Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0863910 | XP_039690131.1 | 85.271 | 258 | 32 | 3 | 2 | 256 | 303 | 557 | 3.63e-111 | 341 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0863910 | G7K4I5 | 85.271 | 258 | 32 | 3 | 2 | 256 | 303 | 557 | 1.73e-111 | 341 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0251240 | Msa0863910 | 0.804261 | 2.351438e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0863910 | MtrunA17_Chr5g0445771 | 46.181 | 288 | 105 | 6 | 2 | 256 | 234 | 504 | 3.88e-60 | 197 |
| Msa0863910 | MtrunA17_Chr5g0445861 | 89.916 | 119 | 12 | 0 | 2 | 120 | 303 | 421 | 1.43e-59 | 194 |
| Msa0863910 | MtrunA17_Chr5g0445821 | 81.982 | 111 | 14 | 2 | 146 | 256 | 3 | 107 | 1.50e-45 | 148 |
| Msa0863910 | MtrunA17_Chr5g0445881 | 48.162 | 272 | 89 | 6 | 3 | 255 | 230 | 468 | 9.41e-43 | 151 |
| Msa0863910 | MtrunA17_Chr5g0445871 | 44.726 | 237 | 82 | 4 | 33 | 255 | 4 | 205 | 4.80e-41 | 140 |
| Msa0863910 | MtrunA17_Chr5g0445801 | 72.072 | 111 | 28 | 2 | 146 | 256 | 3 | 110 | 1.80e-36 | 125 |
| Msa0863910 | MtrunA17_Chr5g0445851 | 78.070 | 114 | 19 | 3 | 146 | 256 | 3 | 113 | 3.02e-30 | 109 |
| Msa0863910 | MtrunA17_Chr5g0446181 | 34.630 | 257 | 93 | 8 | 2 | 256 | 188 | 371 | 3.26e-25 | 102 |
| Msa0863910 | MtrunA17_Chr5g0445961 | 60.938 | 64 | 25 | 0 | 2 | 65 | 334 | 397 | 2.49e-15 | 75.1 |
| Msa0863910 | MtrunA17_Chr1g0185261 | 46.296 | 108 | 50 | 2 | 2 | 109 | 120 | 219 | 9.97e-14 | 68.6 |
| Msa0863910 | MtrunA17_Chr5g0445831 | 42.727 | 110 | 47 | 2 | 2 | 111 | 311 | 404 | 1.02e-13 | 70.1 |
| Msa0863910 | MtrunA17_Chr5g0434151 | 49.231 | 65 | 27 | 1 | 140 | 204 | 18 | 76 | 1.18e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 50 sgRNAs with CRISPR-Local
Find 288 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAAACAGTGAACATGAATT+TGG | 0.301643 | 5_4:+64019869 | None:intergenic |
| GTCAACTGCATTTGCAAACT+TGG | 0.313248 | 5_4:-64022027 | None:intergenic |
| GGGAACAATGAAAGTGAAAA+AGG | 0.356316 | 5_4:+64021854 | Msa0863910:CDS |
| CCATTAGAGTCTGAAGTTAA+AGG | 0.357671 | 5_4:+64020215 | Msa0863910:CDS |
| CATGAAAATGAGGCTATTTA+CGG | 0.357866 | 5_4:+64021945 | Msa0863910:CDS |
| AGGAAAACGGTTGTGATTGC+AGG | 0.372754 | 5_4:+64021194 | Msa0863910:CDS |
| GAAGACGGTCATCACTCTTA+TGG | 0.390645 | 5_4:+64020146 | Msa0863910:CDS |
| AGCAGGTGAAAAGTCTTTGA+TGG | 0.396428 | 5_4:+64021154 | Msa0863910:intron |
| CCTTTAACTTCAGACTCTAA+TGG | 0.406627 | 5_4:-64020215 | None:intergenic |
| CACTCTTATGGAGTAGTTGC+CGG | 0.420211 | 5_4:+64020158 | Msa0863910:CDS |
| CACAAGAAAGCCCAGGAAAA+CGG | 0.469559 | 5_4:+64021181 | Msa0863910:CDS |
| TTTGTTCAGCGGCTGAGTAC+CGG | 0.478342 | 5_4:-64020177 | None:intergenic |
| GTACTCAGCCGCTGAACAAA+GGG | 0.485032 | 5_4:+64020180 | Msa0863910:CDS |
| AATGTTGGTGGCAATGAGGT+TGG | 0.498941 | 5_4:+64020083 | Msa0863910:CDS |
| ATCAAGAAACGACGAATCAT+CGG | 0.501890 | 5_4:-64022111 | None:intergenic |
| ATTAGCGGATGAGAAATGTA+AGG | 0.507977 | 5_4:+64019926 | Msa0863910:CDS |
| AGTGTAGATGCCTCTGGTGG+TGG | 0.536824 | 5_4:+64020038 | Msa0863910:CDS |
| TCAATGAGTGTAGATGCCTC+TGG | 0.542665 | 5_4:+64020032 | Msa0863910:CDS |
| ATCTACACTCATTGAAAGGT+TGG | 0.545608 | 5_4:-64020024 | None:intergenic |
| ACTAGTGATGAACTTGGACT+TGG | 0.557941 | 5_4:-64021990 | None:intergenic |
| GGTACTCAGCCGCTGAACAA+AGG | 0.561477 | 5_4:+64020179 | Msa0863910:CDS |
| TCAAGGAGTACATGAAAATG+AGG | 0.563748 | 5_4:+64021935 | Msa0863910:CDS |
| ATGACGACGATGATGAAGAT+TGG | 0.566034 | 5_4:+64021904 | Msa0863910:CDS |
| TGAACTACTAGTGATGAACT+TGG | 0.570588 | 5_4:-64021996 | None:intergenic |
| AAGGTTTCACTGTCGCTGAA+AGG | 0.573505 | 5_4:-64022068 | None:intergenic |
| GTTGTGATTGCAGGATCTAG+TGG | 0.575882 | 5_4:+64021203 | Msa0863910:CDS |
| CATCGTCGTCATCATCATCA+AGG | 0.576941 | 5_4:-64021893 | None:intergenic |
| TGAAAGAGTTGCAAGGTTGA+AGG | 0.579576 | 5_4:+64019995 | Msa0863910:CDS |
| GAACGAAAACAGAAAATTAG+CGG | 0.585365 | 5_4:+64019911 | Msa0863910:CDS |
| TCTTTGCTCCCTTTGTTCAG+CGG | 0.604084 | 5_4:-64020188 | None:intergenic |
| GTTTGCAAATGCAGTTGACA+CGG | 0.612742 | 5_4:+64022031 | Msa0863910:CDS |
