AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0861720

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0861720 MtrunA17_Chr5g0442091 93.169 366 8 1 1 366 1 349 0.0 687
Msa0861720 MtrunA17_Chr4g0037541 63.636 319 97 3 1 319 1 300 9.68e-143 408
Msa0861720 MtrunA17_Chr2g0277341 62.422 322 103 2 2 323 12 315 1.82e-140 402
Msa0861720 MtrunA17_Chr8g0385101 55.096 363 141 6 3 364 1 342 4.41e-132 381
Msa0861720 MtrunA17_Chr3g0130971 54.545 363 140 6 4 364 3 342 1.75e-130 377
Msa0861720 MtrunA17_Chr8g0378181 59.365 315 110 2 1 315 1 297 2.82e-128 370
Msa0861720 MtrunA17_Chr3g0121551 54.986 351 132 3 1 351 1 325 3.55e-124 360
Msa0861720 MtrunA17_Chr5g0421601 95.522 67 3 0 300 366 118 184 2.57e-39 138
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0861720 AT1G71900.1 64.062 320 97 2 2 321 14 315 3.50e-148 422
Msa0861720 AT1G71900.2 64.968 314 92 2 2 315 14 309 1.16e-147 421
Msa0861720 AT1G34470.1 58.038 367 119 4 2 358 14 355 2.64e-146 419
Msa0861720 AT2G21120.1 62.069 319 103 2 3 321 1 301 1.67e-143 410
Msa0861720 AT4G38730.1 62.382 319 102 2 5 323 3 303 6.54e-142 405
Msa0861720 AT4G09640.1 56.452 372 134 3 2 363 14 367 1.08e-138 400
Msa0861720 AT4G13800.5 59.317 322 113 2 3 324 4 307 1.28e-122 357
Msa0861720 AT4G13800.1 59.317 322 113 2 3 324 4 307 1.28e-122 357
Msa0861720 AT4G13800.8 59.317 322 113 2 3 324 4 307 1.28e-122 357
Msa0861720 AT4G13800.10 59.317 322 113 2 3 324 4 307 1.28e-122 357
Msa0861720 AT3G23870.1 57.864 337 122 3 3 339 4 320 1.57e-117 344
Msa0861720 AT3G23870.3 57.864 337 122 3 3 339 4 320 1.57e-117 344
Msa0861720 AT3G23870.2 57.864 337 122 3 3 339 4 320 1.57e-117 344
Msa0861720 AT3G23870.4 57.864 337 122 3 3 339 4 320 1.57e-117 344
Msa0861720 AT4G13800.6 60.142 281 94 2 3 283 4 266 3.95e-105 310
Msa0861720 AT4G13800.2 60.142 281 94 2 3 283 4 266 3.95e-105 310
Msa0861720 AT3G23870.5 55.085 236 104 1 105 340 8 241 1.85e-88 267
Msa0861720 AT4G13800.9 56.693 254 92 2 3 256 4 239 4.74e-85 258
Msa0861720 AT4G13800.7 56.693 254 92 2 3 256 4 239 4.74e-85 258
Msa0861720 AT4G13800.4 56.693 254 92 2 3 256 4 239 4.74e-85 258
Msa0861720 AT4G13800.3 56.693 254 92 2 3 256 4 239 4.74e-85 258

Find 110 sgRNAs with CRISPR-Local

Find 584 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCATTTGTATGATATTTA+AGG 0.097719 5_4:+61151345 None:intergenic
ATTAGTACTGGTCTTCTTTA+TGG 0.100334 5_4:-61156625 Msa0861720:CDS
ACATAGTAAAGGTCTTAATT+AGG 0.230023 5_4:-61151586 Msa0861720:three_prime_UTR
GTTTACAACACTTACAATAT+TGG 0.253214 5_4:-61152106 Msa0861720:CDS
CAGCTTCTACTTATGGTGTT+AGG 0.261659 5_4:-61158862 Msa0861720:CDS
AAGTAACGAGTCCCCATTTC+CGG 0.270372 5_4:+61151685 None:intergenic
CGAAGAGCAGCTTCTACTTA+TGG 0.293461 5_4:-61158869 Msa0861720:CDS
CTACACAAGCTTGGGATATT+AGG 0.300602 5_4:-61156854 Msa0861720:CDS
AAGACAAGATTTATGTTAGA+TGG 0.308492 5_4:-61151618 Msa0861720:exon
CATAGTAAAGGTCTTAATTA+GGG 0.322411 5_4:-61151585 Msa0861720:three_prime_UTR
GGAAACCTCCCATCATTCTA+TGG 0.322905 5_4:+61151483 None:intergenic
GGCTGTGTGATGTGCATTGC+TGG 0.328079 5_4:-61156833 Msa0861720:CDS
GCAAATGAATTATCTTAATA+AGG 0.345795 5_4:-61154918 Msa0861720:intron
GGATCCTATCACATCTGTTC+TGG 0.346198 5_4:-61156777 Msa0861720:CDS
GTAGCCTCTCTTTCAGAATA+AGG 0.347068 5_4:+61156873 None:intergenic
TCACATCTGTTCTGGAGATA+TGG 0.347426 5_4:-61156769 Msa0861720:CDS
TACAGGCATTTGTTCGTTGA+TGG 0.351251 5_4:-61156556 Msa0861720:CDS
TTTCCGAAGCTATTCTTTCA+TGG 0.353351 5_4:-61151465 Msa0861720:three_prime_UTR
TGTTCTGGAGATATGGAATA+TGG 0.361007 5_4:-61156762 Msa0861720:CDS
GTCCGGCTTTATACCGGAAA+TGG 0.364120 5_4:-61151698 Msa0861720:CDS
GGGGAAGTTGAACCTTTCTC+TGG 0.368697 5_4:-61151565 Msa0861720:three_prime_UTR
GTTAGAACAGTATACATATA+TGG 0.369299 5_4:-61151041 Msa0861720:three_prime_UTR
ATTATCTATTGGAACCACTA+TGG 0.374691 5_4:-61158708 Msa0861720:CDS
TGGTGGTTATTATTATCTAT+TGG 0.385041 5_4:-61158719 Msa0861720:CDS
CTTGTGTTAGATAAGGTCAT+TGG 0.390659 5_4:-61151170 Msa0861720:three_prime_UTR
AGCTTCTACTTATGGTGTTA+GGG 0.400202 5_4:-61158861 Msa0861720:CDS
GTCCACATGTTGGTGCAAAA+TGG 0.400233 5_4:+61156598 None:intergenic
CTTAAATATCATACAAATGA+TGG 0.404549 5_4:-61151344 Msa0861720:three_prime_UTR
GGCTTTATTGTTGTACTCTC+TGG 0.408321 5_4:-61151912 Msa0861720:CDS
TTGGCTTCAAGTTTGTTCAT+TGG 0.409503 5_4:-61158923 Msa0861720:CDS
GTCTCTTGTTCAGTGATTGT+AGG 0.414325 5_4:-61157098 Msa0861720:CDS
CTGTCGAATGAGAATGTAAC+AGG 0.424243 5_4:-61158959 Msa0861720:CDS
GTGTAAAATGTTTACATTGA+CGG 0.424794 5_4:-61151304 Msa0861720:three_prime_UTR
TACCTGCAGCTGCATGGTAT+TGG 0.427904 5_4:+61151515 None:intergenic
TCCGGCTTTATACCGGAAAT+GGG 0.432544 5_4:-61151697 Msa0861720:CDS
TCATTCAGTTTCCCAGAGAA+AGG 0.435445 5_4:+61151553 None:intergenic
CTTCGCCTACATTATCTGTC+CGG 0.448386 5_4:-61151715 Msa0861720:CDS
CATTTGCATGACGACGCATA+TGG 0.451964 5_4:+61154934 None:intergenic
GTAAACATGACATAGTATAT+AGG 0.454607 5_4:+61152123 None:intergenic
TGACTATACCTCTAAAAGAA+TGG 0.455862 5_4:+61151850 None:intergenic
TACAAATGATGGTTTGTGAT+TGG 0.457526 5_4:-61151333 Msa0861720:three_prime_UTR
AAATGGGGACTCGTTACTTA+AGG 0.466808 5_4:-61151681 Msa0861720:CDS
TGTTATTCACGCTCCTAAAG+AGG 0.469561 5_4:-61156798 Msa0861720:CDS
ACAGGCATTTGTTCGTTGAT+GGG 0.472317 5_4:-61156555 Msa0861720:CDS
AAAGAGAGGCTACACAAGCT+TGG 0.474294 5_4:-61156863 Msa0861720:CDS
TCTACTTATGGTGTTAGGGC+TGG 0.477637 5_4:-61158857 Msa0861720:intron
TGTTGGGTCTGTATTAGTAC+TGG 0.480988 5_4:-61156637 Msa0861720:CDS
GATGTGATAGGATCCTCTTT+AGG 0.489032 5_4:+61156785 None:intergenic
AAGAGAGGCTACACAAGCTT+GGG 0.489256 5_4:-61156862 Msa0861720:CDS
TTGTTCAGTGATTGTAGGAG+AGG 0.490221 5_4:-61157093 Msa0861720:CDS
AATCCATGAAAGAATAGCTT+CGG 0.490859 5_4:+61151462 None:intergenic
ACCAATGTCCTAGTTTATAC+AGG 0.491498 5_4:-61156573 Msa0861720:CDS
TTATCTGTCCGGCTTTATAC+CGG 0.492952 5_4:-61151704 Msa0861720:CDS
GGCCAGTGTAATAATGTTCA+AGG 0.493910 5_4:-61152085 Msa0861720:intron
TCAGTTGCTTGTGTTAGATA+AGG 0.494218 5_4:-61151177 Msa0861720:three_prime_UTR
ACAGATAATGTAGGCGAAGA+AGG 0.506215 5_4:+61151719 None:intergenic
AGACACGATTGCCGTGTTGA+AGG 0.510435 5_4:+61152146 None:intergenic
ATCTCCAGAACAGATGTGAT+AGG 0.510534 5_4:+61156773 None:intergenic
GTAATGTAACCATAGAATGA+TGG 0.511764 5_4:-61151492 Msa0861720:three_prime_UTR
ATGGCTTCTCTCGAAGTCCT+TGG 0.513416 5_4:+61151869 None:intergenic
CTTCTTGAGCACATATCCTC+AGG 0.515556 5_4:+61151638 None:intergenic
CAGCATTCCTAGCATATGTT+GGG 0.518958 5_4:-61156653 Msa0861720:CDS
GTGATGAGCGTCAAAGCACT+TGG 0.521136 5_4:-61155034 Msa0861720:CDS
TGGAATATGGCTACTCAACC+AGG 0.522439 5_4:-61156749 Msa0861720:intron
GCCTGTATAAACTAGGACAT+TGG 0.522841 5_4:+61156572 None:intergenic
TGTCAATCAATCATAACCAT+TGG 0.523291 5_4:-61151401 Msa0861720:three_prime_UTR
GCAGCATTCCTAGCATATGT+TGG 0.523980 5_4:-61156654 Msa0861720:intron
TACCAATACCATGCAGCTGC+AGG 0.525833 5_4:-61151517 Msa0861720:three_prime_UTR
ACTATTATGTCAGAAATATG+TGG 0.525899 5_4:-61151933 Msa0861720:CDS
TGCATGGTATTGGTATATGA+TGG 0.529108 5_4:+61151525 None:intergenic
TGGAACCACTATGGTGGGTA+GGG 0.529900 5_4:-61158699 Msa0861720:CDS
GAGGAACCTCGTTTGTCTGT+CGG 0.530447 5_4:-61159046 Msa0861720:five_prime_UTR
TAGCATACAAGATTCATTTG+TGG 0.531026 5_4:-61150971 Msa0861720:three_prime_UTR
GCTGTTCTAGTTACCCCTCT+CGG 0.535516 5_4:-61157038 Msa0861720:CDS
AACAGGTCTCATTCTAGCGT+TGG 0.535939 5_4:-61158942 Msa0861720:CDS
TTACATTAATGAAGAAAGGG+TGG 0.540570 5_4:-61151078 Msa0861720:three_prime_UTR
