AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0865070

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0865070 MtrunA17_Chr1g0167311 88.889 189 13 1 1 189 151 331 6.84e-118 344
Msa0865070 MtrunA17_Chr1g0167351 82.011 189 26 1 1 189 146 326 1.03e-108 321
Msa0865070 MtrunA17_Chr1g0187581 74.074 189 40 2 1 189 153 332 8.32e-99 296
Msa0865070 MtrunA17_Chr1g0183651 73.016 189 41 3 1 189 156 334 4.18e-95 287
Msa0865070 MtrunA17_Chr7g0261491 73.545 189 40 3 1 189 156 334 1.74e-94 286
Msa0865070 MtrunA17_Chr2g0299781 61.000 200 63 4 1 193 149 340 4.42e-76 237
Msa0865070 MtrunA17_Chr3g0135951 61.053 190 71 3 1 189 130 317 3.75e-75 234
Msa0865070 MtrunA17_Chr1g0153321 60.847 189 66 3 1 189 144 324 5.81e-73 229
Msa0865070 MtrunA17_Chr6g0478601 38.860 193 95 4 1 191 147 318 4.30e-33 123
Msa0865070 MtrunA17_Chr4g0018201 40.201 199 89 6 1 193 795 969 4.41e-33 124
Msa0865070 MtrunA17_Chr5g0428981 39.698 199 90 6 1 193 799 973 7.72e-33 124
Msa0865070 MtrunA17_Chr1g0197721 45.133 113 62 0 6 118 92 204 1.66e-27 108
Msa0865070 MtrunA17_Chr4g0059751 30.570 193 83 2 1 193 132 273 1.74e-26 104
Msa0865070 MtrunA17_Chr4g0030361 34.975 203 90 6 1 193 345 515 7.72e-25 100
Msa0865070 MtrunA17_Chr2g0309421 31.416 226 115 7 1 193 213 431 4.48e-24 98.6
Msa0865070 MtrunA17_Chr7g0245031 29.231 195 85 3 1 193 184 327 2.14e-23 96.3
Msa0865070 MtrunA17_Chr2g0327561 41.176 119 63 2 1 112 664 782 9.84e-23 95.1
Msa0865070 MtrunA17_Chr8g0369091 30.964 197 91 3 1 185 635 798 1.58e-22 94.4
Msa0865070 MtrunA17_Chr1g0179101 27.700 213 130 3 4 192 511 723 1.64e-20 88.6
Msa0865070 MtrunA17_Chr8g0335351 29.778 225 120 6 1 193 408 626 2.01e-20 88.2
Msa0865070 MtrunA17_Chr7g0227331 35.606 132 78 3 3 129 272 401 4.87e-20 87.0
Msa0865070 MtrunA17_Chr7g0266031 28.241 216 125 5 4 192 533 745 3.07e-19 85.1
Msa0865070 MtrunA17_Chr2g0312641 27.749 191 129 3 1 189 132 315 6.79e-19 83.6
Msa0865070 MtrunA17_Chr7g0250631 37.615 109 66 1 3 109 404 512 1.01e-18 83.6
Msa0865070 MtrunA17_Chr8g0356291 27.149 221 131 5 1 193 165 383 1.24e-18 83.2
Msa0865070 MtrunA17_Chr2g0290691 35.135 111 70 1 1 109 242 352 1.44e-18 82.8
Msa0865070 MtrunA17_Chr3g0080101 26.977 215 131 4 1 189 453 667 7.93e-18 80.9
Msa0865070 MtrunA17_Chr1g0188991 37.864 103 62 1 10 110 58 160 9.29e-18 80.5
Msa0865070 MtrunA17_Chr2g0321101 33.333 111 72 1 1 109 130 240 3.79e-17 78.6
Msa0865070 MtrunA17_Chr4g0063311 28.319 226 119 6 4 193 137 355 3.94e-17 78.6
Msa0865070 MtrunA17_Chr3g0125381 30.636 173 68 4 25 195 12 134 1.10e-16 75.1
Msa0865070 MtrunA17_Chr4g0013131 34.862 109 70 1 1 109 48 155 1.49e-16 77.0
Msa0865070 MtrunA17_Chr4g0074111 34.545 110 71 1 1 110 54 162 2.82e-16 75.9
Msa0865070 MtrunA17_Chr2g0284031 36.697 109 68 1 1 109 67 174 3.04e-16 76.3
Msa0865070 MtrunA17_Chr8g0379091 35.780 109 69 1 1 109 62 169 5.36e-16 75.5
Msa0865070 MtrunA17_Chr2g0286501 32.727 110 74 0 4 113 82 191 1.24e-15 74.7
Msa0865070 MtrunA17_Chr2g0285711 27.957 186 114 4 13 184 137 316 1.73e-15 73.9
Msa0865070 MtrunA17_Chr3g0140631 31.746 126 83 2 2 126 73 196 1.85e-15 72.8
Msa0865070 MtrunA17_Chr2g0304111 25.926 189 92 3 1 189 59 199 2.31e-15 73.6
