Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0864760 | XP_003617923.1 | 84.337 | 83 | 12 | 1 | 253 | 334 | 160 | 242 | 1.07e-32 | 148 |
Msa0864760 | XP_003617923.1 | 94.162 | 394 | 23 | 0 | 386 | 779 | 357 | 750 | 0.0 | 759 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0864760 | sp|Q9ZW34|ENO3_ARATH | 81.716 | 268 | 47 | 1 | 1 | 266 | 1 | 268 | 3.95e-146 | 440 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0864760 | G7KEK7 | 84.337 | 83 | 12 | 1 | 253 | 334 | 160 | 242 | 5.09e-33 | 148 |
Msa0864760 | G7KEK7 | 94.162 | 394 | 23 | 0 | 386 | 779 | 357 | 750 | 0.0 | 759 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0747330 | Msa0864760 | 0.849484 | 3.139532e-60 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0864760 | MtrunA17_Chr5g0447321 | 94.162 | 394 | 23 | 0 | 386 | 779 | 357 | 750 | 0.0 | 759 |
Msa0864760 | MtrunA17_Chr5g0447321 | 84.337 | 83 | 12 | 1 | 253 | 334 | 160 | 242 | 9.81e-37 | 148 |
Msa0864760 | MtrunA17_Chr5g0447301 | 95.880 | 267 | 11 | 0 | 1 | 267 | 1 | 267 | 0.0 | 523 |
Msa0864760 | MtrunA17_Chr1g0174761 | 46.429 | 392 | 207 | 1 | 386 | 774 | 365 | 756 | 1.39e-117 | 373 |
Msa0864760 | MtrunA17_Chr7g0258331 | 46.819 | 393 | 205 | 2 | 386 | 774 | 365 | 757 | 2.06e-117 | 372 |
Msa0864760 | MtrunA17_Chr1g0174581 | 45.707 | 396 | 207 | 5 | 386 | 774 | 385 | 779 | 1.16e-110 | 355 |
Msa0864760 | MtrunA17_Chr4g0033151 | 45.663 | 392 | 207 | 2 | 386 | 774 | 364 | 752 | 2.90e-106 | 343 |
Msa0864760 | MtrunA17_Chr4g0028371 | 46.287 | 404 | 209 | 2 | 386 | 782 | 371 | 773 | 9.49e-106 | 342 |
Msa0864760 | MtrunA17_Chr3g0087501 | 44.307 | 404 | 214 | 5 | 386 | 779 | 407 | 809 | 3.00e-105 | 342 |
Msa0864760 | MtrunA17_Chr4g0010751 | 44.670 | 394 | 212 | 4 | 386 | 774 | 784 | 1176 | 3.72e-105 | 349 |
Msa0864760 | MtrunA17_Chr4g0060191 | 42.211 | 398 | 218 | 4 | 386 | 775 | 628 | 1021 | 3.96e-100 | 333 |
Msa0864760 | MtrunA17_Chr4g0014711 | 42.967 | 391 | 218 | 3 | 386 | 774 | 639 | 1026 | 1.22e-99 | 332 |
Msa0864760 | MtrunA17_Chr5g0397601 | 41.624 | 394 | 221 | 5 | 386 | 774 | 600 | 989 | 4.01e-99 | 330 |
Msa0864760 | MtrunA17_Chr8g0349231 | 40.561 | 392 | 226 | 2 | 386 | 774 | 598 | 985 | 7.67e-99 | 328 |
Msa0864760 | MtrunA17_Chr4g0035961 | 43.069 | 404 | 171 | 3 | 386 | 782 | 371 | 722 | 3.45e-98 | 320 |
Msa0864760 | MtrunA17_Chr6g0460791 | 39.447 | 398 | 232 | 2 | 386 | 779 | 604 | 996 | 1.08e-97 | 326 |
Msa0864760 | MtrunA17_Chr7g0247271 | 39.898 | 391 | 230 | 2 | 386 | 774 | 561 | 948 | 3.44e-94 | 315 |
Msa0864760 | MtrunA17_Chr1g0151051 | 40.920 | 413 | 228 | 3 | 383 | 779 | 373 | 785 | 1.21e-93 | 310 |
Msa0864760 | MtrunA17_Chr2g0307671 | 56.087 | 230 | 98 | 2 | 44 | 271 | 62 | 290 | 3.57e-77 | 258 |
Msa0864760 | MtrunA17_Chr6g0461151 | 36.567 | 402 | 243 | 5 | 385 | 774 | 607 | 1008 | 5.19e-76 | 266 |
Msa0864760 | MtrunA17_Chr7g0265741 | 59.722 | 216 | 79 | 4 | 45 | 253 | 2 | 216 | 2.82e-73 | 246 |
Msa0864760 | MtrunA17_Chr6g0476311 | 60.465 | 215 | 77 | 4 | 47 | 254 | 5 | 218 | 9.53e-73 | 244 |
Msa0864760 | MtrunA17_Chr4g0010641 | 42.017 | 119 | 67 | 2 | 662 | 779 | 1 | 118 | 5.98e-21 | 89.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0864760 | AT2G29560.1 | 81.716 | 268 | 47 | 1 | 1 | 266 | 1 | 268 | 4.01e-147 | 440 |
Msa0864760 | AT3G57880.4 | 46.429 | 392 | 207 | 1 | 386 | 774 | 364 | 755 | 7.79e-118 | 374 |
Msa0864760 | AT3G57880.2 | 46.429 | 392 | 207 | 1 | 386 | 774 | 364 | 755 | 7.79e-118 | 374 |
Msa0864760 | AT3G57880.3 | 46.429 | 392 | 207 | 1 | 386 | 774 | 364 | 755 | 7.79e-118 | 374 |
Msa0864760 | AT3G57880.1 | 46.429 | 392 | 207 | 1 | 386 | 774 | 364 | 755 | 7.79e-118 | 374 |
Msa0864760 | AT1G51570.1 | 45.431 | 394 | 210 | 2 | 386 | 774 | 365 | 758 | 1.37e-113 | 363 |
Msa0864760 | AT5G12970.1 | 43.878 | 392 | 213 | 2 | 386 | 774 | 364 | 751 | 1.55e-108 | 349 |
Msa0864760 | AT5G06850.1 | 44.557 | 395 | 212 | 4 | 386 | 774 | 383 | 776 | 7.88e-106 | 343 |
Msa0864760 | AT5G48060.1 | 43.467 | 398 | 221 | 2 | 386 | 779 | 626 | 1023 | 1.67e-103 | 342 |
Msa0864760 | AT4G20080.1 | 43.325 | 397 | 205 | 5 | 386 | 770 | 363 | 751 | 3.50e-103 | 335 |
Msa0864760 | AT1G74720.1 | 43.147 | 394 | 218 | 3 | 386 | 774 | 671 | 1063 | 1.64e-102 | 340 |
Msa0864760 | AT4G11610.3 | 39.541 | 392 | 230 | 2 | 386 | 774 | 469 | 856 | 6.21e-100 | 329 |
Msa0864760 | AT4G11610.2 | 39.541 | 392 | 230 | 2 | 386 | 774 | 602 | 989 | 5.05e-99 | 330 |
Msa0864760 | AT4G11610.1 | 39.541 | 392 | 230 | 2 | 386 | 774 | 606 | 993 | 6.11e-99 | 330 |
Msa0864760 | AT1G22610.1 | 42.199 | 391 | 221 | 3 | 386 | 774 | 624 | 1011 | 5.83e-98 | 327 |
Msa0864760 | AT4G00700.1 | 41.414 | 396 | 220 | 3 | 386 | 774 | 598 | 988 | 1.21e-96 | 323 |
Msa0864760 | AT4G00700.2 | 41.414 | 396 | 220 | 3 | 386 | 774 | 598 | 988 | 1.21e-96 | 323 |
Msa0864760 | AT3G03680.1 | 39.340 | 394 | 234 | 2 | 386 | 774 | 606 | 999 | 3.91e-94 | 317 |
Msa0864760 | AT3G61300.1 | 40.355 | 394 | 228 | 4 | 386 | 775 | 565 | 955 | 2.07e-93 | 314 |
Msa0864760 | AT1G04150.1 | 43.797 | 395 | 212 | 4 | 386 | 774 | 604 | 994 | 2.93e-93 | 314 |
Msa0864760 | AT5G17980.1 | 39.646 | 396 | 230 | 5 | 387 | 774 | 637 | 1031 | 5.56e-81 | 281 |
Msa0864760 | AT1G74030.1 | 58.036 | 224 | 86 | 3 | 40 | 256 | 37 | 259 | 2.53e-76 | 255 |
Msa0864760 | AT2G36530.1 | 59.361 | 219 | 81 | 4 | 45 | 256 | 2 | 219 | 2.39e-72 | 244 |
Msa0864760 | AT3G61720.1 | 35.308 | 422 | 236 | 10 | 386 | 774 | 360 | 777 | 1.05e-64 | 231 |
Msa0864760 | AT5G03435.1 | 35.484 | 403 | 215 | 14 | 386 | 773 | 351 | 723 | 2.21e-61 | 221 |
Msa0864760 | AT2G36530.2 | 57.576 | 198 | 76 | 4 | 66 | 256 | 12 | 208 | 2.53e-61 | 213 |
Msa0864760 | AT5G03435.2 | 44.550 | 211 | 108 | 5 | 386 | 592 | 351 | 556 | 6.91e-47 | 176 |
Find 159 sgRNAs with CRISPR-Local
Find 454 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAAAATGACATCTTCGAATT+TGG | 0.126917 | 5_4:+65297492 | None:intergenic |
CTTGTTCAACTTCAACCTTC+TGG | 0.144743 | 5_4:-65298075 | Msa0864760:CDS |
ATGATTTCGTGTCTGATAAT+TGG | 0.169783 | 5_4:-65297340 | Msa0864760:CDS |
CAATTAGATAATGTGCTAAT+TGG | 0.209789 | 5_4:-65298940 | Msa0864760:CDS |
TAGAAGGATGCCTTCAAAAT+TGG | 0.226142 | 5_4:-65297207 | Msa0864760:CDS |
GAGAACGGGGTCGGAGGTTT+TGG | 0.248202 | 5_4:+65304687 | None:intergenic |
TGAGACCTATCATCATTTAA+AGG | 0.262267 | 5_4:-65299798 | Msa0864760:intron |
GCCTATTGTGTAGCTAAATA+TGG | 0.266902 | 5_4:-65298330 | Msa0864760:CDS |
CAGCTCAGTTATACGAATTA+AGG | 0.282216 | 5_4:-65297930 | Msa0864760:CDS |
TTGTTCAACTTCAACCTTCT+GGG | 0.302539 | 5_4:-65298074 | Msa0864760:CDS |
TCCGATATCTTGTCTTTGTT+TGG | 0.302724 | 5_4:-65297294 | Msa0864760:CDS |
GATAATTGGGATTGCGGCTT+TGG | 0.304173 | 5_4:-65297326 | Msa0864760:CDS |
CCTTGACAAAACAGAGAAAA+AGG | 0.305149 | 5_4:-65302903 | Msa0864760:intron |
TTATACAAATTAGCTATAGA+AGG | 0.307770 | 5_4:+65298006 | None:intergenic |
GGCTCTGACGGCGGCATTGA+CGG | 0.326530 | 5_4:+65304708 | None:intergenic |
TGACGGCGTCTTCGAGTTTA+CGG | 0.335239 | 5_4:+65304725 | None:intergenic |
TACAGCAAGTATAGATGAAT+TGG | 0.342398 | 5_4:-65297539 | Msa0864760:CDS |
TCAAATCTGCTTGCTCCAAT+TGG | 0.357446 | 5_4:+65299842 | None:intergenic |
TCCATTGCTGCATGTAAGGC+TGG | 0.359024 | 5_4:-65301975 | Msa0864760:CDS |
CATTTCTACGATCGATTCTT+CGG | 0.368421 | 5_4:+65304783 | None:intergenic |
AGCAACAAGTGAGCTATAAT+TGG | 0.372058 | 5_4:+65297694 | None:intergenic |
TGATTTCGTGTCTGATAATT+GGG | 0.372413 | 5_4:-65297339 | Msa0864760:CDS |
TTTGAAATTGCAGCAGCATA+TGG | 0.384047 | 5_4:+65297611 | None:intergenic |
TAGCTAAATATGGCTCGAAA+TGG | 0.385736 | 5_4:-65298320 | Msa0864760:CDS |