| AGGCATCTACACTCATTGAA+AGG | 0.614901 | 5_4:-64020028 | None:intergenic |
| TTAGCGGATGAGAAATGTAA+GGG | 0.618078 | 5_4:+64019927 | Msa0863910:CDS |
| CATTGCATGAAAGAGTTGCA+AGG | 0.620518 | 5_4:+64019988 | Msa0863910:CDS |
| AGAGTTGCAAGGTTGAAGGA+TGG | 0.621649 | 5_4:+64019999 | Msa0863910:CDS |
| TGGTGTACACAAGAAAGCCC+AGG | 0.634670 | 5_4:+64021174 | Msa0863910:CDS |
| GGTGGAAACGATGACGTGGA+TGG | 0.636584 | 5_4:+64020056 | Msa0863910:CDS |
| TTCTTGATAATCTTACAACA+AGG | 0.643158 | 5_4:+64022126 | Msa0863910:CDS |
| GTGATTGCAGGATCTAGTGG+AGG | 0.648498 | 5_4:+64021206 | Msa0863910:CDS |
| TGGCAATTATAAGCGAGCTG+AGG | 0.655702 | 5_4:+64019889 | Msa0863910:CDS |
| GAAGATTGGTGTATGTCTCA+AGG | 0.655752 | 5_4:+64021918 | Msa0863910:CDS |
| GTGGATGGAGAGAATGTTGG+TGG | 0.665079 | 5_4:+64020071 | Msa0863910:CDS |
| TCTTTGCAGAGAAACGAAGA+CGG | 0.674592 | 5_4:+64020131 | Msa0863910:CDS |
| ATGAGTGTAGATGCCTCTGG+TGG | 0.681194 | 5_4:+64020035 | Msa0863910:CDS |
| AGAGAATGTTGGTGGCAATG+AGG | 0.682533 | 5_4:+64020079 | Msa0863910:CDS |
| GACGTGGATGGAGAGAATGT+TGG | 0.683270 | 5_4:+64020068 | Msa0863910:CDS |
| TGAGGTTGGAAATGACATTG+TGG | 0.683603 | 5_4:+64020097 | Msa0863910:CDS |
| AAGAAACGACGAATCATCGG+AGG | 0.695327 | 5_4:-64022108 | None:intergenic |
| TGGTGGTGGAAACGATGACG+TGG | 0.695643 | 5_4:+64020052 | Msa0863910:CDS |
| GTCATCGTTTCCACCACCAG+AGG | 0.705777 | 5_4:-64020048 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATGAATAAAATCAAGTA+AGG | + | chr5_4:64020660-64020679 | Msa0863910:intron | 15.0% |
| !!! | TCATATTTCATTTTTTTACA+TGG | - | chr5_4:64021564-64021583 | None:intergenic | 15.0% |
| !! | TGAAATCATATATAGTTAAT+TGG | + | chr5_4:64021660-64021679 | Msa0863910:intron | 15.0% |
| !! | TAAATGAATAAAATCAAGTA+AGG | + | chr5_4:64020660-64020679 | Msa0863910:intron | 15.0% |
| !!! | TCATATTTCATTTTTTTACA+TGG | - | chr5_4:64021564-64021583 | None:intergenic | 15.0% |
| !! | TGAAATCATATATAGTTAAT+TGG | + | chr5_4:64021660-64021679 | Msa0863910:intron | 15.0% |
| !! | TTATGCTTACAATAAATGTT+TGG | + | chr5_4:64020258-64020277 | Msa0863910:intron | 20.0% |
| !!! | TCATTTATCATTTTTGTTTC+TGG | - | chr5_4:64020647-64020666 | None:intergenic | 20.0% |
| !!! | ATTCTAGTTTCTAAAATATC+AGG | - | chr5_4:64020840-64020859 | None:intergenic | 20.0% |
| !! | AACTAAAAAATTGACACTTT+AGG | - | chr5_4:64021461-64021480 | None:intergenic | 20.0% |
| !!! | ATGTTTTTGAATAGAAGAAA+TGG | - | chr5_4:64021490-64021509 | None:intergenic | 20.0% |
| !!! | GTTTTTAAGAAAACTCATTT+TGG | + | chr5_4:64021590-64021609 | Msa0863910:intron | 20.0% |
| !! | TTATGCTTACAATAAATGTT+TGG | + | chr5_4:64020258-64020277 | Msa0863910:intron | 20.0% |
| !!! | TCATTTATCATTTTTGTTTC+TGG | - | chr5_4:64020647-64020666 | None:intergenic | 20.0% |
| !!! | ATTCTAGTTTCTAAAATATC+AGG | - | chr5_4:64020840-64020859 | None:intergenic | 20.0% |
| !! | AACTAAAAAATTGACACTTT+AGG | - | chr5_4:64021461-64021480 | None:intergenic | 20.0% |
| !!! | ATGTTTTTGAATAGAAGAAA+TGG | - | chr5_4:64021490-64021509 | None:intergenic | 20.0% |
| !!! | GTTTTTAAGAAAACTCATTT+TGG | + | chr5_4:64021590-64021609 | Msa0863910:intron | 20.0% |
| ! | TATCGAATTTAATGTTCCTA+AGG | - | chr5_4:64020305-64020324 | None:intergenic | 25.0% |
| ! | TTAAATTCGATATGTGTGAT+CGG | + | chr5_4:64020313-64020332 | Msa0863910:intron | 25.0% |
| ! | TCAATGCATATAGCTATAAA+TGG | - | chr5_4:64020437-64020456 | None:intergenic | 25.0% |
| ! | AATCGTTTAAGGAAAAAATG+TGG | - | chr5_4:64020500-64020519 | None:intergenic | 25.0% |
| !!! | ATTATCCTTTTTTCCTCTTT+AGG | + | chr5_4:64021076-64021095 | Msa0863910:intron | 25.0% |
| !! | TACATGTTTCTTTTATCAAC+AGG | - | chr5_4:64021326-64021345 | None:intergenic | 25.0% |
| !! | AAAAGAAACATGTACTCTTT+TGG | + | chr5_4:64021332-64021351 | Msa0863910:intron | 25.0% |
| !! | TTCGTTTCTGTTCTTTTTAT+AGG | + | chr5_4:64021395-64021414 | Msa0863910:intron | 25.0% |
| !!! | AACTCATTTTGGTTTTTATC+AGG | + | chr5_4:64021601-64021620 | Msa0863910:intron | 25.0% |
| ! | AAATCTTGGAAAATAAGGAA+TGG | - | chr5_4:64021761-64021780 | None:intergenic | 25.0% |
