306137-60306156 None:intergenic 35.0%
AACGATTCCACAATATTGGA+AGG - chr5_2:60306310-60306329 None:intergenic 35.0%
TGTGGAATCGTTGTTTATCT+TGG + chr5_2:60306318-60306337 Msa0779130:intron 35.0%
! TTATGTAGGCACTTTTGCAA+AGG + chr5_2:60306442-60306461 Msa0779130:intron 35.0%
! CTTGATGATTACAAAAGTGC+TGG + chr5_2:60306468-60306487 Msa0779130:CDS 35.0%
GATCTCTAAACTGGATGATT+TGG - chr5_2:60306502-60306521 None:intergenic 35.0%
AATCATCCAGTTTAGAGATC+AGG + chr5_2:60306502-60306521 Msa0779130:CDS 35.0%
!! TCAGCTTTGAATGTGATTTG+TGG - chr5_2:60306558-60306577 None:intergenic 35.0%
!! AATTGATCGACAAAGGCATT+TGG - chr5_2:60306613-60306632 None:intergenic 35.0%
ATGTTCAATTATAGCACTGC+AGG + chr5_2:60306651-60306670 Msa0779130:three_prime_UTR 35.0%
GAAAGAATGGAGTAACGTTG+CGG - chr5_2:60298210-60298229 None:intergenic 40.0%
ATGAAAATCTGGAAGGGGTT+GGG - chr5_2:60298245-60298264 None:intergenic 40.0%
AATGAAAATCTGGAAGGGGT+TGG - chr5_2:60298246-60298265 None:intergenic 40.0%
GGGGAAAATGAAAATCTGGA+AGG - chr5_2:60298252-60298271 None:intergenic 40.0%
! GGAGAGAGATGAGATTTTAC+CGG - chr5_2:60298294-60298313 None:intergenic 40.0%
CGATTTCAGATTCAACGAAG+AGG + chr5_2:60298394-60298413 Msa0779130:intron 40.0%
GGAAGAGCTAAGGAAAGAAT+CGG - chr5_2:60298438-60298457 None:intergenic 40.0%
CATTCAATCTCACACTGTTC+AGG + chr5_2:60298482-60298501 Msa0779130:CDS 40.0%
TGTGTGGTTTGAAAACTGCA+CGG - chr5_2:60298954-60298973 None:intergenic 40.0%
CTATCAACTTGAGAATGAGG+TGG + chr5_2:60299126-60299145 Msa0779130:intron 40.0%
!! TGCAGGGTATCCATCTTTTA+AGG + chr5_2:60299177-60299196 Msa0779130:intron 40.0%
!! GCAGGGTATCCATCTTTTAA+GGG + chr5_2:60299178-60299197 Msa0779130:intron 40.0%
AAAACCTGGCCCTTAAAAGA+TGG - chr5_2:60299190-60299209 None:intergenic 40.0%
! GTTGCTGTCCATTTAAAACC+TGG - chr5_2:60299204-60299223 None:intergenic 40.0%
!! CAACTCTGGGATCTAATTGA+AGG + chr5_2:60299220-60299239 Msa0779130:CDS 40.0%
! ACACACACGCACACAATTTT+CGG - chr5_2:60299381-60299400 None:intergenic 40.0%
CTTGCCCTAATAGCAAAACT+AGG - chr5_2:60299972-60299991 None:intergenic 40.0%
!!! AGTTTTGCTATTAGGGCAAG+TGG + chr5_2:60299972-60299991 Msa0779130:intron 40.0%
AGCTGATATAGCGACAATAG+CGG + chr5_2:60300015-60300034 Msa0779130:intron 40.0%
AGCTGAAGATTCTACATGTG+TGG + chr5_2:60300075-60300094 Msa0779130:intron 40.0%
GCTGAAGATTCTACATGTGT+GGG + chr5_2:60300076-60300095 Msa0779130:intron 40.0%
AAAAATTGGAAGAGTCGGTG+AGG + chr5_2:60300120-60300139 Msa0779130:intron 40.0%
AGACACATGTGATTGCTTAG+TGG + chr5_2:60300194-60300213 Msa0779130:intron 40.0%
GACACATGTGATTGCTTAGT+GGG + chr5_2:60300195-60300214 Msa0779130:intron 40.0%
GCATACAAACAAGAAGGGAA+TGG - chr5_2:60300345-60300364 None:intergenic 40.0%
CACTGTGCATACAAACAAGA+AGG - chr5_2:60300351-60300370 None:intergenic 40.0%
GAATAGAAGAAGCCACATAG+TGG - chr5_2:60300406-60300425 None:intergenic 40.0%
GGTAACCAGTGTCATAATAG+CGG - chr5_2:60300492-60300511 None:intergenic 40.0%
GAAATAGTCTTTCCAGTTGG+TGG + chr5_2:60300563-60300582 Msa0779130:intron 40.0%
TCTCACCATATGTAAGCTTG+GGG - chr5_2:60300844-60300863 None:intergenic 40.0%
!! TGGTGAGATTACTGATTCAC+GGG + chr5_2:60300856-60300875 Msa0779130:intron 40.0%
GATCATAGGCTTCAATGTCA+TGG + chr5_2:60301061-60301080 Msa0779130:intron 40.0%
!!! TGAGTTTTTTGATCTGGGTC+AGG + chr5_2:60301179-60301198 Msa0779130:intron 40.0%
