AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0864760


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0864760 MtrunA17_Chr5g0447321 94.162 394 23 0 386 779 357 750 0.0 759
Msa0864760 MtrunA17_Chr5g0447321 84.337 83 12 1 253 334 160 242 9.81e-37 148
Msa0864760 MtrunA17_Chr5g0447301 95.880 267 11 0 1 267 1 267 0.0 523
Msa0864760 MtrunA17_Chr1g0174761 46.429 392 207 1 386 774 365 756 1.39e-117 373
Msa0864760 MtrunA17_Chr7g0258331 46.819 393 205 2 386 774 365 757 2.06e-117 372
Msa0864760 MtrunA17_Chr1g0174581 45.707 396 207 5 386 774 385 779 1.16e-110 355
Msa0864760 MtrunA17_Chr4g0033151 45.663 392 207 2 386 774 364 752 2.90e-106 343
Msa0864760 MtrunA17_Chr4g0028371 46.287 404 209 2 386 782 371 773 9.49e-106 342
Msa0864760 MtrunA17_Chr3g0087501 44.307 404 214 5 386 779 407 809 3.00e-105 342
Msa0864760 MtrunA17_Chr4g0010751 44.670 394 212 4 386 774 784 1176 3.72e-105 349
Msa0864760 MtrunA17_Chr4g0060191 42.211 398 218 4 386 775 628 1021 3.96e-100 333
Msa0864760 MtrunA17_Chr4g0014711 42.967 391 218 3 386 774 639 1026 1.22e-99 332
Msa0864760 MtrunA17_Chr5g0397601 41.624 394 221 5 386 774 600 989 4.01e-99 330
Msa0864760 MtrunA17_Chr8g0349231 40.561 392 226 2 386 774 598 985 7.67e-99 328
Msa0864760 MtrunA17_Chr4g0035961 43.069 404 171 3 386 782 371 722 3.45e-98 320
Msa0864760 MtrunA17_Chr6g0460791 39.447 398 232 2 386 779 604 996 1.08e-97 326
Msa0864760 MtrunA17_Chr7g0247271 39.898 391 230 2 386 774 561 948 3.44e-94 315
Msa0864760 MtrunA17_Chr1g0151051 40.920 413 228 3 383 779 373 785 1.21e-93 310
Msa0864760 MtrunA17_Chr2g0307671 56.087 230 98 2 44 271 62 290 3.57e-77 258
Msa0864760 MtrunA17_Chr6g0461151 36.567 402 243 5 385 774 607 1008 5.19e-76 266
Msa0864760 MtrunA17_Chr7g0265741 59.722 216 79 4 45 253 2 216 2.82e-73 246
Msa0864760 MtrunA17_Chr6g0476311 60.465 215 77 4 47 254 5 218 9.53e-73 244
Msa0864760 MtrunA17_Chr4g0010641 42.017 119 67 2 662 779 1 118 5.98e-21 89.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0864760 AT2G29560.1 81.716 268 47 1 1 266 1 268 4.01e-147 440
Msa0864760 AT3G57880.4 46.429 392 207 1 386 774 364 755 7.79e-118 374
Msa0864760 AT3G57880.2 46.429 392 207 1 386 774 364 755 7.79e-118 374
Msa0864760 AT3G57880.3 46.429 392 207 1 386 774 364 755 7.79e-118 374
Msa0864760 AT3G57880.1 46.429 392 207 1 386 774 364 755 7.79e-118 374
Msa0864760 AT1G51570.1 45.431 394 210 2 386 774 365 758 1.37e-113 363
Msa0864760 AT5G12970.1 43.878 392 213 2 386 774 364 751 1.55e-108 349
Msa0864760 AT5G06850.1 44.557 395 212 4 386 774 383 776 7.88e-106 343
Msa0864760 AT5G48060.1 43.467 398 221 2 386 779 626 1023 1.67e-103 342
Msa0864760 AT4G20080.1 43.325 397 205 5 386 770 363 751 3.50e-103 335
Msa0864760 AT1G74720.1 43.147 394 218 3 386 774 671 1063 1.64e-102 340
Msa0864760 AT4G11610.3 39.541 392 230 2 386 774 469 856 6.21e-100 329
Msa0864760 AT4G11610.2 39.541 392 230 2 386 774 602 989 5.05e-99 330
Msa0864760 AT4G11610.1 39.541 392 230 2 386 774 606 993 6.11e-99 330
Msa0864760 AT1G22610.1 42.199 391 221 3 386 774 624 1011 5.83e-98 327
Msa0864760 AT4G00700.1 41.414 396 220 3 386 774 598 988 1.21e-96 323
Msa0864760 AT4G00700.2 41.414 396 220 3 386 774 598 988 1.21e-96 323
Msa0864760 AT3G03680.1 39.340 394 234 2 386 774 606 999 3.91e-94 317
Msa0864760 AT3G61300.1 40.355 394 228 4 386 775 565 955 2.07e-93 314
Msa0864760 AT1G04150.1 43.797 395 212 4 386 774 604 994 2.93e-93 314
Msa0864760 AT5G17980.1 39.646 396 230 5 387 774 637 1031 5.56e-81 281
Msa0864760 AT1G74030.1 58.036 224 86 3 40 256 37 259 2.53e-76 255
Msa0864760 AT2G36530.1 59.361 219 81 4 45 256 2 219 2.39e-72 244
Msa0864760 AT3G61720.1 35.308 422 236 10 386 774 360 777 1.05e-64 231
Msa0864760 AT5G03435.1 35.484 403 215 14 386 773 351 723 2.21e-61 221
Msa0864760 AT2G36530.2 57.576 198 76 4 66 256 12 208 2.53e-61 213
Msa0864760 AT5G03435.2 44.550 211 108 5 386 592 351 556 6.91e-47 176

Find 159 sgRNAs with CRISPR-Local

Find 454 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAAATGACATCTTCGAATT+TGG 0.126917 5_4:+65297492 None:intergenic
CTTGTTCAACTTCAACCTTC+TGG 0.144743 5_4:-65298075 Msa0864760:CDS
ATGATTTCGTGTCTGATAAT+TGG 0.169783 5_4:-65297340 Msa0864760:CDS
CAATTAGATAATGTGCTAAT+TGG 0.209789 5_4:-65298940 Msa0864760:CDS
TAGAAGGATGCCTTCAAAAT+TGG 0.226142 5_4:-65297207 Msa0864760:CDS
GAGAACGGGGTCGGAGGTTT+TGG 0.248202 5_4:+65304687 None:intergenic
TGAGACCTATCATCATTTAA+AGG 0.262267 5_4:-65299798 Msa0864760:intron
GCCTATTGTGTAGCTAAATA+TGG 0.266902 5_4:-65298330 Msa0864760:CDS
CAGCTCAGTTATACGAATTA+AGG 0.282216 5_4:-65297930 Msa0864760:CDS
TTGTTCAACTTCAACCTTCT+GGG 0.302539 5_4:-65298074 Msa0864760:CDS
TCCGATATCTTGTCTTTGTT+TGG 0.302724 5_4:-65297294 Msa0864760:CDS
GATAATTGGGATTGCGGCTT+TGG 0.304173 5_4:-65297326 Msa0864760:CDS
CCTTGACAAAACAGAGAAAA+AGG 0.305149 5_4:-65302903 Msa0864760:intron
TTATACAAATTAGCTATAGA+AGG 0.307770 5_4:+65298006 None:intergenic
GGCTCTGACGGCGGCATTGA+CGG 0.326530 5_4:+65304708 None:intergenic
TGACGGCGTCTTCGAGTTTA+CGG 0.335239 5_4:+65304725 None:intergenic
TACAGCAAGTATAGATGAAT+TGG 0.342398 5_4:-65297539 Msa0864760:CDS
TCAAATCTGCTTGCTCCAAT+TGG 0.357446 5_4:+65299842 None:intergenic
TCCATTGCTGCATGTAAGGC+TGG 0.359024 5_4:-65301975 Msa0864760:CDS
CATTTCTACGATCGATTCTT+CGG 0.368421 5_4:+65304783 None:intergenic
AGCAACAAGTGAGCTATAAT+TGG 0.372058 5_4:+65297694 None:intergenic
TGATTTCGTGTCTGATAATT+GGG 0.372413 5_4:-65297339 Msa0864760:CDS
TTTGAAATTGCAGCAGCATA+TGG 0.384047 5_4:+65297611 None:intergenic
TAGCTAAATATGGCTCGAAA+TGG 0.385736 5_4:-65298320 Msa0864760:CDS
GTATGAGGCTGTTGAGTTAC+GGG 0.389583 5_4:-65303056 Msa0864760:CDS
TTGACAAGGCACAAGAGGTT+AGG 0.393288 5_4:-65298634 Msa0864760:CDS
TTTCGTGCTTCTGTTCCATC+TGG 0.400465 5_4:-65304449 Msa0864760:CDS
TTGAGCAAGTATTAAGAGTA+TGG 0.401851 5_4:+65298911 None:intergenic
CTATCATAGCATGATCAATC+TGG 0.408498 5_4:+65302927 None:intergenic
GATGATTCATTTCAGGTATG+AGG 0.417338 5_4:-65303071 Msa0864760:intron
AAGCACATCGCTGACCTGTC+TGG 0.418545 5_4:-65301818 Msa0864760:CDS
GGTATGAGGCTGTTGAGTTA+CGG 0.423365 5_4:-65303057 Msa0864760:CDS
CATCTCAAAACTCCAATGTT+TGG 0.426226 5_4:+65298407 None:intergenic
GAGAATTAGTCTATCAGAAA+TGG 0.430113 5_4:-65298130 Msa0864760:CDS
GTCTTTCTAAATTGCTTGGT+TGG 0.431013 5_4:-65297766 Msa0864760:CDS
ATAAGAGCAAGAAATATTGC+TGG 0.440753 5_4:+65297637 None:intergenic
AAAACATGCTGGAAATAATC+TGG 0.443130 5_4:-65301744 Msa0864760:CDS
TGTGTCCATTGCTGCATGTA+AGG 0.445103 5_4:-65301979 Msa0864760:CDS
TCTTCGAATTTGGATGGCAT+TGG 0.445316 5_4:+65297502 None:intergenic
CCCATCTTCTTCAGCCCAGA+AGG 0.445430 5_4:+65298060 None:intergenic
AATCACCTTTAAATGATGAT+AGG 0.445742 5_4:+65299793 None:intergenic
GATATTACGATGAAGAGAAC+GGG 0.448791 5_4:+65304673 None:intergenic
GAAATCATGATTCTTCCAAT+TGG 0.450349 5_4:-65299857 Msa0864760:CDS
TAACGTCTTTCTAAATTGCT+TGG 0.451411 5_4:-65297770 Msa0864760:CDS
ACCTTCTGGGCTGAAGAAGA+TGG 0.453795 5_4:-65298061 Msa0864760:CDS