CCCCATTTCCGGTATAAAGC+CGG 0.543216 5_4:+61151696 None:intergenic
TAATGTAACCATAGAATGAT+GGG 0.546490 5_4:-61151491 Msa0861720:three_prime_UTR
ATCATCCCTACCCACCATAG+TGG 0.550009 5_4:+61158694 None:intergenic
TGACATCAAACCTAGGAAGA+AGG 0.551656 5_4:+61158656 None:intergenic
TACCTTGAACATTATTACAC+TGG 0.553788 5_4:+61152083 None:intergenic
GGGAAGTTGAACCTTTCTCT+GGG 0.555737 5_4:-61151564 Msa0861720:three_prime_UTR
ATCTATTGGAACCACTATGG+TGG 0.559041 5_4:-61158705 Msa0861720:CDS
AGAGGGGTAACTAGAACAGC+AGG 0.563929 5_4:+61157041 None:intergenic
TTGGAACCACTATGGTGGGT+AGG 0.568714 5_4:-61158700 Msa0861720:CDS
ACTTAATTTACTTACAGAGA+GGG 0.571556 5_4:+61156530 None:intergenic
CTGACCTTATTCTGAAAGAG+AGG 0.576221 5_4:-61156877 Msa0861720:CDS
ATACAGACCCAACATATGCT+AGG 0.592024 5_4:+61156646 None:intergenic
TTATGCTTGCAGGATTGGGA+TGG 0.592514 5_4:-61151969 Msa0861720:intron
CATTACTACCTGCAGCTGCA+TGG 0.597952 5_4:+61151509 None:intergenic
AACAAATGCCTGTATAAACT+AGG 0.598157 5_4:+61156565 None:intergenic
TAATACTTAATGCACCGAGA+GGG 0.601192 5_4:+61157024 None:intergenic
GGCACTTGACACCTTCAACA+CGG 0.609093 5_4:-61152157 Msa0861720:CDS
AGTTAGTTTATCCACAGACA+TGG 0.613016 5_4:-61154976 Msa0861720:CDS
AATACTTAATGCACCGAGAG+GGG 0.613447 5_4:+61157025 None:intergenic
AGTTTCATTATCAAGAAACA+AGG 0.615355 5_4:-61158896 Msa0861720:CDS
TCTATTGGAACCACTATGGT+GGG 0.617869 5_4:-61158704 Msa0861720:CDS
TAAAGCCGGACAGATAATGT+AGG 0.620082 5_4:+61151710 None:intergenic
GTGCATTAAGTATTATTGTG+AGG 0.632621 5_4:-61157016 Msa0861720:intron
GCATGGTATTGGTATATGAT+GGG 0.632702 5_4:+61151526 None:intergenic
TTATCTAACACAAGCAACTG+AGG 0.641563 5_4:+61151179 None:intergenic
ATAGTAAAGGTCTTAATTAG+GGG 0.647173 5_4:-61151584 Msa0861720:three_prime_UTR
CCGGCTTTATACCGGAAATG+GGG 0.664480 5_4:-61151696 Msa0861720:CDS
TGAAGAGAACGAATCTCCTG+AGG 0.670385 5_4:-61151654 Msa0861720:CDS
AATAATGTTACATCTGACCA+AGG 0.680906 5_4:-61151886 Msa0861720:CDS
ATGATGACGATGATGATCTG+AGG 0.701667 5_4:-61159065 Msa0861720:five_prime_UTR
ACATTGGTATGTCCACATGT+TGG 0.713281 5_4:+61156588 None:intergenic
TGTAACCATAGAATGATGGG+AGG 0.716967 5_4:-61151488 Msa0861720:three_prime_UTR
ATAATACTTAATGCACCGAG+AGG 0.741263 5_4:+61157023 None:intergenic
TGAGCTCCGACAGACAAACG+AGG 0.749083 5_4:+61159040 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGTCAATTATTTTTTTATTT+CGG - chr5_4:61151367-61151386 Msa0861720:three_prime_UTR 10.0%
!!! TTTTTAATTTTTAACGATAA+AGG - chr5_4:61152726-61152745 Msa0861720:intron 10.0%
!! ATTAGATAATAAATAGTTAA+TGG + chr5_4:61153864-61153883 None:intergenic 10.0%
!! ATTAAATAGAACAAAAAATT+TGG + chr5_4:61154695-61154714 None:intergenic 10.0%
!! ATATACTAACAAATAATAAT+TGG + chr5_4:61155143-61155162 None:intergenic 10.0%
!!! TTTTTTTTTAAAATTCTTCA+AGG - chr5_4:61155675-61155694 Msa0861720:intron 10.0%
!!! GTCAATTATTTTTTTATTTC+GGG - chr5_4:61151368-61151387 Msa0861720:three_prime_UTR 15.0%
!! AATTAATTTCATACATTCAT+GGG + chr5_4:61151434-61151453 None:intergenic 15.0%
!! TAAATTAAGTTAAAGACTAA+AGG + chr5_4:61152146-61152165 None:intergenic 15.0%
!! CTTAATTTAATGTATCAAAA+AGG - chr5_4:61152157-61152176 Msa0861720:CDS 15.0%
!!! CTTTATTTGAATTTTCAAAT+AGG + chr5_4:61152780-61152799 None:intergenic 15.0%
!! AGTATAGATCAATTATTAAA+GGG + chr5_4:61153697-61153716 None:intergenic 15.0%
!! AAGTATAGATCAATTATTAA+AGG + chr5_4:61153698-61153717 None:intergenic 15.0%
!! ATTTGGTTGTTATAATAATA+AGG + chr5_4:61154595-61154614 None:intergenic 15.0%
!! AATTCAAAGAAAAACTAATT+TGG + chr5_4:61154612-61154631 None:intergenic 15.0%
!! AAAAGACAAAAAGATTATTA+AGG - chr5_4:61156496-61156515 Msa0861720:intron 15.0%
!!! TATTTCTAATTGCATATTTA+CGG - chr5_4:61157149-61157168 Msa0861720:intron 15.0%
!! GTATTAATGTGAAAAATATT+GGG + chr5_4:61157192-61157211 None:intergenic 15.0%
!! TAACATGATTATAATATTTC+AGG - chr5_4:61157743-61157762 Msa0861720:intron 15.0%
!! TAACATGATTATAATATTTC+AGG - chr5_4:61157743-61157762 Msa0861720:intron 15.0%
!! TAGTCAAATTTAATCATATA+CGG - chr5_4:61158172-61158191 Msa0861720:intron 15.0%
!!! ATTTTTACATTAATGAAGAA+AGG - chr5_4:61158923-61158942 Msa0861720:CDS 15.0%
!!! TTTTTACATTAATGAAGAAA+GGG - chr5_4:61158924-61158943 Msa0861720:CDS 15.0%
!!! TTTGGCTTTTATAATATTTA+TGG - chr5_4:61158996-61159015 Msa0861720:five_prime_UTR 15.0%
!!! TTGTTGATTATTATTATGCA+TGG - chr5_4:61151231-61151250 Msa0861720:three_prime_UTR 20.0%
!!! ATTTATTATTTTGTAGGTGT+TGG - chr5_4:61151266-61151285 Msa0861720:three_prime_UTR 20.0%
!! CAATTAATTTCATACATTCA+TGG + chr5_4:61151435-61151454 None:intergenic 20.0%
!! CATGAATGTATGAAATTAAT+TGG - chr5_4:61151433-61151452 Msa0861720:three_prime_UTR 20.0%
!!! TAAGTTGATAACAGAAATTT+AGG + chr5_4:61151649-61151668 None:intergenic 20.0%
!! ATATCTAAATTACGTCATAA+TGG - chr5_4:61152351-61152370 Msa0861720:intron 20.0%
!! GAAAATTCAAATAAAGTCAA+AGG - chr5_4:61152784-61152803 Msa0861720:intron 20.0%
!!! TTTTTTCAATGATGTTTTCA+TGG - chr5_4:61153084-61153103 Msa0861720:intron 20.0%
!!! TTTTCAAATGCCATATATTA+TGG - chr5_4:61153301-61153320 Msa0861720:intron 20.0%
!! TATCAAAGAACCATAATATA+TGG + chr5_4:61153314-61153333 None:intergenic 20.0%
!! ATATTATGGTTCTTTGATAA+CGG - chr5_4:61153315-61153334 Msa0861720:intron 20.0%
!! AAGGAATAATTGCTAAATTT+GGG + chr5_4:61153566-61153585 None:intergenic 20.0%
!!! TTTTAAACTAAATAACTCTG+AGG + chr5_4:61153734-61153753 None:intergenic 20.0%
!! TTGATATGTACAAATAATCT+TGG + chr5_4:61153788-61153807 None:intergenic 20.0%
!! TCTCTGTAATAAATAGTTAA+TGG - chr5_4:61153898-61153917 Msa0861720:intron 20.0%
!! CTTTATTCATGTGAATTTAT+TGG - chr5_4:61154218-61154237 Msa0861720:intron 20.0%
!! TTTACAACTAATAGAGAATT+AGG - chr5_4:61154248-61154267 Msa0861720:intron 20.0%
!! TTACAACTAATAGAGAATTA+GGG - chr5_4:61154249-61154268 Msa0861720:intron 20.0%
!! TTCTTAAAATTCCAACAATT+AGG + chr5_4:61154292-61154311 None:intergenic 20.0%
!!! TGAATCATAAACTATCATTT+TGG - chr5_4:61154528-61154547 Msa0861720:intron 20.0%
!! GCAAATGAATTATCTTAATA+AGG - chr5_4:61155087-61155106 Msa0861720:intron 20.0%
!! ACTAACAAATAATAATTGGA+AGG + chr5_4:61155139-61155158 None:intergenic 20.0%
!! TCACAAAAACAAAACAAAAA+AGG + chr5_4:61155568-61155587 None:intergenic 20.0%
!! TTTAATCTTTCCTATTGTTT+AGG - chr5_4:61156240-61156259 Msa0861720:intron 20.0%
!!! ATAACAAATGAGTTTTACTT+TGG - chr5_4:61156523-61156542 Msa0861720:intron 20.0%
!!! TAACAAATGAGTTTTACTTT+GGG - chr5_4:61156524-61156543 Msa0861720:intron 20.0%
!! GGTATTAATGTGAAAAATAT+TGG + chr5_4:61157193-61157212 None:intergenic 20.0%
!! TTCAATGGAAAAATAAAACA+AGG - chr5_4:61157654-61157673 Msa0861720:intron 20.0%
!! TTAGTAAAGCATAATTGATT+TGG + chr5_4:61157726-61157745 None:intergenic 20.0%
!!! CATAATTGATTTGGATATAT+AGG + chr5_4:61157801-61157820 None:intergenic 20.0%
!! TTAGTAAAGCATAATTGATT+TGG + chr5_4:61157726-61157745 None:intergenic 20.0%
!! ACATAATAGTTGAAAAACTT+TGG + chr5_4:61158062-61158081 None:intergenic 20.0%
!! ATATGAAAGAATGTAAAGTA+TGG + chr5_4:61158233-61158252 None:intergenic 20.0%
!! GTAAAAAATATTTACACTCT+TGG + chr5_4:61158582-61158601 None:intergenic 20.0%
!!! CAATATTTTTATTGATCCAA+TGG + chr5_4:61158623-61158642 None:intergenic 20.0%
!! CATCATTTGTATGATATTTA+AGG + chr5_4:61158663-61158682 None:intergenic 20.0%
!! CTTAAATATCATACAAATGA+TGG - chr5_4:61158661-61158680 Msa0861720:intron 20.0%
!!! TTCTTTTATTATCAGCATAT+CGG - chr5_4:61158743-61158762 Msa0861720:intron 20.0%
!!! ATATTTATGGTTTTGCAATT+TGG - chr5_4:61159009-61159028 Msa0861720:five_prime_UTR 20.0%