| !! | AAACATATCTCTTTTATGCT+AGG | + | chr5_4:64021828-64021847 | Msa0863910:intron | 25.0% |
| !! | TTCTTGATAATCTTACAACA+AGG | + | chr5_4:64022126-64022145 | Msa0863910:CDS | 25.0% |
| ! | TATCGAATTTAATGTTCCTA+AGG | - | chr5_4:64020305-64020324 | None:intergenic | 25.0% |
| ! | TTAAATTCGATATGTGTGAT+CGG | + | chr5_4:64020313-64020332 | Msa0863910:intron | 25.0% |
| ! | TCAATGCATATAGCTATAAA+TGG | - | chr5_4:64020437-64020456 | None:intergenic | 25.0% |
| ! | AATCGTTTAAGGAAAAAATG+TGG | - | chr5_4:64020500-64020519 | None:intergenic | 25.0% |
| !!! | ATTATCCTTTTTTCCTCTTT+AGG | + | chr5_4:64021076-64021095 | Msa0863910:intron | 25.0% |
| !! | TACATGTTTCTTTTATCAAC+AGG | - | chr5_4:64021326-64021345 | None:intergenic | 25.0% |
| !! | AAAAGAAACATGTACTCTTT+TGG | + | chr5_4:64021332-64021351 | Msa0863910:intron | 25.0% |
| !! | TTCGTTTCTGTTCTTTTTAT+AGG | + | chr5_4:64021395-64021414 | Msa0863910:intron | 25.0% |
| !!! | AACTCATTTTGGTTTTTATC+AGG | + | chr5_4:64021601-64021620 | Msa0863910:intron | 25.0% |
| ! | AAATCTTGGAAAATAAGGAA+TGG | - | chr5_4:64021761-64021780 | None:intergenic | 25.0% |
| !! | AAACATATCTCTTTTATGCT+AGG | + | chr5_4:64021828-64021847 | Msa0863910:intron | 25.0% |
| !! | TTCTTGATAATCTTACAACA+AGG | + | chr5_4:64022126-64022145 | Msa0863910:CDS | 25.0% |
| GAACGAAAACAGAAAATTAG+CGG | + | chr5_4:64019911-64019930 | Msa0863910:CDS | 30.0% | |
| CATGTTATGAATACTACCTT+AGG | + | chr5_4:64020286-64020305 | Msa0863910:intron | 30.0% | |
| ! | TGATCGGATAAATGTTTTGT+TGG | + | chr5_4:64020329-64020348 | Msa0863910:intron | 30.0% |
| AACAAGGCTATTAGCAAAAT+GGG | + | chr5_4:64020559-64020578 | Msa0863910:intron | 30.0% | |
| GAAACTCATTATATTTCCCT+CGG | + | chr5_4:64020682-64020701 | Msa0863910:intron | 30.0% | |
| TTTCAGATAAGATATACAGC+AGG | - | chr5_4:64020727-64020746 | None:intergenic | 30.0% | |
| GAATTTAGAAACAGATGTTG+TGG | + | chr5_4:64021050-64021069 | Msa0863910:intron | 30.0% | |
| GAATTGGCATAGTTGTTTAA+GGG | + | chr5_4:64021262-64021281 | Msa0863910:intron | 30.0% | |
| TAGAGAATAAAGCATGTGAA+TGG | + | chr5_4:64021293-64021312 | Msa0863910:intron | 30.0% | |
| TGGAAAGAAAACTTGATCAA+AGG | - | chr5_4:64021544-64021563 | None:intergenic | 30.0% | |
| ! | TAGTTAATTGGTTTAAGAGC+CGG | + | chr5_4:64021672-64021691 | Msa0863910:intron | 30.0% |
| GAGCAAAATCTTGGAAAATA+AGG | - | chr5_4:64021766-64021785 | None:intergenic | 30.0% | |
| ! | TATCTCTTTTATGCTAGGTA+TGG | + | chr5_4:64021833-64021852 | Msa0863910:intron | 30.0% |
| ! | ATCTCTTTTATGCTAGGTAT+GGG | + | chr5_4:64021834-64021853 | Msa0863910:intron | 30.0% |
| CATGAAAATGAGGCTATTTA+CGG | + | chr5_4:64021945-64021964 | Msa0863910:CDS | 30.0% | |
| !!! | CTTTTTTGCAAGTGATATTG+TGG | - | chr5_4:64022153-64022172 | None:intergenic | 30.0% |
| GAACGAAAACAGAAAATTAG+CGG | + | chr5_4:64019911-64019930 | Msa0863910:CDS | 30.0% | |
| CATGTTATGAATACTACCTT+AGG | + | chr5_4:64020286-64020305 | Msa0863910:intron | 30.0% | |
| ! | TGATCGGATAAATGTTTTGT+TGG | + | chr5_4:64020329-64020348 | Msa0863910:intron | 30.0% |
| AACAAGGCTATTAGCAAAAT+GGG | + | chr5_4:64020559-64020578 | Msa0863910:intron | 30.0% | |
| GAAACTCATTATATTTCCCT+CGG | + | chr5_4:64020682-64020701 | Msa0863910:intron | 30.0% | |
| TTTCAGATAAGATATACAGC+AGG | - | chr5_4:64020727-64020746 | None:intergenic | 30.0% | |
| GAATTTAGAAACAGATGTTG+TGG | + | chr5_4:64021050-64021069 | Msa0863910:intron | 30.0% | |
| GAATTGGCATAGTTGTTTAA+GGG | + | chr5_4:64021262-64021281 | Msa0863910:intron | 30.0% | |
| TAGAGAATAAAGCATGTGAA+TGG | + | chr5_4:64021293-64021312 | Msa0863910:intron | 30.0% | |
| TGGAAAGAAAACTTGATCAA+AGG | - | chr5_4:64021544-64021563 | None:intergenic | 30.0% | |
| ! | TAGTTAATTGGTTTAAGAGC+CGG | + | chr5_4:64021672-64021691 | Msa0863910:intron | 30.0% |
| GAGCAAAATCTTGGAAAATA+AGG | - | chr5_4:64021766-64021785 | None:intergenic | 30.0% | |
| ! | TATCTCTTTTATGCTAGGTA+TGG | + | chr5_4:64021833-64021852 | Msa0863910:intron | 30.0% |
| ! | ATCTCTTTTATGCTAGGTAT+GGG | + | chr5_4:64021834-64021853 | Msa0863910:intron | 30.0% |
| CATGAAAATGAGGCTATTTA+CGG | + | chr5_4:64021945-64021964 | Msa0863910:CDS | 30.0% | |