TAAGGCTGGGGCTGCTGAAA+AGG 0.454878 5_4:-65301961 Msa0864760:CDS
CCATTGCTGCATGTAAGGCT+GGG 0.459396 5_4:-65301974 Msa0864760:CDS
CATGAAGAATATATAGCTGC+TGG 0.466302 5_4:-65298180 Msa0864760:CDS
AGGATAAGAATAATTGTAAA+CGG 0.466893 5_4:+65298098 None:intergenic
GCCATATTTAGCTACACAAT+AGG 0.467616 5_4:+65298329 None:intergenic
ACCAAACAAAGACAAGATAT+CGG 0.468171 5_4:+65297293 None:intergenic
GGGGACAAAGGTGTATATCT+AGG 0.471083 5_4:-65303031 Msa0864760:CDS
AGCTAAATATGGCTCGAAAT+GGG 0.471891 5_4:-65298319 Msa0864760:CDS
CCTTCTGGGCTGAAGAAGAT+GGG 0.476074 5_4:-65298060 Msa0864760:CDS
GACGGCGTCTTCGAGTTTAC+GGG 0.479590 5_4:+65304726 None:intergenic
ACATTGTAGCTGTTGAATCC+TGG 0.480980 5_4:+65297368 None:intergenic
AGTGTTTGTGCATTCTTCAC+AGG 0.481116 5_4:+65298598 None:intergenic
AAAATATCTGAGGCGCTGAT+TGG 0.482231 5_4:-65302971 Msa0864760:CDS
AATCCACAGACAATGGGATC+TGG 0.483010 5_4:-65298433 Msa0864760:intron
TGGAAATAATCTGGCAATTG+AGG 0.486178 5_4:-65301735 Msa0864760:intron
CCATGGATGTCTTACAGAAT+GGG 0.489043 5_4:-65298546 Msa0864760:CDS
AAAGCAGGAACAGGAAGCAC+TGG 0.490991 5_4:+65301785 None:intergenic
TATACATCATGCCTAGGGTT+TGG 0.493217 5_4:-65298885 Msa0864760:CDS
CTTAATTCGTATAACTGAGC+TGG 0.493792 5_4:+65297931 None:intergenic
GGCTGTTGAGTTACGGGATG+GGG 0.493888 5_4:-65303050 Msa0864760:CDS
TTAATAGTCTTTCTCCAAAG+TGG 0.496144 5_4:-65298278 Msa0864760:CDS
ATAACAGTAAAAGCAGGAAC+AGG 0.498354 5_4:+65301776 None:intergenic
ACCATGGATGTCTTACAGAA+TGG 0.500182 5_4:-65298547 Msa0864760:CDS
TACAAATCAACTTCAACAGT+TGG 0.502701 5_4:+65304488 None:intergenic
AGTGGAATGAGCAATACTCT+TGG 0.503212 5_4:-65298260 Msa0864760:CDS
CGACCATGAGGTTTCATCGC+TGG 0.505576 5_4:+65298360 None:intergenic
ATGGGGATATTGAATGCTAC+AGG 0.508985 5_4:-65298387 Msa0864760:CDS
ATCTGAGGCGCTGATTGGTA+TGG 0.509293 5_4:-65302966 Msa0864760:CDS
CTGCTGGAGCAAACGATACA+AGG 0.509781 5_4:-65298164 Msa0864760:CDS
AACTGTAATGTCGGTGAAGA+TGG 0.515053 5_4:-65299528 Msa0864760:intron
TATACAAATTAGCTATAGAA+GGG 0.516654 5_4:+65298007 None:intergenic
ATTTGATGAAGCACTGCGAA+TGG 0.517360 5_4:-65299825 Msa0864760:CDS
GATGTGAATCCACAGACAAT+GGG 0.518505 5_4:-65298439 Msa0864760:intron
TTGCTGGCAACAACGATTGA+GGG 0.519256 5_4:+65297653 None:intergenic
TGACAAGGCACAAGAGGTTA+GGG 0.524242 5_4:-65298633 Msa0864760:CDS
TGGTTACAATACGACGCTCC+GGG 0.524596 5_4:+65298566 None:intergenic
CAAGGGTATACATCATGCCT+AGG 0.525341 5_4:-65298891 Msa0864760:CDS
ATGGTTACAATACGACGCTC+CGG 0.526589 5_4:+65298565 None:intergenic
GTTCCATCTGGAAACTCCAC+TGG 0.529470 5_4:-65304437 Msa0864760:CDS
ATACTCTTAATACTTGCTCA+AGG 0.530745 5_4:-65298909 Msa0864760:CDS
TTTGATGAAGCACTGCGAAT+GGG 0.531009 5_4:-65299824 Msa0864760:CDS
CGTGAAAGCCTTTCTCAGAA+TGG 0.532502 5_4:+65304935 None:intergenic
ATTGCTGGCAACAACGATTG+AGG 0.533107 5_4:+65297652 None:intergenic
GAGACAAATGCAAATCTACA+TGG 0.533263 5_4:+65297569 None:intergenic
GATCGATTAAGAGTTTCTGC+TGG 0.537846 5_4:-65297457 Msa0864760:CDS
ATGACATCTTCGAATTTGGA+TGG 0.538913 5_4:+65297496 None:intergenic
AGGTAGGACCATTCTGAGAA+AGG 0.539368 5_4:-65304943 Msa0864760:five_prime_UTR
GAGTATTGCTCATTCCACTT+TGG 0.539677 5_4:+65298264 None:intergenic
AATATGGCTCGAAATGGGTT+CGG 0.540629 5_4:-65298314 Msa0864760:CDS
GTGTCTGATAATTGGGATTG+CGG 0.545267 5_4:-65297332 Msa0864760:CDS
TCACCGACATTACAGTTATG+TGG 0.549326 5_4:+65299534 None:intergenic
CATTGCTGCATGTAAGGCTG+GGG 0.550029 5_4:-65301973 Msa0864760:CDS
TATCATAGCATGATCAATCT+GGG 0.550616 5_4:+65302928 None:intergenic
TCAACAACCTCATTTCTCAA+TGG 0.554179 5_4:+65297859 None:intergenic
GGAGCAAACGATACAAGGAT+AGG 0.557844 5_4:-65298159 Msa0864760:CDS
AGCGGATTGTCGAAATGTTG+TGG 0.559835 5_4:+65297958 None:intergenic
AAAGGTGTATATCTAGGAAA+CGG 0.559992 5_4:-65303025 Msa0864760:CDS
TCAATCTGGGACTGCAGTGT+TGG 0.560963 5_4:+65302941 None:intergenic
GGGTGAGTTTGCCGCTACAA+TGG 0.561559 5_4:-65297416 Msa0864760:CDS
AAAATGTCAGAGCTTTCAGA+TGG 0.567059 5_4:+65298808 None:intergenic
AGGCTGTTGAGTTACGGGAT+GGG 0.576344 5_4:-65303051 Msa0864760:CDS
AGATATTACGATGAAGAGAA+CGG 0.576440 5_4:+65304672 None:intergenic
GAGCAAACGATACAAGGATA+GGG 0.582060 5_4:-65298158 Msa0864760:CDS
GGAAAAGGTGAACGAAACAT+TGG 0.582470 5_4:+65297250 None:intergenic
GAAGGTTGAAGTTGAACAAG+AGG 0.584388 5_4:+65298078 None:intergenic
GATGAAGAGAACGGGGTCGG+AGG 0.585100 5_4:+65304681 None:intergenic
ATAAGCGGTGGAAAACATGC+TGG 0.585973 5_4:-65301755 Msa0864760:CDS
ATGCCAGTGGAGTTTCCAGA+TGG 0.588263 5_4:+65304434 None:intergenic
TTTATCAAGATATTCTTGAA+CGG 0.588908 5_4:+65304759 None:intergenic
GAACATTGACAAGGCACAAG+AGG 0.589889 5_4:-65298639 Msa0864760:CDS
CCCATTCTGTAAGACATCCA+TGG 0.592109 5_4:+65298546 None:intergenic
GAGGCTGTTGAGTTACGGGA+TGG 0.592923 5_4:-65303052 Msa0864760:CDS
CTTCTGGGCTGAAGAAGATG+GGG 0.597724 5_4:-65298059 Msa0864760:CDS
TACGATGAAGAGAACGGGGT+CGG 0.599870 5_4:+65304678 None:intergenic
TACTCTTAATACTTGCTCAA+GGG 0.604722 5_4:-65298908 Msa0864760:CDS
CCCAGCCTTACATGCAGCAA+TGG 0.606579 5_4:+65301974 None:intergenic
TCAGCGATGTGCTTGTAGAG+TGG 0.606837 5_4:+65301827 None:intergenic
TTTAGCTACACAATAGGCAT+CGG 0.614152 5_4:+65298335 None:intergenic
AAGCAGGAACAGGAAGCACT+GGG 0.619719 5_4:+65301786 None:intergenic
GGGATCTGGAGACCAAACAT+TGG 0.619848 5_4:-65298419 Msa0864760:CDS
GAGTTACGGGATGGGGACAA+AGG 0.621649 5_4:-65303043 Msa0864760:CDS
CTTCCAGCGATGAAACCTCA+TGG 0.622033 5_4:-65298363 Msa0864760:CDS
GAATACGACGACGTTTAACA+AGG 0.623272 5_4:-65304963 None:intergenic
CCGCTTATAACAGTAAAAGC+AGG 0.623476 5_4:+65301770 None:intergenic
AGTCTAAGACACCAAACCCT+AGG 0.623518 5_4:+65298874 None:intergenic
ACAAACACTATTACAAGACC+CGG 0.625166 5_4:-65298584 Msa0864760:CDS
AGGCAAATTCTTGATAGTAG+AGG 0.625871 5_4:-65304515 Msa0864760:CDS
TGAACCGCCATTGAGAAATG+AGG 0.626400 5_4:-65297866 Msa0864760:CDS
AAGGGTATACATCATGCCTA+GGG 0.630150 5_4:-65298890 Msa0864760:CDS
CTGCAGTTTCTCCATTGTAG+CGG 0.630937 5_4:+65297405 None:intergenic
ACAACCTCATTTCTCAATGG+CGG 0.631163 5_4:+65297862 None:intergenic
TGGAAGAGTTGTAACACAGA+TGG 0.631751 5_4:-65297437 Msa0864760:CDS
CACGCGCTCGGAGATGAGAG+TGG 0.636109 5_4:+65304821 None:intergenic
GGAGCGTCGTATTGTAACCA+TGG 0.638962 5_4:-65298563 Msa0864760:CDS
GGAAGAGTTGTAACACAGAT+GGG 0.640126 5_4:-65297436 Msa0864760:CDS
ATTAACATCTTACATGCCAG+TGG 0.640506 5_4:+65304421 None:intergenic
AACAAACTATCGAGCTTGTG+CGG 0.640576 5_4:-65297906 Msa0864760:CDS
TATAAATGAGAAAATATCTG+AGG 0.641810 5_4:-65302981 Msa0864760:CDS
TAGGCATCGGTGCGACCATG+AGG 0.643922 5_4:+65298348 None:intergenic
TGATGAAATGAATGAGGTCA+AGG 0.644784 5_4:+65304844 None:intergenic
AGACAAATGCAAATCTACAT+GGG 0.645035 5_4:+65297570 None:intergenic
AAATGTCAGAGCTTTCAGAT+GGG 0.650957 5_4:+65298809 None:intergenic
AAACGATACAAGGATAGGGA+AGG 0.655773 5_4:-65298154 Msa0864760:CDS
TATAACTGAGCTGGAGACAG+CGG 0.659067 5_4:+65297940 None:intergenic
ACAAAGACAAGATATCGGAA+AGG 0.665479 5_4:+65297298 None:intergenic
GAGTGGTGATGAAATGAATG+AGG 0.671810 5_4:+65304838 None:intergenic