GTATGAGGCTGTTGAGTTAC+GGG | 0.389583 | 5_4:-65303056 | Msa0864760:CDS |
TTGACAAGGCACAAGAGGTT+AGG | 0.393288 | 5_4:-65298634 | Msa0864760:CDS |
TTTCGTGCTTCTGTTCCATC+TGG | 0.400465 | 5_4:-65304449 | Msa0864760:CDS |
TTGAGCAAGTATTAAGAGTA+TGG | 0.401851 | 5_4:+65298911 | None:intergenic |
CTATCATAGCATGATCAATC+TGG | 0.408498 | 5_4:+65302927 | None:intergenic |
GATGATTCATTTCAGGTATG+AGG | 0.417338 | 5_4:-65303071 | Msa0864760:intron |
AAGCACATCGCTGACCTGTC+TGG | 0.418545 | 5_4:-65301818 | Msa0864760:CDS |
GGTATGAGGCTGTTGAGTTA+CGG | 0.423365 | 5_4:-65303057 | Msa0864760:CDS |
CATCTCAAAACTCCAATGTT+TGG | 0.426226 | 5_4:+65298407 | None:intergenic |
GAGAATTAGTCTATCAGAAA+TGG | 0.430113 | 5_4:-65298130 | Msa0864760:CDS |
GTCTTTCTAAATTGCTTGGT+TGG | 0.431013 | 5_4:-65297766 | Msa0864760:CDS |
ATAAGAGCAAGAAATATTGC+TGG | 0.440753 | 5_4:+65297637 | None:intergenic |
AAAACATGCTGGAAATAATC+TGG | 0.443130 | 5_4:-65301744 | Msa0864760:CDS |
TGTGTCCATTGCTGCATGTA+AGG | 0.445103 | 5_4:-65301979 | Msa0864760:CDS |
TCTTCGAATTTGGATGGCAT+TGG | 0.445316 | 5_4:+65297502 | None:intergenic |
CCCATCTTCTTCAGCCCAGA+AGG | 0.445430 | 5_4:+65298060 | None:intergenic |
AATCACCTTTAAATGATGAT+AGG | 0.445742 | 5_4:+65299793 | None:intergenic |
GATATTACGATGAAGAGAAC+GGG | 0.448791 | 5_4:+65304673 | None:intergenic |
GAAATCATGATTCTTCCAAT+TGG | 0.450349 | 5_4:-65299857 | Msa0864760:CDS |
TAACGTCTTTCTAAATTGCT+TGG | 0.451411 | 5_4:-65297770 | Msa0864760:CDS |
ACCTTCTGGGCTGAAGAAGA+TGG | 0.453795 | 5_4:-65298061 | Msa0864760:CDS |
TAAGGCTGGGGCTGCTGAAA+AGG | 0.454878 | 5_4:-65301961 | Msa0864760:CDS |
CCATTGCTGCATGTAAGGCT+GGG | 0.459396 | 5_4:-65301974 | Msa0864760:CDS |
CATGAAGAATATATAGCTGC+TGG | 0.466302 | 5_4:-65298180 | Msa0864760:CDS |
AGGATAAGAATAATTGTAAA+CGG | 0.466893 | 5_4:+65298098 | None:intergenic |
GCCATATTTAGCTACACAAT+AGG | 0.467616 | 5_4:+65298329 | None:intergenic |
ACCAAACAAAGACAAGATAT+CGG | 0.468171 | 5_4:+65297293 | None:intergenic |
GGGGACAAAGGTGTATATCT+AGG | 0.471083 | 5_4:-65303031 | Msa0864760:CDS |
AGCTAAATATGGCTCGAAAT+GGG | 0.471891 | 5_4:-65298319 | Msa0864760:CDS |
CCTTCTGGGCTGAAGAAGAT+GGG | 0.476074 | 5_4:-65298060 | Msa0864760:CDS |
GACGGCGTCTTCGAGTTTAC+GGG | 0.479590 | 5_4:+65304726 | None:intergenic |
ACATTGTAGCTGTTGAATCC+TGG | 0.480980 | 5_4:+65297368 | None:intergenic |
AGTGTTTGTGCATTCTTCAC+AGG | 0.481116 | 5_4:+65298598 | None:intergenic |
AAAATATCTGAGGCGCTGAT+TGG | 0.482231 | 5_4:-65302971 | Msa0864760:CDS |
AATCCACAGACAATGGGATC+TGG | 0.483010 | 5_4:-65298433 | Msa0864760:intron |
TGGAAATAATCTGGCAATTG+AGG | 0.486178 | 5_4:-65301735 | Msa0864760:intron |
CCATGGATGTCTTACAGAAT+GGG | 0.489043 | 5_4:-65298546 | Msa0864760:CDS |
AAAGCAGGAACAGGAAGCAC+TGG | 0.490991 | 5_4:+65301785 | None:intergenic |
TATACATCATGCCTAGGGTT+TGG | 0.493217 | 5_4:-65298885 | Msa0864760:CDS |
CTTAATTCGTATAACTGAGC+TGG | 0.493792 | 5_4:+65297931 | None:intergenic |
GGCTGTTGAGTTACGGGATG+GGG | 0.493888 | 5_4:-65303050 | Msa0864760:CDS |
TTAATAGTCTTTCTCCAAAG+TGG | 0.496144 | 5_4:-65298278 | Msa0864760:CDS |
ATAACAGTAAAAGCAGGAAC+AGG | 0.498354 | 5_4:+65301776 | None:intergenic |
ACCATGGATGTCTTACAGAA+TGG | 0.500182 | 5_4:-65298547 | Msa0864760:CDS |
TACAAATCAACTTCAACAGT+TGG | 0.502701 | 5_4:+65304488 | None:intergenic |
AGTGGAATGAGCAATACTCT+TGG | 0.503212 | 5_4:-65298260 | Msa0864760:CDS |
CGACCATGAGGTTTCATCGC+TGG | 0.505576 | 5_4:+65298360 | None:intergenic |
ATGGGGATATTGAATGCTAC+AGG | 0.508985 | 5_4:-65298387 | Msa0864760:CDS |
ATCTGAGGCGCTGATTGGTA+TGG | 0.509293 | 5_4:-65302966 | Msa0864760:CDS |
CTGCTGGAGCAAACGATACA+AGG | 0.509781 | 5_4:-65298164 | Msa0864760:CDS |
AACTGTAATGTCGGTGAAGA+TGG | 0.515053 | 5_4:-65299528 | Msa0864760:intron |
TATACAAATTAGCTATAGAA+GGG | 0.516654 | 5_4:+65298007 | None:intergenic |
ATTTGATGAAGCACTGCGAA+TGG | 0.517360 | 5_4:-65299825 | Msa0864760:CDS |
GATGTGAATCCACAGACAAT+GGG | 0.518505 | 5_4:-65298439 | Msa0864760:intron |
TTGCTGGCAACAACGATTGA+GGG | 0.519256 | 5_4:+65297653 | None:intergenic |
TGACAAGGCACAAGAGGTTA+GGG | 0.524242 | 5_4:-65298633 | Msa0864760:CDS |
TGGTTACAATACGACGCTCC+GGG | 0.524596 | 5_4:+65298566 | None:intergenic |
CAAGGGTATACATCATGCCT+AGG | 0.525341 | 5_4:-65298891 | Msa0864760:CDS |
ATGGTTACAATACGACGCTC+CGG | 0.526589 | 5_4:+65298565 | None:intergenic |
GTTCCATCTGGAAACTCCAC+TGG | 0.529470 | 5_4:-65304437 | Msa0864760:CDS |
ATACTCTTAATACTTGCTCA+AGG | 0.530745 | 5_4:-65298909 | Msa0864760:CDS |
TTTGATGAAGCACTGCGAAT+GGG | 0.531009 | 5_4:-65299824 | Msa0864760:CDS |
CGTGAAAGCCTTTCTCAGAA+TGG | 0.532502 | 5_4:+65304935 | None:intergenic |
ATTGCTGGCAACAACGATTG+AGG | 0.533107 | 5_4:+65297652 | None:intergenic |
GAGACAAATGCAAATCTACA+TGG | 0.533263 | 5_4:+65297569 | None:intergenic |
GATCGATTAAGAGTTTCTGC+TGG | 0.537846 | 5_4:-65297457 | Msa0864760:CDS |
ATGACATCTTCGAATTTGGA+TGG | 0.538913 | 5_4:+65297496 | None:intergenic |
AGGTAGGACCATTCTGAGAA+AGG | 0.539368 | 5_4:-65304943 | Msa0864760:five_prime_UTR |
GAGTATTGCTCATTCCACTT+TGG | 0.539677 | 5_4:+65298264 | None:intergenic |
AATATGGCTCGAAATGGGTT+CGG | 0.540629 | 5_4:-65298314 | Msa0864760:CDS |
GTGTCTGATAATTGGGATTG+CGG | 0.545267 | 5_4:-65297332 | Msa0864760:CDS |
TCACCGACATTACAGTTATG+TGG | 0.549326 | 5_4:+65299534 | None:intergenic |
CATTGCTGCATGTAAGGCTG+GGG | 0.550029 | 5_4:-65301973 | Msa0864760:CDS |
TATCATAGCATGATCAATCT+GGG | 0.550616 | 5_4:+65302928 | None:intergenic |
TCAACAACCTCATTTCTCAA+TGG | 0.554179 | 5_4:+65297859 | None:intergenic |
GGAGCAAACGATACAAGGAT+AGG | 0.557844 | 5_4:-65298159 | Msa0864760:CDS |
AGCGGATTGTCGAAATGTTG+TGG | 0.559835 | 5_4:+65297958 | None:intergenic |
AAAGGTGTATATCTAGGAAA+CGG | 0.559992 | 5_4:-65303025 | Msa0864760:CDS |
TCAATCTGGGACTGCAGTGT+TGG | 0.560963 | 5_4:+65302941 | None:intergenic |
GGGTGAGTTTGCCGCTACAA+TGG | 0.561559 | 5_4:-65297416 | Msa0864760:CDS |
AAAATGTCAGAGCTTTCAGA+TGG | 0.567059 | 5_4:+65298808 | None:intergenic |
AGGCTGTTGAGTTACGGGAT+GGG | 0.576344 | 5_4:-65303051 | Msa0864760:CDS |
AGATATTACGATGAAGAGAA+CGG | 0.576440 | 5_4:+65304672 | None:intergenic |
GAGCAAACGATACAAGGATA+GGG | 0.582060 | 5_4:-65298158 | Msa0864760:CDS |
GGAAAAGGTGAACGAAACAT+TGG | 0.582470 | 5_4:+65297250 | None:intergenic |
GAAGGTTGAAGTTGAACAAG+AGG | 0.584388 | 5_4:+65298078 | None:intergenic |
GATGAAGAGAACGGGGTCGG+AGG | 0.585100 | 5_4:+65304681 | None:intergenic |
ATAAGCGGTGGAAAACATGC+TGG | 0.585973 | 5_4:-65301755 | Msa0864760:CDS |
ATGCCAGTGGAGTTTCCAGA+TGG | 0.588263 | 5_4:+65304434 | None:intergenic |
TTTATCAAGATATTCTTGAA+CGG | 0.588908 | 5_4:+65304759 | None:intergenic |
GAACATTGACAAGGCACAAG+AGG | 0.589889 | 5_4:-65298639 | Msa0864760:CDS |
CCCATTCTGTAAGACATCCA+TGG | 0.592109 | 5_4:+65298546 | None:intergenic |
GAGGCTGTTGAGTTACGGGA+TGG | 0.592923 | 5_4:-65303052 | Msa0864760:CDS |
CTTCTGGGCTGAAGAAGATG+GGG | 0.597724 | 5_4:-65298059 | Msa0864760:CDS |
TACGATGAAGAGAACGGGGT+CGG | 0.599870 | 5_4:+65304678 | None:intergenic |
TACTCTTAATACTTGCTCAA+GGG | 0.604722 | 5_4:-65298908 | Msa0864760:CDS |
CCCAGCCTTACATGCAGCAA+TGG | 0.606579 | 5_4:+65301974 | None:intergenic |
TCAGCGATGTGCTTGTAGAG+TGG | 0.606837 | 5_4:+65301827 | None:intergenic |
TTTAGCTACACAATAGGCAT+CGG | 0.614152 | 5_4:+65298335 | None:intergenic |
AAGCAGGAACAGGAAGCACT+GGG | 0.619719 | 5_4:+65301786 | None:intergenic |
GGGATCTGGAGACCAAACAT+TGG | 0.619848 | 5_4:-65298419 | Msa0864760:CDS |
GAGTTACGGGATGGGGACAA+AGG | 0.621649 | 5_4:-65303043 | Msa0864760:CDS |
CTTCCAGCGATGAAACCTCA+TGG | 0.622033 | 5_4:-65298363 | Msa0864760:CDS |
GAATACGACGACGTTTAACA+AGG | 0.623272 | 5_4:-65304963 | None:intergenic |