| !!! | CTTTTTTGCAAGTGATATTG+TGG | - | chr5_4:64022153-64022172 | None:intergenic | 30.0% |
| ! | ATTAGCGGATGAGAAATGTA+AGG | + | chr5_4:64019926-64019945 | Msa0863910:CDS | 35.0% |
| ! | TTAGCGGATGAGAAATGTAA+GGG | + | chr5_4:64019927-64019946 | Msa0863910:CDS | 35.0% |
| ATCTACACTCATTGAAAGGT+TGG | - | chr5_4:64020027-64020046 | None:intergenic | 35.0% | |
| ! | CCTTTAACTTCAGACTCTAA+TGG | - | chr5_4:64020218-64020237 | None:intergenic | 35.0% |
| ! | CCATTAGAGTCTGAAGTTAA+AGG | + | chr5_4:64020215-64020234 | Msa0863910:CDS | 35.0% |
| !! | CGGATAAATGTTTTGTTGGA+TGG | + | chr5_4:64020333-64020352 | Msa0863910:intron | 35.0% |
| !! | TAAATGTTTTGTTGGATGGC+AGG | + | chr5_4:64020337-64020356 | Msa0863910:intron | 35.0% |
| !! | AAATGTTTTGTTGGATGGCA+GGG | + | chr5_4:64020338-64020357 | Msa0863910:intron | 35.0% |
| ! | TCCTTAAACGATTTTCATCG+TGG | + | chr5_4:64020507-64020526 | Msa0863910:intron | 35.0% |
| TCCACGATGAAAATCGTTTA+AGG | - | chr5_4:64020511-64020530 | None:intergenic | 35.0% | |
| !!! | CATTTTGCTAATAGCCTTGT+TGG | - | chr5_4:64020560-64020579 | None:intergenic | 35.0% |
| CAACAAGGCTATTAGCAAAA+TGG | + | chr5_4:64020558-64020577 | Msa0863910:intron | 35.0% | |
| ACAAGGCTATTAGCAAAATG+GGG | + | chr5_4:64020560-64020579 | Msa0863910:intron | 35.0% | |
| AAGCTCCTAAAGAGGAAAAA+AGG | - | chr5_4:64021084-64021103 | None:intergenic | 35.0% | |
| ACACAAATAAGCTCCTAAAG+AGG | - | chr5_4:64021092-64021111 | None:intergenic | 35.0% | |
| GGAATTGGCATAGTTGTTTA+AGG | + | chr5_4:64021261-64021280 | Msa0863910:intron | 35.0% | |
| GAAAACTTGATCAAAGGATG+AGG | - | chr5_4:64021538-64021557 | None:intergenic | 35.0% | |
| ! | GTTGGATTTTCCTTGAAATG+CGG | + | chr5_4:64021697-64021716 | Msa0863910:intron | 35.0% |
| ACAATACTCGAGCAAAATCT+TGG | - | chr5_4:64021775-64021794 | None:intergenic | 35.0% | |
| GGGAACAATGAAAGTGAAAA+AGG | + | chr5_4:64021854-64021873 | Msa0863910:CDS | 35.0% | |
| ! | TCAAGGAGTACATGAAAATG+AGG | + | chr5_4:64021935-64021954 | Msa0863910:CDS | 35.0% |
| TGAACTACTAGTGATGAACT+TGG | - | chr5_4:64021999-64022018 | None:intergenic | 35.0% | |
| ATCAAGAAACGACGAATCAT+CGG | - | chr5_4:64022114-64022133 | None:intergenic | 35.0% | |
| ! | ATTAGCGGATGAGAAATGTA+AGG | + | chr5_4:64019926-64019945 | Msa0863910:CDS | 35.0% |
| ! | TTAGCGGATGAGAAATGTAA+GGG | + | chr5_4:64019927-64019946 | Msa0863910:CDS | 35.0% |
| ATCTACACTCATTGAAAGGT+TGG | - | chr5_4:64020027-64020046 | None:intergenic | 35.0% | |
| ! | CCTTTAACTTCAGACTCTAA+TGG | - | chr5_4:64020218-64020237 | None:intergenic | 35.0% |
| ! | CCATTAGAGTCTGAAGTTAA+AGG | + | chr5_4:64020215-64020234 | Msa0863910:CDS | 35.0% |
| !! | CGGATAAATGTTTTGTTGGA+TGG | + | chr5_4:64020333-64020352 | Msa0863910:intron | 35.0% |
| !! | TAAATGTTTTGTTGGATGGC+AGG | + | chr5_4:64020337-64020356 | Msa0863910:intron | 35.0% |
| !! | AAATGTTTTGTTGGATGGCA+GGG | + | chr5_4:64020338-64020357 | Msa0863910:intron | 35.0% |
| ! | TCCTTAAACGATTTTCATCG+TGG | + | chr5_4:64020507-64020526 | Msa0863910:intron | 35.0% |
| TCCACGATGAAAATCGTTTA+AGG | - | chr5_4:64020511-64020530 | None:intergenic | 35.0% | |
| !!! | CATTTTGCTAATAGCCTTGT+TGG | - | chr5_4:64020560-64020579 | None:intergenic | 35.0% |
| CAACAAGGCTATTAGCAAAA+TGG | + | chr5_4:64020558-64020577 | Msa0863910:intron | 35.0% | |
| ACAAGGCTATTAGCAAAATG+GGG | + | chr5_4:64020560-64020579 | Msa0863910:intron | 35.0% | |
| AAGCTCCTAAAGAGGAAAAA+AGG | - | chr5_4:64021084-64021103 | None:intergenic | 35.0% | |
| ACACAAATAAGCTCCTAAAG+AGG | - | chr5_4:64021092-64021111 | None:intergenic | 35.0% | |
| GGAATTGGCATAGTTGTTTA+AGG | + | chr5_4:64021261-64021280 | Msa0863910:intron | 35.0% | |
| GAAAACTTGATCAAAGGATG+AGG | - | chr5_4:64021538-64021557 | None:intergenic | 35.0% | |
| ! | GTTGGATTTTCCTTGAAATG+CGG | + | chr5_4:64021697-64021716 | Msa0863910:intron | 35.0% |
| ACAATACTCGAGCAAAATCT+TGG | - | chr5_4:64021775-64021794 | None:intergenic | 35.0% | |
| GGGAACAATGAAAGTGAAAA+AGG | + | chr5_4:64021854-64021873 | Msa0863910:CDS | 35.0% | |