ACGACGACGTTTAACAAGGT+AGG 0.672274 5_4:-65304959 Msa0864760:five_prime_UTR
TGATTACGAAAGTAAAAGCG+AGG 0.674184 5_4:-65304535 Msa0864760:CDS
TGGAGAAAGACTATTAACAA+CGG 0.677970 5_4:+65298284 None:intergenic
TAGATTCACGTGAAATCGTG+TGG 0.685130 5_4:-65297828 Msa0864760:CDS
TTCTGGGCTGAAGAAGATGG+GGG 0.690562 5_4:-65298058 Msa0864760:CDS
GGGCCACATAACTGTAATGT+CGG 0.693032 5_4:-65299537 Msa0864760:CDS
TGGAGCAAGGAACATTGACA+AGG 0.710727 5_4:-65298648 Msa0864760:intron
ATATTACGATGAAGAGAACG+GGG 0.743082 5_4:+65304674 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTATCAGTTTTTTAATATA+AGG + chr5_4:65300697-65300716 None:intergenic 10.0%
!!! TCATATATATTTTTTAAAAG+AGG - chr5_4:65300740-65300759 Msa0864760:intron 10.0%
!!! GTTTTATCAAAAAAATTATA+TGG - chr5_4:65300910-65300929 Msa0864760:intron 10.0%
!! TACGAAAAAAAATAAATTAA+CGG + chr5_4:65301543-65301562 None:intergenic 10.0%
!!! TTTTAAATGAATATATGAAA+TGG - chr5_4:65302729-65302748 Msa0864760:intron 10.0%
!! AGAAAATTACTAATAAAAGA+GGG - chr5_4:65298363-65298382 Msa0864760:CDS 15.0%
!!! TTGTTCTTTGAAAATTAATT+TGG - chr5_4:65298572-65298591 Msa0864760:CDS 15.0%
!! TTATTGATCAATTATAGAAT+TGG - chr5_4:65299040-65299059 Msa0864760:intron 15.0%
!! GATAAATGTTATAGTAAAAT+TGG + chr5_4:65299647-65299666 None:intergenic 15.0%
!! ACATTTATCAATAATAAAGT+TGG - chr5_4:65299658-65299677 Msa0864760:intron 15.0%
!! CATTTATCAATAATAAAGTT+GGG - chr5_4:65299659-65299678 Msa0864760:intron 15.0%
!!! TTTTCATTTAAAGTTTAATC+TGG - chr5_4:65300246-65300265 Msa0864760:intron 15.0%
!! TCTAAAAACAAAAAATTATC+AGG - chr5_4:65300304-65300323 Msa0864760:intron 15.0%
!!! ATTTTTAAATTATTTTCACG+TGG - chr5_4:65300858-65300877 Msa0864760:intron 15.0%
!! AAACTAATTATAAAACAACT+CGG - chr5_4:65301341-65301360 Msa0864760:intron 15.0%
!!! AATTATAAAAAACTGTTTTG+AGG - chr5_4:65301875-65301894 Msa0864760:intron 15.0%
!! AAAACAAAAACTGAAAAAAT+AGG + chr5_4:65302416-65302435 None:intergenic 15.0%
!!! ATCAAATATTGTTTTTAATG+TGG - chr5_4:65303488-65303507 Msa0864760:intron 15.0%
!! TTTATCAAGATATTCTTGAA+CGG + chr5_4:65297400-65297419 None:intergenic 20.0%
!!! TGATTTGTGAAATTAATCTT+AGG - chr5_4:65297902-65297921 Msa0864760:CDS 20.0%
!!! AAATTGATTTTAGTTAGAAG+TGG - chr5_4:65298022-65298041 Msa0864760:CDS 20.0%
!!! AATTGATTTTAGTTAGAAGT+GGG - chr5_4:65298023-65298042 Msa0864760:CDS 20.0%
!! ACTAATATAATAGACACTTA+TGG + chr5_4:65298268-65298287 None:intergenic 20.0%
!!! GTCTATTATATTAGTCATTT+TGG - chr5_4:65298273-65298292 Msa0864760:CDS 20.0%
!! CAGAAAATTACTAATAAAAG+AGG - chr5_4:65298362-65298381 Msa0864760:CDS 20.0%
!! TATAAATGAGAAAATATCTG+AGG - chr5_4:65299175-65299194 Msa0864760:intron 20.0%
!!! CAAATAACCAAATTTTTTGT+GGG + chr5_4:65300985-65301004 None:intergenic 20.0%
!! AACTAATTATAAAACAACTC+GGG - chr5_4:65301342-65301361 Msa0864760:intron 20.0%
!!! ATATATACTGTTTTTACTGT+TGG - chr5_4:65301462-65301481 Msa0864760:intron 20.0%
!! AGGTTATTTGGAAAAAAAAT+TGG + chr5_4:65301748-65301767 None:intergenic 20.0%
!! AAGATAATAATGAGGTTATT+TGG + chr5_4:65301760-65301779 None:intergenic 20.0%
!! AACATAATCAATTTCAACAA+CGG + chr5_4:65302159-65302178 None:intergenic 20.0%
!!! ATAAATCTGTTTTAGAAGAA+AGG - chr5_4:65302754-65302773 Msa0864760:intron 20.0%
!! NTTAAGAAGCAAAATACAAA+CGG + chr5_4:65302958-65302977 None:intergenic 20.0%
!! AAAAACAATATTTGATCAAG+TGG + chr5_4:65303484-65303503 None:intergenic 20.0%
!! AGGATAAGAATAATTGTAAA+CGG + chr5_4:65304061-65304080 None:intergenic 20.0%
!! TATACAAATTAGCTATAGAA+GGG + chr5_4:65304152-65304171 None:intergenic 20.0%
!! TTATACAAATTAGCTATAGA+AGG + chr5_4:65304153-65304172 None:intergenic 20.0%
!!! TTTGGTTTCTTTATTTTCTA+AGG - chr5_4:65304880-65304899 Msa0864760:five_prime_UTR 20.0%
!!! TCTAATCCATTTTCATAAAA+TGG + chr5_4:65304933-65304952 None:intergenic 20.0%
!!! TTTTATGAAAATGGATTAGA+AGG - chr5_4:65304933-65304952 Msa0864760:five_prime_UTR 20.0%
!! TATGAAAAAAGGAGTACAAT+CGG - chr5_4:65297598-65297617 Msa0864760:CDS 25.0%
!! ATGTTGATTATGTGCATATT+TGG - chr5_4:65297861-65297880 Msa0864760:CDS 25.0%
! TTTGTGAAATTAATCTTAGG+CGG - chr5_4:65297905-65297924 Msa0864760:CDS 25.0%
!!! ATATTAGTCATTTTGGTCAT+TGG - chr5_4:65298280-65298299 Msa0864760:CDS 25.0%
!! TTTTCGAATGTATTTTTCGT+TGG - chr5_4:65298328-65298347 Msa0864760:CDS 25.0%
! TTTGCGATTTCAATACATTT+AGG - chr5_4:65298398-65298417 Msa0864760:CDS 25.0%
! TTGCGATTTCAATACATTTA+GGG - chr5_4:65298399-65298418 Msa0864760:CDS 25.0%
!!! ACAATTATTTTTGTCCATGA+AGG + chr5_4:65298440-65298459 None:intergenic 25.0%
! TGACATAATGATACACAATA+TGG + chr5_4:65299330-65299349 None:intergenic 25.0%
!!! ATGTCACATTTTAAGACAAT+TGG - chr5_4:65299361-65299380 Msa0864760:intron 25.0%
! ATAAGTAAGTAACTCAGTTA+GGG - chr5_4:65299702-65299721 Msa0864760:intron 25.0%
! TATTCTCTTCTTTCATAACA+AGG - chr5_4:65299757-65299776 Msa0864760:intron 25.0%
! AGGTTAGTATGAGAATATTA+TGG - chr5_4:65299789-65299808 Msa0864760:intron 25.0%
! GTTCAAAACGGATATTATAA+AGG - chr5_4:65299830-65299849 Msa0864760:CDS 25.0%
! TATCTGTTCATAACATATGT+AGG + chr5_4:65300015-65300034 None:intergenic 25.0%
! ATTATTTCCTATAGACACTT+AGG - chr5_4:65300504-65300523 Msa0864760:intron 25.0%
! TTATTTCCTATAGACACTTA+GGG - chr5_4:65300505-65300524 Msa0864760:intron 25.0%
!!! ACTAGTCTTTTGTTGTTATT+CGG - chr5_4:65300958-65300977 Msa0864760:intron 25.0%
!!! CCAAATAACCAAATTTTTTG+TGG + chr5_4:65300986-65301005 None:intergenic 25.0%
! CCACAAAAAATTTGGTTATT+TGG - chr5_4:65300983-65301002 Msa0864760:intron 25.0%
! TAAATATTTCCGCATTCAAT+GGG + chr5_4:65301313-65301332 None:intergenic 25.0%
! ATAAATATTTCCGCATTCAA+TGG + chr5_4:65301314-65301333 None:intergenic 25.0%
! ACTAATTATAAAACAACTCG+GGG - chr5_4:65301343-65301362 Msa0864760:intron 25.0%
!!! AGTTCTTTGTTGTTTAACAT+TGG - chr5_4:65301399-65301418 Msa0864760:intron 25.0%
! GTTGTAATACTTGAAGATAT+AGG - chr5_4:65301826-65301845 Msa0864760:CDS 25.0%
! GCTTTCTTCATTATTGTTAT+AGG - chr5_4:65302277-65302296 Msa0864760:intron 25.0%
! AATCACCTTTAAATGATGAT+AGG + chr5_4:65302366-65302385 None:intergenic 25.0%
! AACTGAAAAAATAGGATAGT+GGG + chr5_4:65302408-65302427 None:intergenic 25.0%
! AAACTGAAAAAATAGGATAG+TGG + chr5_4:65302409-65302428 None:intergenic 25.0%
!!! TATTTGTTGTTCATGACAAA+AGG - chr5_4:65302571-65302590 Msa0864760:intron 25.0%
!!! ATTTGTTGTTCATGACAAAA+GGG - chr5_4:65302572-65302591 Msa0864760:intron 25.0%
! CTGTTATTACAGAAAAATGT+GGG - chr5_4:65302599-65302618 Msa0864760:intron 25.0%
! AGAAAAAATATCTCCAAAAC+TGG - chr5_4:65302779-65302798 Msa0864760:intron 25.0%
!! AATACTGTATAAACCAGTTT+TGG + chr5_4:65302795-65302814 None:intergenic 25.0%
! ATTAGAGTCAACAATTAAGT+TGG - chr5_4:65302828-65302847 Msa0864760:intron 25.0%
! TGTTGGAAATATAAGATCTA+TGG - chr5_4:65302894-65302913 Msa0864760:intron 25.0%
! TTAAGAAGCAAAATACAAAC+GGG + chr5_4:65302957-65302976 None:intergenic 25.0%
! CAATTAGATAATGTGCTAAT+TGG - chr5_4:65303216-65303235 Msa0864760:intron 25.0%
!!! ACTTGATTTTATTCAAGTTG+AGG - chr5_4:65303302-65303321 Msa0864760:intron 25.0%