Msa0865070 MtrunA17_Chr4g0063881 34.862 109 71 0 1 109 47 155 2.61e-15 73.2
Msa0865070 MtrunA17_Chr8g0338741 25.871 201 129 5 5 189 70 266 3.08e-15 73.2
Msa0865070 MtrunA17_Chr8g0351491 41.176 85 50 0 25 109 76 160 3.84e-15 71.6
Msa0865070 MtrunA17_Chr7g0234641 24.747 198 136 3 5 189 60 257 5.73e-15 72.4
Msa0865070 MtrunA17_Chr8g0381091 28.426 197 121 6 13 193 133 325 8.79e-15 71.6
Msa0865070 MtrunA17_Chr5g0432491 25.134 187 92 3 3 189 61 199 1.10e-14 71.6
Msa0865070 MtrunA17_Chr3g0107011 33.945 109 71 1 1 109 50 157 1.14e-14 71.6
Msa0865070 MtrunA17_Chr2g0330211 31.624 117 78 1 3 117 55 171 1.20e-14 71.6
Msa0865070 MtrunA17_Chr6g0453681 28.814 118 84 0 8 125 62 179 1.33e-14 71.2
Msa0865070 MtrunA17_Chr6g0468751 28.814 118 84 0 8 125 62 179 1.60e-14 71.2
Msa0865070 MtrunA17_Chr2g0284011 34.211 114 74 1 1 114 48 160 2.11e-14 70.9
Msa0865070 MtrunA17_Chr8g0346071 30.909 110 76 0 1 110 53 162 2.12e-14 70.5
Msa0865070 MtrunA17_Chr1g0188031 37.647 85 53 0 25 109 82 166 2.12e-14 70.5
Msa0865070 MtrunA17_Chr4g0032761 23.618 199 128 5 11 185 68 266 2.71e-14 70.5
Msa0865070 MtrunA17_Chr8g0386981 34.862 109 71 0 3 111 448 556 3.52e-14 70.1
Msa0865070 MtrunA17_Chr8g0353621 38.824 85 52 0 25 109 70 154 4.92e-14 68.6
Msa0865070 MtrunA17_Chr1g0205421 25.926 189 91 4 1 189 48 187 5.05e-14 69.7
Msa0865070 MtrunA17_Chr7g0272841 30.275 109 76 0 3 111 111 219 5.23e-14 69.7
Msa0865070 MtrunA17_Chr7g0244521 27.568 185 85 3 5 189 52 187 5.77e-14 69.3
Msa0865070 MtrunA17_Chr3g0107051 25.405 185 89 3 5 189 61 196 8.60e-14 68.9
Msa0865070 MtrunA17_Chr8g0346081 30.275 109 76 0 1 109 53 161 9.02e-14 68.9
Msa0865070 MtrunA17_Chr5g0419441 33.913 115 73 2 2 113 272 386 1.07e-13 68.9
Msa0865070 MtrunA17_Chr2g0317001 33.645 107 71 0 7 113 55 161 1.09e-13 68.9
Msa0865070 MtrunA17_Chr7g0274941 37.647 85 51 2 25 108 77 160 1.44e-13 67.8
Msa0865070 MtrunA17_Chr5g0428031 32.203 118 74 1 10 127 54 165 1.96e-13 67.8
Msa0865070 MtrunA17_Chr3g0132671 28.448 116 83 0 10 125 94 209 3.93e-13 67.0
Msa0865070 MtrunA17_Chr4g0008561 30.579 121 81 1 8 125 61 181 4.20e-13 67.0
Msa0865070 MtrunA17_Chr5g0441011 30.000 110 77 0 1 110 49 158 5.02e-13 66.6
Msa0865070 MtrunA17_Chr3g0130151 32.174 115 78 0 3 117 284 398 5.12e-13 66.6
Msa0865070 MtrunA17_Chr6g0450571 30.392 102 69 1 10 109 59 160 7.69e-13 66.2
Msa0865070 MtrunA17_Chr3g0114511 33.028 109 70 1 1 109 68 173 8.70e-13 65.9
Msa0865070 MtrunA17_Chr5g0432471 32.692 104 69 1 6 109 53 155 9.90e-13 65.9
Msa0865070 MtrunA17_Chr3g0129721 31.034 116 77 1 13 125 72 187 1.02e-12 65.1
Msa0865070 MtrunA17_Chr6g0453671 27.731 119 86 0 8 126 62 180 1.04e-12 65.5
Msa0865070 MtrunA17_Chr1g0202831 34.314 102 67 0 10 111 458 559 1.21e-12 65.9
Msa0865070 MtrunA17_Chr4g0000431 32.353 102 67 1 10 109 67 168 1.41e-12 65.5
Msa0865070 MtrunA17_Chr8g0345801 27.586 116 81 1 13 125 62 177 1.65e-12 64.3
Msa0865070 MtrunA17_Chr4g0001331 34.951 103 66 1 7 109 62 163 1.69e-12 65.1
Msa0865070 MtrunA17_Chr5g0424651 28.448 116 82 1 4 119 361 475 2.60e-12 64.7
Msa0865070 MtrunA17_Chr5g0424501 29.204 113 79 1 7 119 235 346 1.11e-11 62.8
Msa0865070 MtrunA17_Chr1g0150321 27.568 185 85 4 5 189 53 188 1.12e-11 62.8