!!! TGGGTCAGGTTTTGTTTGAA+TGG + chr5_2:60301193-60301212 Msa0779130:intron 40.0%
ACAGTGTAAGTAGAGTTCAG+TGG + chr5_2:60301325-60301344 Msa0779130:intron 40.0%
AAGGGAAAAAAATTTGGGCC+TGG + chr5_2:60301392-60301411 Msa0779130:intron 40.0%
CACACAAATAAACACACACG+GGG + chr5_2:60301754-60301773 Msa0779130:intron 40.0%
! GGCTGTGAGGACATTTTATA+TGG - chr5_2:60301808-60301827 None:intergenic 40.0%
AAACCACAAGGCTGTAACAA+CGG + chr5_2:60301828-60301847 Msa0779130:intron 40.0%
TCAAACATGAGATCCTGCAT+AGG - chr5_2:60301946-60301965 None:intergenic 40.0%
! TTGGCTTGAATTGAACCATC+AGG + chr5_2:60301971-60301990 Msa0779130:intron 40.0%
TGGCTTGAATTGAACCATCA+GGG + chr5_2:60301972-60301991 Msa0779130:intron 40.0%
!! GCTGTTTTCATCCACTATCT+TGG + chr5_2:60302122-60302141 Msa0779130:intron 40.0%
TCAAAAGCTCTCCAAGATAG+TGG - chr5_2:60302136-60302155 None:intergenic 40.0%
TAAACACTTGTGAGACTGTC+TGG - chr5_2:60302212-60302231 None:intergenic 40.0%
!! AGCATTGACACTTAAAGCCT+GGG + chr5_2:60302329-60302348 Msa0779130:intron 40.0%
TACTGGATCACATACTGACA+AGG - chr5_2:60302460-60302479 None:intergenic 40.0%
GTCAGTATGTGATCCAGTAT+TGG + chr5_2:60302461-60302480 Msa0779130:intron 40.0%
TTTCCTTCATCACCCAATAC+TGG - chr5_2:60302477-60302496 None:intergenic 40.0%
CACTTGCAGAAACATCTTTG+TGG - chr5_2:60302554-60302573 None:intergenic 40.0%
ATTCTGCTTCAAACTGGTTG+GGG - chr5_2:60302831-60302850 None:intergenic 40.0%
TCTCTTGTACACAAGTTGTG+GGG + chr5_2:60303012-60303031 Msa0779130:intron 40.0%
AATTTACACATGCACCCAAC+AGG - chr5_2:60303464-60303483 None:intergenic 40.0%
GTTGGGTGCATGTGTAAATT+TGG + chr5_2:60303464-60303483 Msa0779130:intron 40.0%
!!! GAGCTTTTTTCTCACAGTGT+AGG - chr5_2:60303504-60303523 None:intergenic 40.0%
! TCAGAATAATCTGTGGACTG+TGG - chr5_2:60303616-60303635 None:intergenic 40.0%
CAGACAGAATAGACAGGAAT+CGG - chr5_2:60303761-60303780 None:intergenic 40.0%
TTCCTGTCTATTCTGTCTGT+TGG + chr5_2:60303762-60303781 Msa0779130:intron 40.0%
CTGTGATATGAAACCTTCAG+AGG - chr5_2:60303805-60303824 None:intergenic 40.0%
! CTCTGAAGGTTTCATATCAC+AGG + chr5_2:60303803-60303822 Msa0779130:intron 40.0%
AGGATTCAGTCTGAAGAAGA+TGG + chr5_2:60303823-60303842 Msa0779130:intron 40.0%
TGTAACTCAATTCATGCAGC+TGG + chr5_2:60303856-60303875 Msa0779130:CDS 40.0%
ATTCAGCAAACGAATGCACA+TGG - chr5_2:60303916-60303935 None:intergenic 40.0%
ATCCGATCTTTCTGGATTAC+AGG + chr5_2:60303959-60303978 Msa0779130:intron 40.0%
AGCCTGTAATCCAGAAAGAT+CGG - chr5_2:60303964-60303983 None:intergenic 40.0%
! TTGAATCTGAGGTACACACA+TGG + chr5_2:60304150-60304169 Msa0779130:intron 40.0%
GCTAATGTATGTTCATCCTC+AGG + chr5_2:60304335-60304354 Msa0779130:intron 40.0%
TGGAAGCCATCTAAAGGAAA+AGG + chr5_2:60304401-60304420 Msa0779130:CDS 40.0%
AAGCCATCTAAAGGAAAAGG+TGG + chr5_2:60304404-60304423 Msa0779130:intron 40.0%
AGCCATCTAAAGGAAAAGGT+GGG + chr5_2:60304405-60304424 Msa0779130:intron 40.0%
! ATCCCACCTTTTCCTTTAGA+TGG - chr5_2:60304410-60304429 None:intergenic 40.0%
TGACCAAAAAATGGAGGAAC+CGG + chr5_2:60304696-60304715 Msa0779130:intron 40.0%
ATCTGCCAACCAAATAAGAC+TGG - chr5_2:60304722-60304741 None:intergenic 40.0%
TAATTTGACTCTACGCTAGC+TGG - chr5_2:60304781-60304800 None:intergenic 40.0%
AGCTAGCGTAGAGTCAAATT+AGG + chr5_2:60304780-60304799 Msa0779130:intron 40.0%
TATTGTAATGTGGCCCTATG+TGG + chr5_2:60304829-60304848 Msa0779130:intron 40.0%