| ! | TCAAGGAGTACATGAAAATG+AGG | + | chr5_4:64021935-64021954 | Msa0863910:CDS | 35.0% |
| TGAACTACTAGTGATGAACT+TGG | - | chr5_4:64021999-64022018 | None:intergenic | 35.0% | |
| ATCAAGAAACGACGAATCAT+CGG | - | chr5_4:64022114-64022133 | None:intergenic | 35.0% | |
| CATTGCATGAAAGAGTTGCA+AGG | + | chr5_4:64019988-64020007 | Msa0863910:CDS | 40.0% | |
| TGAAAGAGTTGCAAGGTTGA+AGG | + | chr5_4:64019995-64020014 | Msa0863910:CDS | 40.0% | |
| AGGCATCTACACTCATTGAA+AGG | - | chr5_4:64020031-64020050 | None:intergenic | 40.0% | |
| TGAGGTTGGAAATGACATTG+TGG | + | chr5_4:64020097-64020116 | Msa0863910:CDS | 40.0% | |
| TCTTTGCAGAGAAACGAAGA+CGG | + | chr5_4:64020131-64020150 | Msa0863910:CDS | 40.0% | |
| GTGAAGAAGCAAAACCAACA+AGG | + | chr5_4:64020543-64020562 | Msa0863910:intron | 40.0% | |
| TGTCTTCGAGGCTGAAATTA+GGG | - | chr5_4:64020799-64020818 | None:intergenic | 40.0% | |
| TAATTTCAGCCTCGAAGACA+GGG | + | chr5_4:64020799-64020818 | Msa0863910:intron | 40.0% | |
| AACCATACTCACGACACAAT+TGG | - | chr5_4:64020895-64020914 | None:intergenic | 40.0% | |
| AGCAAGAAAGCCAAAGAAAG+TGG | + | chr5_4:64020933-64020952 | Msa0863910:intron | 40.0% | |
| GCCAAAGAAAGTGGTTGTTA+TGG | + | chr5_4:64020942-64020961 | Msa0863910:intron | 40.0% | |
| GCCATAACAACCACTTTCTT+TGG | - | chr5_4:64020946-64020965 | None:intergenic | 40.0% | |
| AAGAAAGTGGTTGTTATGGC+AGG | + | chr5_4:64020946-64020965 | Msa0863910:intron | 40.0% | |
| AGAAAGTGGTTGTTATGGCA+GGG | + | chr5_4:64020947-64020966 | Msa0863910:intron | 40.0% | |
| TTGTTATGGCAGGGTCTAAT+GGG | + | chr5_4:64020956-64020975 | Msa0863910:intron | 40.0% | |
| !! | GAAAGAGTACTGAATGAGAG+TGG | + | chr5_4:64021006-64021025 | Msa0863910:intron | 40.0% |
| ! | TAGCTCTTTTCGATTTCAGC+AGG | + | chr5_4:64021137-64021156 | Msa0863910:intron | 40.0% |
| AGCAGGTGAAAAGTCTTTGA+TGG | + | chr5_4:64021154-64021173 | Msa0863910:intron | 40.0% | |
| ! | TCCTGAAAGCATAGTGGAAT+TGG | + | chr5_4:64021246-64021265 | Msa0863910:intron | 40.0% |
| !!! | CTCTTTTGGAGCTTTTCTCT+AGG | + | chr5_4:64021346-64021365 | Msa0863910:intron | 40.0% |
| ! | CTCTAGGAAATGCTAGTACA+TGG | + | chr5_4:64021362-64021381 | Msa0863910:intron | 40.0% |
| ! | TTAATTGGTTTAAGAGCCGG+TGG | + | chr5_4:64021675-64021694 | Msa0863910:intron | 40.0% |
| TTCAAGGAAAATCCAACCAC+CGG | - | chr5_4:64021694-64021713 | None:intergenic | 40.0% | |
| ! | CTCGAGTATTGTGTCATGTT+TGG | + | chr5_4:64021783-64021802 | Msa0863910:intron | 40.0% |
| ATGACGACGATGATGAAGAT+TGG | + | chr5_4:64021904-64021923 | Msa0863910:CDS | 40.0% | |
| GAAGATTGGTGTATGTCTCA+AGG | + | chr5_4:64021918-64021937 | Msa0863910:CDS | 40.0% | |
| ACTAGTGATGAACTTGGACT+TGG | - | chr5_4:64021993-64022012 | None:intergenic | 40.0% | |
| GTCAACTGCATTTGCAAACT+TGG | - | chr5_4:64022030-64022049 | None:intergenic | 40.0% | |
| GTTTGCAAATGCAGTTGACA+CGG | + | chr5_4:64022031-64022050 | Msa0863910:CDS | 40.0% | |
| GGAAGAAGAAGAAGAAGTGA+AGG | - | chr5_4:64022090-64022109 | None:intergenic | 40.0% | |
| CATTGCATGAAAGAGTTGCA+AGG | + | chr5_4:64019988-64020007 | Msa0863910:CDS | 40.0% | |
| TGAAAGAGTTGCAAGGTTGA+AGG | + | chr5_4:64019995-64020014 | Msa0863910:CDS | 40.0% | |
| AGGCATCTACACTCATTGAA+AGG | - | chr5_4:64020031-64020050 | None:intergenic | 40.0% | |
| TGAGGTTGGAAATGACATTG+TGG | + | chr5_4:64020097-64020116 | Msa0863910:CDS | 40.0% | |
| TCTTTGCAGAGAAACGAAGA+CGG | + | chr5_4:64020131-64020150 | Msa0863910:CDS | 40.0% | |
| GTGAAGAAGCAAAACCAACA+AGG | + | chr5_4:64020543-64020562 | Msa0863910:intron | 40.0% | |
| TGTCTTCGAGGCTGAAATTA+GGG | - | chr5_4:64020799-64020818 | None:intergenic | 40.0% | |
| TAATTTCAGCCTCGAAGACA+GGG | + | chr5_4:64020799-64020818 | Msa0863910:intron | 40.0% | |
| AACCATACTCACGACACAAT+TGG | - | chr5_4:64020895-64020914 | None:intergenic | 40.0% | |
| AGCAAGAAAGCCAAAGAAAG+TGG | + | chr5_4:64020933-64020952 | Msa0863910:intron | 40.0% | |
| GCCAAAGAAAGTGGTTGTTA+TGG | + | chr5_4:64020942-64020961 | Msa0863910:intron | 40.0% | |
| GCCATAACAACCACTTTCTT+TGG | - | chr5_4:64020946-64020965 | None:intergenic | 40.0% | |
| AAGAAAGTGGTTGTTATGGC+AGG | + | chr5_4:64020946-64020965 | Msa0863910:intron | 40.0% | |