Msa0865070 MtrunA17_Chr5g0424581 29.091 110 77 1 10 119 171 279 1.33e-11 62.4
Msa0865070 MtrunA17_Chr2g0326531 35.000 80 52 0 38 117 200 279 2.19e-11 62.0
Msa0865070 MtrunA17_Chr1g0166101 36.471 85 54 0 25 109 85 169 2.55e-11 61.6
Msa0865070 MtrunA17_Chr3g0091291 32.323 99 66 1 11 109 6 103 2.56e-11 60.5
Msa0865070 MtrunA17_Chr8g0384301 32.110 109 74 0 3 111 339 447 2.64e-11 62.0
Msa0865070 MtrunA17_Chr2g0333821 32.000 100 67 1 10 109 59 157 3.04e-11 61.6
Msa0865070 MtrunA17_Chr1g0205931 28.302 106 76 0 3 108 98 203 3.09e-11 61.6
Msa0865070 MtrunA17_Chr4g0051191 28.696 115 81 1 10 124 210 323 3.34e-11 61.2
Msa0865070 MtrunA17_Chr3g0091311 31.776 107 72 1 1 107 48 153 3.40e-11 60.5
Msa0865070 MtrunA17_Chr5g0443471 29.167 120 82 1 6 122 203 322 5.28e-11 60.8
Msa0865070 MtrunA17_Chr4g0072831 38.889 72 44 0 38 109 62 133 5.83e-11 60.5
Msa0865070 MtrunA17_Chr5g0423891 38.053 113 64 4 4 111 199 310 6.92e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0865070 AT4G14350.2 74.074 189 40 2 1 189 155 334 4.16e-97 292
Msa0865070 AT4G14350.1 74.074 189 40 2 1 189 155 334 4.16e-97 292
Msa0865070 AT4G14350.4 74.074 189 40 2 1 189 155 334 4.16e-97 292
Msa0865070 AT4G14350.3 74.074 189 40 2 1 189 155 334 4.42e-97 292
Msa0865070 AT3G23310.1 73.298 191 40 3 1 189 156 337 5.54e-95 287
Msa0865070 AT2G20470.3 67.725 189 50 2 1 189 160 337 5.38e-89 271
Msa0865070 AT2G20470.2 67.725 189 50 2 1 189 160 337 1.78e-88 270
Msa0865070 AT2G20470.1 67.725 189 50 2 1 189 160 337 1.78e-88 270
Msa0865070 AT1G03920.2 69.312 189 48 3 1 189 60 238 1.48e-86 262
Msa0865070 AT1G03920.1 69.312 189 48 3 1 189 173 351 1.07e-85 263
Msa0865070 AT1G03920.3 69.312 189 48 3 1 189 173 351 1.07e-85 263
Msa0865070 AT4G33080.2 60.825 194 65 3 1 189 130 317 7.84e-75 234
Msa0865070 AT4G33080.1 60.825 194 65 3 1 189 130 317 8.33e-75 234
Msa0865070 AT2G19400.1 61.111 198 66 3 1 193 141 332 1.30e-74 233
Msa0865070 AT1G30640.3 58.854 192 68 3 1 189 63 246 8.64e-73 227
Msa0865070 AT5G09890.1 61.979 192 61 4 1 189 138 320 1.31e-72 228
Msa0865070 AT5G09890.2 61.979 192 61 4 1 189 138 320 1.34e-72 228
Msa0865070 AT1G30640.2 58.854 192 68 3 1 189 156 339 2.17e-72 229
Msa0865070 AT1G30640.1 58.854 192 68 3 1 189 156 339 2.17e-72 229
Msa0865070 AT5G62310.1 42.328 189 90 6 1 189 790 959 2.41e-34 129
Msa0865070 AT3G17850.1 38.144 194 97 4 1 192 918 1090 4.90e-32 122
Msa0865070 AT1G48490.3 37.500 192 95 3 1 192 864 1030 1.13e-31 121
Msa0865070 AT1G48490.2 37.500 192 95 3 1 192 864 1030 1.13e-31 121
Msa0865070 AT1G48490.1 37.500 192 95 3 1 192 864 1030 1.13e-31 121
Msa0865070 AT1G48490.4 37.500 192 95 3 1 192 865 1031 1.22e-31 121
Msa0865070 AT1G45160.1 38.462 195 95 5 1 193 706 877 5.74e-31 119
Msa0865070 AT1G45160.2 38.462 195 95 5 1 193 706 877 6.92e-31 119
Msa0865070 AT5G04510.3 44.248 113 63 0 6 118 85 197 7.69e-28 106
Msa0865070 AT5G04510.2 44.248 113 63 0 6 118 85 197 1.29e-27 107
Msa0865070 AT5G04510.1 44.248 113 63 0 6 118 85 197 1.88e-27 108
Msa0865070 AT3G10540.1 44.248 113 63 0 6 118 86 198 8.65e-27 106
Msa0865070 AT3G08730.1 29.744 195 84 3 1 193 170 313 3.01e-24 99.0