TCGTATGACTCATCCACATA+GGG - chr5_2:60304902-60304921 None:intergenic 40.0%
ATCGTATGACTCATCCACAT+AGG - chr5_2:60304903-60304922 None:intergenic 40.0%
GAGATGGACATACTCACTTA+GGG + chr5_2:60304963-60304982 Msa0779130:intron 40.0%
ATACTCACTTAGGGAGTTTG+AGG + chr5_2:60304972-60304991 Msa0779130:intron 40.0%
GTCTTCGCTCTAACTACATA+TGG + chr5_2:60305110-60305129 Msa0779130:intron 40.0%
TTCGCTCTAACTACATATGG+TGG + chr5_2:60305113-60305132 Msa0779130:intron 40.0%
TCGCTCTAACTACATATGGT+GGG + chr5_2:60305114-60305133 Msa0779130:intron 40.0%
AACACACATGATAACCATGG+CGG + chr5_2:60305416-60305435 Msa0779130:intron 40.0%
TGGTCTGTTAGTATAGACTG+TGG - chr5_2:60305462-60305481 None:intergenic 40.0%
!!! TGCCACTCGGATTTTTTTCT+TGG - chr5_2:60305689-60305708 None:intergenic 40.0%
! CGTTCATTTGGAGCCATAAA+GGG + chr5_2:60305710-60305729 Msa0779130:intron 40.0%
! AAAGGTACACACTGATGAGT+AGG - chr5_2:60305783-60305802 None:intergenic 40.0%
TCATTCGTTTCAGAAACACC+CGG + chr5_2:60306174-60306193 Msa0779130:intron 40.0%
TCTTCCTCCTTCCAATATTG+TGG + chr5_2:60306300-60306319 Msa0779130:intron 40.0%
GATTCCACAATATTGGAAGG+AGG - chr5_2:60306307-60306326 None:intergenic 40.0%
! TGAATGTGATTTGTGGACTG+CGG - chr5_2:60306551-60306570 None:intergenic 40.0%
! TGGAGTAACGTTGCGGTTTT+GGG - chr5_2:60298203-60298222 None:intergenic 45.0%
! ATGGAGTAACGTTGCGGTTT+TGG - chr5_2:60298204-60298223 None:intergenic 45.0%
AGAGCTAAGGAAAGAATCGG+AGG - chr5_2:60298435-60298454 None:intergenic 45.0%
! TTAGCTCTTCCTTCCGAAAC+CGG + chr5_2:60298447-60298466 Msa0779130:CDS 45.0%
TTGAATGCTGAGTACTCGAC+CGG - chr5_2:60298469-60298488 None:intergenic 45.0%
TCATAGCCCAAAAGTTGCAG+AGG - chr5_2:60298914-60298933 None:intergenic 45.0%
! GTGCAGTTTTCAAACCACAC+AGG + chr5_2:60298953-60298972 Msa0779130:CDS 45.0%
!! GTATCCATCTTTTAAGGGCC+AGG + chr5_2:60299183-60299202 Msa0779130:CDS 45.0%
! GTTGACTTCACAAATCGCGA+GGG - chr5_2:60299359-60299378 None:intergenic 45.0%
!! GGTGTTGCGGTTTTTATAGC+AGG - chr5_2:60299526-60299545 None:intergenic 45.0%
!! CATTGACAACAGAGGTGTTG+CGG - chr5_2:60299539-60299558 None:intergenic 45.0%
CAACACCTCTGTTGTCAATG+CGG + chr5_2:60299539-60299558 Msa0779130:intron 45.0%
! CATTTCCGCATTGACAACAG+AGG - chr5_2:60299547-60299566 None:intergenic 45.0%
TTGCGCACTGTTGTCAATAG+CGG - chr5_2:60299943-60299962 None:intergenic 45.0%
AGTGTCATAATAGCGGCTTG+CGG - chr5_2:60300485-60300504 None:intergenic 45.0%
!! GAGATTACTGATTCACGGGT+TGG + chr5_2:60300860-60300879 Msa0779130:intron 45.0%
TATGATCCTACGATCCTACG+AGG - chr5_2:60301048-60301067 None:intergenic 45.0%
TCGTAGGATCGTAGGATCAT+AGG + chr5_2:60301047-60301066 Msa0779130:intron 45.0%
AACTCACGATTTCAGCACAG+TGG - chr5_2:60301124-60301143 None:intergenic 45.0%
GTGTAAGTAGAGTTCAGTGG+TGG + chr5_2:60301328-60301347 Msa0779130:intron 45.0%
CAAGCTGTACTGGGTAAAAG+GGG - chr5_2:60301360-60301379 None:intergenic 45.0%
CCAAGCTGTACTGGGTAAAA+GGG - chr5_2:60301361-60301380 None:intergenic 45.0%
! CCTTTTACCCAGTACAGCTT+GGG + chr5_2:60301359-60301378 Msa0779130:intron 45.0%
ACAAATAAACACACACGGGG+AGG + chr5_2:60301757-60301776 Msa0779130:intron 45.0%
CAAATAAACACACACGGGGA+GGG + chr5_2:60301758-60301777 Msa0779130:intron 45.0%
AAATAAACACACACGGGGAG+GGG + chr5_2:60301759-60301778 Msa0779130:intron 45.0%