!!! CTTGATTTTATTCAAGTTGA+GGG - chr5_4:65303303-65303322 Msa0864760:intron 25.0%
!!! ATCTCTTTTTCATTCCATAT+TGG + chr5_4:65303441-65303460 None:intergenic 25.0%
! GAAATAACGAAAAATGTAGA+TGG + chr5_4:65303934-65303953 None:intergenic 25.0%
!! TTTTCATAAAATGGAGGAAA+AGG + chr5_4:65304924-65304943 None:intergenic 25.0%
!! TTTCCTCCATTTTATGAAAA+TGG - chr5_4:65304924-65304943 Msa0864760:five_prime_UTR 25.0%
!! AATCCATTTTCATAAAATGG+AGG + chr5_4:65304930-65304949 None:intergenic 25.0%
AGATATTACGATGAAGAGAA+CGG + chr5_4:65297487-65297506 None:intergenic 30.0%
CAGTCGAATCATATGAAAAA+AGG - chr5_4:65297587-65297606 Msa0864760:CDS 30.0%
TACAAATCAACTTCAACAGT+TGG + chr5_4:65297671-65297690 None:intergenic 30.0%
TTGTGAAATTAATCTTAGGC+GGG - chr5_4:65297906-65297925 Msa0864760:CDS 30.0%
! TTTTGATACTTTAATGTGCG+AGG - chr5_4:65297935-65297954 Msa0864760:CDS 30.0%
! AGTGTAAAATGGTTTAGGTT+TGG - chr5_4:65298048-65298067 Msa0864760:CDS 30.0%
AACTTGAAGCTAGAATTTGT+AGG + chr5_4:65298139-65298158 None:intergenic 30.0%
! ATGGATGTGTTTTCAATGTT+AGG + chr5_4:65298249-65298268 None:intergenic 30.0%
!! TGGTCATTGGATCTATTTTT+AGG - chr5_4:65298293-65298312 Msa0864760:CDS 30.0%
ATTACTAATAAAAGAGGGAC+TGG - chr5_4:65298368-65298387 Msa0864760:CDS 30.0%
TTACTAATAAAAGAGGGACT+GGG - chr5_4:65298369-65298388 Msa0864760:CDS 30.0%
GTCTGCTTAATTGTGTATAT+TGG - chr5_4:65298458-65298477 Msa0864760:intron 30.0%
!! TGCAAAGTTTTGTCAAATAG+AGG - chr5_4:65298595-65298614 Msa0864760:CDS 30.0%
ATAAGAGAATCACCTAAACA+GGG + chr5_4:65298961-65298980 None:intergenic 30.0%
AATAAGAGAATCACCTAAAC+AGG + chr5_4:65298962-65298981 None:intergenic 30.0%
TGTTTAGGTGATTCTCTTAT+TGG - chr5_4:65298961-65298980 Msa0864760:CDS 30.0%
GTTTAGGTGATTCTCTTATT+GGG - chr5_4:65298962-65298981 Msa0864760:CDS 30.0%
! TTGGATTAACATTGACTGTT+CGG - chr5_4:65299059-65299078 Msa0864760:intron 30.0%
! AAAGGTGTATATCTAGGAAA+CGG - chr5_4:65299131-65299150 Msa0864760:intron 30.0%
TATCATAGCATGATCAATCT+GGG + chr5_4:65299231-65299250 None:intergenic 30.0%
TATTTCAACATCTTTCTGCT+GGG - chr5_4:65299276-65299295 Msa0864760:intron 30.0%
AGCATTCTTTAGTATAGTGA+TGG - chr5_4:65299478-65299497 Msa0864760:intron 30.0%
GCATTCTTTAGTATAGTGAT+GGG - chr5_4:65299479-65299498 Msa0864760:intron 30.0%
CATAAGTAAGTAACTCAGTT+AGG - chr5_4:65299701-65299720 Msa0864760:intron 30.0%
!! GAAAAGTGTTGTGTTCAAAA+CGG - chr5_4:65299818-65299837 Msa0864760:CDS 30.0%
! CAAGCAATCACTTGATATTT+TGG + chr5_4:65299933-65299952 None:intergenic 30.0%
!! TGTTTCTGATTTTTGTTTGC+AGG - chr5_4:65300126-65300145 Msa0864760:intron 30.0%
!! GTTTCTGATTTTTGTTTGCA+GGG - chr5_4:65300127-65300146 Msa0864760:intron 30.0%
!! TTTCTGATTTTTGTTTGCAG+GGG - chr5_4:65300128-65300147 Msa0864760:intron 30.0%
AAAACATGCTGGAAATAATC+TGG - chr5_4:65300412-65300431 Msa0864760:intron 30.0%
AAGAGAAAAAGAGAGAATAG+AGG - chr5_4:65300634-65300653 Msa0864760:intron 30.0%
AGCTATGTTACTGTAAAGTA+AGG - chr5_4:65301030-65301049 Msa0864760:intron 30.0%
ATGTTACTGTAAAGTAAGGA+AGG - chr5_4:65301034-65301053 Msa0864760:intron 30.0%
TGTTACTGTAAAGTAAGGAA+GGG - chr5_4:65301035-65301054 Msa0864760:intron 30.0%
!!! TGAGATGCTGTTGTTATTTT+GGG + chr5_4:65301076-65301095 None:intergenic 30.0%
TCAATATTCTTTCTCTCCAA+AGG + chr5_4:65301111-65301130 None:intergenic 30.0%
GCGATAGATTAAAAAACAGT+GGG + chr5_4:65301141-65301160 None:intergenic 30.0%
AAATTGCTCATAACTCCAAA+GGG + chr5_4:65301263-65301282 None:intergenic 30.0%
AAAATTGCTCATAACTCCAA+AGG + chr5_4:65301264-65301283 None:intergenic 30.0%
! TGTTGTTTAACATTGGAAGT+TGG - chr5_4:65301406-65301425 Msa0864760:intron 30.0%
AGGTGGAAAAGATAATAATG+AGG + chr5_4:65301768-65301787 None:intergenic 30.0%
CAAAATCCAATGCAAATTCA+AGG + chr5_4:65301807-65301826 None:intergenic 30.0%
ATGAAATTGTTGAGTTAGTG+TGG + chr5_4:65301911-65301930 None:intergenic 30.0%
AACAATTTCATGCTAGACAT+GGG - chr5_4:65301920-65301939 Msa0864760:intron 30.0%
!!! TCTCCCTTTTTGGTTTTTAT+CGG + chr5_4:65302010-65302029 None:intergenic 30.0%
ATAAAAACCAAAAAGGGAGA+TGG - chr5_4:65302010-65302029 Msa0864760:CDS 30.0%
TACTGTTATCCTACAAAAAC+TGG + chr5_4:65302095-65302114 None:intergenic 30.0%
GGATAACAGTAAAAACAGTA+TGG - chr5_4:65302104-65302123 Msa0864760:intron 30.0%
AACAGTAAAAACAGTATGGA+TGG - chr5_4:65302108-65302127 Msa0864760:intron 30.0%
GAAATCATGATTCTTCCAAT+TGG - chr5_4:65302299-65302318 Msa0864760:intron 30.0%
TGAGACCTATCATCATTTAA+AGG - chr5_4:65302358-65302377 Msa0864760:intron 30.0%
ACTGAAAAAATAGGATAGTG+GGG + chr5_4:65302407-65302426 None:intergenic 30.0%
! ACTTGATAATATTCGAGCAT+GGG + chr5_4:65302477-65302496 None:intergenic 30.0%
! AACTTGATAATATTCGAGCA+TGG + chr5_4:65302478-65302497 None:intergenic 30.0%
CAGCTCTATTACAATGATTA+AGG - chr5_4:65302516-65302535 Msa0864760:intron 30.0%
AGCTTAAACAACATATCTCA+GGG + chr5_4:65302543-65302562 None:intergenic 30.0%
GCTGTTATTACAGAAAAATG+TGG - chr5_4:65302598-65302617 Msa0864760:intron 30.0%
! TTTAAGATAAAAAGCTTGCC+TGG + chr5_4:65302674-65302693 None:intergenic 30.0%
!! TCTTTTACTCTCTGATTTGT+TGG - chr5_4:65302877-65302896 Msa0864760:intron 30.0%
! TTATGATGTGTTTGTTGGAT+AGG - chr5_4:65303153-65303172 Msa0864760:intron 30.0%
TTGAGCAAGTATTAAGAGTA+TGG + chr5_4:65303248-65303267 None:intergenic 30.0%
ATACTCTTAATACTTGCTCA+AGG - chr5_4:65303247-65303266 Msa0864760:intron 30.0%
TACTCTTAATACTTGCTCAA+GGG - chr5_4:65303248-65303267 Msa0864760:intron 30.0%
!!! ATTTTCATCACTGCTACTTT+TGG - chr5_4:65303366-65303385 Msa0864760:intron 30.0%
!!! TTTTCATCACTGCTACTTTT+GGG - chr5_4:65303367-65303386 Msa0864760:intron 30.0%
! GCAATAATGGAAATCCAATA+TGG - chr5_4:65303424-65303443 Msa0864760:intron 30.0%
! AAAGAGATTTTTCTTTGCTG+TGG - chr5_4:65303453-65303472 Msa0864760:intron 30.0%
!!! ATTGTTTTTAATGTGGAGCA+AGG - chr5_4:65303495-65303514 Msa0864760:intron 30.0%
!!! AAACATTGGAGTTTTGAGAT+GGG - chr5_4:65303751-65303770 Msa0864760:intron 30.0%
TGGAGAAAGACTATTAACAA+CGG + chr5_4:65303875-65303894 None:intergenic 30.0%
TTAATAGTCTTTCTCCAAAG+TGG - chr5_4:65303878-65303897 Msa0864760:intron 30.0%
! GAGAATTAGTCTATCAGAAA+TGG - chr5_4:65304026-65304045 Msa0864760:intron 30.0%
! AAATGTTGTGGAAAAAGCAT+TGG + chr5_4:65304189-65304208 None:intergenic 30.0%
TAACGTCTTTCTAAATTGCT+TGG - chr5_4:65304386-65304405 Msa0864760:intron 30.0%
ATAAGAGCAAGAAATATTGC+TGG + chr5_4:65304522-65304541 None:intergenic 30.0%
AGACAAATGCAAATCTACAT+GGG + chr5_4:65304589-65304608 None:intergenic 30.0%
TACAGCAAGTATAGATGAAT+TGG - chr5_4:65304617-65304636 Msa0864760:intron 30.0%
CAAAATGACATCTTCGAATT+TGG + chr5_4:65304667-65304686 None:intergenic 30.0%
ATGATTTCGTGTCTGATAAT+TGG - chr5_4:65304816-65304835 Msa0864760:five_prime_UTR 30.0%
TGATTTCGTGTCTGATAATT+GGG - chr5_4:65304817-65304836 Msa0864760:five_prime_UTR 30.0%
ACCAAACAAAGACAAGATAT+CGG + chr5_4:65304866-65304885 None:intergenic 30.0%
TGATGAAATGAATGAGGTCA+AGG + chr5_4:65297315-65297334 None:intergenic 35.0%