Msa0865070 AT3G08730.2 29.744 195 84 3 1 193 170 313 3.01e-24 99.0
Msa0865070 AT3G08720.1 29.744 195 84 3 1 193 176 319 5.42e-24 98.6
Msa0865070 AT3G08720.3 29.744 195 84 3 1 193 176 319 5.42e-24 98.6
Msa0865070 AT3G08720.4 29.744 195 84 3 1 193 176 319 5.42e-24 98.6
Msa0865070 AT3G08720.2 29.744 195 84 3 1 193 176 319 5.42e-24 98.6
Msa0865070 AT1G79250.1 28.959 221 129 4 1 193 182 402 9.36e-23 95.1
Msa0865070 AT1G79250.3 28.959 221 129 4 1 193 182 402 9.36e-23 95.1
Msa0865070 AT1G79250.2 28.959 221 129 4 1 193 182 402 9.36e-23 95.1
Msa0865070 AT1G79250.4 28.959 221 129 4 1 193 182 402 9.36e-23 95.1
Msa0865070 AT3G45780.2 40.336 119 64 2 1 112 699 817 8.79e-22 92.8
Msa0865070 AT3G45780.1 40.336 119 64 2 1 112 699 817 8.79e-22 92.8
Msa0865070 AT5G55910.2 30.973 226 121 7 1 193 145 368 1.18e-21 92.0
Msa0865070 AT5G55910.1 30.973 226 121 7 1 193 145 368 1.18e-21 92.0
Msa0865070 AT1G16440.1 29.032 217 121 6 1 193 151 358 4.27e-21 90.5
Msa0865070 AT5G58140.3 30.928 194 109 3 1 192 613 783 6.88e-21 90.1
Msa0865070 AT5G58140.6 30.928 194 109 3 1 192 613 783 7.31e-21 90.1
Msa0865070 AT5G58140.7 30.928 194 109 3 1 192 613 783 7.31e-21 90.1
Msa0865070 AT5G58140.5 30.928 194 109 3 1 192 613 783 7.31e-21 90.1
Msa0865070 AT5G58140.2 30.928 194 109 3 1 192 613 783 7.31e-21 90.1
Msa0865070 AT5G58140.1 30.928 194 109 3 1 192 613 783 7.31e-21 90.1
Msa0865070 AT5G47750.1 29.204 226 124 8 1 193 227 449 3.21e-20 88.2
Msa0865070 AT4G26610.1 28.636 220 130 4 1 193 159 378 4.11e-20 87.8
Msa0865070 AT2G36350.1 28.571 224 121 7 4 192 598 817 4.55e-20 87.8
Msa0865070 AT3G52890.2 30.357 224 119 7 4 192 577 798 4.68e-20 87.8
Msa0865070 AT3G52890.4 30.357 224 119 7 4 192 577 798 4.68e-20 87.8
Msa0865070 AT3G52890.1 30.357 224 119 7 4 192 577 798 4.68e-20 87.8
Msa0865070 AT3G52890.3 30.357 224 119 7 4 192 577 798 4.68e-20 87.8
Msa0865070 AT3G27580.2 29.148 223 126 6 1 193 218 438 1.17e-19 86.3
Msa0865070 AT3G27580.1 29.148 223 126 6 1 193 218 438 1.17e-19 86.3
Msa0865070 AT4G24400.2 36.697 109 69 0 1 109 45 153 2.12e-19 85.1
Msa0865070 AT4G24400.1 36.697 109 69 0 1 109 45 153 2.36e-19 85.1
Msa0865070 AT2G44830.2 37.963 108 65 1 4 109 402 509 3.10e-19 85.1
Msa0865070 AT2G44830.3 37.963 108 65 1 4 109 402 509 3.10e-19 85.1
Msa0865070 AT2G44830.1 37.963 108 65 1 4 109 402 509 3.10e-19 85.1
Msa0865070 AT3G44610.1 26.009 223 133 5 1 193 115 335 6.83e-19 84.0
Msa0865070 AT3G20830.1 32.086 187 111 7 20 193 79 262 1.36e-18 82.8
Msa0865070 AT2G34650.1 29.944 177 117 3 13 184 128 302 1.95e-18 82.8
Msa0865070 AT3G12690.1 26.818 220 125 7 1 193 221 431 2.96e-18 82.4
Msa0865070 AT3G12690.3 26.818 220 125 7 1 193 221 431 2.96e-18 82.4
Msa0865070 AT3G12690.2 26.818 220 125 7 1 193 221 431 2.96e-18 82.4
Msa0865070 AT2G26700.1 37.374 99 60 1 13 109 137 235 3.42e-18 82.0
Msa0865070 AT2G45490.2 40.196 102 59 1 25 126 82 181 3.61e-18 80.1
Msa0865070 AT2G45490.1 40.196 102 59 1 25 126 82 181 5.33e-18 80.1
Msa0865070 AT4G13000.1 26.768 198 123 5 3 189 59 245 6.30e-17 78.2
Msa0865070 AT5G03640.2 27.679 224 121 6 4 192 580 797 1.30e-16 77.8
Msa0865070 AT5G03640.1 27.679 224 121 6 4 192 580 797 1.30e-16 77.8