! GTTGTTACAGCCTTGTGGTT+TGG - chr5_2:60301829-60301848 None:intergenic 45.0%
AACCACAAGGCTGTAACAAC+GGG + chr5_2:60301829-60301848 Msa0779130:intron 45.0%
GGGGGTGAAATAGCATAACT+TGG - chr5_2:60301916-60301935 None:intergenic 45.0%
ATGAGATCCTGCATAGGATC+AGG - chr5_2:60301940-60301959 None:intergenic 45.0%
TTATTGAAACAGGGCCCTGA+TGG - chr5_2:60301989-60302008 None:intergenic 45.0%
!! CAGCATTGACACTTAAAGCC+TGG + chr5_2:60302328-60302347 Msa0779130:intron 45.0%
! GCATTGACACTTAAAGCCTG+GGG + chr5_2:60302330-60302349 Msa0779130:intron 45.0%
! GATCCAGTATTGGGTGATGA+AGG + chr5_2:60302471-60302490 Msa0779130:CDS 45.0%
GCTTTATGTTCCACAAGAGC+TGG + chr5_2:60302497-60302516 Msa0779130:CDS 45.0%
TTCTGCTTCAAACTGGTTGG+GGG - chr5_2:60302830-60302849 None:intergenic 45.0%
CAGAATTACTGACAGGACTC+AGG + chr5_2:60302845-60302864 Msa0779130:CDS 45.0%
GTCCAACAGACAGAATAGAC+AGG - chr5_2:60303767-60303786 None:intergenic 45.0%
CCTTCAGAGGGAATACATAG+TGG - chr5_2:60303792-60303811 None:intergenic 45.0%
CCACTATGTATTCCCTCTGA+AGG + chr5_2:60303789-60303808 Msa0779130:intron 45.0%
GACGAGTTCATCGTGACATT+AGG - chr5_2:60304269-60304288 None:intergenic 45.0%
GATGGGAATCTTCTCCTCAT+TGG + chr5_2:60304381-60304400 Msa0779130:CDS 45.0%
CCTTTAGATGGCTTCCAATG+AGG - chr5_2:60304398-60304417 None:intergenic 45.0%
CCTCATTGGAAGCCATCTAA+AGG + chr5_2:60304395-60304414 Msa0779130:CDS 45.0%
AAGATTGAGCCCAGTCAGTT+TGG - chr5_2:60304673-60304692 None:intergenic 45.0%
TAATGTGGCCCTATGTGGTT+GGG + chr5_2:60304834-60304853 Msa0779130:intron 45.0%
TATGACTCATCCACATAGGG+TGG - chr5_2:60304899-60304918 None:intergenic 45.0%
TGACTAATAATAGCCGGTGC+AGG + chr5_2:60304938-60304957 Msa0779130:intron 45.0%
GGAGATGGACATACTCACTT+AGG + chr5_2:60304962-60304981 Msa0779130:intron 45.0%
ATACTTCAGTGTTTCCGCCA+TGG - chr5_2:60305433-60305452 None:intergenic 45.0%
AGGATTTCCCTGCACACAAA+AGG - chr5_2:60305573-60305592 None:intergenic 45.0%
! GCGTTCATTTGGAGCCATAA+AGG + chr5_2:60305709-60305728 Msa0779130:intron 45.0%
CACACAGACATTGCTTCAAG+TGG - chr5_2:60305744-60305763 None:intergenic 45.0%
CACTTGAAGCAATGTCTGTG+TGG + chr5_2:60305742-60305761 Msa0779130:intron 45.0%
! TTTTAATGCTGGCAGGGAAC+AGG + chr5_2:60306026-60306045 Msa0779130:intron 45.0%
!! TTATTATTATTATAATAGTA+AGG + chr5_2:60301600-60301619 Msa0779130:intron 5.0%
!!! TAGATATTTTTTTTTATAAT+AGG + chr5_2:60301862-60301881 Msa0779130:intron 5.0%
!! AAAAAATAAATAAAGAATAT+CGG + chr5_2:60306737-60306756 Msa0779130:three_prime_UTR 5.0%
!!! AACGTTGCGGTTTTGGGTAG+AGG - chr5_2:60298197-60298216 None:intergenic 50.0%
GGTTTCGGAAGGAAGAGCTA+AGG - chr5_2:60298448-60298467 None:intergenic 50.0%
! GGTTGACTTCACAAATCGCG+AGG - chr5_2:60299360-60299379 None:intergenic 50.0%
ACTGCCGCCAACCCAATAAT+TGG + chr5_2:60299573-60299592 Msa0779130:intron 50.0%
CGCGTGTTAGAAGTGGAAAG+CGG - chr5_2:60299836-60299855 None:intergenic 50.0%
AAAATCAGGACAACCGCACC+AGG - chr5_2:60299888-60299907 None:intergenic 50.0%
ATGGAGCAAAGCTGAACTCG+TGG - chr5_2:60300161-60300180 None:intergenic 50.0%
GCAAGCCGCTATTATGACAC+TGG + chr5_2:60300484-60300503 Msa0779130:intron 50.0%
!! GTCTTTCCAGTTGGTGGGTA+AGG + chr5_2:60300569-60300588 Msa0779130:intron 50.0%
TAATAGGGTGGCCAAGTGTG+TGG - chr5_2:60300637-60300656 None:intergenic 50.0%
GGGGTTTATTGAGCGAAGCT+TGG - chr5_2:60300825-60300844 None:intergenic 50.0%