!!! AAGTAACGATTTTTTCGAAA+TGG - chr5_4:61151021-61151040 Msa0861720:three_prime_UTR 25.0%
!!! AGTAACGATTTTTTCGAAAT+GGG - chr5_4:61151022-61151041 Msa0861720:three_prime_UTR 25.0%
! AGTTTCATTATCAAGAAACA+AGG - chr5_4:61151109-61151128 Msa0861720:three_prime_UTR 25.0%
!!! TTTTTTCAGAATTCAGAAGA+AGG + chr5_4:61151196-61151215 None:intergenic 25.0%
! TGGTGGTTATTATTATCTAT+TGG - chr5_4:61151286-61151305 Msa0861720:three_prime_UTR 25.0%
! AAATAATTGACATCAAACCT+AGG + chr5_4:61151359-61151378 None:intergenic 25.0%
!! CTCTTTCAAAACTAACTTTT+AGG + chr5_4:61151493-61151512 None:intergenic 25.0%
!!! AAAAGTTAGTTTTGAAAGAG+AGG - chr5_4:61151493-61151512 Msa0861720:three_prime_UTR 25.0%
!!! AAAGTTAGTTTTGAAAGAGA+GGG - chr5_4:61151494-61151513 Msa0861720:three_prime_UTR 25.0%
! TCTGTTATCAACTTAAAGTT+AGG - chr5_4:61151654-61151673 Msa0861720:CDS 25.0%
! TTAAAGTTAGGTTTGAATCT+AGG - chr5_4:61151666-61151685 Msa0861720:CDS 25.0%
! GAGAATGTATAAAAAAACAG+AGG - chr5_4:61151795-61151814 Msa0861720:intron 25.0%
!!! GGTTTTTTTGTTTGTTACAT+TGG + chr5_4:61151881-61151900 None:intergenic 25.0%
!!! GTTCTCTGTTTTTTATCATA+TGG + chr5_4:61151902-61151921 None:intergenic 25.0%
! AGAACATGTAATGAATGAAA+GGG - chr5_4:61151917-61151936 Msa0861720:CDS 25.0%
!! TTTAGACGGTTCAAATTTTA+AGG - chr5_4:61151967-61151986 Msa0861720:intron 25.0%
!! TTAGACGGTTCAAATTTTAA+GGG - chr5_4:61151968-61151987 Msa0861720:intron 25.0%
!!! GAATCTGCAAATTTTAGTTT+AGG - chr5_4:61152102-61152121 Msa0861720:CDS 25.0%
! CCTATATGAAAAATGAAGTT+TGG + chr5_4:61152266-61152285 None:intergenic 25.0%
!!! CCAAACTTCATTTTTCATAT+AGG - chr5_4:61152263-61152282 Msa0861720:intron 25.0%
! CTTAGATAAAAGCTAAAAAG+AGG + chr5_4:61152412-61152431 None:intergenic 25.0%
!! TGGTCAATATTTGATAACAT+TGG + chr5_4:61152525-61152544 None:intergenic 25.0%
! ATGTTATCAAATATTGACCA+TGG - chr5_4:61152525-61152544 Msa0861720:intron 25.0%
! ACACAAATTTGCAACATTAA+TGG - chr5_4:61152668-61152687 Msa0861720:intron 25.0%
! ACTTGACACGAAAAAATTTA+AGG - chr5_4:61152753-61152772 Msa0861720:intron 25.0%
! GAAATCAGAAACACAAAAAT+GGG + chr5_4:61152865-61152884 None:intergenic 25.0%
! AGAAATCAGAAACACAAAAA+TGG + chr5_4:61152866-61152885 None:intergenic 25.0%
! TCAATTGAGAAAGAAAACTA+AGG + chr5_4:61153024-61153043 None:intergenic 25.0%
! TATGGCATTTGAAAAAGAAA+AGG + chr5_4:61153296-61153315 None:intergenic 25.0%
!! TATTATGGTTCTTTGATAAC+GGG - chr5_4:61153316-61153335 Msa0861720:intron 25.0%
! ACTTAATTTACTTACAGAGA+GGG + chr5_4:61153478-61153497 None:intergenic 25.0%
! TACTTAATTTACTTACAGAG+AGG + chr5_4:61153479-61153498 None:intergenic 25.0%
! GAAGGAATAATTGCTAAATT+TGG + chr5_4:61153567-61153586 None:intergenic 25.0%
!!! TGTAATAGTTGACTTTTTGA+AGG + chr5_4:61153585-61153604 None:intergenic 25.0%
! AAGTTGTGTATTTAATGCAT+TGG + chr5_4:61153612-61153631 None:intergenic 25.0%
! TAAAATTATCTCGCAAAATC+TGG - chr5_4:61154084-61154103 Msa0861720:intron 25.0%
! CTCTATTAGTTGTAAATAAG+TGG + chr5_4:61154244-61154263 None:intergenic 25.0%
! TAATCCAATATCAATTACCA+CGG - chr5_4:61154389-61154408 Msa0861720:intron 25.0%
! AAGAGAACATTAACTACTAT+AGG - chr5_4:61154454-61154473 Msa0861720:intron 25.0%
! TAATTGGTACTCAAAAATCA+CGG - chr5_4:61154729-61154748 Msa0861720:intron 25.0%
! TAACTAACAATGCACTAAAA+TGG - chr5_4:61154916-61154935 Msa0861720:intron 25.0%
!!! TCTTTGAAGTTAACTTTTGA+AGG - chr5_4:61154998-61155017 Msa0861720:CDS 25.0%
!!! CTTTGAAGTTAACTTTTGAA+GGG - chr5_4:61154999-61155018 Msa0861720:CDS 25.0%
! AAATAATAATTGGAAGGATG+GGG + chr5_4:61155133-61155152 None:intergenic 25.0%
! CAAATAATAATTGGAAGGAT+GGG + chr5_4:61155134-61155153 None:intergenic 25.0%
! ACAAATAATAATTGGAAGGA+TGG + chr5_4:61155135-61155154 None:intergenic 25.0%
! AAGAACAAAGAGAAAAAACT+AGG - chr5_4:61155267-61155286 Msa0861720:intron 25.0%
! ACTAATGTGTATTTCTCAAA+GGG + chr5_4:61155641-61155660 None:intergenic 25.0%
! AACTAATGTGTATTTCTCAA+AGG + chr5_4:61155642-61155661 None:intergenic 25.0%
! TTAAAATTCTTCAAGGTACA+TGG - chr5_4:61155682-61155701 Msa0861720:intron 25.0%
! AACAAGATTGAAGATAGTTT+AGG - chr5_4:61155713-61155732 Msa0861720:intron 25.0%
!!! AGATATGATTTATTTTGTCC+TGG - chr5_4:61155834-61155853 Msa0861720:intron 25.0%
! AAATCCACTAAATAATCCAT+TGG + chr5_4:61155895-61155914 None:intergenic 25.0%
!!! GTTCTAAAATATTAAGACAG+AGG - chr5_4:61156100-61156119 Msa0861720:intron 25.0%
!! AAACTTTCCTTTGTATTGAT+GGG + chr5_4:61156338-61156357 None:intergenic 25.0%
! AAAACTTTCCTTTGTATTGA+TGG + chr5_4:61156339-61156358 None:intergenic 25.0%
!!! ATACAAAGGAAAGTTTTAAC+AGG - chr5_4:61156342-61156361 Msa0861720:intron 25.0%
!! AACAAATGAGTTTTACTTTG+GGG - chr5_4:61156525-61156544 Msa0861720:intron 25.0%
! AGTAACTATAAAGGAGAATA+TGG - chr5_4:61156567-61156586 Msa0861720:CDS 25.0%
! ATGAGAATAATAATCGACTA+AGG - chr5_4:61156714-61156733 Msa0861720:intron 25.0%
! AATAATAATCGACTAAGGTT+TGG - chr5_4:61156719-61156738 Msa0861720:intron 25.0%
!! AATTTTTGCTAGGTATCAAA+TGG + chr5_4:61156844-61156863 None:intergenic 25.0%
!! TCATATGTACAATTTTTGCT+AGG + chr5_4:61156854-61156873 None:intergenic 25.0%
! AGAAGAATCATTGATATACA+GGG + chr5_4:61156980-61156999 None:intergenic 25.0%
! AAGAAGAATCATTGATATAC+AGG + chr5_4:61156981-61157000 None:intergenic 25.0%
!!! ATGGTTTTGCAAAATATATG+TGG - chr5_4:61157253-61157272 Msa0861720:intron 25.0%
! TTCATTTATGAGAGATACTA+GGG - chr5_4:61157313-61157332 Msa0861720:intron 25.0%
! GAAATTATGATTACTTGCAA+GGG + chr5_4:61157349-61157368 None:intergenic 25.0%
! AGAAATTATGATTACTTGCA+AGG + chr5_4:61157350-61157369 None:intergenic 25.0%
! AGTATGAGAAAACAACTAAA+AGG + chr5_4:61157434-61157453 None:intergenic 25.0%
! ATCAATCAAAGAACACTAAA+GGG + chr5_4:61157463-61157482 None:intergenic 25.0%
! AATCAATCAAAGAACACTAA+AGG + chr5_4:61157464-61157483 None:intergenic 25.0%
! CATTAATGTTGCTAGATTAA+TGG - chr5_4:61157543-61157562 Msa0861720:intron 25.0%
! GTAAACATGACATAGTATAT+AGG + chr5_4:61157885-61157904 None:intergenic 25.0%
! GTTTACAACACTTACAATAT+TGG - chr5_4:61157899-61157918 Msa0861720:intron 25.0%
!!! AAATTGCAAAAACTTGTTGA+CGG + chr5_4:61157948-61157967 None:intergenic 25.0%
!! CAAGTTTTTGCAATTTATGT+CGG - chr5_4:61157952-61157971 Msa0861720:intron 25.0%
! ACTATTATGTCAGAAATATG+TGG - chr5_4:61158072-61158091 Msa0861720:intron 25.0%
! TACATATATGTTGAAATTGC+AGG - chr5_4:61158253-61158272 Msa0861720:intron 25.0%
! AAGACAAGATTTATGTTAGA+TGG - chr5_4:61158387-61158406 Msa0861720:intron 25.0%
!!! GGTTTTATATGACATAGTAA+AGG - chr5_4:61158408-61158427 Msa0861720:intron 25.0%
! ACATAGTAAAGGTCTTAATT+AGG - chr5_4:61158419-61158438 Msa0861720:intron 25.0%
! CATAGTAAAGGTCTTAATTA+GGG - chr5_4:61158420-61158439 Msa0861720:intron 25.0%
! ATAGTAAAGGTCTTAATTAG+GGG - chr5_4:61158421-61158440 Msa0861720:intron 25.0%
! TAATGTAACCATAGAATGAT+GGG - chr5_4:61158514-61158533 Msa0861720:intron 25.0%
! GTGTAAAATGTTTACATTGA+CGG - chr5_4:61158701-61158720 Msa0861720:CDS 25.0%
!! TCTTTTATTATCAGCATATC+GGG - chr5_4:61158744-61158763 Msa0861720:intron 25.0%
! AATGTAAAAATAGCCTCAAA+AGG + chr5_4:61158914-61158933 None:intergenic 25.0%
! GTTAGAACAGTATACATATA+TGG - chr5_4:61158964-61158983 Msa0861720:CDS 25.0%
!!! CATATATGGTGATTTTGTTT+TGG - chr5_4:61158978-61158997 Msa0861720:exon 25.0%
!!! TATTATTTTGTAGGTGTTGG+TGG - chr5_4:61151269-61151288 Msa0861720:three_prime_UTR 30.0%
ATTATCTATTGGAACCACTA+TGG - chr5_4:61151297-61151316 Msa0861720:three_prime_UTR 30.0%
ATAACAGAAATTTAGGCCAA+GGG + chr5_4:61151642-61151661 None:intergenic 30.0%