| AGAAAGTGGTTGTTATGGCA+GGG | + | chr5_4:64020947-64020966 | Msa0863910:intron | 40.0% | |
| TTGTTATGGCAGGGTCTAAT+GGG | + | chr5_4:64020956-64020975 | Msa0863910:intron | 40.0% | |
| !! | GAAAGAGTACTGAATGAGAG+TGG | + | chr5_4:64021006-64021025 | Msa0863910:intron | 40.0% |
| ! | TAGCTCTTTTCGATTTCAGC+AGG | + | chr5_4:64021137-64021156 | Msa0863910:intron | 40.0% |
| AGCAGGTGAAAAGTCTTTGA+TGG | + | chr5_4:64021154-64021173 | Msa0863910:intron | 40.0% | |
| ! | TCCTGAAAGCATAGTGGAAT+TGG | + | chr5_4:64021246-64021265 | Msa0863910:intron | 40.0% |
| !!! | CTCTTTTGGAGCTTTTCTCT+AGG | + | chr5_4:64021346-64021365 | Msa0863910:intron | 40.0% |
| ! | CTCTAGGAAATGCTAGTACA+TGG | + | chr5_4:64021362-64021381 | Msa0863910:intron | 40.0% |
| ! | TTAATTGGTTTAAGAGCCGG+TGG | + | chr5_4:64021675-64021694 | Msa0863910:intron | 40.0% |
| TTCAAGGAAAATCCAACCAC+CGG | - | chr5_4:64021694-64021713 | None:intergenic | 40.0% | |
| ! | CTCGAGTATTGTGTCATGTT+TGG | + | chr5_4:64021783-64021802 | Msa0863910:intron | 40.0% |
| ATGACGACGATGATGAAGAT+TGG | + | chr5_4:64021904-64021923 | Msa0863910:CDS | 40.0% | |
| GAAGATTGGTGTATGTCTCA+AGG | + | chr5_4:64021918-64021937 | Msa0863910:CDS | 40.0% | |
| ACTAGTGATGAACTTGGACT+TGG | - | chr5_4:64021993-64022012 | None:intergenic | 40.0% | |
| GTCAACTGCATTTGCAAACT+TGG | - | chr5_4:64022030-64022049 | None:intergenic | 40.0% | |
| GTTTGCAAATGCAGTTGACA+CGG | + | chr5_4:64022031-64022050 | Msa0863910:CDS | 40.0% | |
| GGAAGAAGAAGAAGAAGTGA+AGG | - | chr5_4:64022090-64022109 | None:intergenic | 40.0% | |
| TGGCAATTATAAGCGAGCTG+AGG | + | chr5_4:64019889-64019908 | Msa0863910:CDS | 45.0% | |
| AGAGTTGCAAGGTTGAAGGA+TGG | + | chr5_4:64019999-64020018 | Msa0863910:CDS | 45.0% | |
| TCAATGAGTGTAGATGCCTC+TGG | + | chr5_4:64020032-64020051 | Msa0863910:CDS | 45.0% | |
| !! | AGAGAATGTTGGTGGCAATG+AGG | + | chr5_4:64020079-64020098 | Msa0863910:CDS | 45.0% |
| !! | AATGTTGGTGGCAATGAGGT+TGG | + | chr5_4:64020083-64020102 | Msa0863910:CDS | 45.0% |
| GAAGACGGTCATCACTCTTA+TGG | + | chr5_4:64020146-64020165 | Msa0863910:CDS | 45.0% | |
| CACTCTTATGGAGTAGTTGC+CGG | + | chr5_4:64020158-64020177 | Msa0863910:CDS | 45.0% | |
| TCTTTGCTCCCTTTGTTCAG+CGG | - | chr5_4:64020191-64020210 | None:intergenic | 45.0% | |
| CCTGTAATCATGGTTACCGA+GGG | - | chr5_4:64020701-64020720 | None:intergenic | 45.0% | |
| TCCTGTAATCATGGTTACCG+AGG | - | chr5_4:64020702-64020721 | None:intergenic | 45.0% | |
| CAGCAGGTATCCTGTAATCA+TGG | - | chr5_4:64020711-64020730 | None:intergenic | 45.0% | |
| CGAGGCTGAAATTAGGGTTT+CGG | - | chr5_4:64020793-64020812 | None:intergenic | 45.0% | |
| CTGTCTTCGAGGCTGAAATT+AGG | - | chr5_4:64020800-64020819 | None:intergenic | 45.0% | |
| CTAATTTCAGCCTCGAAGAC+AGG | + | chr5_4:64020798-64020817 | Msa0863910:intron | 45.0% | |
| GACCAATTGTGTCGTGAGTA+TGG | + | chr5_4:64020890-64020909 | Msa0863910:intron | 45.0% | |
| TGTGTCGTGAGTATGGTTCA+AGG | + | chr5_4:64020897-64020916 | Msa0863910:intron | 45.0% | |
| GTGTCGTGAGTATGGTTCAA+GGG | + | chr5_4:64020898-64020917 | Msa0863910:intron | 45.0% | |
| AGTATGGTTCAAGGGTTGGA+TGG | + | chr5_4:64020906-64020925 | Msa0863910:intron | 45.0% | |
| GTTGTTATGGCAGGGTCTAA+TGG | + | chr5_4:64020955-64020974 | Msa0863910:intron | 45.0% | |
| ! | TGAATGAGAGTGGTGATGCA+GGG | + | chr5_4:64021016-64021035 | Msa0863910:intron | 45.0% |
| CACAAGAAAGCCCAGGAAAA+CGG | + | chr5_4:64021181-64021200 | Msa0863910:CDS | 45.0% | |
| ! | GCAATCACAACCGTTTTCCT+GGG | - | chr5_4:64021194-64021213 | None:intergenic | 45.0% |
| ! | TGCAATCACAACCGTTTTCC+TGG | - | chr5_4:64021195-64021214 | None:intergenic | 45.0% |
| AGGAAAACGGTTGTGATTGC+AGG | + | chr5_4:64021194-64021213 | Msa0863910:CDS | 45.0% | |
| GTTGTGATTGCAGGATCTAG+TGG | + | chr5_4:64021203-64021222 | Msa0863910:CDS | 45.0% | |
| ! | GTAGCATCCTGAAAGCATAG+TGG | + | chr5_4:64021240-64021259 | Msa0863910:intron | 45.0% |
| GCCAATTCCACTATGCTTTC+AGG | - | chr5_4:64021250-64021269 | None:intergenic | 45.0% | |
| CTAGTTGTCTCCGCATTTCA+AGG | - | chr5_4:64021710-64021729 | None:intergenic | 45.0% | |