GTGCTGAAATCGTGAGTTGC+CGG + chr5_2:60301126-60301145 Msa0779130:intron 50.0%
TGAAATCGTGAGTTGCCGGT+GGG + chr5_2:60301130-60301149 Msa0779130:intron 50.0%
AGGGAAGAGAGAGTCACAGA+TGG - chr5_2:60301274-60301293 None:intergenic 50.0%
! CCCTTTTACCCAGTACAGCT+TGG + chr5_2:60301358-60301377 Msa0779130:intron 50.0%
CCCAAGCTGTACTGGGTAAA+AGG - chr5_2:60301362-60301381 None:intergenic 50.0%
ACCACAAGGCTGTAACAACG+GGG + chr5_2:60301830-60301849 Msa0779130:intron 50.0%
ATCCTGCATAGGATCAGGAG+GGG - chr5_2:60301935-60301954 None:intergenic 50.0%
GATCCTGCATAGGATCAGGA+GGG - chr5_2:60301936-60301955 None:intergenic 50.0%
AGATCCTGCATAGGATCAGG+AGG - chr5_2:60301937-60301956 None:intergenic 50.0%
ACTGGATTTGGGGGTCTGTT+TGG - chr5_2:60302264-60302283 None:intergenic 50.0%
TACACTGTCACCAGCTCTTG+TGG - chr5_2:60302510-60302529 None:intergenic 50.0%
GGATCAGTCTTACCCTCTCA+CGG - chr5_2:60302533-60302552 None:intergenic 50.0%
GGGGTCAACATTGAAGCGAT+TGG - chr5_2:60302811-60302830 None:intergenic 50.0%
TCATGCAGCTGGACCTTCAA+AGG + chr5_2:60303867-60303886 Msa0779130:CDS 50.0%
!!! TGGCCGGTTCCTCCATTTTT+TGG - chr5_2:60304702-60304721 None:intergenic 50.0%
!! AGGAACCGGCCAGTCTTATT+TGG + chr5_2:60304710-60304729 Msa0779130:intron 50.0%
!! ACCGGCCAGTCTTATTTGGT+TGG + chr5_2:60304714-60304733 Msa0779130:intron 50.0%
GCCAACCAAATAAGACTGGC+CGG - chr5_2:60304718-60304737 None:intergenic 50.0%
TGACTCTACGCTAGCTGGTT+TGG - chr5_2:60304776-60304795 None:intergenic 50.0%
GTAATGTGGCCCTATGTGGT+TGG + chr5_2:60304833-60304852 Msa0779130:intron 50.0%
CTAATAATAGCCGGTGCAGG+TGG + chr5_2:60304941-60304960 Msa0779130:intron 50.0%
ACTTAGGGAGTTTGAGGAGC+AGG + chr5_2:60304978-60304997 Msa0779130:intron 50.0%
TCCAAATGAACGCTGCCACT+CGG - chr5_2:60305702-60305721 None:intergenic 50.0%
CTCATGACCGCACTTCTTCT+CGG + chr5_2:60306053-60306072 Msa0779130:CDS 50.0%
! GTGGACTGCGGATATCATCT+TGG - chr5_2:60306539-60306558 None:intergenic 50.0%
! AGTACTCGACCGGTTTCGGA+AGG - chr5_2:60298459-60298478 None:intergenic 55.0%
! GCTGAGTACTCGACCGGTTT+CGG - chr5_2:60298463-60298482 None:intergenic 55.0%
TGCTTGCTTGCTTGCCTGTG+TGG - chr5_2:60298970-60298989 None:intergenic 55.0%
!! CGCGCCAATTATTGGGTTGG+CGG - chr5_2:60299580-60299599 None:intergenic 55.0%
CGCCAACCCAATAATTGGCG+CGG + chr5_2:60299578-60299597 Msa0779130:intron 55.0%
CACCGCGCCAATTATTGGGT+TGG - chr5_2:60299583-60299602 None:intergenic 55.0%
ACCCAATAATTGGCGCGGTG+CGG + chr5_2:60299583-60299602 Msa0779130:intron 55.0%
GAAGTGGAAAGCGGCCAAAG+CGG - chr5_2:60299827-60299846 None:intergenic 55.0%
CGGAGCAGAGCGGAAAAATC+AGG - chr5_2:60299902-60299921 None:intergenic 55.0%
ACACAGCCTTACCCACCAAC+TGG - chr5_2:60300578-60300597 None:intergenic 55.0%
GATCCTACGATCCTACGAGG+AGG - chr5_2:60301045-60301064 None:intergenic 55.0%
TCATGGTTCCGTGCTGCGAT+GGG + chr5_2:60301078-60301097 Msa0779130:intron 55.0%
CTGAAATCGTGAGTTGCCGG+TGG + chr5_2:60301129-60301148 Msa0779130:intron 55.0%
GAAATCGTGAGTTGCCGGTG+GGG + chr5_2:60301131-60301150 Msa0779130:intron 55.0%
CTTCATGCACACAACCCCAC+CGG - chr5_2:60301148-60301167 None:intergenic 55.0%
! TCACAGATGGTGACGCAAGG+AGG - chr5_2:60301261-60301280 None:intergenic 55.0%
! GAGTCACAGATGGTGACGCA+AGG - chr5_2:60301264-60301283 None:intergenic 55.0%
GTCCTCACAGCCAAACCACA+AGG + chr5_2:60301816-60301835 Msa0779130:intron 55.0%