GATTGTATAAGTAAGAACAG+AGG - chr5_4:61151771-61151790 Msa0861720:intron 30.0%
GAGAACATGTAATGAATGAA+AGG - chr5_4:61151916-61151935 Msa0861720:CDS 30.0%
TGTAATGAATGAAAGGGTTT+AGG - chr5_4:61151923-61151942 Msa0861720:CDS 30.0%
GTAATGAATGAAAGGGTTTA+GGG - chr5_4:61151924-61151943 Msa0861720:CDS 30.0%
! GGGTAAAATCATGATTTTCT+TGG - chr5_4:61151988-61152007 Msa0861720:intron 30.0%
! AAATCATGATTTTCTTGGAG+CGG - chr5_4:61151993-61152012 Msa0861720:intron 30.0%
GACTAATTTGACGTGAAAAA+AGG + chr5_4:61152212-61152231 None:intergenic 30.0%
!!! AGAGGTCACGTTATTTTTTA+TGG + chr5_4:61152394-61152413 None:intergenic 30.0%
! TATTTGATAACATTGGCACA+CGG + chr5_4:61152518-61152537 None:intergenic 30.0%
!! GGCTTTATATGACAGATTTT+TGG - chr5_4:61152606-61152625 Msa0861720:intron 30.0%
AAATAAAGTCAAAGGATCTC+TGG - chr5_4:61152792-61152811 Msa0861720:intron 30.0%
! TTGCAGAATCTTTTTCTGTA+TGG - chr5_4:61152885-61152904 Msa0861720:intron 30.0%
GTGCATTAAGTATTATTGTG+AGG - chr5_4:61152989-61153008 Msa0861720:intron 30.0%
!! ATTAGTACTGGTCTTCTTTA+TGG - chr5_4:61153380-61153399 Msa0861720:intron 30.0%
AACAAATGCCTGTATAAACT+AGG + chr5_4:61153443-61153462 None:intergenic 30.0%
AGAAAAATGAGCATAAAGGA+CGG + chr5_4:61153502-61153521 None:intergenic 30.0%
!! TCCTTTATGCTCATTTTTCT+GGG - chr5_4:61153502-61153521 Msa0861720:intron 30.0%
AAATTACTTAAAGAATGCCC+CGG - chr5_4:61153653-61153672 Msa0861720:intron 30.0%
ACAACTAAAAAGGAAAGAAG+GGG + chr5_4:61153762-61153781 None:intergenic 30.0%
GACAACTAAAAAGGAAAGAA+GGG + chr5_4:61153763-61153782 None:intergenic 30.0%
AGACAACTAAAAAGGAAAGA+AGG + chr5_4:61153764-61153783 None:intergenic 30.0%
ATCTTGGAAGACAACTAAAA+AGG + chr5_4:61153772-61153791 None:intergenic 30.0%
CTACTAAAGTGACAATGAAA+AGG - chr5_4:61153994-61154013 Msa0861720:intron 30.0%
!!! ATGTTTTAAGTTCTTTCACC+AGG - chr5_4:61154195-61154214 Msa0861720:intron 30.0%
AAATTCACATGAATAAAGCC+TGG + chr5_4:61154216-61154235 None:intergenic 30.0%
GAGATTTGAATCACACAATT+AGG - chr5_4:61154320-61154339 Msa0861720:intron 30.0%
TTGAATCACACAATTAGGTT+TGG - chr5_4:61154325-61154344 Msa0861720:intron 30.0%
TAGGGTTCAACATTAGTAAA+AGG - chr5_4:61154494-61154513 Msa0861720:intron 30.0%
AGGGTTCAACATTAGTAAAA+GGG - chr5_4:61154495-61154514 Msa0861720:intron 30.0%
TCACAAAAGTAACGAATCAA+TGG + chr5_4:61154651-61154670 None:intergenic 30.0%
! GATTTCTCATATCCAGTTTT+TGG - chr5_4:61154802-61154821 Msa0861720:intron 30.0%
ACATAGTTATCCATACAACT+GGG + chr5_4:61154846-61154865 None:intergenic 30.0%
! ATGGGTATGAATTTTTCTGT+TGG - chr5_4:61154945-61154964 Msa0861720:CDS 30.0%
! ATGGTTTTTCATGTTAGTTG+TGG - chr5_4:61155048-61155067 Msa0861720:intron 30.0%
! TCTATAGGATCTCCAATTTT+TGG - chr5_4:61155223-61155242 Msa0861720:intron 30.0%
! CTATAGGATCTCCAATTTTT+GGG - chr5_4:61155224-61155243 Msa0861720:intron 30.0%
! TATAGGATCTCCAATTTTTG+GGG - chr5_4:61155225-61155244 Msa0861720:intron 30.0%
! TTTCTTTTACCCCCAAAAAT+TGG + chr5_4:61155238-61155257 None:intergenic 30.0%
!! AATTTTTGGGGGTAAAAGAA+AGG - chr5_4:61155237-61155256 Msa0861720:intron 30.0%
AACAAAGAGAAAAAACTAGG+AGG - chr5_4:61155270-61155289 Msa0861720:intron 30.0%
ACAAAGAGAAAAAACTAGGA+GGG - chr5_4:61155271-61155290 Msa0861720:intron 30.0%
AAATGCAAATGTAACAAAGC+TGG - chr5_4:61155322-61155341 Msa0861720:intron 30.0%
!! ATAGCGGAATTTTAACAAAC+CGG - chr5_4:61155375-61155394 Msa0861720:intron 30.0%
TGATTGACAATATTGAAGCA+TGG - chr5_4:61155585-61155604 Msa0861720:intron 30.0%
TGTATTTCTCAAAGGGTTAA+GGG + chr5_4:61155634-61155653 None:intergenic 30.0%
! CTTTTATTCATGCTTGAGAT+CGG - chr5_4:61156010-61156029 Msa0861720:intron 30.0%
GATCGGATATATAAAGTTTG+AGG - chr5_4:61156027-61156046 Msa0861720:intron 30.0%
TTAGAACTCCTACATTCTAA+AGG + chr5_4:61156087-61156106 None:intergenic 30.0%
TGTGTTACATCCTAAACAAT+AGG + chr5_4:61156253-61156272 None:intergenic 30.0%
! ATTGTTTAGGATGTAACACA+AGG - chr5_4:61156253-61156272 Msa0861720:intron 30.0%
TTAACAGGCAACAATAAAAC+CGG - chr5_4:61156357-61156376 Msa0861720:intron 30.0%
CATAAATATGTATCCACCTT+AGG + chr5_4:61156462-61156481 None:intergenic 30.0%
ATATTTATGCAGCAGTATAC+AGG - chr5_4:61156473-61156492 Msa0861720:intron 30.0%
! ACAAATGAGTTTTACTTTGG+GGG - chr5_4:61156526-61156545 Msa0861720:intron 30.0%
AACTATAAAGGAGAATATGG+TGG - chr5_4:61156570-61156589 Msa0861720:CDS 30.0%
!!! TAAAATCAGTGGGCTATTTT+GGG + chr5_4:61156810-61156829 None:intergenic 30.0%
!!! ATAAAATCAGTGGGCTATTT+TGG + chr5_4:61156811-61156830 None:intergenic 30.0%
!!! AAAATAGCCCACTGATTTTA+TGG - chr5_4:61156810-61156829 Msa0861720:CDS 30.0%
! CTCTCAGTTTATTTAGTCTT+AGG - chr5_4:61156877-61156896 Msa0861720:CDS 30.0%
TTAACTTCAGTGATAGAACT+TGG - chr5_4:61157093-61157112 Msa0861720:CDS 30.0%
CTTCATTTATGAGAGATACT+AGG - chr5_4:61157312-61157331 Msa0861720:intron 30.0%
! TGAACTTGTTCATGTTCTAT+TGG + chr5_4:61157380-61157399 None:intergenic 30.0%
GAAAAAGTTACTATCTAGTC+AGG + chr5_4:61157412-61157431 None:intergenic 30.0%
ACAATAAATCACTCAGTCAA+GGG + chr5_4:61157584-61157603 None:intergenic 30.0%
TACAATAAATCACTCAGTCA+AGG + chr5_4:61157585-61157604 None:intergenic 30.0%
! TTTTCCATTGAATACGATTG+AGG + chr5_4:61157646-61157665 None:intergenic 30.0%
TACCTTGAACATTATTACAC+TGG + chr5_4:61157925-61157944 None:intergenic 30.0%
ATGCATATGTTAGTTGTTAC+TGG - chr5_4:61157975-61157994 Msa0861720:intron 30.0%
ACATTTCAAATTATGCTTGC+AGG - chr5_4:61158026-61158045 Msa0861720:intron 30.0%
AATAATGTTACATCTGACCA+AGG - chr5_4:61158119-61158138 Msa0861720:intron 30.0%
! TGACTATACCTCTAAAAGAA+TGG + chr5_4:61158158-61158177 None:intergenic 30.0%
GAAAGAATGTAAAGTATGGT+TGG + chr5_4:61158229-61158248 None:intergenic 30.0%
ATATATGTTGAAATTGCAGG+TGG - chr5_4:61158256-61158275 Msa0861720:intron 30.0%
GTAATGTAACCATAGAATGA+TGG - chr5_4:61158513-61158532 Msa0861720:intron 30.0%
AATCCATGAAAGAATAGCTT+CGG + chr5_4:61158546-61158565 None:intergenic 30.0%
TGTCAATCAATCATAACCAT+TGG - chr5_4:61158604-61158623 Msa0861720:intron 30.0%
! TACAAATGATGGTTTGTGAT+TGG - chr5_4:61158672-61158691 Msa0861720:CDS 30.0%
AAAGCTCAGACTAAAAATTC+AGG + chr5_4:61158781-61158800 None:intergenic 30.0%
TTACATTAATGAAGAAAGGG+TGG - chr5_4:61158927-61158946 Msa0861720:CDS 30.0%
TAGCATACAAGATTCATTTG+TGG - chr5_4:61159034-61159053 Msa0861720:five_prime_UTR 30.0%
! TTGGCTTCAAGTTTGTTCAT+TGG - chr5_4:61151082-61151101 Msa0861720:three_prime_UTR 35.0%
! AGCTTCTACTTATGGTGTTA+GGG - chr5_4:61151144-61151163 Msa0861720:three_prime_UTR 35.0%
TAACAGAAATTTAGGCCAAG+GGG + chr5_4:61151641-61151660 None:intergenic 35.0%
GATAACAGAAATTTAGGCCA+AGG + chr5_4:61151643-61151662 None:intergenic 35.0%
! AAAGGGTTTAGGGTTGAAAA+CGG - chr5_4:61151934-61151953 Msa0861720:CDS 35.0%
! AATCATGATTTTCTTGGAGC+GGG - chr5_4:61151994-61152013 Msa0861720:intron 35.0%
ATTAAATTGAGATTCGCTGC+TGG + chr5_4:61152040-61152059 None:intergenic 35.0%
AGTTTAGGCAAAATTACACC+AGG - chr5_4:61152117-61152136 Msa0861720:CDS 35.0%
TTTATAAACGCCAGCAATGT+TGG - chr5_4:61152239-61152258 Msa0861720:intron 35.0%
TCTTACGTGAGCATTCATAA+AGG - chr5_4:61152300-61152319 Msa0861720:intron 35.0%
TGTGCACAAGGGTTTAATTA+TGG - chr5_4:61152448-61152467 Msa0861720:intron 35.0%
! GGTTTAATTATGGTGTTGAG+CGG - chr5_4:61152458-61152477 Msa0861720:intron 35.0%
CATTCTTCACAAATTGGCTA+GGG + chr5_4:61152563-61152582 None:intergenic 35.0%
AAAGCCACCATAAAATGTCA+TGG + chr5_4:61152592-61152611 None:intergenic 35.0%
GAGAATGAAAGTCTGTTCAA+TGG - chr5_4:61152694-61152713 Msa0861720:intron 35.0%