CCGCTTATAACAGTAAAAGC+AGG | 0.623476 | 5_4:+65301770 | None:intergenic |
AGTCTAAGACACCAAACCCT+AGG | 0.623518 | 5_4:+65298874 | None:intergenic |
ACAAACACTATTACAAGACC+CGG | 0.625166 | 5_4:-65298584 | Msa0864760:CDS |
AGGCAAATTCTTGATAGTAG+AGG | 0.625871 | 5_4:-65304515 | Msa0864760:CDS |
TGAACCGCCATTGAGAAATG+AGG | 0.626400 | 5_4:-65297866 | Msa0864760:CDS |
AAGGGTATACATCATGCCTA+GGG | 0.630150 | 5_4:-65298890 | Msa0864760:CDS |
CTGCAGTTTCTCCATTGTAG+CGG | 0.630937 | 5_4:+65297405 | None:intergenic |
ACAACCTCATTTCTCAATGG+CGG | 0.631163 | 5_4:+65297862 | None:intergenic |
TGGAAGAGTTGTAACACAGA+TGG | 0.631751 | 5_4:-65297437 | Msa0864760:CDS |
CACGCGCTCGGAGATGAGAG+TGG | 0.636109 | 5_4:+65304821 | None:intergenic |
GGAGCGTCGTATTGTAACCA+TGG | 0.638962 | 5_4:-65298563 | Msa0864760:CDS |
GGAAGAGTTGTAACACAGAT+GGG | 0.640126 | 5_4:-65297436 | Msa0864760:CDS |
ATTAACATCTTACATGCCAG+TGG | 0.640506 | 5_4:+65304421 | None:intergenic |
AACAAACTATCGAGCTTGTG+CGG | 0.640576 | 5_4:-65297906 | Msa0864760:CDS |
TATAAATGAGAAAATATCTG+AGG | 0.641810 | 5_4:-65302981 | Msa0864760:CDS |
TAGGCATCGGTGCGACCATG+AGG | 0.643922 | 5_4:+65298348 | None:intergenic |
TGATGAAATGAATGAGGTCA+AGG | 0.644784 | 5_4:+65304844 | None:intergenic |
AGACAAATGCAAATCTACAT+GGG | 0.645035 | 5_4:+65297570 | None:intergenic |
AAATGTCAGAGCTTTCAGAT+GGG | 0.650957 | 5_4:+65298809 | None:intergenic |
AAACGATACAAGGATAGGGA+AGG | 0.655773 | 5_4:-65298154 | Msa0864760:CDS |
TATAACTGAGCTGGAGACAG+CGG | 0.659067 | 5_4:+65297940 | None:intergenic |
ACAAAGACAAGATATCGGAA+AGG | 0.665479 | 5_4:+65297298 | None:intergenic |
GAGTGGTGATGAAATGAATG+AGG | 0.671810 | 5_4:+65304838 | None:intergenic |
ACGACGACGTTTAACAAGGT+AGG | 0.672274 | 5_4:-65304959 | Msa0864760:five_prime_UTR |
TGATTACGAAAGTAAAAGCG+AGG | 0.674184 | 5_4:-65304535 | Msa0864760:CDS |
TGGAGAAAGACTATTAACAA+CGG | 0.677970 | 5_4:+65298284 | None:intergenic |
TAGATTCACGTGAAATCGTG+TGG | 0.685130 | 5_4:-65297828 | Msa0864760:CDS |
TTCTGGGCTGAAGAAGATGG+GGG | 0.690562 | 5_4:-65298058 | Msa0864760:CDS |
GGGCCACATAACTGTAATGT+CGG | 0.693032 | 5_4:-65299537 | Msa0864760:CDS |
TGGAGCAAGGAACATTGACA+AGG | 0.710727 | 5_4:-65298648 | Msa0864760:intron |
ATATTACGATGAAGAGAACG+GGG | 0.743082 | 5_4:+65304674 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTATCAGTTTTTTAATATA+AGG | + | chr5_4:65300697-65300716 | None:intergenic | 10.0% |
!!! | TCATATATATTTTTTAAAAG+AGG | - | chr5_4:65300740-65300759 | Msa0864760:intron | 10.0% |
!!! | GTTTTATCAAAAAAATTATA+TGG | - | chr5_4:65300910-65300929 | Msa0864760:intron | 10.0% |
!! | TACGAAAAAAAATAAATTAA+CGG | + | chr5_4:65301543-65301562 | None:intergenic | 10.0% |
!!! | TTTTAAATGAATATATGAAA+TGG | - | chr5_4:65302729-65302748 | Msa0864760:intron | 10.0% |
!! | AGAAAATTACTAATAAAAGA+GGG | - | chr5_4:65298363-65298382 | Msa0864760:CDS | 15.0% |
!!! | TTGTTCTTTGAAAATTAATT+TGG | - | chr5_4:65298572-65298591 | Msa0864760:CDS | 15.0% |
!! | TTATTGATCAATTATAGAAT+TGG | - | chr5_4:65299040-65299059 | Msa0864760:intron | 15.0% |
!! | GATAAATGTTATAGTAAAAT+TGG | + | chr5_4:65299647-65299666 | None:intergenic | 15.0% |
!! | ACATTTATCAATAATAAAGT+TGG | - | chr5_4:65299658-65299677 | Msa0864760:intron | 15.0% |
!! | CATTTATCAATAATAAAGTT+GGG | - | chr5_4:65299659-65299678 | Msa0864760:intron | 15.0% |
!!! | TTTTCATTTAAAGTTTAATC+TGG | - | chr5_4:65300246-65300265 | Msa0864760:intron | 15.0% |
!! | TCTAAAAACAAAAAATTATC+AGG | - | chr5_4:65300304-65300323 | Msa0864760:intron | 15.0% |
!!! | ATTTTTAAATTATTTTCACG+TGG | - | chr5_4:65300858-65300877 | Msa0864760:intron | 15.0% |
!! | AAACTAATTATAAAACAACT+CGG | - | chr5_4:65301341-65301360 | Msa0864760:intron | 15.0% |
!!! | AATTATAAAAAACTGTTTTG+AGG | - | chr5_4:65301875-65301894 | Msa0864760:intron | 15.0% |
!! | AAAACAAAAACTGAAAAAAT+AGG | + | chr5_4:65302416-65302435 | None:intergenic | 15.0% |
!!! | ATCAAATATTGTTTTTAATG+TGG | - | chr5_4:65303488-65303507 | Msa0864760:intron | 15.0% |
!! | TTTATCAAGATATTCTTGAA+CGG | + | chr5_4:65297400-65297419 | None:intergenic | 20.0% |
!!! | TGATTTGTGAAATTAATCTT+AGG | - | chr5_4:65297902-65297921 | Msa0864760:CDS | 20.0% |
!!! | AAATTGATTTTAGTTAGAAG+TGG | - | chr5_4:65298022-65298041 | Msa0864760:CDS | 20.0% |
!!! | AATTGATTTTAGTTAGAAGT+GGG | - | chr5_4:65298023-65298042 | Msa0864760:CDS | 20.0% |
!! | ACTAATATAATAGACACTTA+TGG | + | chr5_4:65298268-65298287 | None:intergenic | 20.0% |
!!! | GTCTATTATATTAGTCATTT+TGG | - | chr5_4:65298273-65298292 | Msa0864760:CDS | 20.0% |
!! | CAGAAAATTACTAATAAAAG+AGG | - | chr5_4:65298362-65298381 | Msa0864760:CDS | 20.0% |
!! | TATAAATGAGAAAATATCTG+AGG | - | chr5_4:65299175-65299194 | Msa0864760:intron | 20.0% |
!!! | CAAATAACCAAATTTTTTGT+GGG | + | chr5_4:65300985-65301004 | None:intergenic | 20.0% |
!! | AACTAATTATAAAACAACTC+GGG | - | chr5_4:65301342-65301361 | Msa0864760:intron | 20.0% |
!!! | ATATATACTGTTTTTACTGT+TGG | - | chr5_4:65301462-65301481 | Msa0864760:intron | 20.0% |
!! | AGGTTATTTGGAAAAAAAAT+TGG | + | chr5_4:65301748-65301767 | None:intergenic | 20.0% |
!! | AAGATAATAATGAGGTTATT+TGG | + | chr5_4:65301760-65301779 | None:intergenic | 20.0% |
!! | AACATAATCAATTTCAACAA+CGG | + | chr5_4:65302159-65302178 | None:intergenic | 20.0% |
!!! | ATAAATCTGTTTTAGAAGAA+AGG | - | chr5_4:65302754-65302773 | Msa0864760:intron | 20.0% |
!! | NTTAAGAAGCAAAATACAAA+CGG | + | chr5_4:65302958-65302977 | None:intergenic | 20.0% |
!! | AAAAACAATATTTGATCAAG+TGG | + | chr5_4:65303484-65303503 | None:intergenic | 20.0% |
!! | AGGATAAGAATAATTGTAAA+CGG | + | chr5_4:65304061-65304080 | None:intergenic | 20.0% |
!! | TATACAAATTAGCTATAGAA+GGG | + | chr5_4:65304152-65304171 | None:intergenic | 20.0% |
!! | TTATACAAATTAGCTATAGA+AGG | + | chr5_4:65304153-65304172 | None:intergenic | 20.0% |
!!! | TTTGGTTTCTTTATTTTCTA+AGG | - | chr5_4:65304880-65304899 | Msa0864760:five_prime_UTR | 20.0% |
!!! | TCTAATCCATTTTCATAAAA+TGG | + | chr5_4:65304933-65304952 | None:intergenic | 20.0% |
!!! | TTTTATGAAAATGGATTAGA+AGG | - | chr5_4:65304933-65304952 | Msa0864760:five_prime_UTR | 20.0% |
!! | TATGAAAAAAGGAGTACAAT+CGG | - | chr5_4:65297598-65297617 | Msa0864760:CDS | 25.0% |
!! | ATGTTGATTATGTGCATATT+TGG | - | chr5_4:65297861-65297880 | Msa0864760:CDS | 25.0% |
! | TTTGTGAAATTAATCTTAGG+CGG | - | chr5_4:65297905-65297924 | Msa0864760:CDS | 25.0% |
!!! | ATATTAGTCATTTTGGTCAT+TGG | - | chr5_4:65298280-65298299 | Msa0864760:CDS | 25.0% |
!! | TTTTCGAATGTATTTTTCGT+TGG | - | chr5_4:65298328-65298347 | Msa0864760:CDS | 25.0% |
! | TTTGCGATTTCAATACATTT+AGG | - | chr5_4:65298398-65298417 | Msa0864760:CDS | 25.0% |
! | TTGCGATTTCAATACATTTA+GGG | - | chr5_4:65298399-65298418 | Msa0864760:CDS | 25.0% |
!!! | ACAATTATTTTTGTCCATGA+AGG | + | chr5_4:65298440-65298459 | None:intergenic | 25.0% |
! | TGACATAATGATACACAATA+TGG | + | chr5_4:65299330-65299349 | None:intergenic | 25.0% |
!!! | ATGTCACATTTTAAGACAAT+TGG | - | chr5_4:65299361-65299380 | Msa0864760:intron | 25.0% |
! | ATAAGTAAGTAACTCAGTTA+GGG | - | chr5_4:65299702-65299721 | Msa0864760:intron | 25.0% |
! | TATTCTCTTCTTTCATAACA+AGG | - | chr5_4:65299757-65299776 | Msa0864760:intron | 25.0% |
! | AGGTTAGTATGAGAATATTA+TGG | - | chr5_4:65299789-65299808 | Msa0864760:intron | 25.0% |
! | GTTCAAAACGGATATTATAA+AGG | - | chr5_4:65299830-65299849 | Msa0864760:CDS | 25.0% |
! | TATCTGTTCATAACATATGT+AGG | + | chr5_4:65300015-65300034 | None:intergenic | 25.0% |
! | ATTATTTCCTATAGACACTT+AGG | - | chr5_4:65300504-65300523 | Msa0864760:intron | 25.0% |
! | TTATTTCCTATAGACACTTA+GGG | - | chr5_4:65300505-65300524 | Msa0864760:intron | 25.0% |