Msa0865070 AT1G53700.1 23.196 194 142 2 1 192 130 318 2.37e-16 76.6
Msa0865070 AT5G18700.1 35.294 102 66 0 13 114 46 147 3.76e-16 76.6
Msa0865070 AT5G40030.1 25.806 217 133 7 1 192 150 363 4.24e-16 76.3
Msa0865070 AT5G45810.1 35.780 109 69 1 1 109 64 171 5.01e-16 75.9
Msa0865070 AT4G18700.1 35.780 109 69 1 1 109 62 169 6.16e-16 75.5
Msa0865070 AT5G25110.1 28.649 185 83 3 5 189 83 218 6.91e-16 75.5
Msa0865070 AT1G51170.1 29.902 204 124 7 2 193 65 261 1.51e-15 74.3
Msa0865070 AT3G14370.1 25.946 185 132 2 10 192 133 314 1.84e-15 74.3
Msa0865070 AT1G54960.1 31.193 109 75 0 3 111 111 219 2.98e-15 73.6
Msa0865070 AT1G54960.2 31.193 109 75 0 3 111 111 219 2.98e-15 73.6
Msa0865070 AT5G35410.2 32.540 126 84 1 1 125 47 172 3.31e-15 73.2
Msa0865070 AT5G35410.1 32.540 126 84 1 1 125 47 172 3.47e-15 73.2
Msa0865070 AT5G10930.1 28.042 189 87 3 1 189 49 188 3.57e-15 73.2
Msa0865070 AT1G30270.1 30.909 110 76 0 1 110 67 176 3.92e-15 73.2
Msa0865070 AT1G30270.2 30.909 110 76 0 1 110 67 176 4.30e-15 73.2
Msa0865070 AT1G29230.1 33.945 109 71 1 1 109 110 217 5.24e-15 72.8
Msa0865070 AT2G26980.2 32.110 109 74 0 1 109 50 158 5.95e-15 71.6
Msa0865070 AT2G26980.4 31.818 110 75 0 1 110 60 169 8.54e-15 72.4
Msa0865070 AT2G26980.3 31.818 110 75 0 1 110 50 159 8.83e-15 72.0
Msa0865070 AT2G25090.1 26.344 186 96 2 4 189 55 199 8.90e-15 72.0
Msa0865070 AT2G26980.1 31.818 110 75 0 1 110 50 159 1.01e-14 72.0
Msa0865070 AT2G26980.5 32.110 109 74 0 1 109 50 158 1.01e-14 72.0
Msa0865070 AT1G49180.2 31.496 127 84 1 2 125 43 169 1.05e-14 71.6
Msa0865070 AT4G14580.1 29.091 165 69 2 25 189 82 198 1.07e-14 72.0
Msa0865070 AT1G49180.1 31.496 127 84 1 2 125 43 169 1.31e-14 71.6
Msa0865070 AT1G09000.1 30.275 109 76 0 3 111 112 220 2.71e-14 70.9
Msa0865070 AT5G58380.1 35.135 111 71 1 5 115 52 161 3.39e-14 70.5
Msa0865070 AT1G30270.3 41.667 72 42 0 38 109 7 78 3.51e-14 70.5
Msa0865070 AT3G01090.2 29.661 118 83 0 8 125 85 202 3.71e-14 70.5
Msa0865070 AT3G01090.3 29.661 118 83 0 8 125 62 179 4.18e-14 70.5
Msa0865070 AT3G01090.1 29.661 118 83 0 8 125 62 179 4.18e-14 70.5
Msa0865070 AT2G30360.1 33.000 100 67 0 10 109 67 166 5.95e-14 69.7
Msa0865070 AT1G09000.2 30.275 109 76 0 3 111 112 220 7.83e-14 69.7
Msa0865070 AT4G24100.1 31.373 102 68 1 10 109 76 177 1.12e-13 69.3
Msa0865070 AT4G24100.2 31.373 102 68 1 10 109 76 177 1.21e-13 68.9
Msa0865070 AT4G24100.4 31.373 102 68 1 10 109 92 193 1.21e-13 68.9
Msa0865070 AT4G24100.3 31.373 102 68 1 10 109 92 193 1.25e-13 68.9
Msa0865070 AT5G45820.1 28.108 185 84 3 5 189 52 187 1.26e-13 68.9
Msa0865070 AT2G25880.1 30.952 126 84 2 2 126 61 184 1.28e-13 68.2
Msa0865070 AT4G32830.1 30.952 126 84 2 2 126 67 190 1.33e-13 68.2
Msa0865070 AT2G25880.4 33.028 109 72 1 2 109 74 182 1.36e-13 68.2
Msa0865070 AT5G01810.1 34.862 109 70 1 1 109 48 155 1.42e-13 68.6
Msa0865070 AT5G01810.2 34.862 109 70 1 1 109 48 155 1.42e-13 68.6
Msa0865070 AT5G01810.3 34.862 109 70 1 1 109 48 155 1.44e-13 68.6
Msa0865070 AT4G10730.2 31.373 102 68 1 10 109 70 171 1.77e-13 68.6
Msa0865070 AT4G10730.1 31.373 102 68 1 10 109 90 191 1.78e-13 68.6
Msa0865070 AT2G25880.3 33.028 109 72 1 2 109 122 230 2.19e-13 67.8