! CATTTCTACGATCGATTCTT+CGG + chr5_4:65297376-65297395 None:intergenic 35.0%
ATATTACGATGAAGAGAACG+GGG + chr5_4:65297485-65297504 None:intergenic 35.0%
GATATTACGATGAAGAGAAC+GGG + chr5_4:65297486-65297505 None:intergenic 35.0%
TGATTACGAAAGTAAAAGCG+AGG - chr5_4:65297621-65297640 Msa0864760:CDS 35.0%
! AGGCAAATTCTTGATAGTAG+AGG - chr5_4:65297641-65297660 Msa0864760:CDS 35.0%
ATTAACATCTTACATGCCAG+TGG + chr5_4:65297738-65297757 None:intergenic 35.0%
CCTCACACATTCAATTACTA+CGG + chr5_4:65297822-65297841 None:intergenic 35.0%
TCAATGTTAGGTTTCACATC+TGG + chr5_4:65298237-65298256 None:intergenic 35.0%
TACTAATAAAAGAGGGACTG+GGG - chr5_4:65298370-65298389 Msa0864760:CDS 35.0%
ACATCAGTCTTCTTAAATCG+TGG - chr5_4:65298515-65298534 Msa0864760:intron 35.0%
CATTCTGATGCAATTTCACT+TGG - chr5_4:65298739-65298758 Msa0864760:intron 35.0%
TAGATATAGCTAGCCAAACA+AGG + chr5_4:65298863-65298882 None:intergenic 35.0%
! TGTTTGGCTAGCTATATCTA+AGG - chr5_4:65298863-65298882 Msa0864760:CDS 35.0%
! TGGATTAACATTGACTGTTC+GGG - chr5_4:65299060-65299079 Msa0864760:intron 35.0%
! GATGATTCATTTCAGGTATG+AGG - chr5_4:65299085-65299104 Msa0864760:intron 35.0%
CTATCATAGCATGATCAATC+TGG + chr5_4:65299232-65299251 None:intergenic 35.0%
! CCTTTTTCTCTGTTTTGTCA+AGG + chr5_4:65299256-65299275 None:intergenic 35.0%
CCTTGACAAAACAGAGAAAA+AGG - chr5_4:65299253-65299272 Msa0864760:intron 35.0%
GTATTTCAACATCTTTCTGC+TGG - chr5_4:65299275-65299294 Msa0864760:intron 35.0%
!!! TCAAGCTTTTTTTCCCTACT+CGG + chr5_4:65299390-65299409 None:intergenic 35.0%
TTTCATTTCCTTTCCTGCAA+CGG + chr5_4:65299539-65299558 None:intergenic 35.0%
!!! AGCACACTTTTGTTTTGTAG+TGG - chr5_4:65299601-65299620 Msa0864760:intron 35.0%
!!! GCACACTTTTGTTTTGTAGT+GGG - chr5_4:65299602-65299621 Msa0864760:intron 35.0%
AATAAAGTTGGGACAGTGTT+TGG - chr5_4:65299670-65299689 Msa0864760:intron 35.0%
TCATAACAAGGTGCATACTT+AGG - chr5_4:65299769-65299788 Msa0864760:intron 35.0%
GTCTTTCTTCCGTTTATATC+CGG - chr5_4:65299952-65299971 Msa0864760:intron 35.0%
TCAAACATGCAAGTCATTGT+AGG + chr5_4:65300038-65300057 None:intergenic 35.0%
!! TTCTGATTTTTGTTTGCAGG+GGG - chr5_4:65300129-65300148 Msa0864760:intron 35.0%
ATAACAGTAAAAGCAGGAAC+AGG + chr5_4:65300383-65300402 None:intergenic 35.0%
!! CCTGCTTTTACTGTTATAAG+CGG - chr5_4:65300386-65300405 Msa0864760:intron 35.0%
TGGAAATAATCTGGCAATTG+AGG - chr5_4:65300421-65300440 Msa0864760:intron 35.0%
ATTCGGTCCCACAAAAAATT+TGG - chr5_4:65300975-65300994 Msa0864760:intron 35.0%
!!! GTGAGATGCTGTTGTTATTT+TGG + chr5_4:65301077-65301096 None:intergenic 35.0%
GAGAGAAAGAATATTGACGT+GGG - chr5_4:65301114-65301133 Msa0864760:intron 35.0%
GGCGATAGATTAAAAAACAG+TGG + chr5_4:65301142-65301161 None:intergenic 35.0%
GAATTTGAAGAGAGAGAGAA+AGG + chr5_4:65301209-65301228 None:intergenic 35.0%
AATTGCTCATAACTCCAAAG+GGG + chr5_4:65301262-65301281 None:intergenic 35.0%
AGTTAAATGCCCATTGAATG+CGG - chr5_4:65301301-65301320 Msa0864760:intron 35.0%
ACAAAGAACTGACTAGATGT+TGG + chr5_4:65301389-65301408 None:intergenic 35.0%
TAACATTGGAAGTTGGATTG+TGG - chr5_4:65301413-65301432 Msa0864760:intron 35.0%
GCCTATCATAATATAACACC+TGG - chr5_4:65301484-65301503 Msa0864760:intron 35.0%
! GCCAGGTGTTATATTATGAT+AGG + chr5_4:65301488-65301507 None:intergenic 35.0%
CTTCTATAGCGATTGTTGAA+GGG + chr5_4:65301568-65301587 None:intergenic 35.0%
AAAGTGGAAGTTGCATTGAA+CGG + chr5_4:65301610-65301629 None:intergenic 35.0%
!!! TTCGCTTTTTCTTGAGAAAG+TGG + chr5_4:65301626-65301645 None:intergenic 35.0%
TTCTCTTCTTACTGCAACAA+TGG + chr5_4:65301673-65301692 None:intergenic 35.0%
CGATCATTAACCATTGAGTT+TGG + chr5_4:65301700-65301719 None:intergenic 35.0%
CAACAATTTCATGCTAGACA+TGG - chr5_4:65301919-65301938 Msa0864760:intron 35.0%
GTTGAATGCTCTATGAAAAG+AGG - chr5_4:65301983-65302002 Msa0864760:CDS 35.0%
AGGTCCGATAAAAACCAAAA+AGG - chr5_4:65302003-65302022 Msa0864760:CDS 35.0%
GGTCCGATAAAAACCAAAAA+GGG - chr5_4:65302004-65302023 Msa0864760:CDS 35.0%
! CTGAAAAAATAGGATAGTGG+GGG + chr5_4:65302406-65302425 None:intergenic 35.0%
CAGCTTAAACAACATATCTC+AGG + chr5_4:65302544-65302563 None:intergenic 35.0%
!! GAGTCAACAATTAAGTTGGT+TGG - chr5_4:65302832-65302851 Msa0864760:intron 35.0%
! ACCAAAATGGTTTGTACTAG+AGG - chr5_4:65303100-65303119 Msa0864760:intron 35.0%
! TCCTCTAGTACAAACCATTT+TGG + chr5_4:65303104-65303123 None:intergenic 35.0%
ATAAACGAAAGAGACGATGT+AGG - chr5_4:65303123-65303142 Msa0864760:intron 35.0%
TAAACGAAAGAGACGATGTA+GGG - chr5_4:65303124-65303143 Msa0864760:intron 35.0%
AGAGCTTATGATGTGTTTGT+TGG - chr5_4:65303148-65303167 Msa0864760:intron 35.0%
AAATGTCAGAGCTTTCAGAT+GGG + chr5_4:65303350-65303369 None:intergenic 35.0%
AAAATGTCAGAGCTTTCAGA+TGG + chr5_4:65303351-65303370 None:intergenic 35.0%
AAGTTGGCGAAAAGCAATAA+TGG - chr5_4:65303411-65303430 Msa0864760:intron 35.0%
ACAAACACTATTACAAGACC+CGG - chr5_4:65303572-65303591 Msa0864760:intron 35.0%
!!! CAGAATGGGAGATTTTTTGT+CGG - chr5_4:65303624-65303643 Msa0864760:intron 35.0%
!! ATATGTTTGATGACGATCCA+CGG - chr5_4:65303685-65303704 Msa0864760:intron 35.0%
CATCTCAAAACTCCAATGTT+TGG + chr5_4:65303752-65303771 None:intergenic 35.0%
!!! CAAACATTGGAGTTTTGAGA+TGG - chr5_4:65303750-65303769 Msa0864760:intron 35.0%
!!! AACATTGGAGTTTTGAGATG+GGG - chr5_4:65303752-65303771 Msa0864760:intron 35.0%
TTTAGCTACACAATAGGCAT+CGG + chr5_4:65303824-65303843 None:intergenic 35.0%
GCCTATTGTGTAGCTAAATA+TGG - chr5_4:65303826-65303845 Msa0864760:intron 35.0%
GCCATATTTAGCTACACAAT+AGG + chr5_4:65303830-65303849 None:intergenic 35.0%
TAGCTAAATATGGCTCGAAA+TGG - chr5_4:65303836-65303855 Msa0864760:intron 35.0%
AGCTAAATATGGCTCGAAAT+GGG - chr5_4:65303837-65303856 Msa0864760:intron 35.0%
CATGAAGAATATATAGCTGC+TGG - chr5_4:65303976-65303995 Msa0864760:intron 35.0%
TTGTTCAACTTCAACCTTCT+GGG - chr5_4:65304082-65304101 Msa0864760:intron 35.0%
CTTAATTCGTATAACTGAGC+TGG + chr5_4:65304228-65304247 None:intergenic 35.0%
CAGCTCAGTTATACGAATTA+AGG - chr5_4:65304226-65304245 Msa0864760:intron 35.0%
TCAACAACCTCATTTCTCAA+TGG + chr5_4:65304300-65304319 None:intergenic 35.0%
!! GATGTAAAGCTGATTTTGAG+AGG - chr5_4:65304361-65304380 Msa0864760:intron 35.0%
GTCTTTCTAAATTGCTTGGT+TGG - chr5_4:65304390-65304409 Msa0864760:intron 35.0%
AGCAACAAGTGAGCTATAAT+TGG + chr5_4:65304465-65304484 None:intergenic 35.0%
! TTTGAAATTGCAGCAGCATA+TGG + chr5_4:65304548-65304567 None:intergenic 35.0%
! TCTACATGGGATAGTGTTTT+TGG + chr5_4:65304576-65304595 None:intergenic 35.0%
GAGACAAATGCAAATCTACA+TGG + chr5_4:65304590-65304609 None:intergenic 35.0%
ATGACATCTTCGAATTTGGA+TGG + chr5_4:65304663-65304682 None:intergenic 35.0%
ACAAAGACAAGATATCGGAA+AGG + chr5_4:65304861-65304880 None:intergenic 35.0%
TCCGATATCTTGTCTTTGTT+TGG - chr5_4:65304862-65304881 Msa0864760:five_prime_UTR 35.0%
TAGAAGGATGCCTTCAAAAT+TGG - chr5_4:65304949-65304968 Msa0864760:five_prime_UTR 35.0%
! GAGTGGTGATGAAATGAATG+AGG + chr5_4:65297321-65297340 None:intergenic 40.0%
CCGTAGTAATTGAATGTGTG+AGG - chr5_4:65297819-65297838 Msa0864760:CDS 40.0%