!!! | ACTAGTCTTTTGTTGTTATT+CGG | - | chr5_4:65300958-65300977 | Msa0864760:intron | 25.0% |
!!! | CCAAATAACCAAATTTTTTG+TGG | + | chr5_4:65300986-65301005 | None:intergenic | 25.0% |
! | CCACAAAAAATTTGGTTATT+TGG | - | chr5_4:65300983-65301002 | Msa0864760:intron | 25.0% |
! | TAAATATTTCCGCATTCAAT+GGG | + | chr5_4:65301313-65301332 | None:intergenic | 25.0% |
! | ATAAATATTTCCGCATTCAA+TGG | + | chr5_4:65301314-65301333 | None:intergenic | 25.0% |
! | ACTAATTATAAAACAACTCG+GGG | - | chr5_4:65301343-65301362 | Msa0864760:intron | 25.0% |
!!! | AGTTCTTTGTTGTTTAACAT+TGG | - | chr5_4:65301399-65301418 | Msa0864760:intron | 25.0% |
! | GTTGTAATACTTGAAGATAT+AGG | - | chr5_4:65301826-65301845 | Msa0864760:CDS | 25.0% |
! | GCTTTCTTCATTATTGTTAT+AGG | - | chr5_4:65302277-65302296 | Msa0864760:intron | 25.0% |
! | AATCACCTTTAAATGATGAT+AGG | + | chr5_4:65302366-65302385 | None:intergenic | 25.0% |
! | AACTGAAAAAATAGGATAGT+GGG | + | chr5_4:65302408-65302427 | None:intergenic | 25.0% |
! | AAACTGAAAAAATAGGATAG+TGG | + | chr5_4:65302409-65302428 | None:intergenic | 25.0% |
!!! | TATTTGTTGTTCATGACAAA+AGG | - | chr5_4:65302571-65302590 | Msa0864760:intron | 25.0% |
!!! | ATTTGTTGTTCATGACAAAA+GGG | - | chr5_4:65302572-65302591 | Msa0864760:intron | 25.0% |
! | CTGTTATTACAGAAAAATGT+GGG | - | chr5_4:65302599-65302618 | Msa0864760:intron | 25.0% |
! | AGAAAAAATATCTCCAAAAC+TGG | - | chr5_4:65302779-65302798 | Msa0864760:intron | 25.0% |
!! | AATACTGTATAAACCAGTTT+TGG | + | chr5_4:65302795-65302814 | None:intergenic | 25.0% |
! | ATTAGAGTCAACAATTAAGT+TGG | - | chr5_4:65302828-65302847 | Msa0864760:intron | 25.0% |
! | TGTTGGAAATATAAGATCTA+TGG | - | chr5_4:65302894-65302913 | Msa0864760:intron | 25.0% |
! | TTAAGAAGCAAAATACAAAC+GGG | + | chr5_4:65302957-65302976 | None:intergenic | 25.0% |
! | CAATTAGATAATGTGCTAAT+TGG | - | chr5_4:65303216-65303235 | Msa0864760:intron | 25.0% |
!!! | ACTTGATTTTATTCAAGTTG+AGG | - | chr5_4:65303302-65303321 | Msa0864760:intron | 25.0% |
!!! | CTTGATTTTATTCAAGTTGA+GGG | - | chr5_4:65303303-65303322 | Msa0864760:intron | 25.0% |
!!! | ATCTCTTTTTCATTCCATAT+TGG | + | chr5_4:65303441-65303460 | None:intergenic | 25.0% |
! | GAAATAACGAAAAATGTAGA+TGG | + | chr5_4:65303934-65303953 | None:intergenic | 25.0% |
!! | TTTTCATAAAATGGAGGAAA+AGG | + | chr5_4:65304924-65304943 | None:intergenic | 25.0% |
!! | TTTCCTCCATTTTATGAAAA+TGG | - | chr5_4:65304924-65304943 | Msa0864760:five_prime_UTR | 25.0% |
!! | AATCCATTTTCATAAAATGG+AGG | + | chr5_4:65304930-65304949 | None:intergenic | 25.0% |
AGATATTACGATGAAGAGAA+CGG | + | chr5_4:65297487-65297506 | None:intergenic | 30.0% | |
CAGTCGAATCATATGAAAAA+AGG | - | chr5_4:65297587-65297606 | Msa0864760:CDS | 30.0% | |
TACAAATCAACTTCAACAGT+TGG | + | chr5_4:65297671-65297690 | None:intergenic | 30.0% | |
TTGTGAAATTAATCTTAGGC+GGG | - | chr5_4:65297906-65297925 | Msa0864760:CDS | 30.0% | |
! | TTTTGATACTTTAATGTGCG+AGG | - | chr5_4:65297935-65297954 | Msa0864760:CDS | 30.0% |
! | AGTGTAAAATGGTTTAGGTT+TGG | - | chr5_4:65298048-65298067 | Msa0864760:CDS | 30.0% |
AACTTGAAGCTAGAATTTGT+AGG | + | chr5_4:65298139-65298158 | None:intergenic | 30.0% | |
! | ATGGATGTGTTTTCAATGTT+AGG | + | chr5_4:65298249-65298268 | None:intergenic | 30.0% |
!! | TGGTCATTGGATCTATTTTT+AGG | - | chr5_4:65298293-65298312 | Msa0864760:CDS | 30.0% |
ATTACTAATAAAAGAGGGAC+TGG | - | chr5_4:65298368-65298387 | Msa0864760:CDS | 30.0% | |
TTACTAATAAAAGAGGGACT+GGG | - | chr5_4:65298369-65298388 | Msa0864760:CDS | 30.0% | |
GTCTGCTTAATTGTGTATAT+TGG | - | chr5_4:65298458-65298477 | Msa0864760:intron | 30.0% | |
!! | TGCAAAGTTTTGTCAAATAG+AGG | - | chr5_4:65298595-65298614 | Msa0864760:CDS | 30.0% |
ATAAGAGAATCACCTAAACA+GGG | + | chr5_4:65298961-65298980 | None:intergenic | 30.0% | |
AATAAGAGAATCACCTAAAC+AGG | + | chr5_4:65298962-65298981 | None:intergenic | 30.0% | |
TGTTTAGGTGATTCTCTTAT+TGG | - | chr5_4:65298961-65298980 | Msa0864760:CDS | 30.0% | |
GTTTAGGTGATTCTCTTATT+GGG | - | chr5_4:65298962-65298981 | Msa0864760:CDS | 30.0% | |
! | TTGGATTAACATTGACTGTT+CGG | - | chr5_4:65299059-65299078 | Msa0864760:intron | 30.0% |
! | AAAGGTGTATATCTAGGAAA+CGG | - | chr5_4:65299131-65299150 | Msa0864760:intron | 30.0% |
TATCATAGCATGATCAATCT+GGG | + | chr5_4:65299231-65299250 | None:intergenic | 30.0% | |
TATTTCAACATCTTTCTGCT+GGG | - | chr5_4:65299276-65299295 | Msa0864760:intron | 30.0% | |
AGCATTCTTTAGTATAGTGA+TGG | - | chr5_4:65299478-65299497 | Msa0864760:intron | 30.0% | |
GCATTCTTTAGTATAGTGAT+GGG | - | chr5_4:65299479-65299498 | Msa0864760:intron | 30.0% | |
CATAAGTAAGTAACTCAGTT+AGG | - | chr5_4:65299701-65299720 | Msa0864760:intron | 30.0% | |
!! | GAAAAGTGTTGTGTTCAAAA+CGG | - | chr5_4:65299818-65299837 | Msa0864760:CDS | 30.0% |
! | CAAGCAATCACTTGATATTT+TGG | + | chr5_4:65299933-65299952 | None:intergenic | 30.0% |
!! | TGTTTCTGATTTTTGTTTGC+AGG | - | chr5_4:65300126-65300145 | Msa0864760:intron | 30.0% |
!! | GTTTCTGATTTTTGTTTGCA+GGG | - | chr5_4:65300127-65300146 | Msa0864760:intron | 30.0% |
!! | TTTCTGATTTTTGTTTGCAG+GGG | - | chr5_4:65300128-65300147 | Msa0864760:intron | 30.0% |
AAAACATGCTGGAAATAATC+TGG | - | chr5_4:65300412-65300431 | Msa0864760:intron | 30.0% | |
AAGAGAAAAAGAGAGAATAG+AGG | - | chr5_4:65300634-65300653 | Msa0864760:intron | 30.0% | |
AGCTATGTTACTGTAAAGTA+AGG | - | chr5_4:65301030-65301049 | Msa0864760:intron | 30.0% | |
ATGTTACTGTAAAGTAAGGA+AGG | - | chr5_4:65301034-65301053 | Msa0864760:intron | 30.0% | |
TGTTACTGTAAAGTAAGGAA+GGG | - | chr5_4:65301035-65301054 | Msa0864760:intron | 30.0% | |
!!! | TGAGATGCTGTTGTTATTTT+GGG | + | chr5_4:65301076-65301095 | None:intergenic | 30.0% |
TCAATATTCTTTCTCTCCAA+AGG | + | chr5_4:65301111-65301130 | None:intergenic | 30.0% | |
GCGATAGATTAAAAAACAGT+GGG | + | chr5_4:65301141-65301160 | None:intergenic | 30.0% | |
AAATTGCTCATAACTCCAAA+GGG | + | chr5_4:65301263-65301282 | None:intergenic | 30.0% | |
AAAATTGCTCATAACTCCAA+AGG | + | chr5_4:65301264-65301283 | None:intergenic | 30.0% | |
! | TGTTGTTTAACATTGGAAGT+TGG | - | chr5_4:65301406-65301425 | Msa0864760:intron | 30.0% |
AGGTGGAAAAGATAATAATG+AGG | + | chr5_4:65301768-65301787 | None:intergenic | 30.0% | |
CAAAATCCAATGCAAATTCA+AGG | + | chr5_4:65301807-65301826 | None:intergenic | 30.0% | |
ATGAAATTGTTGAGTTAGTG+TGG | + | chr5_4:65301911-65301930 | None:intergenic | 30.0% | |
AACAATTTCATGCTAGACAT+GGG | - | chr5_4:65301920-65301939 | Msa0864760:intron | 30.0% | |
!!! | TCTCCCTTTTTGGTTTTTAT+CGG | + | chr5_4:65302010-65302029 | None:intergenic | 30.0% |
ATAAAAACCAAAAAGGGAGA+TGG | - | chr5_4:65302010-65302029 | Msa0864760:CDS | 30.0% | |
TACTGTTATCCTACAAAAAC+TGG | + | chr5_4:65302095-65302114 | None:intergenic | 30.0% | |
GGATAACAGTAAAAACAGTA+TGG | - | chr5_4:65302104-65302123 | Msa0864760:intron | 30.0% | |
AACAGTAAAAACAGTATGGA+TGG | - | chr5_4:65302108-65302127 | Msa0864760:intron | 30.0% | |
GAAATCATGATTCTTCCAAT+TGG | - | chr5_4:65302299-65302318 | Msa0864760:intron | 30.0% | |
TGAGACCTATCATCATTTAA+AGG | - | chr5_4:65302358-65302377 | Msa0864760:intron | 30.0% | |
ACTGAAAAAATAGGATAGTG+GGG | + | chr5_4:65302407-65302426 | None:intergenic | 30.0% | |
! | ACTTGATAATATTCGAGCAT+GGG | + | chr5_4:65302477-65302496 | None:intergenic | 30.0% |
! | AACTTGATAATATTCGAGCA+TGG | + | chr5_4:65302478-65302497 | None:intergenic | 30.0% |
CAGCTCTATTACAATGATTA+AGG | - | chr5_4:65302516-65302535 | Msa0864760:intron | 30.0% | |
AGCTTAAACAACATATCTCA+GGG | + | chr5_4:65302543-65302562 | None:intergenic | 30.0% | |
GCTGTTATTACAGAAAAATG+TGG | - | chr5_4:65302598-65302617 | Msa0864760:intron | 30.0% | |