Msa0865070 AT1G63700.1 32.110 109 74 0 3 111 440 548 2.25e-13 68.2
Msa0865070 AT1G63700.2 32.110 109 74 0 3 111 440 548 2.25e-13 68.2
Msa0865070 AT3G61960.1 27.586 116 81 1 13 125 57 172 2.66e-13 68.2
Msa0865070 AT3G61960.2 27.586 116 81 1 13 125 57 172 2.66e-13 68.2
Msa0865070 AT1G01140.1 25.263 190 91 2 7 193 61 202 2.74e-13 67.8
Msa0865070 AT1G01140.2 25.263 190 91 2 7 193 61 202 2.77e-13 67.8
Msa0865070 AT1G01140.3 25.263 190 91 2 7 193 61 202 2.78e-13 67.8
Msa0865070 AT5G14720.1 31.373 102 68 1 10 109 59 160 3.43e-13 67.8
Msa0865070 AT5G14720.2 31.373 102 68 1 10 109 59 160 3.43e-13 67.8
Msa0865070 AT5G21326.1 30.275 109 76 0 1 109 49 157 3.65e-13 67.4
Msa0865070 AT4G30960.1 27.322 183 84 3 7 189 66 199 4.26e-13 67.4
Msa0865070 AT3G29160.3 27.119 118 86 0 8 125 63 180 4.71e-13 67.0
Msa0865070 AT2G37840.1 28.926 121 83 1 8 125 54 174 5.57e-13 67.0
Msa0865070 AT3G29160.1 27.119 118 86 0 8 125 63 180 5.91e-13 67.0
Msa0865070 AT3G29160.2 27.119 118 86 0 8 125 63 180 5.91e-13 67.0
Msa0865070 AT5G21222.1 29.358 109 77 0 1 109 49 157 5.98e-13 67.0
Msa0865070 AT5G21222.2 29.358 109 77 0 1 109 49 157 5.98e-13 67.0
Msa0865070 AT5G21222.4 29.358 109 77 0 1 109 49 157 5.98e-13 67.0
Msa0865070 AT5G21222.3 29.358 109 77 0 1 109 49 157 5.98e-13 67.0
Msa0865070 AT3G25250.1 27.660 188 124 4 10 189 69 252 6.38e-13 66.6
Msa0865070 AT1G53570.4 33.945 109 72 0 3 111 254 362 6.51e-13 67.0
Msa0865070 AT1G53570.2 33.945 109 72 0 3 111 254 362 6.51e-13 67.0
Msa0865070 AT1G53570.3 33.945 109 72 0 3 111 254 362 6.51e-13 67.0
Msa0865070 AT1G53570.1 33.945 109 72 0 3 111 254 362 6.52e-13 67.0
Msa0865070 AT3G06030.1 29.358 109 77 0 3 111 111 219 8.90e-13 66.6
Msa0865070 AT1G70430.1 31.481 108 72 1 4 109 53 160 9.03e-13 66.6
Msa0865070 AT1G70430.4 31.481 108 72 1 4 109 53 160 9.05e-13 66.6
Msa0865070 AT1G70430.3 31.481 108 72 1 4 109 53 160 9.44e-13 66.2
Msa0865070 AT3G23000.1 36.047 86 55 0 25 110 86 171 9.91e-13 66.2
Msa0865070 AT4G14480.1 30.275 109 74 1 3 109 52 160 1.24e-12 65.9
Msa0865070 AT3G15220.1 34.951 103 67 0 11 113 59 161 1.44e-12 65.9
Msa0865070 AT1G53570.7 36.364 99 63 0 13 111 264 362 1.63e-12 65.9
Msa0865070 AT1G53570.6 36.364 99 63 0 13 111 264 362 1.66e-12 65.5
Msa0865070 AT1G69220.2 32.710 107 71 1 8 113 263 369 1.88e-12 65.5
Msa0865070 AT1G69220.1 32.710 107 71 1 8 113 290 396 2.42e-12 65.5
Msa0865070 AT2G34180.1 33.945 109 71 1 1 109 93 200 3.35e-12 64.7
Msa0865070 AT1G79640.2 34.314 102 65 1 10 109 56 157 3.37e-12 64.7
Msa0865070 AT1G79640.4 34.314 102 65 1 10 109 56 157 3.37e-12 64.7
Msa0865070 AT1G79640.3 34.314 102 65 1 10 109 56 157 3.37e-12 64.7
Msa0865070 AT1G79640.6 34.314 102 65 1 10 109 56 157 3.45e-12 64.7
Msa0865070 AT1G79640.5 34.314 102 65 1 10 109 59 160 3.47e-12 64.7
Msa0865070 AT1G79640.1 34.314 102 65 1 10 109 56 157 3.47e-12 64.7
Msa0865070 AT4G08500.1 31.429 105 71 1 7 111 376 479 9.97e-12 63.5
Msa0865070 AT1G66750.1 35.238 105 68 0 13 117 60 164 1.12e-11 62.8
Msa0865070 AT5G39440.1 27.723 101 73 0 25 125 79 179 2.49e-11 62.4
Msa0865070 AT2G38490.1 24.468 188 93 3 2 189 65 203 4.07e-11 61.6