!! GTGCATATTTGGTTCTGCTT+TGG - chr5_4:65297872-65297891 Msa0864760:CDS 40.0%
GTCGCTGAATGTGTTATGTT+TGG - chr5_4:65297971-65297990 Msa0864760:CDS 40.0%
AGAAGTGGGTGAGTGTAAAA+TGG - chr5_4:65298037-65298056 Msa0864760:CDS 40.0%
GGGTGAGTGTAAAATGGTTT+AGG - chr5_4:65298043-65298062 Msa0864760:CDS 40.0%
! CTGAAATTCAATTCTGGAGG+TGG + chr5_4:65298209-65298228 None:intergenic 40.0%
CAGCTGAAATTCAATTCTGG+AGG + chr5_4:65298212-65298231 None:intergenic 40.0%
GAGCAGCTGAAATTCAATTC+TGG + chr5_4:65298215-65298234 None:intergenic 40.0%
ATCGTGGCACTATAGCTTAA+TGG - chr5_4:65298531-65298550 Msa0864760:intron 40.0%
GCTATAACACTGTAGCATAG+CGG - chr5_4:65298628-65298647 Msa0864760:CDS 40.0%
AGCATTAGTGTTATCGACCT+CGG + chr5_4:65298683-65298702 None:intergenic 40.0%
!! TACAAAGCTCAAGCCTTGTT+TGG - chr5_4:65298847-65298866 Msa0864760:CDS 40.0%
TACACTCTATTAGAACTGCC+TGG - chr5_4:65298896-65298915 Msa0864760:CDS 40.0%
!! TCGGGTTGATGATTCATTTC+AGG - chr5_4:65299078-65299097 Msa0864760:intron 40.0%
!! AAAATATCTGAGGCGCTGAT+TGG - chr5_4:65299185-65299204 Msa0864760:intron 40.0%
AAGACAATTGGAAACCGAGT+AGG - chr5_4:65299373-65299392 Msa0864760:intron 40.0%
AGACAATTGGAAACCGAGTA+GGG - chr5_4:65299374-65299393 Msa0864760:intron 40.0%
AAAGCTTGATTCACCTAGTG+AGG - chr5_4:65299401-65299420 Msa0864760:intron 40.0%
TCACCTAGTGAGGTAAAACT+TGG - chr5_4:65299411-65299430 Msa0864760:intron 40.0%
! CAACCAAGTTTTACCTCACT+AGG + chr5_4:65299417-65299436 None:intergenic 40.0%
TTTCTCTCTTGCTCTTGTTC+AGG - chr5_4:65299444-65299463 Msa0864760:intron 40.0%
!! CAACATTTTGTTTCCGTTGC+AGG - chr5_4:65299523-65299542 Msa0864760:intron 40.0%
!! TTTTGTTTCCGTTGCAGGAA+AGG - chr5_4:65299528-65299547 Msa0864760:intron 40.0%
CATCAAGCTCCGGATATAAA+CGG + chr5_4:65299964-65299983 None:intergenic 40.0%
AGACTACTTTCATCAAGCTC+CGG + chr5_4:65299974-65299993 None:intergenic 40.0%
CCGCTTATAACAGTAAAAGC+AGG + chr5_4:65300389-65300408 None:intergenic 40.0%
! GCTTTTACTGTTATAAGCGG+TGG - chr5_4:65300389-65300408 Msa0864760:intron 40.0%
AACACACCCTAAGTGTCTAT+AGG + chr5_4:65300514-65300533 None:intergenic 40.0%
ATAGACACTTAGGGTGTGTT+TGG - chr5_4:65300514-65300533 Msa0864760:intron 40.0%
GGAGAGAAAGAATATTGACG+TGG - chr5_4:65301113-65301132 Msa0864760:intron 40.0%
TTGGAAGTTGGATTGTGGAA+AGG - chr5_4:65301418-65301437 Msa0864760:intron 40.0%
GCTTCTATAGCGATTGTTGA+AGG + chr5_4:65301569-65301588 None:intergenic 40.0%
AGAGAAGAGTCCAAACTCAA+TGG - chr5_4:65301687-65301706 Msa0864760:intron 40.0%
!! TCTTGGCCTTGAATTTGCAT+TGG - chr5_4:65301798-65301817 Msa0864760:CDS 40.0%
! AATCCTGTGCCAGTTTTTGT+AGG - chr5_4:65302083-65302102 Msa0864760:intron 40.0%
TATCCTACAAAAACTGGCAC+AGG + chr5_4:65302089-65302108 None:intergenic 40.0%
AAATCACTATGAAGCAGCAG+AGG + chr5_4:65302237-65302256 None:intergenic 40.0%
TCAAATCTGCTTGCTCCAAT+TGG + chr5_4:65302317-65302336 None:intergenic 40.0%
!! ATTTGATGAAGCACTGCGAA+TGG - chr5_4:65302331-65302350 Msa0864760:intron 40.0%
!! TTTGATGAAGCACTGCGAAT+GGG - chr5_4:65302332-65302351 Msa0864760:intron 40.0%
TCACCGACATTACAGTTATG+TGG + chr5_4:65302625-65302644 None:intergenic 40.0%
AACTGTAATGTCGGTGAAGA+TGG - chr5_4:65302628-65302647 Msa0864760:intron 40.0%
ATAGTGCACTAGCACCAAAA+TGG - chr5_4:65303087-65303106 Msa0864760:intron 40.0%
AAACGAAAGAGACGATGTAG+GGG - chr5_4:65303125-65303144 Msa0864760:intron 40.0%
! AAGGGTATACATCATGCCTA+GGG - chr5_4:65303266-65303285 Msa0864760:intron 40.0%
TATACATCATGCCTAGGGTT+TGG - chr5_4:65303271-65303290 Msa0864760:intron 40.0%
!!! ATCACTGCTACTTTTGGGAA+TGG - chr5_4:65303372-65303391 Msa0864760:intron 40.0%
!!! TCACTGCTACTTTTGGGAAT+GGG - chr5_4:65303373-65303392 Msa0864760:intron 40.0%
!! GAGATTTTTCTTTGCTGTGG+CGG - chr5_4:65303456-65303475 Msa0864760:intron 40.0%
AGTGTTTGTGCATTCTTCAC+AGG + chr5_4:65303561-65303580 None:intergenic 40.0%
ACCATGGATGTCTTACAGAA+TGG - chr5_4:65303609-65303628 Msa0864760:intron 40.0%
CCATGGATGTCTTACAGAAT+GGG - chr5_4:65303610-65303629 Msa0864760:intron 40.0%
TTGTCGGTAAGCTTAGTATG+AGG - chr5_4:65303640-65303659 Msa0864760:intron 40.0%
TGTCGGTAAGCTTAGTATGA+GGG - chr5_4:65303641-65303660 Msa0864760:intron 40.0%
TGATGTGAATCCACAGACAA+TGG - chr5_4:65303716-65303735 Msa0864760:intron 40.0%
GATGTGAATCCACAGACAAT+GGG - chr5_4:65303717-65303736 Msa0864760:intron 40.0%
ATGGGGATATTGAATGCTAC+AGG - chr5_4:65303769-65303788 Msa0864760:intron 40.0%
! AATATGGCTCGAAATGGGTT+CGG - chr5_4:65303842-65303861 Msa0864760:intron 40.0%
! GAGTATTGCTCATTCCACTT+TGG + chr5_4:65303895-65303914 None:intergenic 40.0%
AGTGGAATGAGCAATACTCT+TGG - chr5_4:65303896-65303915 Msa0864760:intron 40.0%
GAGCAAACGATACAAGGATA+GGG - chr5_4:65303998-65304017 Msa0864760:intron 40.0%
AAACGATACAAGGATAGGGA+AGG - chr5_4:65304002-65304021 Msa0864760:intron 40.0%
GAAGGTTGAAGTTGAACAAG+AGG + chr5_4:65304081-65304100 None:intergenic 40.0%
CTTGTTCAACTTCAACCTTC+TGG - chr5_4:65304081-65304100 Msa0864760:intron 40.0%
AACAAACTATCGAGCTTGTG+CGG - chr5_4:65304250-65304269 Msa0864760:intron 40.0%
ACAACCTCATTTCTCAATGG+CGG + chr5_4:65304297-65304316 None:intergenic 40.0%
TAGATTCACGTGAAATCGTG+TGG - chr5_4:65304328-65304347 Msa0864760:intron 40.0%
!! ATTTTGACGACATACGCAAG+TGG - chr5_4:65304424-65304443 Msa0864760:intron 40.0%
TCTTCGAATTTGGATGGCAT+TGG + chr5_4:65304657-65304676 None:intergenic 40.0%
GATCGATTAAGAGTTTCTGC+TGG - chr5_4:65304699-65304718 Msa0864760:CDS 40.0%
TGGAAGAGTTGTAACACAGA+TGG - chr5_4:65304719-65304738 Msa0864760:CDS 40.0%
GGAAGAGTTGTAACACAGAT+GGG - chr5_4:65304720-65304739 Msa0864760:CDS 40.0%
ACATTGTAGCTGTTGAATCC+TGG + chr5_4:65304791-65304810 None:intergenic 40.0%
GTGTCTGATAATTGGGATTG+CGG - chr5_4:65304824-65304843 Msa0864760:five_prime_UTR 40.0%
GGAAAAGGTGAACGAAACAT+TGG + chr5_4:65304909-65304928 None:intergenic 40.0%
! AGGTAGGACCATTCTGAGAA+AGG - chr5_4:65297213-65297232 Msa0864760:CDS 45.0%
CGTGAAAGCCTTTCTCAGAA+TGG + chr5_4:65297224-65297243 None:intergenic 45.0%
!! ATTCGTCTTTTTCACGCGCT+CGG + chr5_4:65297350-65297369 None:intergenic 45.0%
TTTCGTGCTTCTGTTCCATC+TGG - chr5_4:65297707-65297726 Msa0864760:CDS 45.0%
ACTCGGCACAGTTAGTTACA+AGG - chr5_4:65298820-65298839 Msa0864760:CDS 45.0%
TAAACTGCACTGCCCTGTTT+AGG - chr5_4:65298946-65298965 Msa0864760:CDS 45.0%
GGTATGAGGCTGTTGAGTTA+CGG - chr5_4:65299099-65299118 Msa0864760:intron 45.0%
GTATGAGGCTGTTGAGTTAC+GGG - chr5_4:65299100-65299119 Msa0864760:intron 45.0%
! GGGGACAAAGGTGTATATCT+AGG - chr5_4:65299125-65299144 Msa0864760:intron 45.0%
CTCTTGCTCTTGTTCAGGAT+AGG - chr5_4:65299449-65299468 Msa0864760:intron 45.0%
!! TTTTGTTTGCAGGGGGAACT+TGG - chr5_4:65300136-65300155 Msa0864760:intron 45.0%
TTTGTTTGCAGGGGGAACTT+GGG - chr5_4:65300137-65300156 Msa0864760:intron 45.0%
TGTGTCCATTGCTGCATGTA+AGG - chr5_4:65300177-65300196 Msa0864760:intron 45.0%
!!! CTGGGTTAGTTTTTCCAGAC+AGG + chr5_4:65300355-65300374 None:intergenic 45.0%
ATAAGCGGTGGAAAACATGC+TGG - chr5_4:65300401-65300420 Msa0864760:intron 45.0%