! | TTTAAGATAAAAAGCTTGCC+TGG | + | chr5_4:65302674-65302693 | None:intergenic | 30.0% |
!! | TCTTTTACTCTCTGATTTGT+TGG | - | chr5_4:65302877-65302896 | Msa0864760:intron | 30.0% |
! | TTATGATGTGTTTGTTGGAT+AGG | - | chr5_4:65303153-65303172 | Msa0864760:intron | 30.0% |
TTGAGCAAGTATTAAGAGTA+TGG | + | chr5_4:65303248-65303267 | None:intergenic | 30.0% | |
ATACTCTTAATACTTGCTCA+AGG | - | chr5_4:65303247-65303266 | Msa0864760:intron | 30.0% | |
TACTCTTAATACTTGCTCAA+GGG | - | chr5_4:65303248-65303267 | Msa0864760:intron | 30.0% | |
!!! | ATTTTCATCACTGCTACTTT+TGG | - | chr5_4:65303366-65303385 | Msa0864760:intron | 30.0% |
!!! | TTTTCATCACTGCTACTTTT+GGG | - | chr5_4:65303367-65303386 | Msa0864760:intron | 30.0% |
! | GCAATAATGGAAATCCAATA+TGG | - | chr5_4:65303424-65303443 | Msa0864760:intron | 30.0% |
! | AAAGAGATTTTTCTTTGCTG+TGG | - | chr5_4:65303453-65303472 | Msa0864760:intron | 30.0% |
!!! | ATTGTTTTTAATGTGGAGCA+AGG | - | chr5_4:65303495-65303514 | Msa0864760:intron | 30.0% |
!!! | AAACATTGGAGTTTTGAGAT+GGG | - | chr5_4:65303751-65303770 | Msa0864760:intron | 30.0% |
TGGAGAAAGACTATTAACAA+CGG | + | chr5_4:65303875-65303894 | None:intergenic | 30.0% | |
TTAATAGTCTTTCTCCAAAG+TGG | - | chr5_4:65303878-65303897 | Msa0864760:intron | 30.0% | |
! | GAGAATTAGTCTATCAGAAA+TGG | - | chr5_4:65304026-65304045 | Msa0864760:intron | 30.0% |
! | AAATGTTGTGGAAAAAGCAT+TGG | + | chr5_4:65304189-65304208 | None:intergenic | 30.0% |
TAACGTCTTTCTAAATTGCT+TGG | - | chr5_4:65304386-65304405 | Msa0864760:intron | 30.0% | |
ATAAGAGCAAGAAATATTGC+TGG | + | chr5_4:65304522-65304541 | None:intergenic | 30.0% | |
AGACAAATGCAAATCTACAT+GGG | + | chr5_4:65304589-65304608 | None:intergenic | 30.0% | |
TACAGCAAGTATAGATGAAT+TGG | - | chr5_4:65304617-65304636 | Msa0864760:intron | 30.0% | |
CAAAATGACATCTTCGAATT+TGG | + | chr5_4:65304667-65304686 | None:intergenic | 30.0% | |
ATGATTTCGTGTCTGATAAT+TGG | - | chr5_4:65304816-65304835 | Msa0864760:five_prime_UTR | 30.0% | |
TGATTTCGTGTCTGATAATT+GGG | - | chr5_4:65304817-65304836 | Msa0864760:five_prime_UTR | 30.0% | |
ACCAAACAAAGACAAGATAT+CGG | + | chr5_4:65304866-65304885 | None:intergenic | 30.0% | |
TGATGAAATGAATGAGGTCA+AGG | + | chr5_4:65297315-65297334 | None:intergenic | 35.0% | |
! | CATTTCTACGATCGATTCTT+CGG | + | chr5_4:65297376-65297395 | None:intergenic | 35.0% |
ATATTACGATGAAGAGAACG+GGG | + | chr5_4:65297485-65297504 | None:intergenic | 35.0% | |
GATATTACGATGAAGAGAAC+GGG | + | chr5_4:65297486-65297505 | None:intergenic | 35.0% | |
TGATTACGAAAGTAAAAGCG+AGG | - | chr5_4:65297621-65297640 | Msa0864760:CDS | 35.0% | |
! | AGGCAAATTCTTGATAGTAG+AGG | - | chr5_4:65297641-65297660 | Msa0864760:CDS | 35.0% |
ATTAACATCTTACATGCCAG+TGG | + | chr5_4:65297738-65297757 | None:intergenic | 35.0% | |
CCTCACACATTCAATTACTA+CGG | + | chr5_4:65297822-65297841 | None:intergenic | 35.0% | |
TCAATGTTAGGTTTCACATC+TGG | + | chr5_4:65298237-65298256 | None:intergenic | 35.0% | |
TACTAATAAAAGAGGGACTG+GGG | - | chr5_4:65298370-65298389 | Msa0864760:CDS | 35.0% | |
ACATCAGTCTTCTTAAATCG+TGG | - | chr5_4:65298515-65298534 | Msa0864760:intron | 35.0% | |
CATTCTGATGCAATTTCACT+TGG | - | chr5_4:65298739-65298758 | Msa0864760:intron | 35.0% | |
TAGATATAGCTAGCCAAACA+AGG | + | chr5_4:65298863-65298882 | None:intergenic | 35.0% | |
! | TGTTTGGCTAGCTATATCTA+AGG | - | chr5_4:65298863-65298882 | Msa0864760:CDS | 35.0% |
! | TGGATTAACATTGACTGTTC+GGG | - | chr5_4:65299060-65299079 | Msa0864760:intron | 35.0% |
! | GATGATTCATTTCAGGTATG+AGG | - | chr5_4:65299085-65299104 | Msa0864760:intron | 35.0% |
CTATCATAGCATGATCAATC+TGG | + | chr5_4:65299232-65299251 | None:intergenic | 35.0% | |
! | CCTTTTTCTCTGTTTTGTCA+AGG | + | chr5_4:65299256-65299275 | None:intergenic | 35.0% |
CCTTGACAAAACAGAGAAAA+AGG | - | chr5_4:65299253-65299272 | Msa0864760:intron | 35.0% | |
GTATTTCAACATCTTTCTGC+TGG | - | chr5_4:65299275-65299294 | Msa0864760:intron | 35.0% | |
!!! | TCAAGCTTTTTTTCCCTACT+CGG | + | chr5_4:65299390-65299409 | None:intergenic | 35.0% |
TTTCATTTCCTTTCCTGCAA+CGG | + | chr5_4:65299539-65299558 | None:intergenic | 35.0% | |
!!! | AGCACACTTTTGTTTTGTAG+TGG | - | chr5_4:65299601-65299620 | Msa0864760:intron | 35.0% |
!!! | GCACACTTTTGTTTTGTAGT+GGG | - | chr5_4:65299602-65299621 | Msa0864760:intron | 35.0% |
AATAAAGTTGGGACAGTGTT+TGG | - | chr5_4:65299670-65299689 | Msa0864760:intron | 35.0% | |
TCATAACAAGGTGCATACTT+AGG | - | chr5_4:65299769-65299788 | Msa0864760:intron | 35.0% | |
GTCTTTCTTCCGTTTATATC+CGG | - | chr5_4:65299952-65299971 | Msa0864760:intron | 35.0% | |
TCAAACATGCAAGTCATTGT+AGG | + | chr5_4:65300038-65300057 | None:intergenic | 35.0% | |
!! | TTCTGATTTTTGTTTGCAGG+GGG | - | chr5_4:65300129-65300148 | Msa0864760:intron | 35.0% |
ATAACAGTAAAAGCAGGAAC+AGG | + | chr5_4:65300383-65300402 | None:intergenic | 35.0% | |
!! | CCTGCTTTTACTGTTATAAG+CGG | - | chr5_4:65300386-65300405 | Msa0864760:intron | 35.0% |
TGGAAATAATCTGGCAATTG+AGG | - | chr5_4:65300421-65300440 | Msa0864760:intron | 35.0% | |
ATTCGGTCCCACAAAAAATT+TGG | - | chr5_4:65300975-65300994 | Msa0864760:intron | 35.0% | |
!!! | GTGAGATGCTGTTGTTATTT+TGG | + | chr5_4:65301077-65301096 | None:intergenic | 35.0% |
GAGAGAAAGAATATTGACGT+GGG | - | chr5_4:65301114-65301133 | Msa0864760:intron | 35.0% | |
GGCGATAGATTAAAAAACAG+TGG | + | chr5_4:65301142-65301161 | None:intergenic | 35.0% | |
GAATTTGAAGAGAGAGAGAA+AGG | + | chr5_4:65301209-65301228 | None:intergenic | 35.0% | |
AATTGCTCATAACTCCAAAG+GGG | + | chr5_4:65301262-65301281 | None:intergenic | 35.0% | |
AGTTAAATGCCCATTGAATG+CGG | - | chr5_4:65301301-65301320 | Msa0864760:intron | 35.0% | |
ACAAAGAACTGACTAGATGT+TGG | + | chr5_4:65301389-65301408 | None:intergenic | 35.0% | |
TAACATTGGAAGTTGGATTG+TGG | - | chr5_4:65301413-65301432 | Msa0864760:intron | 35.0% | |
GCCTATCATAATATAACACC+TGG | - | chr5_4:65301484-65301503 | Msa0864760:intron | 35.0% | |
! | GCCAGGTGTTATATTATGAT+AGG | + | chr5_4:65301488-65301507 | None:intergenic | 35.0% |
CTTCTATAGCGATTGTTGAA+GGG | + | chr5_4:65301568-65301587 | None:intergenic | 35.0% | |
AAAGTGGAAGTTGCATTGAA+CGG | + | chr5_4:65301610-65301629 | None:intergenic | 35.0% | |
!!! | TTCGCTTTTTCTTGAGAAAG+TGG | + | chr5_4:65301626-65301645 | None:intergenic | 35.0% |
TTCTCTTCTTACTGCAACAA+TGG | + | chr5_4:65301673-65301692 | None:intergenic | 35.0% | |
CGATCATTAACCATTGAGTT+TGG | + | chr5_4:65301700-65301719 | None:intergenic | 35.0% | |
CAACAATTTCATGCTAGACA+TGG | - | chr5_4:65301919-65301938 | Msa0864760:intron | 35.0% | |
GTTGAATGCTCTATGAAAAG+AGG | - | chr5_4:65301983-65302002 | Msa0864760:CDS | 35.0% | |
AGGTCCGATAAAAACCAAAA+AGG | - | chr5_4:65302003-65302022 | Msa0864760:CDS | 35.0% | |
GGTCCGATAAAAACCAAAAA+GGG | - | chr5_4:65302004-65302023 | Msa0864760:CDS | 35.0% | |
! | CTGAAAAAATAGGATAGTGG+GGG | + | chr5_4:65302406-65302425 | None:intergenic | 35.0% |
CAGCTTAAACAACATATCTC+AGG | + | chr5_4:65302544-65302563 | None:intergenic | 35.0% | |
!! | GAGTCAACAATTAAGTTGGT+TGG | - | chr5_4:65302832-65302851 | Msa0864760:intron | 35.0% |
! | ACCAAAATGGTTTGTACTAG+AGG | - | chr5_4:65303100-65303119 | Msa0864760:intron | 35.0% |
! | TCCTCTAGTACAAACCATTT+TGG | + | chr5_4:65303104-65303123 | None:intergenic | 35.0% |
ATAAACGAAAGAGACGATGT+AGG | - | chr5_4:65303123-65303142 | Msa0864760:intron | 35.0% | |
TAAACGAAAGAGACGATGTA+GGG | - | chr5_4:65303124-65303143 | Msa0864760:intron | 35.0% | |
AGAGCTTATGATGTGTTTGT+TGG | - | chr5_4:65303148-65303167 | Msa0864760:intron | 35.0% | |