TAATACTTAATGCACCGAGA+GGG + chr5_4:61152984-61153003 None:intergenic 35.0%
ATAATACTTAATGCACCGAG+AGG + chr5_4:61152985-61153004 None:intergenic 35.0%
!! TGTTCTGGAGATATGGAATA+TGG - chr5_4:61153243-61153262 Msa0861720:intron 35.0%
ACCAATGTCCTAGTTTATAC+AGG - chr5_4:61153432-61153451 Msa0861720:intron 35.0%
!! GTCCTTTATGCTCATTTTTC+TGG - chr5_4:61153501-61153520 Msa0861720:intron 35.0%
ACCCAGAAAAATGAGCATAA+AGG + chr5_4:61153506-61153525 None:intergenic 35.0%
AATTACTTAAAGAATGCCCC+GGG - chr5_4:61153654-61153673 Msa0861720:intron 35.0%
CAACTAAAAAGGAAAGAAGG+GGG + chr5_4:61153761-61153780 None:intergenic 35.0%
ATTACAGAGAGAGAAATACG+TGG + chr5_4:61153888-61153907 None:intergenic 35.0%
AGAATTAGGGAAGAACTGAA+AGG - chr5_4:61154262-61154281 Msa0861720:intron 35.0%
TGAAAGGTGAACCTAATTGT+TGG - chr5_4:61154278-61154297 Msa0861720:intron 35.0%
! CAGTAGGATTTGGGTTAATT+GGG - chr5_4:61154412-61154431 Msa0861720:intron 35.0%
GATTAATTCGCCTTCAACTA+GGG - chr5_4:61154476-61154495 Msa0861720:intron 35.0%
TAATGTTGAACCCTAGTTGA+AGG + chr5_4:61154489-61154508 None:intergenic 35.0%
!! ATTTTGGTAAACCCCAATCT+TGG - chr5_4:61154544-61154563 Msa0861720:intron 35.0%
ATAAGGAAGCTTCCAAGATT+GGG + chr5_4:61154578-61154597 None:intergenic 35.0%
AATAAGGAAGCTTCCAAGAT+TGG + chr5_4:61154579-61154598 None:intergenic 35.0%
!! AGTAAAGTATCGAATCCACA+GGG + chr5_4:61154756-61154775 None:intergenic 35.0%
!! TAGTAAAGTATCGAATCCAC+AGG + chr5_4:61154757-61154776 None:intergenic 35.0%
ATGAGAAATCCACAAGTGTA+CGG + chr5_4:61154792-61154811 None:intergenic 35.0%
ATAGTTATCCATACAACTGG+GGG + chr5_4:61154844-61154863 None:intergenic 35.0%
CATAGTTATCCATACAACTG+GGG + chr5_4:61154845-61154864 None:intergenic 35.0%
GACATAGTTATCCATACAAC+TGG + chr5_4:61154847-61154866 None:intergenic 35.0%
! GTATGAATTTTTCTGTTGGC+AGG - chr5_4:61154949-61154968 Msa0861720:CDS 35.0%
! AGTTAGTTTATCCACAGACA+TGG - chr5_4:61155029-61155048 Msa0861720:CDS 35.0%
AACATGAAAAACCATGTCTG+TGG + chr5_4:61155043-61155062 None:intergenic 35.0%
TCACGATCCATTCATTCTAT+AGG - chr5_4:61155208-61155227 Msa0861720:intron 35.0%
TGGAGATCCTATAGAATGAA+TGG + chr5_4:61155218-61155237 None:intergenic 35.0%
!! ATAGGATCTCCAATTTTTGG+GGG - chr5_4:61155226-61155245 Msa0861720:intron 35.0%
TAAAATTCCGCTATGCTGTA+GGG + chr5_4:61155369-61155388 None:intergenic 35.0%
TTAAAATTCCGCTATGCTGT+AGG + chr5_4:61155370-61155389 None:intergenic 35.0%
!! TAGCGGAATTTTAACAAACC+GGG - chr5_4:61155376-61155395 Msa0861720:intron 35.0%
TGTGATCTGTGATTGACAAA+TGG - chr5_4:61155491-61155510 Msa0861720:intron 35.0%
ATCTGTGATTGACAAATGGT+GGG - chr5_4:61155495-61155514 Msa0861720:intron 35.0%
ACAAAACAAAAAAGGCAGCT+CGG + chr5_4:61155560-61155579 None:intergenic 35.0%
GTGTATTTCTCAAAGGGTTA+AGG + chr5_4:61155635-61155654 None:intergenic 35.0%
TCCATTGGTCACGTATTAAA+GGG + chr5_4:61155880-61155899 None:intergenic 35.0%
ATCCATTGGTCACGTATTAA+AGG + chr5_4:61155881-61155900 None:intergenic 35.0%
!! GTGACCAATGGATTATTTAG+TGG - chr5_4:61155888-61155907 Msa0861720:intron 35.0%
! TCATGTCATAAAGTACTCGA+TGG - chr5_4:61155947-61155966 Msa0861720:intron 35.0%
GGAGTTTCACACTATCTATA+TGG - chr5_4:61155968-61155987 Msa0861720:intron 35.0%
! CGATTTTCACCTAGAAATAG+CGG + chr5_4:61156159-61156178 None:intergenic 35.0%
!! CGCTATTTCTAGGTGAAAAT+CGG - chr5_4:61156157-61156176 Msa0861720:intron 35.0%
!! GCTATTTCTAGGTGAAAATC+GGG - chr5_4:61156158-61156177 Msa0861720:intron 35.0%
!! CTATTTCTAGGTGAAAATCG+GGG - chr5_4:61156159-61156178 Msa0861720:intron 35.0%
AAAACCGGTGATATCTTTAC+TGG - chr5_4:61156372-61156391 Msa0861720:intron 35.0%
TATCTTTACTGGTGAGTGTT+AGG - chr5_4:61156383-61156402 Msa0861720:intron 35.0%
CTACTATAGTTCGCATTTCA+CGG + chr5_4:61156409-61156428 None:intergenic 35.0%
GTGAAATGCGAACTATAGTA+GGG - chr5_4:61156408-61156427 Msa0861720:intron 35.0%
TGTTGGAGCAGTAACTATAA+AGG - chr5_4:61156558-61156577 Msa0861720:CDS 35.0%
TTGTAGTATATAGTGCACTG+AGG - chr5_4:61156674-61156693 Msa0861720:intron 35.0%
GTCGATTATTATTCTCATCC+TGG + chr5_4:61156712-61156731 None:intergenic 35.0%
!! GATTGTCTGGCTTTATCTTT+GGG + chr5_4:61156745-61156764 None:intergenic 35.0%
!! AGATTGTCTGGCTTTATCTT+TGG + chr5_4:61156746-61156765 None:intergenic 35.0%
!!! AAAATCAGTGGGCTATTTTG+GGG + chr5_4:61156809-61156828 None:intergenic 35.0%
ACTAGACACTAGTGCATTTA+GGG + chr5_4:61156938-61156957 None:intergenic 35.0%
TACTAGACACTAGTGCATTT+AGG + chr5_4:61156939-61156958 None:intergenic 35.0%
AATGCACTAGTGTCTAGTAT+TGG - chr5_4:61156940-61156959 Msa0861720:intron 35.0%
CAGTGAAACATATCTCACAA+AGG + chr5_4:61157019-61157038 None:intergenic 35.0%
CAGACAATGGTTATGGTTAT+TGG + chr5_4:61157214-61157233 None:intergenic 35.0%
TACCTGGTATCATGAATAGA+TGG - chr5_4:61157234-61157253 Msa0861720:intron 35.0%
AACCATCTATTCATGATACC+AGG + chr5_4:61157239-61157258 None:intergenic 35.0%
TGTTGCTAGATTAATGGTAC+TGG - chr5_4:61157549-61157568 Msa0861720:intron 35.0%
AATAAATCACTCAGTCAAGG+GGG + chr5_4:61157582-61157601 None:intergenic 35.0%
CAATAAATCACTCAGTCAAG+GGG + chr5_4:61157583-61157602 None:intergenic 35.0%
! TTGAGGCGTCAATTTGAAAA+GGG + chr5_4:61157629-61157648 None:intergenic 35.0%
! ATTGAGGCGTCAATTTGAAA+AGG + chr5_4:61157630-61157649 None:intergenic 35.0%
TCAAATTATGCTTGCAGGAT+TGG - chr5_4:61158031-61158050 Msa0861720:intron 35.0%
CAAATTATGCTTGCAGGATT+GGG - chr5_4:61158032-61158051 Msa0861720:intron 35.0%
!! GCATGGTATTGGTATATGAT+GGG + chr5_4:61158482-61158501 None:intergenic 35.0%
!! TGCATGGTATTGGTATATGA+TGG + chr5_4:61158483-61158502 None:intergenic 35.0%
TTTCCGAAGCTATTCTTTCA+TGG - chr5_4:61158540-61158559 Msa0861720:intron 35.0%
!! TTTTTAGTCTGAGCTTTGCA+AGG - chr5_4:61158784-61158803 Msa0861720:intron 35.0%
TTATCTAACACAAGCAACTG+AGG + chr5_4:61158829-61158848 None:intergenic 35.0%
TCAGTTGCTTGTGTTAGATA+AGG - chr5_4:61158828-61158847 Msa0861720:intron 35.0%
CTTGTGTTAGATAAGGTCAT+TGG - chr5_4:61158835-61158854 Msa0861720:intron 35.0%
! ATGATGACGATGATGATCTG+AGG - chr5_4:61150940-61150959 Msa0861720:three_prime_UTR 40.0%
CTGTCGAATGAGAATGTAAC+AGG - chr5_4:61151046-61151065 Msa0861720:three_prime_UTR 40.0%
CAGCTTCTACTTATGGTGTT+AGG - chr5_4:61151143-61151162 Msa0861720:three_prime_UTR 40.0%
ATCTATTGGAACCACTATGG+TGG - chr5_4:61151300-61151319 Msa0861720:three_prime_UTR 40.0%
TCTATTGGAACCACTATGGT+GGG - chr5_4:61151301-61151320 Msa0861720:three_prime_UTR 40.0%
! GTAAGCTTTTCCTTCTTCCT+AGG - chr5_4:61151339-61151358 Msa0861720:three_prime_UTR 40.0%
TGACATCAAACCTAGGAAGA+AGG + chr5_4:61151352-61151371 None:intergenic 40.0%
ACGGCAAATTGCTCTTTAGA+CGG - chr5_4:61151953-61151972 Msa0861720:CDS 40.0%
GTTAAAGACTAAAGGACTCC+TGG + chr5_4:61152138-61152157 None:intergenic 40.0%
! GAATGCTCACGTAAGACTTT+TGG + chr5_4:61152296-61152315 None:intergenic 40.0%
ATATTGACCATGGCAGATTG+CGG - chr5_4:61152535-61152554 Msa0861720:intron 40.0%
CCATTCTTCACAAATTGGCT+AGG + chr5_4:61152564-61152583 None:intergenic 40.0%
CCTAGCCAATTTGTGAAGAA+TGG - chr5_4:61152561-61152580 Msa0861720:intron 40.0%
CACTGCCATTCTTCACAAAT+TGG + chr5_4:61152569-61152588 None:intergenic 40.0%
! AGTGCCATGACATTTTATGG+TGG - chr5_4:61152585-61152604 Msa0861720:intron 40.0%
TACAGTCACGACAGTGTTAT+CGG + chr5_4:61152649-61152668 None:intergenic 40.0%
GTCTCTTGTTCAGTGATTGT+AGG - chr5_4:61152907-61152926 Msa0861720:intron 40.0%
TTGTTCAGTGATTGTAGGAG+AGG - chr5_4:61152912-61152931 Msa0861720:intron 40.0%
AATACTTAATGCACCGAGAG+GGG + chr5_4:61152983-61153002 None:intergenic 40.0%