! AGCCTTGTGGTTTGGCTGTG+AGG - chr5_2:60301821-60301840 None:intergenic 55.0%
TCCCCGTTGTTACAGCCTTG+TGG - chr5_2:60301834-60301853 None:intergenic 55.0%
TCCTGCATAGGATCAGGAGG+GGG - chr5_2:60301934-60301953 None:intergenic 55.0%
TGGTGACAGTGTACCGTGAG+AGG + chr5_2:60302517-60302536 Msa0779130:CDS 55.0%
GGTGACAGTGTACCGTGAGA+GGG + chr5_2:60302518-60302537 Msa0779130:CDS 55.0%
ATGTCCATCTCCACCTGCAC+CGG - chr5_2:60304954-60304973 None:intergenic 55.0%
TCCGAGTGGCAGCGTTCATT+TGG + chr5_2:60305698-60305717 Msa0779130:intron 55.0%
TGACCGCACTTCTTCTCGGT+TGG + chr5_2:60306057-60306076 Msa0779130:CDS 55.0%
GCTCCAACCGAGAAGAAGTG+CGG - chr5_2:60306063-60306082 None:intergenic 55.0%
ACACCCGGACAACCTTGAGA+AGG + chr5_2:60306189-60306208 Msa0779130:CDS 55.0%
CAGCCTTCTCAAGGTTGTCC+GGG - chr5_2:60306195-60306214 None:intergenic 55.0%
GCAGCCTTCTCAAGGTTGTC+CGG - chr5_2:60306196-60306215 None:intergenic 55.0%
CGAGTTCTGCAGCCTTCTCA+AGG - chr5_2:60306204-60306223 None:intergenic 55.0%
TGAGAAGGCTGCAGAACTCG+CGG + chr5_2:60306204-60306223 Msa0779130:CDS 55.0%
ACTCGCGGTATCAAGCGTAC+AGG + chr5_2:60306219-60306238 Msa0779130:CDS 55.0%
GCGTGTGCGCGAATCTAGCT+TGG - chr5_2:60298315-60298334 None:intergenic 60.0%
CCCGCACCGCGCCAATTATT+GGG - chr5_2:60299587-60299606 None:intergenic 60.0%
CCCAATAATTGGCGCGGTGC+GGG + chr5_2:60299584-60299603 Msa0779130:intron 60.0%
TCCCGCACCGCGCCAATTAT+TGG - chr5_2:60299588-60299607 None:intergenic 60.0%
! GTGTCGGCGCGTGTTAGAAG+TGG - chr5_2:60299843-60299862 None:intergenic 60.0%
! GCTGCTATAGCGGAGCAGAG+CGG - chr5_2:60299912-60299931 None:intergenic 60.0%
CTCTGCTCCGCTATAGCAGC+CGG + chr5_2:60299912-60299931 Msa0779130:intron 60.0%
TACCTTCCCCAGACACCACC+TGG + chr5_2:60300603-60300622 Msa0779130:intron 60.0%
TTCCCCAGACACCACCTGGT+GGG + chr5_2:60300607-60300626 Msa0779130:intron 60.0%
GCTCGCGGTCTTGACTACAC+TGG - chr5_2:60301023-60301042 None:intergenic 60.0%
GAGCCTCCTCGTAGGATCGT+AGG + chr5_2:60301039-60301058 Msa0779130:intron 60.0%
GTCATGGTTCCGTGCTGCGA+TGG + chr5_2:60301077-60301096 Msa0779130:intron 60.0%
ATCCTGGTCCCATCGCAGCA+CGG - chr5_2:60301089-60301108 None:intergenic 60.0%
TGCGATGGGACCAGGATCAC+TGG + chr5_2:60301092-60301111 Msa0779130:intron 60.0%
GTGGTGCACTCCAGTGATCC+TGG - chr5_2:60301105-60301124 None:intergenic 60.0%
! GGGGAAGTGTGGAGTCGGAA+CGG + chr5_2:60301778-60301797 Msa0779130:intron 60.0%
! GGGAAGTGTGGAGTCGGAAC+GGG + chr5_2:60301779-60301798 Msa0779130:intron 60.0%
ACCCCCTCCTGATCCTATGC+AGG + chr5_2:60301930-60301949 Msa0779130:intron 60.0%
GGTACACACATGGCAGCACC+AGG + chr5_2:60304160-60304179 Msa0779130:intron 60.0%
ACACACATGGCAGCACCAGG+AGG + chr5_2:60304163-60304182 Msa0779130:intron 60.0%
GGACATGGGTCAACTCCTCC+TGG - chr5_2:60304181-60304200 None:intergenic 60.0%
ATAGCCGGTGCAGGTGGAGA+TGG + chr5_2:60304947-60304966 Msa0779130:intron 60.0%
TAATTGGCGCGGTGCGGGAG+CGG + chr5_2:60299589-60299608 Msa0779130:intron 65.0%
!! GCGCGTAGCGGGCGCTATTT+CGG + chr5_2:60299613-60299632 Msa0779130:intron 65.0%
!! CGTAGCGGGCGCTATTTCGG+TGG + chr5_2:60299616-60299635 Msa0779130:intron 65.0%
! CGGGCGCTATTTCGGTGGTG+CGG + chr5_2:60299621-60299640 Msa0779130:intron 65.0%
ACAACCGCACCAGGCCACGT+GGG - chr5_2:60299879-60299898 None:intergenic 65.0%
GTTGTCAATAGCGGCCGCGC+CGG - chr5_2:60299934-60299953 None:intergenic 65.0%