| CATCGTCGTCATCATCATCA+AGG | - | chr5_4:64021896-64021915 | None:intergenic | 45.0% | |
| AAGGTTTCACTGTCGCTGAA+AGG | - | chr5_4:64022071-64022090 | None:intergenic | 45.0% | |
| AAGAAACGACGAATCATCGG+AGG | - | chr5_4:64022111-64022130 | None:intergenic | 45.0% | |
| TGGCAATTATAAGCGAGCTG+AGG | + | chr5_4:64019889-64019908 | Msa0863910:CDS | 45.0% | |
| AGAGTTGCAAGGTTGAAGGA+TGG | + | chr5_4:64019999-64020018 | Msa0863910:CDS | 45.0% | |
| TCAATGAGTGTAGATGCCTC+TGG | + | chr5_4:64020032-64020051 | Msa0863910:CDS | 45.0% | |
| !! | AGAGAATGTTGGTGGCAATG+AGG | + | chr5_4:64020079-64020098 | Msa0863910:CDS | 45.0% |
| !! | AATGTTGGTGGCAATGAGGT+TGG | + | chr5_4:64020083-64020102 | Msa0863910:CDS | 45.0% |
| GAAGACGGTCATCACTCTTA+TGG | + | chr5_4:64020146-64020165 | Msa0863910:CDS | 45.0% | |
| CACTCTTATGGAGTAGTTGC+CGG | + | chr5_4:64020158-64020177 | Msa0863910:CDS | 45.0% | |
| TCTTTGCTCCCTTTGTTCAG+CGG | - | chr5_4:64020191-64020210 | None:intergenic | 45.0% | |
| CCTGTAATCATGGTTACCGA+GGG | - | chr5_4:64020701-64020720 | None:intergenic | 45.0% | |
| TCCTGTAATCATGGTTACCG+AGG | - | chr5_4:64020702-64020721 | None:intergenic | 45.0% | |
| CAGCAGGTATCCTGTAATCA+TGG | - | chr5_4:64020711-64020730 | None:intergenic | 45.0% | |
| CGAGGCTGAAATTAGGGTTT+CGG | - | chr5_4:64020793-64020812 | None:intergenic | 45.0% | |
| CTGTCTTCGAGGCTGAAATT+AGG | - | chr5_4:64020800-64020819 | None:intergenic | 45.0% | |
| CTAATTTCAGCCTCGAAGAC+AGG | + | chr5_4:64020798-64020817 | Msa0863910:intron | 45.0% | |
| GACCAATTGTGTCGTGAGTA+TGG | + | chr5_4:64020890-64020909 | Msa0863910:intron | 45.0% | |
| TGTGTCGTGAGTATGGTTCA+AGG | + | chr5_4:64020897-64020916 | Msa0863910:intron | 45.0% | |
| GTGTCGTGAGTATGGTTCAA+GGG | + | chr5_4:64020898-64020917 | Msa0863910:intron | 45.0% | |
| AGTATGGTTCAAGGGTTGGA+TGG | + | chr5_4:64020906-64020925 | Msa0863910:intron | 45.0% | |
| GTTGTTATGGCAGGGTCTAA+TGG | + | chr5_4:64020955-64020974 | Msa0863910:intron | 45.0% | |
| ! | TGAATGAGAGTGGTGATGCA+GGG | + | chr5_4:64021016-64021035 | Msa0863910:intron | 45.0% |
| CACAAGAAAGCCCAGGAAAA+CGG | + | chr5_4:64021181-64021200 | Msa0863910:CDS | 45.0% | |
| ! | GCAATCACAACCGTTTTCCT+GGG | - | chr5_4:64021194-64021213 | None:intergenic | 45.0% |
| ! | TGCAATCACAACCGTTTTCC+TGG | - | chr5_4:64021195-64021214 | None:intergenic | 45.0% |
| AGGAAAACGGTTGTGATTGC+AGG | + | chr5_4:64021194-64021213 | Msa0863910:CDS | 45.0% | |
| GTTGTGATTGCAGGATCTAG+TGG | + | chr5_4:64021203-64021222 | Msa0863910:CDS | 45.0% | |
| ! | GTAGCATCCTGAAAGCATAG+TGG | + | chr5_4:64021240-64021259 | Msa0863910:intron | 45.0% |
| GCCAATTCCACTATGCTTTC+AGG | - | chr5_4:64021250-64021269 | None:intergenic | 45.0% | |
| CTAGTTGTCTCCGCATTTCA+AGG | - | chr5_4:64021710-64021729 | None:intergenic | 45.0% | |
| CATCGTCGTCATCATCATCA+AGG | - | chr5_4:64021896-64021915 | None:intergenic | 45.0% | |
| AAGGTTTCACTGTCGCTGAA+AGG | - | chr5_4:64022071-64022090 | None:intergenic | 45.0% | |
| AAGAAACGACGAATCATCGG+AGG | - | chr5_4:64022111-64022130 | None:intergenic | 45.0% | |
| ATGAGTGTAGATGCCTCTGG+TGG | + | chr5_4:64020035-64020054 | Msa0863910:CDS | 50.0% | |
| GACGTGGATGGAGAGAATGT+TGG | + | chr5_4:64020068-64020087 | Msa0863910:CDS | 50.0% | |
| GTGGATGGAGAGAATGTTGG+TGG | + | chr5_4:64020071-64020090 | Msa0863910:CDS | 50.0% | |
| TTTGTTCAGCGGCTGAGTAC+CGG | - | chr5_4:64020180-64020199 | None:intergenic | 50.0% | |
| GTACTCAGCCGCTGAACAAA+GGG | + | chr5_4:64020180-64020199 | Msa0863910:CDS | 50.0% | |
| TCATCGTGGATGCTCTCACT+TGG | + | chr5_4:64020521-64020540 | Msa0863910:intron | 50.0% | |
| CCCTCGGTAACCATGATTAC+AGG | + | chr5_4:64020698-64020717 | Msa0863910:intron | 50.0% | |
| CGTGAGTATGGTTCAAGGGT+TGG | + | chr5_4:64020902-64020921 | Msa0863910:intron | 50.0% | |
| TTATGGCAGGGTCTAATGGG+AGG | + | chr5_4:64020959-64020978 | Msa0863910:intron | 50.0% | |
| TATGGCAGGGTCTAATGGGA+GGG | + | chr5_4:64020960-64020979 | Msa0863910:intron | 50.0% | |
| ! | CTGAATGAGAGTGGTGATGC+AGG | + | chr5_4:64021015-64021034 | Msa0863910:intron | 50.0% |