! CTGACCTTATTCTGAAAGAG+AGG - chr5_4:61153128-61153147 Msa0861720:intron 40.0%
GTAGCCTCTCTTTCAGAATA+AGG + chr5_4:61153135-61153154 None:intergenic 40.0%
CTACACAAGCTTGGGATATT+AGG - chr5_4:61153151-61153170 Msa0861720:intron 40.0%
TGTTATTCACGCTCCTAAAG+AGG - chr5_4:61153207-61153226 Msa0861720:intron 40.0%
GATGTGATAGGATCCTCTTT+AGG + chr5_4:61153223-61153242 None:intergenic 40.0%
ATCTCCAGAACAGATGTGAT+AGG + chr5_4:61153235-61153254 None:intergenic 40.0%
!! TCACATCTGTTCTGGAGATA+TGG - chr5_4:61153236-61153255 Msa0861720:intron 40.0%
CAGCATTCCTAGCATATGTT+GGG - chr5_4:61153352-61153371 Msa0861720:intron 40.0%
ATACAGACCCAACATATGCT+AGG + chr5_4:61153362-61153381 None:intergenic 40.0%
TGTTGGGTCTGTATTAGTAC+TGG - chr5_4:61153368-61153387 Msa0861720:intron 40.0%
! TTCCATTTTGCACCAACATG+TGG - chr5_4:61153405-61153424 Msa0861720:intron 40.0%
ACATTGGTATGTCCACATGT+TGG + chr5_4:61153420-61153439 None:intergenic 40.0%
GCCTGTATAAACTAGGACAT+TGG + chr5_4:61153436-61153455 None:intergenic 40.0%
TACAGGCATTTGTTCGTTGA+TGG - chr5_4:61153449-61153468 Msa0861720:intron 40.0%
ACAGGCATTTGTTCGTTGAT+GGG - chr5_4:61153450-61153469 Msa0861720:intron 40.0%
ATTACTTAAAGAATGCCCCG+GGG - chr5_4:61153655-61153674 Msa0861720:intron 40.0%
TGACAATGAAAAGGAGCTGA+GGG - chr5_4:61154003-61154022 Msa0861720:intron 40.0%
! CAATTAGGTTTGGTTTCTCG+AGG - chr5_4:61154335-61154354 Msa0861720:intron 40.0%
ACTGCCGTGGTAATTGATAT+TGG + chr5_4:61154396-61154415 None:intergenic 40.0%
ATATCAATTACCACGGCAGT+AGG - chr5_4:61154396-61154415 Msa0861720:intron 40.0%
! GCAGTAGGATTTGGGTTAAT+TGG - chr5_4:61154411-61154430 Msa0861720:intron 40.0%
GGATTAATTCGCCTTCAACT+AGG - chr5_4:61154475-61154494 Msa0861720:intron 40.0%
TGGGGTTAACTTCCAAGATT+GGG + chr5_4:61154559-61154578 None:intergenic 40.0%
TTGGGGTTAACTTCCAAGAT+TGG + chr5_4:61154560-61154579 None:intergenic 40.0%
TTGGAAGTTAACCCCAATCT+TGG - chr5_4:61154563-61154582 Msa0861720:intron 40.0%
TAAGGAAGCTTCCAAGATTG+GGG + chr5_4:61154577-61154596 None:intergenic 40.0%
GACAAAAAACCGTACACTTG+TGG - chr5_4:61154780-61154799 Msa0861720:intron 40.0%
TGCACTAAAATGGTGTCTGA+TGG - chr5_4:61154926-61154945 Msa0861720:CDS 40.0%
GCACTAAAATGGTGTCTGAT+GGG - chr5_4:61154927-61154946 Msa0861720:CDS 40.0%
! AGGTCTGTTACTTAGCATAC+TGG - chr5_4:61155107-61155126 Msa0861720:intron 40.0%
AAGAGAAAAAACTAGGAGGG+AGG - chr5_4:61155274-61155293 Msa0861720:intron 40.0%
AGAGAAAAAACTAGGAGGGA+GGG - chr5_4:61155275-61155294 Msa0861720:intron 40.0%
CACAGATCACAGAAAATAGC+AGG + chr5_4:61155482-61155501 None:intergenic 40.0%
GATCTGTGATTGACAAATGG+TGG - chr5_4:61155494-61155513 Msa0861720:intron 40.0%
GTATGTCATTAATGAGGACC+AGG + chr5_4:61155855-61155874 None:intergenic 40.0%
AGGGTGGTATGTCATTAATG+AGG + chr5_4:61155861-61155880 None:intergenic 40.0%
ATTGGTCACGTATTAAAGGG+TGG + chr5_4:61155877-61155896 None:intergenic 40.0%
ACCCTTTAATACGTGACCAA+TGG - chr5_4:61155876-61155895 Msa0861720:intron 40.0%
TGAGGAAAATGCTCAGCAAA+TGG - chr5_4:61156045-61156064 Msa0861720:intron 40.0%
!! GGAGAGAACCTTTAGAATGT+AGG - chr5_4:61156076-61156095 Msa0861720:intron 40.0%
!! AGATACCCAAGTTCTGAAAC+CGG + chr5_4:61156212-61156231 None:intergenic 40.0%
TGTAACACAAGGCTCGAATT+CGG - chr5_4:61156264-61156283 Msa0861720:intron 40.0%
AATGCTTGAGCTGTGATTTG+TGG - chr5_4:61156302-61156321 Msa0861720:intron 40.0%
CTGATTGCCCATCAATACAA+AGG - chr5_4:61156328-61156347 Msa0861720:intron 40.0%
CTCACCAGTAAAGATATCAC+CGG + chr5_4:61156379-61156398 None:intergenic 40.0%
CGTGAAATGCGAACTATAGT+AGG - chr5_4:61156407-61156426 Msa0861720:intron 40.0%
TGCGAACTATAGTAGGGAAA+AGG - chr5_4:61156414-61156433 Msa0861720:intron 40.0%
! ATAGTAGGGAAAAGGTGTAG+TGG - chr5_4:61156422-61156441 Msa0861720:intron 40.0%
TTTGGGGGAAGTTGAATTGT+TGG - chr5_4:61156541-61156560 Msa0861720:intron 40.0%
!! TCCAAGTTGGTCTATACTTG+TGG - chr5_4:61156600-61156619 Msa0861720:CDS 40.0%
ACCACAAGTATAGACCAACT+TGG + chr5_4:61156604-61156623 None:intergenic 40.0%
TATACTTGTGGTTCCTGTTC+TGG - chr5_4:61156612-61156631 Msa0861720:CDS 40.0%
CTGAGGAAAATAGAAACACC+AGG - chr5_4:61156691-61156710 Msa0861720:intron 40.0%
GCTTAAAGTGAGAGATTGTC+TGG + chr5_4:61156758-61156777 None:intergenic 40.0%
!!! AAATCAGTGGGCTATTTTGG+GGG + chr5_4:61156808-61156827 None:intergenic 40.0%
GTTGAGGCCATAAAATCAGT+GGG + chr5_4:61156820-61156839 None:intergenic 40.0%
AGTTGAGGCCATAAAATCAG+TGG + chr5_4:61156821-61156840 None:intergenic 40.0%
CTAGGTATCAAATGGAGTTG+AGG + chr5_4:61156836-61156855 None:intergenic 40.0%
! CACTAGTGTCTAGTATTGGA+TGG - chr5_4:61156944-61156963 Msa0861720:intron 40.0%
ATGATACCAGGTACAGACAA+TGG + chr5_4:61157227-61157246 None:intergenic 40.0%
ATGATTACTTGCAAGGGCTA+AGG + chr5_4:61157343-61157362 None:intergenic 40.0%
GGCCAGTGTAATAATGTTCA+AGG - chr5_4:61157920-61157939 Msa0861720:intron 40.0%
!! GGCTTTATTGTTGTACTCTC+TGG - chr5_4:61158093-61158112 Msa0861720:intron 40.0%
! GAGAGAAGCCATTCTTTTAG+AGG - chr5_4:61158147-61158166 Msa0861720:intron 40.0%
TATGTTGAAATTGCAGGTGG+CGG - chr5_4:61158259-61158278 Msa0861720:intron 40.0%
ACAGATAATGTAGGCGAAGA+AGG + chr5_4:61158289-61158308 None:intergenic 40.0%
TAAAGCCGGACAGATAATGT+AGG + chr5_4:61158298-61158317 None:intergenic 40.0%
! TTATCTGTCCGGCTTTATAC+CGG - chr5_4:61158301-61158320 Msa0861720:intron 40.0%
AAATGGGGACTCGTTACTTA+AGG - chr5_4:61158324-61158343 Msa0861720:intron 40.0%
TCATTCAGTTTCCCAGAGAA+AGG + chr5_4:61158455-61158474 None:intergenic 40.0%
! TGTAACCATAGAATGATGGG+AGG - chr5_4:61158517-61158536 Msa0861720:intron 40.0%
!! CGAGATTAGTTCTCCTTTTG+AGG - chr5_4:61158898-61158917 Msa0861720:CDS 40.0%
AACAGGTCTCATTCTAGCGT+TGG - chr5_4:61151063-61151082 Msa0861720:three_prime_UTR 45.0%
CGAAGAGCAGCTTCTACTTA+TGG - chr5_4:61151136-61151155 Msa0861720:three_prime_UTR 45.0%
! TCTACTTATGGTGTTAGGGC+TGG - chr5_4:61151148-61151167 Msa0861720:three_prime_UTR 45.0%
TAAGTGCTCTTTGAGCCCTA+AGG - chr5_4:61151587-61151606 Msa0861720:three_prime_UTR 45.0%
TGAATCTAGGTAGTCGATCC+CGG - chr5_4:61151679-61151698 Msa0861720:CDS 45.0%
!!! TGCTATCCCACTTTTGGAGT+CGG + chr5_4:61151722-61151741 None:intergenic 45.0%
AAAAGTGGGATAGCAGGATC+CGG - chr5_4:61151727-61151746 Msa0861720:CDS 45.0%
GAAGTTTGGTCCAACATTGC+TGG + chr5_4:61152252-61152271 None:intergenic 45.0%
TGACCTTGATGTTGTGCACA+AGG - chr5_4:61152436-61152455 Msa0861720:intron 45.0%
GACCTTGATGTTGTGCACAA+GGG - chr5_4:61152437-61152456 Msa0861720:intron 45.0%
AACCCTTGTGCACAACATCA+AGG + chr5_4:61152442-61152461 None:intergenic 45.0%
! GGCAGTGCCATGACATTTTA+TGG - chr5_4:61152582-61152601 Msa0861720:intron 45.0%
GTCAGCTAAAACAGCACTAG+AGG + chr5_4:61153113-61153132 None:intergenic 45.0%
AAAGAGAGGCTACACAAGCT+TGG - chr5_4:61153142-61153161 Msa0861720:intron 45.0%
AAGAGAGGCTACACAAGCTT+GGG - chr5_4:61153143-61153162 Msa0861720:intron 45.0%
GGATCCTATCACATCTGTTC+TGG - chr5_4:61153228-61153247 Msa0861720:intron 45.0%
TGGAATATGGCTACTCAACC+AGG - chr5_4:61153256-61153275 Msa0861720:intron 45.0%
TATGGCTACTCAACCAGGTT+AGG - chr5_4:61153261-61153280 Msa0861720:intron 45.0%
ATGGCTACTCAACCAGGTTA+GGG - chr5_4:61153262-61153281 Msa0861720:intron 45.0%
AAGGTGATGAATCCCTAACC+TGG + chr5_4:61153277-61153296 None:intergenic 45.0%
GCAGCATTCCTAGCATATGT+TGG - chr5_4:61153351-61153370 Msa0861720:intron 45.0%
GTCCACATGTTGGTGCAAAA+TGG + chr5_4:61153410-61153429 None:intergenic 45.0%
TTACTTAAAGAATGCCCCGG+GGG - chr5_4:61153656-61153675 Msa0861720:intron 45.0%
GTGACAATGAAAAGGAGCTG+AGG - chr5_4:61154002-61154021 Msa0861720:intron 45.0%