TTTGGAGAGGGAAGAAACAG+GGG + chr5_4:65301163-65301182 None:intergenic 45.0%
GTTTGGAGAGGGAAGAAACA+GGG + chr5_4:65301164-65301183 None:intergenic 45.0%
TGTTTGGAGAGGGAAGAAAC+AGG + chr5_4:65301165-65301184 None:intergenic 45.0%
ACATCAAGGCTGTTTGGAGA+GGG + chr5_4:65301175-65301194 None:intergenic 45.0%
AGTGTCACATCAAGGCTGTT+TGG + chr5_4:65301181-65301200 None:intergenic 45.0%
!! AGGAGAGAAGTGTCACATCA+AGG + chr5_4:65301189-65301208 None:intergenic 45.0%
ATAACTCCAAAGGGGCTGTT+TGG + chr5_4:65301254-65301273 None:intergenic 45.0%
CCAAAAAGGGAGATGGATGA+CGG - chr5_4:65302017-65302036 Msa0864760:intron 45.0%
GTTGTTCATGACAAAAGGGC+AGG - chr5_4:65302576-65302595 Msa0864760:intron 45.0%
GGGCCACATAACTGTAATGT+CGG - chr5_4:65302619-65302638 Msa0864760:intron 45.0%
TGTAATGTCGGTGAAGATGG+TGG - chr5_4:65302631-65302650 Msa0864760:intron 45.0%
AAAGCTTGCCTGGAGACATT+AGG + chr5_4:65302664-65302683 None:intergenic 45.0%
! CAAGGGTATACATCATGCCT+AGG - chr5_4:65303265-65303284 Msa0864760:intron 45.0%
! AGTCTAAGACACCAAACCCT+AGG + chr5_4:65303285-65303304 None:intergenic 45.0%
!! CTACTTTTGGGAATGGGACT+GGG - chr5_4:65303379-65303398 Msa0864760:intron 45.0%
TGGAGCAAGGAACATTGACA+AGG - chr5_4:65303508-65303527 Msa0864760:intron 45.0%
GAACATTGACAAGGCACAAG+AGG - chr5_4:65303517-65303536 Msa0864760:intron 45.0%
TTGACAAGGCACAAGAGGTT+AGG - chr5_4:65303522-65303541 Msa0864760:intron 45.0%
TGACAAGGCACAAGAGGTTA+GGG - chr5_4:65303523-65303542 Msa0864760:intron 45.0%
ATGGTTACAATACGACGCTC+CGG + chr5_4:65303594-65303613 None:intergenic 45.0%
CCCATTCTGTAAGACATCCA+TGG + chr5_4:65303613-65303632 None:intergenic 45.0%
AATCCACAGACAATGGGATC+TGG - chr5_4:65303723-65303742 Msa0864760:intron 45.0%
GGAGCAAACGATACAAGGAT+AGG - chr5_4:65303997-65304016 Msa0864760:intron 45.0%
!! AGCGGATTGTCGAAATGTTG+TGG + chr5_4:65304201-65304220 None:intergenic 45.0%
TATAACTGAGCTGGAGACAG+CGG + chr5_4:65304219-65304238 None:intergenic 45.0%
TGAACCGCCATTGAGAAATG+AGG - chr5_4:65304290-65304309 Msa0864760:intron 45.0%
TTGCTGGCAACAACGATTGA+GGG + chr5_4:65304506-65304525 None:intergenic 45.0%
ATTGCTGGCAACAACGATTG+AGG + chr5_4:65304507-65304526 None:intergenic 45.0%
CTGCAGTTTCTCCATTGTAG+CGG + chr5_4:65304754-65304773 None:intergenic 45.0%
!!! GCAGTCTCTTTTGAGTTTCC+AGG - chr5_4:65304770-65304789 Msa0864760:exon 45.0%
GATAATTGGGATTGCGGCTT+TGG - chr5_4:65304830-65304849 Msa0864760:five_prime_UTR 45.0%
!! AATAAAATTGAATTATTATT+TGG - chr5_4:65301721-65301740 Msa0864760:intron 5.0%
! TGACGGCGTCTTCGAGTTTA+CGG + chr5_4:65297434-65297453 None:intergenic 50.0%
TACGATGAAGAGAACGGGGT+CGG + chr5_4:65297481-65297500 None:intergenic 50.0%
GTTCCATCTGGAAACTCCAC+TGG - chr5_4:65297719-65297738 Msa0864760:CDS 50.0%
ATGCCAGTGGAGTTTCCAGA+TGG + chr5_4:65297725-65297744 None:intergenic 50.0%
!! CCATGAAGGCACTGTCACTA+TGG + chr5_4:65298426-65298445 None:intergenic 50.0%
CCATAGTGACAGTGCCTTCA+TGG - chr5_4:65298423-65298442 Msa0864760:CDS 50.0%
GCGGTCTTTGAACAAACCAC+TGG - chr5_4:65298647-65298666 Msa0864760:intron 50.0%
!! TCTGCTGAACTGTGCTGACT+CGG - chr5_4:65298803-65298822 Msa0864760:CDS 50.0%
TTAGAACTGCCTGGCCAATG+TGG - chr5_4:65298905-65298924 Msa0864760:CDS 50.0%
CTCAATCAGCCTAGCCACAT+TGG + chr5_4:65298922-65298941 None:intergenic 50.0%
AGGCTGTTGAGTTACGGGAT+GGG - chr5_4:65299105-65299124 Msa0864760:intron 50.0%
!! ATCTGAGGCGCTGATTGGTA+TGG - chr5_4:65299190-65299209 Msa0864760:intron 50.0%
! TCAATCTGGGACTGCAGTGT+TGG + chr5_4:65299218-65299237 None:intergenic 50.0%
TTGTTTGCAGGGGGAACTTG+GGG - chr5_4:65300138-65300157 Msa0864760:intron 50.0%
TCCATTGCTGCATGTAAGGC+TGG - chr5_4:65300181-65300200 Msa0864760:intron 50.0%
CCATTGCTGCATGTAAGGCT+GGG - chr5_4:65300182-65300201 Msa0864760:intron 50.0%
CATTGCTGCATGTAAGGCTG+GGG - chr5_4:65300183-65300202 Msa0864760:intron 50.0%
GGGCTGCTGAAAAGGAAGTA+TGG - chr5_4:65300203-65300222 Msa0864760:intron 50.0%
TCAGCGATGTGCTTGTAGAG+TGG + chr5_4:65300332-65300351 None:intergenic 50.0%
!! AAGCAGGAACAGGAAGCACT+GGG + chr5_4:65300373-65300392 None:intergenic 50.0%
! AAAGCAGGAACAGGAAGCAC+TGG + chr5_4:65300374-65300393 None:intergenic 50.0%
CTCACGTTTCTTCGCACCTT+TGG - chr5_4:65301092-65301111 Msa0864760:intron 50.0%
CACATCAAGGCTGTTTGGAG+AGG + chr5_4:65301176-65301195 None:intergenic 50.0%
ACTGCGTGACACTTTAAGCC+AGG + chr5_4:65301505-65301524 None:intergenic 50.0%
TCCACCTCTCTTCGTACTCT+TGG - chr5_4:65301781-65301800 Msa0864760:CDS 50.0%
! AAGGCCAAGAGTACGAAGAG+AGG + chr5_4:65301788-65301807 None:intergenic 50.0%
ATGCTAGACATGGGCACTTG+TGG - chr5_4:65301929-65301948 Msa0864760:intron 50.0%
GGTTGCAGGAGTGAGTTCAT+CGG - chr5_4:65301950-65301969 Msa0864760:intron 50.0%
! CAGGAGTGAGTTCATCGGTT+TGG - chr5_4:65301955-65301974 Msa0864760:intron 50.0%
! CCGTCATCCATCTCCCTTTT+TGG + chr5_4:65302020-65302039 None:intergenic 50.0%
GCTTTGCTCCTAATGTCTCC+AGG - chr5_4:65302653-65302672 Msa0864760:intron 50.0%
GGTGCTAGTGCACTATCAGT+TGG + chr5_4:65303083-65303102 None:intergenic 50.0%
!!! GCTACTTTTGGGAATGGGAC+TGG - chr5_4:65303378-65303397 Msa0864760:intron 50.0%
TGGTTACAATACGACGCTCC+GGG + chr5_4:65303593-65303612 None:intergenic 50.0%
!! GGAGCGTCGTATTGTAACCA+TGG - chr5_4:65303593-65303612 Msa0864760:intron 50.0%
GCTTAGTATGAGGGCCACTT+TGG - chr5_4:65303650-65303669 Msa0864760:intron 50.0%
! AGTATGAGGGCCACTTTGGA+TGG - chr5_4:65303654-65303673 Msa0864760:intron 50.0%
ATGATACCCGCCATCCAAAG+TGG + chr5_4:65303667-65303686 None:intergenic 50.0%
TTCACATCAGTGCTGTACCG+TGG + chr5_4:65303705-65303724 None:intergenic 50.0%
TCTCCAGATCCCATTGTCTG+TGG + chr5_4:65303729-65303748 None:intergenic 50.0%
GGGATCTGGAGACCAAACAT+TGG - chr5_4:65303737-65303756 Msa0864760:intron 50.0%
CTTCCAGCGATGAAACCTCA+TGG - chr5_4:65303793-65303812 Msa0864760:intron 50.0%
CTGCTGGAGCAAACGATACA+AGG - chr5_4:65303992-65304011 Msa0864760:intron 50.0%
ACCTTCTGGGCTGAAGAAGA+TGG - chr5_4:65304095-65304114 Msa0864760:intron 50.0%
CCTTCTGGGCTGAAGAAGAT+GGG - chr5_4:65304096-65304115 Msa0864760:intron 50.0%
CTTCTGGGCTGAAGAAGATG+GGG - chr5_4:65304097-65304116 Msa0864760:intron 50.0%
TTCTGGGCTGAAGAAGATGG+GGG - chr5_4:65304098-65304117 Msa0864760:intron 50.0%
! GACGGCGTCTTCGAGTTTAC+GGG + chr5_4:65297433-65297452 None:intergenic 55.0%
!!! GTCGGAGGTTTTGGCTCTGA+CGG + chr5_4:65297463-65297482 None:intergenic 55.0%
GAGGCTGTTGAGTTACGGGA+TGG - chr5_4:65299104-65299123 Msa0864760:intron 55.0%
GGCTGTTGAGTTACGGGATG+GGG - chr5_4:65299106-65299125 Msa0864760:intron 55.0%
GAGTTACGGGATGGGGACAA+AGG - chr5_4:65299113-65299132 Msa0864760:intron 55.0%
CCCAGCCTTACATGCAGCAA+TGG + chr5_4:65300185-65300204 None:intergenic 55.0%
TAAGGCTGGGGCTGCTGAAA+AGG - chr5_4:65300195-65300214 Msa0864760:intron 55.0%
AAGCACATCGCTGACCTGTC+TGG - chr5_4:65300338-65300357 Msa0864760:intron 55.0%
CCAAAGGGGCTGTTTGGTTG+AGG + chr5_4:65301248-65301267 None:intergenic 55.0%
CCTCAACCAAACAGCCCCTT+TGG - chr5_4:65301245-65301264 Msa0864760:intron 55.0%