| ! | GAATGAGAGTGGTGATGCAG+GGG | + | chr5_4:64021017-64021036 | Msa0863910:intron | 50.0% |
| TGGTGTACACAAGAAAGCCC+AGG | + | chr5_4:64021174-64021193 | Msa0863910:CDS | 50.0% | |
| GTGATTGCAGGATCTAGTGG+AGG | + | chr5_4:64021206-64021225 | Msa0863910:CDS | 50.0% | |
| TTGGTTTAAGAGCCGGTGGT+TGG | + | chr5_4:64021679-64021698 | Msa0863910:intron | 50.0% | |
| ATGAGTGTAGATGCCTCTGG+TGG | + | chr5_4:64020035-64020054 | Msa0863910:CDS | 50.0% | |
| GACGTGGATGGAGAGAATGT+TGG | + | chr5_4:64020068-64020087 | Msa0863910:CDS | 50.0% | |
| GTGGATGGAGAGAATGTTGG+TGG | + | chr5_4:64020071-64020090 | Msa0863910:CDS | 50.0% | |
| TTTGTTCAGCGGCTGAGTAC+CGG | - | chr5_4:64020180-64020199 | None:intergenic | 50.0% | |
| GTACTCAGCCGCTGAACAAA+GGG | + | chr5_4:64020180-64020199 | Msa0863910:CDS | 50.0% | |
| TCATCGTGGATGCTCTCACT+TGG | + | chr5_4:64020521-64020540 | Msa0863910:intron | 50.0% | |
| CCCTCGGTAACCATGATTAC+AGG | + | chr5_4:64020698-64020717 | Msa0863910:intron | 50.0% | |
| CGTGAGTATGGTTCAAGGGT+TGG | + | chr5_4:64020902-64020921 | Msa0863910:intron | 50.0% | |
| TTATGGCAGGGTCTAATGGG+AGG | + | chr5_4:64020959-64020978 | Msa0863910:intron | 50.0% | |
| TATGGCAGGGTCTAATGGGA+GGG | + | chr5_4:64020960-64020979 | Msa0863910:intron | 50.0% | |
| ! | CTGAATGAGAGTGGTGATGC+AGG | + | chr5_4:64021015-64021034 | Msa0863910:intron | 50.0% |
| ! | GAATGAGAGTGGTGATGCAG+GGG | + | chr5_4:64021017-64021036 | Msa0863910:intron | 50.0% |
| TGGTGTACACAAGAAAGCCC+AGG | + | chr5_4:64021174-64021193 | Msa0863910:CDS | 50.0% | |
| GTGATTGCAGGATCTAGTGG+AGG | + | chr5_4:64021206-64021225 | Msa0863910:CDS | 50.0% | |
| TTGGTTTAAGAGCCGGTGGT+TGG | + | chr5_4:64021679-64021698 | Msa0863910:intron | 50.0% | |
| AGTGTAGATGCCTCTGGTGG+TGG | + | chr5_4:64020038-64020057 | Msa0863910:CDS | 55.0% | |
| GTCATCGTTTCCACCACCAG+AGG | - | chr5_4:64020051-64020070 | None:intergenic | 55.0% | |
| !! | TGGTGGTGGAAACGATGACG+TGG | + | chr5_4:64020052-64020071 | Msa0863910:CDS | 55.0% |
| GGTGGAAACGATGACGTGGA+TGG | + | chr5_4:64020056-64020075 | Msa0863910:CDS | 55.0% | |
| GGTACTCAGCCGCTGAACAA+AGG | + | chr5_4:64020179-64020198 | Msa0863910:CDS | 55.0% | |
| AAGCACAGACCCTGTCTTCG+AGG | - | chr5_4:64020811-64020830 | None:intergenic | 55.0% | |
| GAAGACAGGGTCTGTGCTTC+AGG | + | chr5_4:64020812-64020831 | Msa0863910:intron | 55.0% | |
| AGTGTAGATGCCTCTGGTGG+TGG | + | chr5_4:64020038-64020057 | Msa0863910:CDS | 55.0% | |
| GTCATCGTTTCCACCACCAG+AGG | - | chr5_4:64020051-64020070 | None:intergenic | 55.0% | |
| !! | TGGTGGTGGAAACGATGACG+TGG | + | chr5_4:64020052-64020071 | Msa0863910:CDS | 55.0% |
| GGTGGAAACGATGACGTGGA+TGG | + | chr5_4:64020056-64020075 | Msa0863910:CDS | 55.0% | |
| GGTACTCAGCCGCTGAACAA+AGG | + | chr5_4:64020179-64020198 | Msa0863910:CDS | 55.0% | |
| AAGCACAGACCCTGTCTTCG+AGG | - | chr5_4:64020811-64020830 | None:intergenic | 55.0% | |
| GAAGACAGGGTCTGTGCTTC+AGG | + | chr5_4:64020812-64020831 | Msa0863910:intron | 55.0% | |
| ! | TGAGAGTGGTGATGCAGGGG+AGG | + | chr5_4:64021020-64021039 | Msa0863910:intron | 60.0% |
| ! | TGAGAGTGGTGATGCAGGGG+AGG | + | chr5_4:64021020-64021039 | Msa0863910:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 64019882 | 64022184 | 64019882 | ID=Msa0863910;Name=Msa0863910 |
| chr5_4 | mRNA | 64019882 | 64022184 | 64019882 | ID=Msa0863910-mRNA-1;Parent=Msa0863910;Name=Msa0863910-mRNA-1;_AED=0.41;_eAED=0.41;_QI=0|0|0|1|1|1|3|0|256 |
| chr5_4 | exon | 64019882 | 64020248 | 64019882 | ID=Msa0863910-mRNA-1:exon:20130;Parent=Msa0863910-mRNA-1 |
| chr5_4 | exon | 64021159 | 64021227 | 64021159 | ID=Msa0863910-mRNA-1:exon:20131;Parent=Msa0863910-mRNA-1 |
| chr5_4 | exon | 64021850 | 64022184 | 64021850 | ID=Msa0863910-mRNA-1:exon:20132;Parent=Msa0863910-mRNA-1 |
| chr5_4 | CDS | 64019882 | 64020248 | 64019882 | ID=Msa0863910-mRNA-1:cds;Parent=Msa0863910-mRNA-1 |
| chr5_4 | CDS | 64021159 | 64021227 | 64021159 | ID=Msa0863910-mRNA-1:cds;Parent=Msa0863910-mRNA-1 |
| chr5_4 | CDS | 64021850 | 64022184 | 64021850 | ID=Msa0863910-mRNA-1:cds;Parent=Msa0863910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