ATTACCACGGCAGTAGGATT+TGG - chr5_4:61154402-61154421 Msa0861720:intron 45.0%
TTACCACGGCAGTAGGATTT+GGG - chr5_4:61154403-61154422 Msa0861720:intron 45.0%
! GGATTTGGGTTAATTGGGCA+CGG - chr5_4:61154417-61154436 Msa0861720:intron 45.0%
GGGGTTAACTTCCAAGATTG+GGG + chr5_4:61154558-61154577 None:intergenic 45.0%
GGTGAAAGAACGCCAAAAAC+TGG + chr5_4:61154817-61154836 None:intergenic 45.0%
CATTTGCATGACGACGCATA+TGG + chr5_4:61155074-61155093 None:intergenic 45.0%
! AGGGTATCAGTGAGCATAAG+AGG - chr5_4:61155294-61155313 Msa0861720:intron 45.0%
TGCGTATCACAGAACAATCC+CGG + chr5_4:61155397-61155416 None:intergenic 45.0%
GCTCAGCAAATGGTAAGTTG+TGG - chr5_4:61156055-61156074 Msa0861720:intron 45.0%
! GAAAAGGTGTAGTGGAGATG+AGG - chr5_4:61156430-61156449 Msa0861720:intron 45.0%
TGGTGGAAACTTGTCCAAGT+TGG - chr5_4:61156587-61156606 Msa0861720:CDS 45.0%
CACAATGAGGCCTAAAGCTA+GGG + chr5_4:61156905-61156924 None:intergenic 45.0%
! CATTGATATACAGGGAGTGC+AGG + chr5_4:61156972-61156991 None:intergenic 45.0%
CCAGGTACAGACAATGGTTA+TGG + chr5_4:61157221-61157240 None:intergenic 45.0%
CCATAACCATTGTCTGTACC+TGG - chr5_4:61157218-61157237 Msa0861720:intron 45.0%
TTACTTGCAAGGGCTAAGGA+AGG + chr5_4:61157339-61157358 None:intergenic 45.0%
GACGCCTCAATCGTATTCAA+TGG - chr5_4:61157639-61157658 Msa0861720:intron 45.0%
TTATGCTTGCAGGATTGGGA+TGG - chr5_4:61158036-61158055 Msa0861720:intron 45.0%
GTAAAGTATGGTTGGCGAGT+CGG + chr5_4:61158221-61158240 None:intergenic 45.0%
CTTCGCCTACATTATCTGTC+CGG - chr5_4:61158290-61158309 Msa0861720:intron 45.0%
! TCCGGCTTTATACCGGAAAT+GGG - chr5_4:61158308-61158327 Msa0861720:intron 45.0%
AAGTAACGAGTCCCCATTTC+CGG + chr5_4:61158323-61158342 None:intergenic 45.0%
TGAAGAGAACGAATCTCCTG+AGG - chr5_4:61158351-61158370 Msa0861720:intron 45.0%
CTTCTTGAGCACATATCCTC+AGG + chr5_4:61158370-61158389 None:intergenic 45.0%
GGGAAGTTGAACCTTTCTCT+GGG - chr5_4:61158441-61158460 Msa0861720:intron 45.0%
GGAAACCTCCCATCATTCTA+TGG + chr5_4:61158525-61158544 None:intergenic 45.0%
!!! ATTTTTATTTATTATTTTGT+AGG - chr5_4:61151260-61151279 Msa0861720:three_prime_UTR 5.0%
!! ATTAGTTAAATTATAATAAT+TGG - chr5_4:61154713-61154732 Msa0861720:intron 5.0%
GAGGAACCTCGTTTGTCTGT+CGG - chr5_4:61150959-61150978 Msa0861720:three_prime_UTR 50.0%
!! TTGGAACCACTATGGTGGGT+AGG - chr5_4:61151305-61151324 Msa0861720:three_prime_UTR 50.0%
!! TGGAACCACTATGGTGGGTA+GGG - chr5_4:61151306-61151325 Msa0861720:three_prime_UTR 50.0%
ATCATCCCTACCCACCATAG+TGG + chr5_4:61151314-61151333 None:intergenic 50.0%
!! TTCCTCCAAGAGCACTAGCA+GGG + chr5_4:61151548-61151567 None:intergenic 50.0%
!! GGGCTCAAAGAGCACTTACA+AGG + chr5_4:61151585-61151604 None:intergenic 50.0%
! GAGTAGCCGACTCCAAAAGT+GGG - chr5_4:61151713-61151732 Msa0861720:CDS 50.0%
GACTCCAAAAGTGGGATAGC+AGG - chr5_4:61151721-61151740 Msa0861720:CDS 50.0%
! GGATCCTGCTATCCCACTTT+TGG + chr5_4:61151728-61151747 None:intergenic 50.0%
AAAGTGGGATAGCAGGATCC+GGG - chr5_4:61151728-61151747 Msa0861720:CDS 50.0%
! ATTTTCTTGGAGCGGGAACC+TGG - chr5_4:61152001-61152020 Msa0861720:intron 50.0%
! TTTTCTTGGAGCGGGAACCT+GGG - chr5_4:61152002-61152021 Msa0861720:intron 50.0%
AGTCACGACAGTGTTATCGG+CGG + chr5_4:61152646-61152665 None:intergenic 50.0%
AGAGGGGTAACTAGAACAGC+AGG + chr5_4:61152967-61152986 None:intergenic 50.0%
! GCTGTTCTAGTTACCCCTCT+CGG - chr5_4:61152967-61152986 Msa0861720:intron 50.0%
!! GTCTTGTTAAAGAGTGCCCC+CGG - chr5_4:61153524-61153543 Msa0861720:intron 50.0%
!! TCTTGTTAAAGAGTGCCCCC+GGG - chr5_4:61153525-61153544 Msa0861720:intron 50.0%
AAATGTTAACGAGTGCCCCC+GGG + chr5_4:61153674-61153693 None:intergenic 50.0%
GAAATGTTAACGAGTGCCCC+CGG + chr5_4:61153675-61153694 None:intergenic 50.0%
! GAGCTGAGGGAGTATATGAC+AGG - chr5_4:61154016-61154035 Msa0861720:intron 50.0%
TAACCCAAATCCTACTGCCG+TGG + chr5_4:61154409-61154428 None:intergenic 50.0%
CTCAAAAATCACGGTCCCTG+TGG - chr5_4:61154738-61154757 Msa0861720:intron 50.0%
ATCCATACAACTGGGGGAGA+GGG + chr5_4:61154838-61154857 None:intergenic 50.0%
TATCCATACAACTGGGGGAG+AGG + chr5_4:61154839-61154858 None:intergenic 50.0%
! GTGATGAGCGTCAAAGCACT+TGG - chr5_4:61154971-61154990 Msa0861720:CDS 50.0%
GAAGAGTCCCTACAGCATAG+CGG - chr5_4:61155359-61155378 Msa0861720:intron 50.0%
ACAAAGCTCCCGAATACGCA+GGG + chr5_4:61155534-61155553 None:intergenic 50.0%
!! TGCGAGTCACCGCTATTTCT+AGG - chr5_4:61156147-61156166 Msa0861720:intron 50.0%
!! ATACCGCCGGTTTCAGAACT+TGG - chr5_4:61156203-61156222 Msa0861720:intron 50.0%
!! TACCGCCGGTTTCAGAACTT+GGG - chr5_4:61156204-61156223 Msa0861720:intron 50.0%
!! TACCCAAGTTCTGAAACCGG+CGG + chr5_4:61156209-61156228 None:intergenic 50.0%
AACACAAGGCTCGAATTCGG+TGG - chr5_4:61156267-61156286 Msa0861720:intron 50.0%
GGAGATGAGGAAGCAACCTA+AGG - chr5_4:61156443-61156462 Msa0861720:intron 50.0%
GATGAGGAAGCAACCTAAGG+TGG - chr5_4:61156446-61156465 Msa0861720:intron 50.0%
CATACGAGTCGTACCAGAAC+AGG + chr5_4:61156628-61156647 None:intergenic 50.0%
TCTGGTACGACTCGTATGCA+AGG - chr5_4:61156630-61156649 Msa0861720:CDS 50.0%
!! TTTTGGGGGTTGAGTGGAGT+GGG + chr5_4:61156794-61156813 None:intergenic 50.0%
!! ATTTTGGGGGTTGAGTGGAG+TGG + chr5_4:61156795-61156814 None:intergenic 50.0%
! GTCTTAGGCTCCCTAGCTTT+AGG - chr5_4:61156892-61156911 Msa0861720:intron 50.0%
GCACAATGAGGCCTAAAGCT+AGG + chr5_4:61156906-61156925 None:intergenic 50.0%
! GACACTAGTGCATTTAGGGC+CGG + chr5_4:61156934-61156953 None:intergenic 50.0%
GGCACTTGACACCTTCAACA+CGG - chr5_4:61157764-61157783 Msa0861720:intron 50.0%
AGACACGATTGCCGTGTTGA+AGG + chr5_4:61157778-61157797 None:intergenic 50.0%
GGCACTTGACACCTTCAACA+CGG - chr5_4:61157764-61157783 Msa0861720:intron 50.0%
AGACACGATTGCCGTGTTGA+AGG + chr5_4:61157778-61157797 None:intergenic 50.0%
ATGGCTTCTCTCGAAGTCCT+TGG + chr5_4:61158139-61158158 None:intergenic 50.0%
! GTCCGGCTTTATACCGGAAA+TGG - chr5_4:61158307-61158326 Msa0861720:intron 50.0%
CCCCATTTCCGGTATAAAGC+CGG + chr5_4:61158312-61158331 None:intergenic 50.0%
! CCGGCTTTATACCGGAAATG+GGG - chr5_4:61158309-61158328 Msa0861720:intron 50.0%
GGGGAAGTTGAACCTTTCTC+TGG - chr5_4:61158440-61158459 Msa0861720:intron 50.0%
TACCAATACCATGCAGCTGC+AGG - chr5_4:61158488-61158507 Msa0861720:intron 50.0%
TACCTGCAGCTGCATGGTAT+TGG + chr5_4:61158493-61158512 None:intergenic 50.0%
CATTACTACCTGCAGCTGCA+TGG + chr5_4:61158499-61158518 None:intergenic 50.0%
TGAGCTCCGACAGACAAACG+AGG + chr5_4:61150968-61150987 None:intergenic 55.0%
!! CTTCCTCCAAGAGCACTAGC+AGG + chr5_4:61151549-61151568 None:intergenic 55.0%
CTGCTAGTGCTCTTGGAGGA+AGG - chr5_4:61151547-61151566 Msa0861720:three_prime_UTR 55.0%
CGAAGGCAGGGAAGACCTTA+GGG + chr5_4:61151605-61151624 None:intergenic 55.0%
TCGAAGGCAGGGAAGACCTT+AGG + chr5_4:61151606-61151625 None:intergenic 55.0%
AAGGTCTTCCCTGCCTTCGA+CGG - chr5_4:61151606-61151625 Msa0861720:exon 55.0%
! GGAGTAGCCGACTCCAAAAG+TGG - chr5_4:61151712-61151731 Msa0861720:CDS 55.0%
GGCTGTGTGATGTGCATTGC+TGG - chr5_4:61153172-61153191 Msa0861720:intron 55.0%
!! CTTGTTAAAGAGTGCCCCCG+GGG - chr5_4:61153526-61153545 Msa0861720:intron 55.0%
!! ATCCTTAAAGAGTGCCCCGG+GGG + chr5_4:61153543-61153562 None:intergenic 55.0%
!! GATCCTTAAAGAGTGCCCCG+GGG + chr5_4:61153544-61153563 None:intergenic 55.0%
!! GGATCCTTAAAGAGTGCCCC+GGG + chr5_4:61153545-61153564 None:intergenic 55.0%
!! GGGATCCTTAAAGAGTGCCC+CGG + chr5_4:61153546-61153565 None:intergenic 55.0%
AATGTTAACGAGTGCCCCCG+GGG + chr5_4:61153673-61153692 None:intergenic 55.0%