! GCCAAGAGTACGAAGAGAGG+TGG + chr5_4:65301785-65301804 None:intergenic 55.0%
ACATGGGCACTTGTGGTTGC+AGG - chr5_4:65301936-65301955 Msa0864760:intron 55.0%
GACTGGGATCGCTAGCAAGT+TGG - chr5_4:65303395-65303414 Msa0864760:intron 55.0%
! ATGAGGGCCACTTTGGATGG+CGG - chr5_4:65303657-65303676 Msa0864760:intron 55.0%
CGACCATGAGGTTTCATCGC+TGG + chr5_4:65303799-65303818 None:intergenic 55.0%
CCCATCTTCTTCAGCCCAGA+AGG + chr5_4:65304099-65304118 None:intergenic 55.0%
GGGTGAGTTTGCCGCTACAA+TGG - chr5_4:65304740-65304759 Msa0864760:CDS 55.0%
!!! GGAGGTTTTGGCTCTGACGG+CGG + chr5_4:65297460-65297479 None:intergenic 60.0%
! GAGAACGGGGTCGGAGGTTT+TGG + chr5_4:65297472-65297491 None:intergenic 60.0%
GATGAAGAGAACGGGGTCGG+AGG + chr5_4:65297478-65297497 None:intergenic 60.0%
CCTCGGATCGCAGAAACCAG+TGG + chr5_4:65298666-65298685 None:intergenic 60.0%
!! CCACTGGTTTCTGCGATCCG+AGG - chr5_4:65298663-65298682 Msa0864760:intron 60.0%
ACTGCCTGGCCAATGTGGCT+AGG - chr5_4:65298910-65298929 Msa0864760:CDS 60.0%
TCAGCCTAGCCACATTGGCC+AGG + chr5_4:65298917-65298936 None:intergenic 60.0%
! TGAGGGCCACTTTGGATGGC+GGG - chr5_4:65303658-65303677 Msa0864760:intron 60.0%
!! TAGGCATCGGTGCGACCATG+AGG + chr5_4:65303811-65303830 None:intergenic 60.0%
CACGCGCTCGGAGATGAGAG+TGG + chr5_4:65297338-65297357 None:intergenic 65.0%
! GGCTCTGACGGCGGCATTGA+CGG + chr5_4:65297451-65297470 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 65297198 65304980 65297198 ID=Msa0864760;Name=Msa0864760
chr5_4 mRNA 65297198 65304980 65297198 ID=Msa0864760-mRNA-1;Parent=Msa0864760;Name=Msa0864760-mRNA-1;_AED=0.07;_eAED=0.13;_QI=195|0.66|0.6|1|1|1|10|0|790
chr5_4 exon 65297198 65298446 65297198 ID=Msa0864760-mRNA-1:exon:20620;Parent=Msa0864760-mRNA-1
chr5_4 exon 65298533 65298661 65298533 ID=Msa0864760-mRNA-1:exon:20619;Parent=Msa0864760-mRNA-1
chr5_4 exon 65298766 65299003 65298766 ID=Msa0864760-mRNA-1:exon:20618;Parent=Msa0864760-mRNA-1
chr5_4 exon 65299529 65299580 65299529 ID=Msa0864760-mRNA-1:exon:20617;Parent=Msa0864760-mRNA-1
chr5_4 exon 65299799 65299879 65299799 ID=Msa0864760-mRNA-1:exon:20616;Parent=Msa0864760-mRNA-1
chr5_4 exon 65301736 65301852 65301736 ID=Msa0864760-mRNA-1:exon:20615;Parent=Msa0864760-mRNA-1
chr5_4 exon 65301959 65302030 65301959 ID=Msa0864760-mRNA-1:exon:20614;Parent=Msa0864760-mRNA-1
chr5_4 exon 65302904 65303078 65302904 ID=Msa0864760-mRNA-1:exon:20613;Parent=Msa0864760-mRNA-1
chr5_4 exon 65304434 65304588 65304434 ID=Msa0864760-mRNA-1:exon:20612;Parent=Msa0864760-mRNA-1
chr5_4 exon 65304681 65304980 65304681 ID=Msa0864760-mRNA-1:exon:20611;Parent=Msa0864760-mRNA-1
chr5_4 five_prime_UTR 65304786 65304980 65304786 ID=Msa0864760-mRNA-1:five_prime_utr;Parent=Msa0864760-mRNA-1
chr5_4 CDS 65304681 65304785 65304681 ID=Msa0864760-mRNA-1:cds;Parent=Msa0864760-mRNA-1
chr5_4 CDS 65304434 65304588 65304434 ID=Msa0864760-mRNA-1:cds;Parent=Msa0864760-mRNA-1
chr5_4 CDS 65302904 65303078 65302904 ID=Msa0864760-mRNA-1:cds;Parent=Msa0864760-mRNA-1
chr5_4 CDS 65301959 65302030 65301959 ID=Msa0864760-mRNA-1:cds;Parent=Msa0864760-mRNA-1
chr5_4 CDS 65301736 65301852 65301736 ID=Msa0864760-mRNA-1:cds;Parent=Msa0864760-mRNA-1
chr5_4 CDS 65299799 65299879 65299799 ID=Msa0864760-mRNA-1:cds;Parent=Msa0864760-mRNA-1
chr5_4 CDS 65299529 65299580 65299529 ID=Msa0864760-mRNA-1:cds;Parent=Msa0864760-mRNA-1
chr5_4 CDS 65298766 65299003 65298766 ID=Msa0864760-mRNA-1:cds;Parent=Msa0864760-mRNA-1
chr5_4 CDS 65298533 65298661 65298533 ID=Msa0864760-mRNA-1:cds;Parent=Msa0864760-mRNA-1
chr5_4 CDS 65297198 65298446 65297198 ID=Msa0864760-mRNA-1:cds;Parent=Msa0864760-mRNA-1
Gene Sequence

>Msa0864760

ATGTCCGTTCAAGAATATCTTGATAAATACATGCTTTCCCGTAAACTCGAAGACGCCGTCAATGCCGCCGTCAGAGCCAAAACCTCCGACCCCGTTCTCTTCATCTCGAATCATATGAAAAAAGGAGTACAATCGGTGATTACGAAAGTAAAAGCGAGGCAAATTCTTGATAGTAGAGGAATTCCAACTGTTGAAGTTGATTTGTATACTAACAAAGCTATGTTTCGTGCTTCTGTTCCATCTGGAAACTCCACTGGCATGTATGAGGCTGTTGAGTTACGGGATGGGGACAAAGGTGTATATCTAGGAAACGGTGTTGCTAAAGCTGTTAAAAATATAAATGAGAAAATATCTGAGGCGCTGATTGGTATGGATCCAACACTGCAGTCCCAGATTGATCATGCTATGATAGACCTTGACAAAACAGAGAAAAAGGGGGAACTTGGGGCAAATGCTATATTAGCTGTGTCCATTGCTGCATGTAAGGCTGGGGCTGCTGAAAAGGAAGTTCCACTCTACAAGCACATCGCTGACCTGTCTGGAAAAACTAACCCAGTGCTTCCTGTTCCTGCTTTTACTGTTATAAGCGGTGGAAAACATGCTGGAAATAATCTGGCAATTGAGGAAATCATGATTCTTCCAATTGGAGCAAGCAGATTTGATGAAGCACTGCGAATGGGCTCTGAGACCTATCATCATTTAAAGGCTGTTATTACAGAAAAATGTGGGCCACATAACTGTAATGTCGGTGAAGATGGAAATCAAGCTGATGAAGCATTTCATGAAGCTTTGCATTTACAATTAGATAATGTGCTAATTGGTGCTCGCCATACTCTTAATACTTGCTCAAGGGTATACATCATGCCTAGGGTTTGGTGTCTTAGACTTGATTTTATTCAAGTTGAGGGACTTATACTTGAAGTTGATGACCCATCTGAAAGCTCTGACATTTTCATCACTGCTACTTTTGGGAATGGGACTGGGATCGCTAGCAAGAACATTGACAAGGCACAAGAGGTTAGGGACATGTGTATTTCCTGTGAAGAATGCACAAACACTATTACAAGACCCGGAGCGTCGTATTGTAACCATGGATGTCTTACAGAATGGGAGATTTTTTGTCGACAATGGGATCTGGAGACCAAACATTGGAGTTTTGAGATGGGGATATTGAATGCTACAGGTCTTCCAGCGATGAAACCTCATGGTCGCACCGATGCCTATTGTGTAGCTAAATATGGCTCGAAATGGGTTCGGTCAAGAACCGTTGTTAATAGTCTTTCTCCAAAGTGGAATGAGCAATACTCTTGGAATGTCTACGATCCATCTACATTTTTCGTTATTTCTGTGTTTGATAATAGTCAATTACATGAAGAATATATAGCTGCTGGAGCAAACGATACAAGGATAGGGAAGGTGAGAATTAGTCTATCAGAAATGGTAATCAATACCGTTTACAATTATTCTTATCCTCTTGTTCAACTTCAACCTTCTGGGCTGAAGAAGATGGGGGAAATTCAGTTGTCTTTCAAGTTAACTTGCCCTTCTATAGCTAATTTGTATAAAAAGTACACAATGCCAATGCTTTTTCCACAACATTTCGACAATCCGCTGTCTCCAGCTCAGTTATACGAATTAAGGCAACAAACTATCGAGCTTGTGCGGTCAAATATGAGCAAAGCTGAACCGCCATTGAGAAATGAGGTTGTTGATTATATGCTAGATTCACGTGAAATCGTGTGGAGTATGAGAAGATGTAAAGCTGATTTTGAGAGGATTAACGTCTTTCTAAATTGCTTGGTTGGTATTTACACTTATTTTGACGACATACGCAAGTGGAAAGATCTTGTTTCACCAATTATAGCTCACTTGTTGCTCGTCATCTTGTTCTTTCTCCCTCAATCGTTGTTGCCAGCAATATTTCTTGCTCTTATAGTCCATATGCTGCTGCAATTTCAAATCAAGCCAAAAACACTATCCCATGTAGATTTGCATTTGTCTCATGTGCATACAGCAAGTATAGATGAATTGGAAGAAGAGTTTGATCCAATGCCATCCAAATTCGAAGATGTCATTTTGATGAATAGATATGATCGATTAAGAGTTTCTGCTGGAAGAGTTGTAACACAGATGGGTGAGTTTGCCGCTACAATGGAGAAACTGCAGTCTCTTTTGAGTTTCCAGGATTCAACAGCTACAATGTTAGTTATGATTTCGTGTCTGATAATTGGGATTGCGGCTTTGGCTGTTCCTTTCCGATATCTTGTCTTTGTTTGGTTTCTTTATTTTCTAAGGCATCCAATGTTTCGTTCACCTTTTCCTCCATTTTATGAAAATGGATTAGAAGGATGCCTTCAAAATTGGATAGCATGA

Protein sequence

>Msa0864760

MSVQEYLDKYMLSRKLEDAVNAAVRAKTSDPVLFISNHMKKGVQSVITKVKARQILDSRGIPTVEVDLYTNKAMFRASVPSGNSTGMYEAVELRDGDKGVYLGNGVAKAVKNINEKISEALIGMDPTLQSQIDHAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLSGKTNPVLPVPAFTVISGGKHAGNNLAIEEIMILPIGASRFDEALRMGSETYHHLKAVITEKCGPHNCNVGEDGNQADEAFHEALHLQLDNVLIGARHTLNTCSRVYIMPRVWCLRLDFIQVEGLILEVDDPSESSDIFITATFGNGTGIASKNIDKAQEVRDMCISCEECTNTITRPGASYCNHGCLTEWEIFCRQWDLETKHWSFEMGILNATGLPAMKPHGRTDAYCVAKYGSKWVRSRTVVNSLSPKWNEQYSWNVYDPSTFFVISVFDNSQLHEEYIAAGANDTRIGKVRISLSEMVINTVYNYSYPLVQLQPSGLKKMGEIQLSFKLTCPSIANLYKKYTMPMLFPQHFDNPLSPAQLYELRQQTIELVRSNMSKAEPPLRNEVVDYMLDSREIVWSMRRCKADFERINVFLNCLVGIYTYFDDIRKWKDLVSPIIAHLLLVILFFLPQSLLPAIFLALIVHMLLQFQIKPKTLSHVDLHLSHVHTASIDELEEEFDPMPSKFEDVILMNRYDRLRVSAGRVVTQMGEFAATMEKLQSLLSFQDSTATMLVMISCLIIGIAALAVPFRYLVFVWFLYFLRHPMFRSPFPPFYENGLEGCLQNWIA*