AAATGTCAGAGCTTTCAGAT+GGG | + | chr5_4:65303350-65303369 | None:intergenic | 35.0% | |
AAAATGTCAGAGCTTTCAGA+TGG | + | chr5_4:65303351-65303370 | None:intergenic | 35.0% | |
AAGTTGGCGAAAAGCAATAA+TGG | - | chr5_4:65303411-65303430 | Msa0864760:intron | 35.0% | |
ACAAACACTATTACAAGACC+CGG | - | chr5_4:65303572-65303591 | Msa0864760:intron | 35.0% | |
!!! | CAGAATGGGAGATTTTTTGT+CGG | - | chr5_4:65303624-65303643 | Msa0864760:intron | 35.0% |
!! | ATATGTTTGATGACGATCCA+CGG | - | chr5_4:65303685-65303704 | Msa0864760:intron | 35.0% |
CATCTCAAAACTCCAATGTT+TGG | + | chr5_4:65303752-65303771 | None:intergenic | 35.0% | |
!!! | CAAACATTGGAGTTTTGAGA+TGG | - | chr5_4:65303750-65303769 | Msa0864760:intron | 35.0% |
!!! | AACATTGGAGTTTTGAGATG+GGG | - | chr5_4:65303752-65303771 | Msa0864760:intron | 35.0% |
TTTAGCTACACAATAGGCAT+CGG | + | chr5_4:65303824-65303843 | None:intergenic | 35.0% | |
GCCTATTGTGTAGCTAAATA+TGG | - | chr5_4:65303826-65303845 | Msa0864760:intron | 35.0% | |
GCCATATTTAGCTACACAAT+AGG | + | chr5_4:65303830-65303849 | None:intergenic | 35.0% | |
TAGCTAAATATGGCTCGAAA+TGG | - | chr5_4:65303836-65303855 | Msa0864760:intron | 35.0% | |
AGCTAAATATGGCTCGAAAT+GGG | - | chr5_4:65303837-65303856 | Msa0864760:intron | 35.0% | |
CATGAAGAATATATAGCTGC+TGG | - | chr5_4:65303976-65303995 | Msa0864760:intron | 35.0% | |
TTGTTCAACTTCAACCTTCT+GGG | - | chr5_4:65304082-65304101 | Msa0864760:intron | 35.0% | |
CTTAATTCGTATAACTGAGC+TGG | + | chr5_4:65304228-65304247 | None:intergenic | 35.0% | |
CAGCTCAGTTATACGAATTA+AGG | - | chr5_4:65304226-65304245 | Msa0864760:intron | 35.0% | |
TCAACAACCTCATTTCTCAA+TGG | + | chr5_4:65304300-65304319 | None:intergenic | 35.0% | |
!! | GATGTAAAGCTGATTTTGAG+AGG | - | chr5_4:65304361-65304380 | Msa0864760:intron | 35.0% |
GTCTTTCTAAATTGCTTGGT+TGG | - | chr5_4:65304390-65304409 | Msa0864760:intron | 35.0% | |
AGCAACAAGTGAGCTATAAT+TGG | + | chr5_4:65304465-65304484 | None:intergenic | 35.0% | |
! | TTTGAAATTGCAGCAGCATA+TGG | + | chr5_4:65304548-65304567 | None:intergenic | 35.0% |
! | TCTACATGGGATAGTGTTTT+TGG | + | chr5_4:65304576-65304595 | None:intergenic | 35.0% |
GAGACAAATGCAAATCTACA+TGG | + | chr5_4:65304590-65304609 | None:intergenic | 35.0% | |
ATGACATCTTCGAATTTGGA+TGG | + | chr5_4:65304663-65304682 | None:intergenic | 35.0% | |
ACAAAGACAAGATATCGGAA+AGG | + | chr5_4:65304861-65304880 | None:intergenic | 35.0% | |
TCCGATATCTTGTCTTTGTT+TGG | - | chr5_4:65304862-65304881 | Msa0864760:five_prime_UTR | 35.0% | |
TAGAAGGATGCCTTCAAAAT+TGG | - | chr5_4:65304949-65304968 | Msa0864760:five_prime_UTR | 35.0% | |
! | GAGTGGTGATGAAATGAATG+AGG | + | chr5_4:65297321-65297340 | None:intergenic | 40.0% |
CCGTAGTAATTGAATGTGTG+AGG | - | chr5_4:65297819-65297838 | Msa0864760:CDS | 40.0% | |
!! | GTGCATATTTGGTTCTGCTT+TGG | - | chr5_4:65297872-65297891 | Msa0864760:CDS | 40.0% |
GTCGCTGAATGTGTTATGTT+TGG | - | chr5_4:65297971-65297990 | Msa0864760:CDS | 40.0% | |
AGAAGTGGGTGAGTGTAAAA+TGG | - | chr5_4:65298037-65298056 | Msa0864760:CDS | 40.0% | |
GGGTGAGTGTAAAATGGTTT+AGG | - | chr5_4:65298043-65298062 | Msa0864760:CDS | 40.0% | |
! | CTGAAATTCAATTCTGGAGG+TGG | + | chr5_4:65298209-65298228 | None:intergenic | 40.0% |
CAGCTGAAATTCAATTCTGG+AGG | + | chr5_4:65298212-65298231 | None:intergenic | 40.0% | |
GAGCAGCTGAAATTCAATTC+TGG | + | chr5_4:65298215-65298234 | None:intergenic | 40.0% | |
ATCGTGGCACTATAGCTTAA+TGG | - | chr5_4:65298531-65298550 | Msa0864760:intron | 40.0% | |
GCTATAACACTGTAGCATAG+CGG | - | chr5_4:65298628-65298647 | Msa0864760:CDS | 40.0% | |
AGCATTAGTGTTATCGACCT+CGG | + | chr5_4:65298683-65298702 | None:intergenic | 40.0% | |
!! | TACAAAGCTCAAGCCTTGTT+TGG | - | chr5_4:65298847-65298866 | Msa0864760:CDS | 40.0% |
TACACTCTATTAGAACTGCC+TGG | - | chr5_4:65298896-65298915 | Msa0864760:CDS | 40.0% | |
!! | TCGGGTTGATGATTCATTTC+AGG | - | chr5_4:65299078-65299097 | Msa0864760:intron | 40.0% |
!! | AAAATATCTGAGGCGCTGAT+TGG | - | chr5_4:65299185-65299204 | Msa0864760:intron | 40.0% |
AAGACAATTGGAAACCGAGT+AGG | - | chr5_4:65299373-65299392 | Msa0864760:intron | 40.0% | |
AGACAATTGGAAACCGAGTA+GGG | - | chr5_4:65299374-65299393 | Msa0864760:intron | 40.0% | |
AAAGCTTGATTCACCTAGTG+AGG | - | chr5_4:65299401-65299420 | Msa0864760:intron | 40.0% | |
TCACCTAGTGAGGTAAAACT+TGG | - | chr5_4:65299411-65299430 | Msa0864760:intron | 40.0% | |
! | CAACCAAGTTTTACCTCACT+AGG | + | chr5_4:65299417-65299436 | None:intergenic | 40.0% |
TTTCTCTCTTGCTCTTGTTC+AGG | - | chr5_4:65299444-65299463 | Msa0864760:intron | 40.0% | |
!! | CAACATTTTGTTTCCGTTGC+AGG | - | chr5_4:65299523-65299542 | Msa0864760:intron | 40.0% |
!! | TTTTGTTTCCGTTGCAGGAA+AGG | - | chr5_4:65299528-65299547 | Msa0864760:intron | 40.0% |
CATCAAGCTCCGGATATAAA+CGG | + | chr5_4:65299964-65299983 | None:intergenic | 40.0% | |
AGACTACTTTCATCAAGCTC+CGG | + | chr5_4:65299974-65299993 | None:intergenic | 40.0% | |
CCGCTTATAACAGTAAAAGC+AGG | + | chr5_4:65300389-65300408 | None:intergenic | 40.0% | |
! | GCTTTTACTGTTATAAGCGG+TGG | - | chr5_4:65300389-65300408 | Msa0864760:intron | 40.0% |
AACACACCCTAAGTGTCTAT+AGG | + | chr5_4:65300514-65300533 | None:intergenic | 40.0% | |
ATAGACACTTAGGGTGTGTT+TGG | - | chr5_4:65300514-65300533 | Msa0864760:intron | 40.0% | |
GGAGAGAAAGAATATTGACG+TGG | - | chr5_4:65301113-65301132 | Msa0864760:intron | 40.0% | |
TTGGAAGTTGGATTGTGGAA+AGG | - | chr5_4:65301418-65301437 | Msa0864760:intron | 40.0% | |
GCTTCTATAGCGATTGTTGA+AGG | + | chr5_4:65301569-65301588 | None:intergenic | 40.0% | |
AGAGAAGAGTCCAAACTCAA+TGG | - | chr5_4:65301687-65301706 | Msa0864760:intron | 40.0% | |
!! | TCTTGGCCTTGAATTTGCAT+TGG | - | chr5_4:65301798-65301817 | Msa0864760:CDS | 40.0% |
! | AATCCTGTGCCAGTTTTTGT+AGG | - | chr5_4:65302083-65302102 | Msa0864760:intron | 40.0% |
TATCCTACAAAAACTGGCAC+AGG | + | chr5_4:65302089-65302108 | None:intergenic | 40.0% | |
AAATCACTATGAAGCAGCAG+AGG | + | chr5_4:65302237-65302256 | None:intergenic | 40.0% | |
TCAAATCTGCTTGCTCCAAT+TGG | + | chr5_4:65302317-65302336 | None:intergenic | 40.0% | |
!! | ATTTGATGAAGCACTGCGAA+TGG | - | chr5_4:65302331-65302350 | Msa0864760:intron | 40.0% |
!! | TTTGATGAAGCACTGCGAAT+GGG | - | chr5_4:65302332-65302351 | Msa0864760:intron | 40.0% |
TCACCGACATTACAGTTATG+TGG | + | chr5_4:65302625-65302644 | None:intergenic | 40.0% | |
AACTGTAATGTCGGTGAAGA+TGG | - | chr5_4:65302628-65302647 | Msa0864760:intron | 40.0% | |
ATAGTGCACTAGCACCAAAA+TGG | - | chr5_4:65303087-65303106 | Msa0864760:intron | 40.0% | |
AAACGAAAGAGACGATGTAG+GGG | - | chr5_4:65303125-65303144 | Msa0864760:intron | 40.0% | |
! | AAGGGTATACATCATGCCTA+GGG | - | chr5_4:65303266-65303285 | Msa0864760:intron | 40.0% |
TATACATCATGCCTAGGGTT+TGG | - | chr5_4:65303271-65303290 | Msa0864760:intron | 40.0% | |
!!! | ATCACTGCTACTTTTGGGAA+TGG | - | chr5_4:65303372-65303391 | Msa0864760:intron | 40.0% |
!!! | TCACTGCTACTTTTGGGAAT+GGG | - | chr5_4:65303373-65303392 | Msa0864760:intron | 40.0% |
!! | GAGATTTTTCTTTGCTGTGG+CGG | - | chr5_4:65303456-65303475 | Msa0864760:intron | 40.0% |
AGTGTTTGTGCATTCTTCAC+AGG | + | chr5_4:65303561-65303580 | None:intergenic | 40.0% | |
ACCATGGATGTCTTACAGAA+TGG | - | chr5_4:65303609-65303628 | Msa0864760:intron | 40.0% | |
CCATGGATGTCTTACAGAAT+GGG | - | chr5_4:65303610-65303629 | Msa0864760:intron | 40.0% | |
TTGTCGGTAAGCTTAGTATG+AGG | - | chr5_4:65303640-65303659 | Msa0864760:intron | 40.0% | |
TGTCGGTAAGCTTAGTATGA+GGG | - | chr5_4:65303641-65303660 | Msa0864760:intron | 40.0% | |
TGATGTGAATCCACAGACAA+TGG | - | chr5_4:65303716-65303735 | Msa0864760:intron | 40.0% | |