! CAAATGGTGGGACCCTTTCC+CGG - chr5_4:61155507-61155526 Msa0861720:intron 55.0%
AATACGCAGGGTCCGGGAAA+GGG + chr5_4:61155522-61155541 None:intergenic 55.0%
TTTCCCGGACCCTGCGTATT+CGG - chr5_4:61155522-61155541 Msa0861720:intron 55.0%
CACAAAGCTCCCGAATACGC+AGG + chr5_4:61155535-61155554 None:intergenic 55.0%
ATCCTCTCACGTCATACCGC+CGG - chr5_4:61156190-61156209 Msa0861720:intron 55.0%
!! GGGCTATTTTGGGGGTTGAG+TGG + chr5_4:61156800-61156819 None:intergenic 55.0%
AGGCCTCATTGTGCCTTGAC+CGG - chr5_4:61156912-61156931 Msa0861720:intron 55.0%
! AGTGCATTTAGGGCCGGTCA+AGG + chr5_4:61156928-61156947 None:intergenic 55.0%
AGAGAGGGCTTGAGTCCGAG+AGG - chr5_4:61151509-61151528 Msa0861720:three_prime_UTR 60.0%
GCTTGAGTCCGAGAGGTCCT+CGG - chr5_4:61151516-61151535 Msa0861720:three_prime_UTR 60.0%
TCGAGCCCTGCTAGTGCTCT+TGG - chr5_4:61151540-61151559 Msa0861720:three_prime_UTR 60.0%
AGCCCTGCTAGTGCTCTTGG+AGG - chr5_4:61151543-61151562 Msa0861720:three_prime_UTR 60.0%
AGGTCTTCCCTGCCTTCGAC+GGG - chr5_4:61151607-61151626 Msa0861720:exon 60.0%
GGATAGCAGGATCCGGGTAG+CGG - chr5_4:61151734-61151753 Msa0861720:intron 60.0%
GATAGCAGGATCCGGGTAGC+GGG - chr5_4:61151735-61151754 Msa0861720:intron 60.0%
ATAGCAGGATCCGGGTAGCG+GGG - chr5_4:61151736-61151755 Msa0861720:intron 60.0%
TCCTTTGTGACCCCGCTACC+CGG + chr5_4:61151749-61151768 None:intergenic 60.0%
ACAGTGTTATCGGCGGCGGA+TGG + chr5_4:61152639-61152658 None:intergenic 60.0%
CACGACAGTGTTATCGGCGG+CGG + chr5_4:61152643-61152662 None:intergenic 60.0%
CACCCTCTCCCCCAGTTGTA+TGG - chr5_4:61154833-61154852 Msa0861720:intron 60.0%
GAATACGCAGGGTCCGGGAA+AGG + chr5_4:61155523-61155542 None:intergenic 60.0%
TTCCCGGACCCTGCGTATTC+GGG - chr5_4:61155523-61155542 Msa0861720:intron 60.0%
AACCGGCGGTATGACGTGAG+AGG + chr5_4:61156195-61156214 None:intergenic 60.0%
GGCTCGAACCGAGGACCTCT+CGG + chr5_4:61151527-61151546 None:intergenic 65.0%
CACTAGCAGGGCTCGAACCG+AGG + chr5_4:61151536-61151555 None:intergenic 65.0%
GGTCTTCCCTGCCTTCGACG+GGG - chr5_4:61151608-61151627 Msa0861720:exon 65.0%
GTCTTCCCTGCCTTCGACGG+GGG - chr5_4:61151609-61151628 Msa0861720:exon 65.0%
TGATGCCCCCGTCGAAGGCA+GGG + chr5_4:61151617-61151636 None:intergenic 65.0%
ATGATGCCCCCGTCGAAGGC+AGG + chr5_4:61151618-61151637 None:intergenic 65.0%
GTCGATCCCGGATAGCAGCG+CGG - chr5_4:61151691-61151710 Msa0861720:CDS 65.0%
GCTACTCCGCGCTGCTATCC+GGG + chr5_4:61151700-61151719 None:intergenic 65.0%
GGCTACTCCGCGCTGCTATC+CGG + chr5_4:61151701-61151720 None:intergenic 65.0%
!! TCCGGGTAGCGGGGTCACAA+AGG - chr5_4:61151745-61151764 Msa0861720:intron 65.0%
TGGAGCGGGAACCTGGGAAC+TGG - chr5_4:61152008-61152027 Msa0861720:intron 65.0%
GCTGGCATGCTCCAGTTCCC+AGG + chr5_4:61152022-61152041 None:intergenic 65.0%
!! TAGGGCGCCGCAATCTGCCA+TGG + chr5_4:61152545-61152564 None:intergenic 65.0%
GTGTTATCGGCGGCGGATGG+CGG + chr5_4:61152636-61152655 None:intergenic 65.0%
! TGCCCCCGGGGCACTCTTTA+AGG - chr5_4:61153538-61153557 Msa0861720:intron 65.0%
CTCCCGAATACGCAGGGTCC+GGG + chr5_4:61155528-61155547 None:intergenic 65.0%
GCTCCCGAATACGCAGGGTC+CGG + chr5_4:61155529-61155548 None:intergenic 65.0%
!! GGTTGAGTGGAGTGGGCTGG+GGG + chr5_4:61156787-61156806 None:intergenic 65.0%
!! GGGTTGAGTGGAGTGGGCTG+GGG + chr5_4:61156788-61156807 None:intergenic 65.0%
! GGGGTTGAGTGGAGTGGGCT+GGG + chr5_4:61156789-61156808 None:intergenic 65.0%
GGGCCGGTCAAGGCACAATG+AGG + chr5_4:61156918-61156937 None:intergenic 65.0%
GGGGATGATGCCCCCGTCGA+AGG + chr5_4:61151622-61151641 None:intergenic 70.0%
!! CGACGGGGGCATCATCCCCT+TGG - chr5_4:61151623-61151642 Msa0861720:CDS 70.0%
GGGGGTTGAGTGGAGTGGGC+TGG + chr5_4:61156790-61156809 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 61150924 61159103 61150924 ID=Msa0861720;Name=Msa0861720
chr5_4 mRNA 61150924 61159103 61150924 ID=Msa0861720-mRNA-1;Parent=Msa0861720;Name=Msa0861720-mRNA-1;_AED=0.14;_eAED=0.14;_QI=116|0.87|0.77|1|1|1|9|698|366
chr5_4 exon 61150924 61151752 61150924 ID=Msa0861720-mRNA-1:exon:18939;Parent=Msa0861720-mRNA-1
chr5_4 exon 61151859 61151979 61151859 ID=Msa0861720-mRNA-1:exon:18938;Parent=Msa0861720-mRNA-1
chr5_4 exon 61152086 61152178 61152086 ID=Msa0861720-mRNA-1:exon:18937;Parent=Msa0861720-mRNA-1
chr5_4 exon 61154919 61155056 61154919 ID=Msa0861720-mRNA-1:exon:18936;Parent=Msa0861720-mRNA-1
chr5_4 exon 61156545 61156672 61156545 ID=Msa0861720-mRNA-1:exon:18935;Parent=Msa0861720-mRNA-1
chr5_4 exon 61156750 61156910 61156750 ID=Msa0861720-mRNA-1:exon:18934;Parent=Msa0861720-mRNA-1
chr5_4 exon 61157017 61157136 61157017 ID=Msa0861720-mRNA-1:exon:18933;Parent=Msa0861720-mRNA-1
chr5_4 exon 61158667 61158745 61158667 ID=Msa0861720-mRNA-1:exon:18932;Parent=Msa0861720-mRNA-1
chr5_4 exon 61158858 61159103 61158858 ID=Msa0861720-mRNA-1:exon:18931;Parent=Msa0861720-mRNA-1
chr5_4 five_prime_UTR 61158988 61159103 61158988 ID=Msa0861720-mRNA-1:five_prime_utr;Parent=Msa0861720-mRNA-1
chr5_4 CDS 61158858 61158987 61158858 ID=Msa0861720-mRNA-1:cds;Parent=Msa0861720-mRNA-1
chr5_4 CDS 61158667 61158745 61158667 ID=Msa0861720-mRNA-1:cds;Parent=Msa0861720-mRNA-1
chr5_4 CDS 61157017 61157136 61157017 ID=Msa0861720-mRNA-1:cds;Parent=Msa0861720-mRNA-1
chr5_4 CDS 61156750 61156910 61156750 ID=Msa0861720-mRNA-1:cds;Parent=Msa0861720-mRNA-1
chr5_4 CDS 61156545 61156672 61156545 ID=Msa0861720-mRNA-1:cds;Parent=Msa0861720-mRNA-1
chr5_4 CDS 61154919 61155056 61154919 ID=Msa0861720-mRNA-1:cds;Parent=Msa0861720-mRNA-1
chr5_4 CDS 61152086 61152178 61152086 ID=Msa0861720-mRNA-1:cds;Parent=Msa0861720-mRNA-1
chr5_4 CDS 61151859 61151979 61151859 ID=Msa0861720-mRNA-1:cds;Parent=Msa0861720-mRNA-1
chr5_4 CDS 61151622 61151752 61151622 ID=Msa0861720-mRNA-1:cds;Parent=Msa0861720-mRNA-1
chr5_4 three_prime_UTR 61150924 61151621 61150924 ID=Msa0861720-mRNA-1:three_prime_utr;Parent=Msa0861720-mRNA-1
Gene Sequence

>Msa0861720

ATGGGTCTGTCGAATGAGAATGTAACAGGTCTCATTCTAGCGTTGGCTTCAAGTTTGTTCATTGGTTCAAGTTTCATTATCAAGAAACAAGGTCTTCGAAGAGCAGCTTCTACTTATGGTGTTAGGGCTGGTGTTGGTGGTTATTATTATCTATTGGAACCACTATGGTGGGTAGGGATGATCACAAGTAAGCTTTTCCTTCTTCCTAGAATCTTTTTCTGTATGGTCTCTTGTTCAGTGATTGTAGGAGAGGTTGCAAATTTTGTTGCATATGCTTTTGCTCCTGCTGTTCTAGTTACCCCTCTCGGTGCATTAAGTATTATTGTGAGTGCTGTTTTAGCTGACCTTATTCTGAAAGAGAGGCTACACAAGCTTGGGATATTAGGCTGTGTGATGTGCATTGCTGGTTCTATCATTATTGTTATTCACGCTCCTAAAGAGGATCCTATCACATCTGTTCTGGAGATATGGAATATGGCTACTCAACCAGCATTCCTAGCATATGTTGGGTCTGTATTAGTACTGGTCTTCTTTATGGTTTTCCATTTTGCACCAACATGTGGACATACCAATGTCCTAGTTTATACAGGCATTTGTTCGTTGATGGGTTCCCTCTCTGTGATGAGCGTCAAAGCACTTGGAACTTCTTTGAAGTTAACTTTTGAAGGGAACAATCAGTTAGTTTATCCACAGACATGGTTTTTCATGTTAGTTGTGGCCATATGCGTCGTCATGCAAATGAATTATCTTAATAAGGCACTTGACACCTTCAACACGGCAATCGTGTCTCCTATATACTATGTCATGTTTACAACACTTACAATATTGGCCAGTGTAATAATGTTCAAGGATTGGGATGGCCAAAGTTTTTCAACTATTATGTCAGAAATATGTGGCTTTATTGTTGTACTCTCTGGCACAATAATGTTACATCTGACCAAGGACTTCGAGAGAAGCCATTCTTTTAGAGGTGGCGGCTTGCCTTCTTCGCCTACATTATCTGTCCGGCTTTATACCGGAAATGGGGACTCGTTACTTAAGGAAGATGAAGAGAACGAATCTCCTGAGGATATGTGCTCAAGAAGACAAGATTTATGTTAG
Protein sequence

>Msa0861720

MGLSNENVTGLILALASSLFIGSSFIIKKQGLRRAASTYGVRAGVGGYYYLLEPLWWVGMITSKLFLLPRIFFCMVSCSVIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLADLILKERLHKLGILGCVMCIAGSIIIVIHAPKEDPITSVLEIWNMATQPAFLAYVGSVLVLVFFMVFHFAPTCGHTNVLVYTGICSLMGSLSVMSVKALGTSLKLTFEGNNQLVYPQTWFFMLVVAICVVMQMNYLNKALDTFNTAIVSPIYYVMFTTLTILASVIMFKDWDGQSFSTIMSEICGFIVVLSGTIMLHLTKDFERSHSFRGGGLPSSPTLSVRLYTGNGDSLLKEDEENESPEDMCSRRQDLC*