Msa0865070 AT1G53165.1 33.981 103 68 0 11 113 59 161 4.21e-11 61.6
Msa0865070 AT1G53165.3 33.981 103 68 0 11 113 59 161 4.22e-11 61.6
Msa0865070 AT1G53165.2 33.981 103 68 0 11 113 59 161 4.25e-11 61.6

Find 41 sgRNAs with CRISPR-Local

Find 148 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACGTGAAATTATCAGATTT+TGG 0.253070 5_4:+65715814 Msa0865070:CDS
CCAGTTGCTGTTGTTGTGAT+TGG 0.300638 5_4:-65715966 None:intergenic
ATGTTTATGAATAGACTCTA+TGG 0.331837 5_4:-65715504 None:intergenic
CATGCCCGACAACTTGCTTC+TGG 0.340707 5_4:+65715780 Msa0865070:CDS
GATATTGCAGACCTATTCTA+TGG 0.348042 5_4:+65716405 Msa0865070:intron
GATGAAGCTAAATTCTATAT+CGG 0.354953 5_4:+65715467 Msa0865070:CDS
ATAAACATAATTATATTCAT+AGG 0.369736 5_4:+65715519 Msa0865070:CDS
AAAAGACTGCAGTAACCTTC+AGG 0.370471 5_4:+65715873 Msa0865070:CDS
ATTGCGAAAGAGTTAAATAA+TGG 0.386315 5_4:+65715128 Msa0865070:five_prime_UTR
GCTAGACTGCAGTAACCTTC+AGG 0.390289 5_4:+65715849 Msa0865070:CDS
ATGAAGCTAAATTCTATATC+GGG 0.407900 5_4:+65715468 Msa0865070:CDS
CCTCTCTTCAGAATAACTTC+TGG 0.412241 5_4:-65716451 None:intergenic
AAGCAAGTTCATCACTTTGA+AGG 0.415965 5_4:-65715933 None:intergenic
CCAATCACAACAACAGCAAC+TGG 0.416983 5_4:+65715966 Msa0865070:CDS
CGAGTATTTATATCTCATAA+TGG 0.455404 5_4:+65715385 Msa0865070:CDS
TGCTATCAACTTCTGCAAGA+AGG 0.478344 5_4:-65715325 None:intergenic
TGCTGTTGTTGTGATTGGTT+AGG 0.484482 5_4:-65715961 None:intergenic
TCTAATGGAGTTAACATAAG+TGG 0.486303 5_4:+65715907 Msa0865070:CDS
GAGTGTTCCAACCATAGAAT+AGG 0.493262 5_4:-65716416 None:intergenic
AACAGCAACTGGAGCATTCG+CGG 0.503673 5_4:+65715977 Msa0865070:CDS
TTGCAGACCTATTCTATGGT+TGG 0.514187 5_4:+65716409 Msa0865070:intron
CTATCCAGAAGCAAGTTGTC+GGG 0.515263 5_4:-65715784 None:intergenic
TAAATACTCGTCATCTTGAA+AGG 0.518616 5_4:-65715372 None:intergenic
CAACGTCATCATATCTCCAC+CGG 0.521802 5_4:-65715417 None:intergenic
TCTATCCAGAAGCAAGTTGT+CGG 0.524432 5_4:-65715785 None:intergenic
AGCATCTCTGATTTAACTCA+CGG 0.528343 5_4:-65715186 None:intergenic
CTCATAATGGAGTATCTACC+CGG 0.543468 5_4:+65715398 Msa0865070:CDS
AACTTGCTTCTGGATAGAAA+TGG 0.545939 5_4:+65715790 Msa0865070:CDS
AGAGATGCTTAGTAGAGGAC+AGG 0.546069 5_4:+65715200 Msa0865070:exon
CCAGAAGTTATTCTGAAGAG+AGG 0.595321 5_4:+65716451 Msa0865070:CDS
CAGAAGTTATTCTGAAGAGA+GGG 0.602815 5_4:+65716452 Msa0865070:CDS
TCTTTCGCAATGTGAAACTC+CGG 0.605862 5_4:-65715116 None:intergenic
TTCGCAATGTGAAACTCCGG+AGG 0.606544 5_4:-65715113 None:intergenic
TTGAATATATCAAATCTGAA+AGG 0.615218 5_4:+65715300 Msa0865070:CDS
ATATGATGACGTTGCTGATG+CGG 0.617376 5_4:+65715426 Msa0865070:CDS
TGAAGGTTACTGCAGTCTAG+CGG 0.630065 5_4:-65715847 None:intergenic
AAATCAGAGATGCTTAGTAG+AGG 0.631650 5_4:+65715195 Msa0865070:exon
TGAAGCTAAATTCTATATCG+GGG 0.655322 5_4:+65715469 Msa0865070:CDS
AACGTCATCATATCTCCACC+GGG 0.657380 5_4:-65715416 None:intergenic
TCGCAATGTGAAACTCCGGA+GGG 0.678985 5_4:-65715112 None:intergenic
ATAATGGAGTATCTACCCGG+TGG 0.717919 5_4:+65715401 Msa0865070:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAACATAATTATATTCAT+AGG + chr5_4:65715519-65715538 Msa0865070:CDS 10.0%
!!! TTTTTATTATAACTGAAAAA+AGG - chr5_4:65716177-65716196 None:intergenic 10.0%