GATGTGAATCCACAGACAAT+GGG | - | chr5_4:65303717-65303736 | Msa0864760:intron | 40.0% | |
ATGGGGATATTGAATGCTAC+AGG | - | chr5_4:65303769-65303788 | Msa0864760:intron | 40.0% | |
! | AATATGGCTCGAAATGGGTT+CGG | - | chr5_4:65303842-65303861 | Msa0864760:intron | 40.0% |
! | GAGTATTGCTCATTCCACTT+TGG | + | chr5_4:65303895-65303914 | None:intergenic | 40.0% |
AGTGGAATGAGCAATACTCT+TGG | - | chr5_4:65303896-65303915 | Msa0864760:intron | 40.0% | |
GAGCAAACGATACAAGGATA+GGG | - | chr5_4:65303998-65304017 | Msa0864760:intron | 40.0% | |
AAACGATACAAGGATAGGGA+AGG | - | chr5_4:65304002-65304021 | Msa0864760:intron | 40.0% | |
GAAGGTTGAAGTTGAACAAG+AGG | + | chr5_4:65304081-65304100 | None:intergenic | 40.0% | |
CTTGTTCAACTTCAACCTTC+TGG | - | chr5_4:65304081-65304100 | Msa0864760:intron | 40.0% | |
AACAAACTATCGAGCTTGTG+CGG | - | chr5_4:65304250-65304269 | Msa0864760:intron | 40.0% | |
ACAACCTCATTTCTCAATGG+CGG | + | chr5_4:65304297-65304316 | None:intergenic | 40.0% | |
TAGATTCACGTGAAATCGTG+TGG | - | chr5_4:65304328-65304347 | Msa0864760:intron | 40.0% | |
!! | ATTTTGACGACATACGCAAG+TGG | - | chr5_4:65304424-65304443 | Msa0864760:intron | 40.0% |
TCTTCGAATTTGGATGGCAT+TGG | + | chr5_4:65304657-65304676 | None:intergenic | 40.0% | |
GATCGATTAAGAGTTTCTGC+TGG | - | chr5_4:65304699-65304718 | Msa0864760:CDS | 40.0% | |
TGGAAGAGTTGTAACACAGA+TGG | - | chr5_4:65304719-65304738 | Msa0864760:CDS | 40.0% | |
GGAAGAGTTGTAACACAGAT+GGG | - | chr5_4:65304720-65304739 | Msa0864760:CDS | 40.0% | |
ACATTGTAGCTGTTGAATCC+TGG | + | chr5_4:65304791-65304810 | None:intergenic | 40.0% | |
GTGTCTGATAATTGGGATTG+CGG | - | chr5_4:65304824-65304843 | Msa0864760:five_prime_UTR | 40.0% | |
GGAAAAGGTGAACGAAACAT+TGG | + | chr5_4:65304909-65304928 | None:intergenic | 40.0% | |
! | AGGTAGGACCATTCTGAGAA+AGG | - | chr5_4:65297213-65297232 | Msa0864760:CDS | 45.0% |
CGTGAAAGCCTTTCTCAGAA+TGG | + | chr5_4:65297224-65297243 | None:intergenic | 45.0% | |
!! | ATTCGTCTTTTTCACGCGCT+CGG | + | chr5_4:65297350-65297369 | None:intergenic | 45.0% |
TTTCGTGCTTCTGTTCCATC+TGG | - | chr5_4:65297707-65297726 | Msa0864760:CDS | 45.0% | |
ACTCGGCACAGTTAGTTACA+AGG | - | chr5_4:65298820-65298839 | Msa0864760:CDS | 45.0% | |
TAAACTGCACTGCCCTGTTT+AGG | - | chr5_4:65298946-65298965 | Msa0864760:CDS | 45.0% | |
GGTATGAGGCTGTTGAGTTA+CGG | - | chr5_4:65299099-65299118 | Msa0864760:intron | 45.0% | |
GTATGAGGCTGTTGAGTTAC+GGG | - | chr5_4:65299100-65299119 | Msa0864760:intron | 45.0% | |
! | GGGGACAAAGGTGTATATCT+AGG | - | chr5_4:65299125-65299144 | Msa0864760:intron | 45.0% |
CTCTTGCTCTTGTTCAGGAT+AGG | - | chr5_4:65299449-65299468 | Msa0864760:intron | 45.0% | |
!! | TTTTGTTTGCAGGGGGAACT+TGG | - | chr5_4:65300136-65300155 | Msa0864760:intron | 45.0% |
TTTGTTTGCAGGGGGAACTT+GGG | - | chr5_4:65300137-65300156 | Msa0864760:intron | 45.0% | |
TGTGTCCATTGCTGCATGTA+AGG | - | chr5_4:65300177-65300196 | Msa0864760:intron | 45.0% | |
!!! | CTGGGTTAGTTTTTCCAGAC+AGG | + | chr5_4:65300355-65300374 | None:intergenic | 45.0% |
ATAAGCGGTGGAAAACATGC+TGG | - | chr5_4:65300401-65300420 | Msa0864760:intron | 45.0% | |
TTTGGAGAGGGAAGAAACAG+GGG | + | chr5_4:65301163-65301182 | None:intergenic | 45.0% | |
GTTTGGAGAGGGAAGAAACA+GGG | + | chr5_4:65301164-65301183 | None:intergenic | 45.0% | |
TGTTTGGAGAGGGAAGAAAC+AGG | + | chr5_4:65301165-65301184 | None:intergenic | 45.0% | |
ACATCAAGGCTGTTTGGAGA+GGG | + | chr5_4:65301175-65301194 | None:intergenic | 45.0% | |
AGTGTCACATCAAGGCTGTT+TGG | + | chr5_4:65301181-65301200 | None:intergenic | 45.0% | |
!! | AGGAGAGAAGTGTCACATCA+AGG | + | chr5_4:65301189-65301208 | None:intergenic | 45.0% |
ATAACTCCAAAGGGGCTGTT+TGG | + | chr5_4:65301254-65301273 | None:intergenic | 45.0% | |
CCAAAAAGGGAGATGGATGA+CGG | - | chr5_4:65302017-65302036 | Msa0864760:intron | 45.0% | |
GTTGTTCATGACAAAAGGGC+AGG | - | chr5_4:65302576-65302595 | Msa0864760:intron | 45.0% | |
GGGCCACATAACTGTAATGT+CGG | - | chr5_4:65302619-65302638 | Msa0864760:intron | 45.0% | |
TGTAATGTCGGTGAAGATGG+TGG | - | chr5_4:65302631-65302650 | Msa0864760:intron | 45.0% | |
AAAGCTTGCCTGGAGACATT+AGG | + | chr5_4:65302664-65302683 | None:intergenic | 45.0% | |
! | CAAGGGTATACATCATGCCT+AGG | - | chr5_4:65303265-65303284 | Msa0864760:intron | 45.0% |
! | AGTCTAAGACACCAAACCCT+AGG | + | chr5_4:65303285-65303304 | None:intergenic | 45.0% |
!! | CTACTTTTGGGAATGGGACT+GGG | - | chr5_4:65303379-65303398 | Msa0864760:intron | 45.0% |
TGGAGCAAGGAACATTGACA+AGG | - | chr5_4:65303508-65303527 | Msa0864760:intron | 45.0% | |
GAACATTGACAAGGCACAAG+AGG | - | chr5_4:65303517-65303536 | Msa0864760:intron | 45.0% | |
TTGACAAGGCACAAGAGGTT+AGG | - | chr5_4:65303522-65303541 | Msa0864760:intron | 45.0% | |
TGACAAGGCACAAGAGGTTA+GGG | - | chr5_4:65303523-65303542 | Msa0864760:intron | 45.0% | |
ATGGTTACAATACGACGCTC+CGG | + | chr5_4:65303594-65303613 | None:intergenic | 45.0% | |
CCCATTCTGTAAGACATCCA+TGG | + | chr5_4:65303613-65303632 | None:intergenic | 45.0% | |
AATCCACAGACAATGGGATC+TGG | - | chr5_4:65303723-65303742 | Msa0864760:intron | 45.0% | |
GGAGCAAACGATACAAGGAT+AGG | - | chr5_4:65303997-65304016 | Msa0864760:intron | 45.0% | |
!! | AGCGGATTGTCGAAATGTTG+TGG | + | chr5_4:65304201-65304220 | None:intergenic | 45.0% |
TATAACTGAGCTGGAGACAG+CGG | + | chr5_4:65304219-65304238 | None:intergenic | 45.0% | |
TGAACCGCCATTGAGAAATG+AGG | - | chr5_4:65304290-65304309 | Msa0864760:intron | 45.0% | |
TTGCTGGCAACAACGATTGA+GGG | + | chr5_4:65304506-65304525 | None:intergenic | 45.0% | |
ATTGCTGGCAACAACGATTG+AGG | + | chr5_4:65304507-65304526 | None:intergenic | 45.0% | |
CTGCAGTTTCTCCATTGTAG+CGG | + | chr5_4:65304754-65304773 | None:intergenic | 45.0% | |
!!! | GCAGTCTCTTTTGAGTTTCC+AGG | - | chr5_4:65304770-65304789 | Msa0864760:exon | 45.0% |
GATAATTGGGATTGCGGCTT+TGG | - | chr5_4:65304830-65304849 | Msa0864760:five_prime_UTR | 45.0% | |
!! | AATAAAATTGAATTATTATT+TGG | - | chr5_4:65301721-65301740 | Msa0864760:intron | 5.0% |
! | TGACGGCGTCTTCGAGTTTA+CGG | + | chr5_4:65297434-65297453 | None:intergenic | 50.0% |
TACGATGAAGAGAACGGGGT+CGG | + | chr5_4:65297481-65297500 | None:intergenic | 50.0% | |
GTTCCATCTGGAAACTCCAC+TGG | - | chr5_4:65297719-65297738 | Msa0864760:CDS | 50.0% | |
ATGCCAGTGGAGTTTCCAGA+TGG | + | chr5_4:65297725-65297744 | None:intergenic | 50.0% | |
!! | CCATGAAGGCACTGTCACTA+TGG | + | chr5_4:65298426-65298445 | None:intergenic | 50.0% |
CCATAGTGACAGTGCCTTCA+TGG | - | chr5_4:65298423-65298442 | Msa0864760:CDS | 50.0% | |
GCGGTCTTTGAACAAACCAC+TGG | - | chr5_4:65298647-65298666 | Msa0864760:intron | 50.0% | |
!! | TCTGCTGAACTGTGCTGACT+CGG | - | chr5_4:65298803-65298822 | Msa0864760:CDS | 50.0% |
TTAGAACTGCCTGGCCAATG+TGG | - | chr5_4:65298905-65298924 | Msa0864760:CDS | 50.0% | |
CTCAATCAGCCTAGCCACAT+TGG | + | chr5_4:65298922-65298941 | None:intergenic | 50.0% | |
AGGCTGTTGAGTTACGGGAT+GGG | - | chr5_4:65299105-65299124 | Msa0864760:intron | 50.0% | |
!! | ATCTGAGGCGCTGATTGGTA+TGG | - | chr5_4:65299190-65299209 | Msa0864760:intron | 50.0% |
! | TCAATCTGGGACTGCAGTGT+TGG | + | chr5_4:65299218-65299237 | None:intergenic | 50.0% |
TTGTTTGCAGGGGGAACTTG+GGG | - | chr5_4:65300138-65300157 | Msa0864760:intron | 50.0% | |
TCCATTGCTGCATGTAAGGC+TGG | - | chr5_4:65300181-65300200 | Msa0864760:intron | 50.0% | |
CCATTGCTGCATGTAAGGCT+GGG | - | chr5_4:65300182-65300201 | Msa0864760:intron | 50.0% | |
CATTGCTGCATGTAAGGCTG+GGG | - | chr5_4:65300183-65300202 | Msa0864760:intron | 50.0% | |
GGGCTGCTGAAAAGGAAGTA+TGG | - | chr5_4:65300203-65300222 | Msa0864760:intron | 50.0% | |