CACCAGGTGGTGTCTGGGGA+AGG - chr5_2:60300608-60300627 None:intergenic 65.0%
CTTCCCCAGACACCACCTGG+TGG + chr5_2:60300606-60300625 Msa0779130:intron 65.0%
CTCCCACCAGGTGGTGTCTG+GGG - chr5_2:60300612-60300631 None:intergenic 65.0%
GCTCCCACCAGGTGGTGTCT+GGG - chr5_2:60300613-60300632 None:intergenic 65.0%
AAGTGTGTGGCGCTCCCACC+AGG - chr5_2:60300624-60300643 None:intergenic 65.0%
!! TGGTGGGAGCGCCACACACT+TGG + chr5_2:60300623-60300642 Msa0779130:intron 65.0%
AAGACCGCGAGCCTCCTCGT+AGG + chr5_2:60301031-60301050 Msa0779130:intron 65.0%
CGATCCTACGAGGAGGCTCG+CGG - chr5_2:60301038-60301057 None:intergenic 65.0%
TTCCGTGCTGCGATGGGACC+AGG + chr5_2:60301084-60301103 Msa0779130:intron 65.0%
ACACACGGGGAGGGGAAGTG+TGG + chr5_2:60301767-60301786 Msa0779130:intron 65.0%
! GGGGAGGGGAAGTGTGGAGT+CGG + chr5_2:60301773-60301792 Msa0779130:intron 65.0%
AATTGGCGCGGTGCGGGAGC+GGG + chr5_2:60299590-60299609 Msa0779130:intron 70.0%
GGGCGGGTGTCAGGCTGTGT+CGG - chr5_2:60299859-60299878 None:intergenic 70.0%
GACAACCGCACCAGGCCACG+TGG - chr5_2:60299880-60299899 None:intergenic 70.0%
CTCCGCTATAGCAGCCGGCG+CGG + chr5_2:60299917-60299936 Msa0779130:intron 70.0%
CGCTCCCACCAGGTGGTGTC+TGG - chr5_2:60300614-60300633 None:intergenic 70.0%
TGTGTGGCGCTCCCACCAGG+TGG - chr5_2:60300621-60300640 None:intergenic 70.0%
ATTGGCGCGGTGCGGGAGCG+GGG + chr5_2:60299591-60299610 Msa0779130:intron 75.0%
CAGCCTGACACCCGCCCACG+TGG + chr5_2:60299862-60299881 Msa0779130:intron 75.0%
AGGCCACGTGGGCGGGTGTC+AGG - chr5_2:60299868-60299887 None:intergenic 75.0%
TGACACCCGCCCACGTGGCC+TGG + chr5_2:60299867-60299886 Msa0779130:intron 75.0%
ACCGCACCAGGCCACGTGGG+CGG - chr5_2:60299876-60299895 None:intergenic 75.0%
!! GGCCGCGCCGGCTGCTATAG+CGG - chr5_2:60299922-60299941 None:intergenic 75.0%
! TGCGGGAGCGGGGCGCGTAG+CGG + chr5_2:60299601-60299620 Msa0779130:intron 80.0%
! CCGCACCAGGCCACGTGGGC+GGG - chr5_2:60299875-60299894 None:intergenic 80.0%
! CCCGCCCACGTGGCCTGGTG+CGG + chr5_2:60299872-60299891 Msa0779130:intron 80.0%
! GCGGGAGCGGGGCGCGTAGC+GGG + chr5_2:60299602-60299621 Msa0779130:intron 85.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 60298029 60306855 60298029 ID=Msa0779130;Name=Msa0779130
chr5_2 mRNA 60298029 60306855 60298029 ID=Msa0779130-mRNA-1;Parent=Msa0779130;Name=Msa0779130-mRNA-1;_AED=0.15;_eAED=0.15;_QI=150|1|1|1|0.91|0.84|13|265|354
chr5_2 exon 60298029 60298293 60298029 ID=Msa0779130-mRNA-1:exon:17621;Parent=Msa0779130-mRNA-1
chr5_2 exon 60298403 60298503 60298403 ID=Msa0779130-mRNA-1:exon:17622;Parent=Msa0779130-mRNA-1
chr5_2 exon 60298881 60298974 60298881 ID=Msa0779130-mRNA-1:exon:17623;Parent=Msa0779130-mRNA-1
chr5_2 exon 60299182 60299286 60299182 ID=Msa0779130-mRNA-1:exon:17624;Parent=Msa0779130-mRNA-1
chr5_2 exon 60300774 60300857 60300774 ID=Msa0779130-mRNA-1:exon:17625;Parent=Msa0779130-mRNA-1
chr5_2 exon 60302466 60302539 60302466 ID=Msa0779130-mRNA-1:exon:17626;Parent=Msa0779130-mRNA-1
chr5_2 exon 60302802 60302866 60302802 ID=Msa0779130-mRNA-1:exon:17627;Parent=Msa0779130-mRNA-1
chr5_2 exon 60303825 60303888 60303825 ID=Msa0779130-mRNA-1:exon:17628;Parent=Msa0779130-mRNA-1
chr5_2 exon 60304357 60304422 60304357 ID=Msa0779130-mRNA-1:exon:17629;Parent=Msa0779130-mRNA-1
chr5_2 exon 60305584 60305640 60305584 ID=Msa0779130-mRNA-1:exon:17630;Parent=Msa0779130-mRNA-1
chr5_2 exon 60306041 60306085 60306041 ID=Msa0779130-mRNA-1:exon:17631;Parent=Msa0779130-mRNA-1
chr5_2 exon 60306187 60306240 60306187 ID=Msa0779130-mRNA-1:exon:17632;Parent=Msa0779130-mRNA-1
chr5_2 exon 60306450 60306855 60306450 ID=Msa0779130-mRNA-1:exon:17633;Parent=Msa0779130-mRNA-1
chr5_2 five_prime_UTR 60298029 60298178 60298029 ID=Msa0779130-mRNA-1:five_prime_utr;Parent=Msa0779130-mRNA-1
chr5_2 CDS 60298179 60298293 60298179 ID=Msa0779130-mRNA-1:cds;Parent=Msa0779130-mRNA-1
chr5_2 CDS 60298403 60298503 60298403 ID=Msa0779130-mRNA-1:cds;Parent=Msa0779130-mRNA-1
chr5_2 CDS 60298881 60298974 60298881 ID=Msa0779130-mRNA-1:cds;Parent=Msa0779130-mRNA-1
chr5_2 CDS 60299182 60299286 60299182 ID=Msa0779130-mRNA-1:cds;Parent=Msa0779130-mRNA-1
chr5_2 CDS 60300774 60300857 60300774 ID=Msa0779130-mRNA-1:cds;Parent=Msa0779130-mRNA-1
chr5_2 CDS 60302466 60302539 60302466 ID=Msa0779130-mRNA-1:cds;Parent=Msa0779130-mRNA-1
chr5_2 CDS 60302802 60302866 60302802 ID=Msa0779130-mRNA-1:cds;Parent=Msa0779130-mRNA-1
chr5_2 CDS 60303825 60303888 60303825 ID=Msa0779130-mRNA-1:cds;Parent=Msa0779130-mRNA-1
chr5_2 CDS 60304357 60304422 60304357 ID=Msa0779130-mRNA-1:cds;Parent=Msa0779130-mRNA-1
chr5_2 CDS 60305584 60305640 60305584 ID=Msa0779130-mRNA-1:cds;Parent=Msa0779130-mRNA-1
chr5_2 CDS 60306041 60306085 60306041 ID=Msa0779130-mRNA-1:cds;Parent=Msa0779130-mRNA-1
chr5_2 CDS 60306187 60306240 60306187 ID=Msa0779130-mRNA-1:cds;Parent=Msa0779130-mRNA-1
chr5_2 CDS 60306450 60306590 60306450 ID=Msa0779130-mRNA-1:cds;Parent=Msa0779130-mRNA-1
chr5_2 three_prime_UTR 60306591 60306855 60306591 ID=Msa0779130-mRNA-1:three_prime_utr;Parent=Msa0779130-mRNA-1
Gene Sequence

>Msa0779130

ATGATTCATCATCTACCTCTACCCAAAACCGCAACGTTACTCCATTCTTTCTACACACTCAATCCCAACCCCTTCCAGATTTTCATTTTCCCCAGAAGAAACTCATTATTTTCCGATTCAACGAAGAGGAATTCATCAATGGCGCCTCCGATTCTTTCCTTAGCTCTTCCTTCCGAAACCGGTCGAGTACTCAGCATTCAATCTCACACTGTTCAGGGTTATGTTGGAAATAAATCGGCTGTTTTTCCTCTGCAACTTTTGGGCTATGATGTTGATCCAATTAATTCCGTGCAGTTTTCAAACCACACAGGGTATCCATCTTTTAAGGGCCAGGTTTTAAATGGACAGCAACTCTGGGATCTAATTGAAGGCCTTGAAGCCAATGATTTATTGTACTATACTCACTTATTAACAGGTTATATTGGTTCAGTTTCTTTTCTCAACACAGTATTGGATGTTGTCTCCAAGCTTCGCTCAATAAACCCCAAGCTTACATATGTATGTGATCCAGTATTGGGTGATGAAGGAAAGCTTTATGTTCCACAAGAGCTGGTGACAGTGTACCGTGAGAGGGTTGTTCCAATCGCTTCAATGTTGACCCCCAACCAGTTTGAAGCAGAATTACTGACAGGACTCAGGATTCAGTCTGAAGAAGATGGCCGAGAAGCTTGTAACTCAATTCATGCAGCTGGACCTTCAAAGGTTGTAATTACAAGTATAAATGTAGATGGGAATCTTCTCCTCATTGGAAGCCATCTAAAGGAAAAGGGAAATCCTCCCAAACAATTTAAGATTGCAATTCCCAAAATACCAGCTTATTTTACGGGAACAGGAGATCTCATGACCGCACTTCTTCTCGGTTGGAGCAATAAACACCCGGACAACCTTGAGAAGGCTGCAGAACTCGCGGTATCAAGCGTACAGGCACTTTTGCAAAGGACACTTGATGATTACAAAAGTGCTGGACATGATCCCAAATCATCCAGTTTAGAGATCAGGTTAATTCAGAGCCAAGATGATATCCGCAGTCCACAAATCACATTCAAAGCTGAAATATACAGCTAA

Protein sequence

>Msa0779130

MIHHLPLPKTATLLHSFYTLNPNPFQIFIFPRRNSLFSDSTKRNSSMAPPILSLALPSETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPINSVQFSNHTGYPSFKGQVLNGQQLWDLIEGLEANDLLYYTHLLTGYIGSVSFLNTVLDVVSKLRSINPKLTYVCDPVLGDEGKLYVPQELVTVYRERVVPIASMLTPNQFEAELLTGLRIQSEEDGREACNSIHAAGPSKVVITSINVDGNLLLIGSHLKEKGNPPKQFKIAIPKIPAYFTGTGDLMTALLLGWSNKHPDNLEKAAELAVSSVQALLQRTLDDYKSAGHDPKSSSLEIRLIQSQDDIRSPQITFKAEIYS*