TCAGCGATGTGCTTGTAGAG+TGG | + | chr5_4:65300332-65300351 | None:intergenic | 50.0% | |
!! | AAGCAGGAACAGGAAGCACT+GGG | + | chr5_4:65300373-65300392 | None:intergenic | 50.0% |
! | AAAGCAGGAACAGGAAGCAC+TGG | + | chr5_4:65300374-65300393 | None:intergenic | 50.0% |
CTCACGTTTCTTCGCACCTT+TGG | - | chr5_4:65301092-65301111 | Msa0864760:intron | 50.0% | |
CACATCAAGGCTGTTTGGAG+AGG | + | chr5_4:65301176-65301195 | None:intergenic | 50.0% | |
ACTGCGTGACACTTTAAGCC+AGG | + | chr5_4:65301505-65301524 | None:intergenic | 50.0% | |
TCCACCTCTCTTCGTACTCT+TGG | - | chr5_4:65301781-65301800 | Msa0864760:CDS | 50.0% | |
! | AAGGCCAAGAGTACGAAGAG+AGG | + | chr5_4:65301788-65301807 | None:intergenic | 50.0% |
ATGCTAGACATGGGCACTTG+TGG | - | chr5_4:65301929-65301948 | Msa0864760:intron | 50.0% | |
GGTTGCAGGAGTGAGTTCAT+CGG | - | chr5_4:65301950-65301969 | Msa0864760:intron | 50.0% | |
! | CAGGAGTGAGTTCATCGGTT+TGG | - | chr5_4:65301955-65301974 | Msa0864760:intron | 50.0% |
! | CCGTCATCCATCTCCCTTTT+TGG | + | chr5_4:65302020-65302039 | None:intergenic | 50.0% |
GCTTTGCTCCTAATGTCTCC+AGG | - | chr5_4:65302653-65302672 | Msa0864760:intron | 50.0% | |
GGTGCTAGTGCACTATCAGT+TGG | + | chr5_4:65303083-65303102 | None:intergenic | 50.0% | |
!!! | GCTACTTTTGGGAATGGGAC+TGG | - | chr5_4:65303378-65303397 | Msa0864760:intron | 50.0% |
TGGTTACAATACGACGCTCC+GGG | + | chr5_4:65303593-65303612 | None:intergenic | 50.0% | |
!! | GGAGCGTCGTATTGTAACCA+TGG | - | chr5_4:65303593-65303612 | Msa0864760:intron | 50.0% |
GCTTAGTATGAGGGCCACTT+TGG | - | chr5_4:65303650-65303669 | Msa0864760:intron | 50.0% | |
! | AGTATGAGGGCCACTTTGGA+TGG | - | chr5_4:65303654-65303673 | Msa0864760:intron | 50.0% |
ATGATACCCGCCATCCAAAG+TGG | + | chr5_4:65303667-65303686 | None:intergenic | 50.0% | |
TTCACATCAGTGCTGTACCG+TGG | + | chr5_4:65303705-65303724 | None:intergenic | 50.0% | |
TCTCCAGATCCCATTGTCTG+TGG | + | chr5_4:65303729-65303748 | None:intergenic | 50.0% | |
GGGATCTGGAGACCAAACAT+TGG | - | chr5_4:65303737-65303756 | Msa0864760:intron | 50.0% | |
CTTCCAGCGATGAAACCTCA+TGG | - | chr5_4:65303793-65303812 | Msa0864760:intron | 50.0% | |
CTGCTGGAGCAAACGATACA+AGG | - | chr5_4:65303992-65304011 | Msa0864760:intron | 50.0% | |
ACCTTCTGGGCTGAAGAAGA+TGG | - | chr5_4:65304095-65304114 | Msa0864760:intron | 50.0% | |
CCTTCTGGGCTGAAGAAGAT+GGG | - | chr5_4:65304096-65304115 | Msa0864760:intron | 50.0% | |
CTTCTGGGCTGAAGAAGATG+GGG | - | chr5_4:65304097-65304116 | Msa0864760:intron | 50.0% | |
TTCTGGGCTGAAGAAGATGG+GGG | - | chr5_4:65304098-65304117 | Msa0864760:intron | 50.0% | |
! | GACGGCGTCTTCGAGTTTAC+GGG | + | chr5_4:65297433-65297452 | None:intergenic | 55.0% |
!!! | GTCGGAGGTTTTGGCTCTGA+CGG | + | chr5_4:65297463-65297482 | None:intergenic | 55.0% |
GAGGCTGTTGAGTTACGGGA+TGG | - | chr5_4:65299104-65299123 | Msa0864760:intron | 55.0% | |
GGCTGTTGAGTTACGGGATG+GGG | - | chr5_4:65299106-65299125 | Msa0864760:intron | 55.0% | |
GAGTTACGGGATGGGGACAA+AGG | - | chr5_4:65299113-65299132 | Msa0864760:intron | 55.0% | |
CCCAGCCTTACATGCAGCAA+TGG | + | chr5_4:65300185-65300204 | None:intergenic | 55.0% | |
TAAGGCTGGGGCTGCTGAAA+AGG | - | chr5_4:65300195-65300214 | Msa0864760:intron | 55.0% | |
AAGCACATCGCTGACCTGTC+TGG | - | chr5_4:65300338-65300357 | Msa0864760:intron | 55.0% | |
CCAAAGGGGCTGTTTGGTTG+AGG | + | chr5_4:65301248-65301267 | None:intergenic | 55.0% | |
CCTCAACCAAACAGCCCCTT+TGG | - | chr5_4:65301245-65301264 | Msa0864760:intron | 55.0% | |
! | GCCAAGAGTACGAAGAGAGG+TGG | + | chr5_4:65301785-65301804 | None:intergenic | 55.0% |
ACATGGGCACTTGTGGTTGC+AGG | - | chr5_4:65301936-65301955 | Msa0864760:intron | 55.0% | |
GACTGGGATCGCTAGCAAGT+TGG | - | chr5_4:65303395-65303414 | Msa0864760:intron | 55.0% | |
! | ATGAGGGCCACTTTGGATGG+CGG | - | chr5_4:65303657-65303676 | Msa0864760:intron | 55.0% |
CGACCATGAGGTTTCATCGC+TGG | + | chr5_4:65303799-65303818 | None:intergenic | 55.0% | |
CCCATCTTCTTCAGCCCAGA+AGG | + | chr5_4:65304099-65304118 | None:intergenic | 55.0% | |
GGGTGAGTTTGCCGCTACAA+TGG | - | chr5_4:65304740-65304759 | Msa0864760:CDS | 55.0% | |
!!! | GGAGGTTTTGGCTCTGACGG+CGG | + | chr5_4:65297460-65297479 | None:intergenic | 60.0% |
! | GAGAACGGGGTCGGAGGTTT+TGG | + | chr5_4:65297472-65297491 | None:intergenic | 60.0% |
GATGAAGAGAACGGGGTCGG+AGG | + | chr5_4:65297478-65297497 | None:intergenic | 60.0% | |
CCTCGGATCGCAGAAACCAG+TGG | + | chr5_4:65298666-65298685 | None:intergenic | 60.0% | |
!! | CCACTGGTTTCTGCGATCCG+AGG | - | chr5_4:65298663-65298682 | Msa0864760:intron | 60.0% |
ACTGCCTGGCCAATGTGGCT+AGG | - | chr5_4:65298910-65298929 | Msa0864760:CDS | 60.0% | |
TCAGCCTAGCCACATTGGCC+AGG | + | chr5_4:65298917-65298936 | None:intergenic | 60.0% | |
! | TGAGGGCCACTTTGGATGGC+GGG | - | chr5_4:65303658-65303677 | Msa0864760:intron | 60.0% |
!! | TAGGCATCGGTGCGACCATG+AGG | + | chr5_4:65303811-65303830 | None:intergenic | 60.0% |
CACGCGCTCGGAGATGAGAG+TGG | + | chr5_4:65297338-65297357 | None:intergenic | 65.0% | |
! | GGCTCTGACGGCGGCATTGA+CGG | + | chr5_4:65297451-65297470 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_4 | gene | 65297198 | 65304980 | 65297198 | ID=Msa0864760;Name=Msa0864760 |
chr5_4 | mRNA | 65297198 | 65304980 | 65297198 | ID=Msa0864760-mRNA-1;Parent=Msa0864760;Name=Msa0864760-mRNA-1;_AED=0.07;_eAED=0.13;_QI=195|0.66|0.6|1|1|1|10|0|790 |
chr5_4 | exon | 65297198 | 65298446 | 65297198 | ID=Msa0864760-mRNA-1:exon:20620;Parent=Msa0864760-mRNA-1 |
chr5_4 | exon | 65298533 | 65298661 | 65298533 | ID=Msa0864760-mRNA-1:exon:20619;Parent=Msa0864760-mRNA-1 |
chr5_4 | exon | 65298766 | 65299003 | 65298766 | ID=Msa0864760-mRNA-1:exon:20618;Parent=Msa0864760-mRNA-1 |
chr5_4 | exon | 65299529 | 65299580 | 65299529 | ID=Msa0864760-mRNA-1:exon:20617;Parent=Msa0864760-mRNA-1 |
chr5_4 | exon | 65299799 | 65299879 | 65299799 | ID=Msa0864760-mRNA-1:exon:20616;Parent=Msa0864760-mRNA-1 |
chr5_4 | exon | 65301736 | 65301852 | 65301736 | ID=Msa0864760-mRNA-1:exon:20615;Parent=Msa0864760-mRNA-1 |
chr5_4 | exon | 65301959 | 65302030 | 65301959 | ID=Msa0864760-mRNA-1:exon:20614;Parent=Msa0864760-mRNA-1 |
chr5_4 | exon | 65302904 | 65303078 | 65302904 | ID=Msa0864760-mRNA-1:exon:20613;Parent=Msa0864760-mRNA-1 |
chr5_4 | exon | 65304434 | 65304588 | 65304434 | ID=Msa0864760-mRNA-1:exon:20612;Parent=Msa0864760-mRNA-1 |
chr5_4 | exon | 65304681 | 65304980 | 65304681 | ID=Msa0864760-mRNA-1:exon:20611;Parent=Msa0864760-mRNA-1 |
chr5_4 | five_prime_UTR | 65304786 | 65304980 | 65304786 | ID=Msa0864760-mRNA-1:five_prime_utr;Parent=Msa0864760-mRNA-1 |
chr5_4 | CDS | 65304681 | 65304785 | 65304681 | ID=Msa0864760-mRNA-1:cds;Parent=Msa0864760-mRNA-1 |
chr5_4 | CDS | 65304434 | 65304588 | 65304434 | ID=Msa0864760-mRNA-1:cds;Parent=Msa0864760-mRNA-1 |
chr5_4 | CDS | 65302904 | 65303078 | 65302904 | ID=Msa0864760-mRNA-1:cds;Parent=Msa0864760-mRNA-1 |
chr5_4 | CDS | 65301959 | 65302030 | 65301959 | ID=Msa0864760-mRNA-1:cds;Parent=Msa0864760-mRNA-1 |
chr5_4 | CDS | 65301736 | 65301852 | 65301736 | ID=Msa0864760-mRNA-1:cds;Parent=Msa0864760-mRNA-1 |
chr5_4 | CDS | 65299799 | 65299879 | 65299799 | ID=Msa0864760-mRNA-1:cds;Parent=Msa0864760-mRNA-1 |
chr5_4 | CDS | 65299529 | 65299580 | 65299529 | ID=Msa0864760-mRNA-1:cds;Parent=Msa0864760-mRNA-1 |
chr5_4 | CDS | 65298766 | 65299003 | 65298766 | ID=Msa0864760-mRNA-1:cds;Parent=Msa0864760-mRNA-1 |
chr5_4 | CDS | 65298533 | 65298661 | 65298533 | ID=Msa0864760-mRNA-1:cds;Parent=Msa0864760-mRNA-1 |
chr5_4 | CDS | 65297198 | 65298446 | 65297198 | ID=Msa0864760-mRNA-1:cds;Parent=Msa0864760-mRNA-1 |
Gene Sequence |
Protein sequence |