!! ATAAACATAATTATATTCAT+AGG + chr5_4:65715519-65715538 Msa0865070:CDS 10.0%
!!! TTTTTATTATAACTGAAAAA+AGG - chr5_4:65716177-65716196 None:intergenic 10.0%
!!! ATTATTTTCTTTTACTTATC+AGG + chr5_4:65715255-65715274 Msa0865070:intron 15.0%
!! TAGCAAACTTTATTATAAAA+CGG + chr5_4:65716075-65716094 Msa0865070:intron 15.0%
!! ATTTACATCATATATCAATT+TGG + chr5_4:65716276-65716295 Msa0865070:intron 15.0%
!! TTTACATCATATATCAATTT+GGG + chr5_4:65716277-65716296 Msa0865070:intron 15.0%
!!! ATTATTTTCTTTTACTTATC+AGG + chr5_4:65715255-65715274 Msa0865070:intron 15.0%
!! TAGCAAACTTTATTATAAAA+CGG + chr5_4:65716075-65716094 Msa0865070:intron 15.0%
!! ATTTACATCATATATCAATT+TGG + chr5_4:65716276-65716295 Msa0865070:intron 15.0%
!! TTTACATCATATATCAATTT+GGG + chr5_4:65716277-65716296 Msa0865070:intron 15.0%
!! TTGAATATATCAAATCTGAA+AGG + chr5_4:65715300-65715319 Msa0865070:CDS 20.0%
!! TATGATTACTTTATTCAAAG+CGG + chr5_4:65716145-65716164 Msa0865070:intron 20.0%
!! TTGAATATATCAAATCTGAA+AGG + chr5_4:65715300-65715319 Msa0865070:CDS 20.0%
!! TATGATTACTTTATTCAAAG+CGG + chr5_4:65716145-65716164 Msa0865070:intron 20.0%
! ATTGCGAAAGAGTTAAATAA+TGG + chr5_4:65715128-65715147 Msa0865070:five_prime_UTR 25.0%
!!! GTGCTTTTATGTTTTTGATT+AGG + chr5_4:65715277-65715296 Msa0865070:intron 25.0%
! CGAGTATTTATATCTCATAA+TGG + chr5_4:65715385-65715404 Msa0865070:CDS 25.0%
! GATGAAGCTAAATTCTATAT+CGG + chr5_4:65715467-65715486 Msa0865070:CDS 25.0%
! ATGAAGCTAAATTCTATATC+GGG + chr5_4:65715468-65715487 Msa0865070:CDS 25.0%
! ATGTTTATGAATAGACTCTA+TGG - chr5_4:65715507-65715526 None:intergenic 25.0%
! GCTACAATCTTATACTAAAT+AGG - chr5_4:65715581-65715600 None:intergenic 25.0%
! AGTGATTTCGTTGAAAATAA+CGG - chr5_4:65715623-65715642 None:intergenic 25.0%
! AATTATCAGTGTTAGATTGT+AGG + chr5_4:65715653-65715672 Msa0865070:intron 25.0%
! ATTATCAGTGTTAGATTGTA+GGG + chr5_4:65715654-65715673 Msa0865070:intron 25.0%
!! TTATAACTGAAAAAAGGTGT+AGG - chr5_4:65716171-65716190 None:intergenic 25.0%
! CATTATTCTTTCGTTATGTT+TGG + chr5_4:65716203-65716222 Msa0865070:intron 25.0%
!!! TCTTTCGTGATATTTTTGTT+TGG + chr5_4:65716234-65716253 Msa0865070:intron 25.0%
! AAAGAGAGAATAGTCTTTAA+AGG - chr5_4:65716322-65716341 None:intergenic 25.0%
!!! TATTCTCTCTTTTGATTGTA+TGG + chr5_4:65716330-65716349 Msa0865070:intron 25.0%
! GTGATTGGTATAATAGTATA+TGG + chr5_4:65716488-65716507 Msa0865070:intron 25.0%
! ATTGCGAAAGAGTTAAATAA+TGG + chr5_4:65715128-65715147 Msa0865070:five_prime_UTR 25.0%
!!! GTGCTTTTATGTTTTTGATT+AGG + chr5_4:65715277-65715296 Msa0865070:intron 25.0%
! CGAGTATTTATATCTCATAA+TGG + chr5_4:65715385-65715404 Msa0865070:CDS 25.0%
! GATGAAGCTAAATTCTATAT+CGG + chr5_4:65715467-65715486 Msa0865070:CDS 25.0%
! ATGAAGCTAAATTCTATATC+GGG + chr5_4:65715468-65715487 Msa0865070:CDS 25.0%
! ATGTTTATGAATAGACTCTA+TGG - chr5_4:65715507-65715526 None:intergenic 25.0%
! GCTACAATCTTATACTAAAT+AGG - chr5_4:65715581-65715600 None:intergenic 25.0%
! AGTGATTTCGTTGAAAATAA+CGG - chr5_4:65715623-65715642 None:intergenic 25.0%
! AATTATCAGTGTTAGATTGT+AGG + chr5_4:65715653-65715672 Msa0865070:intron 25.0%
! ATTATCAGTGTTAGATTGTA+GGG + chr5_4:65715654-65715673 Msa0865070:intron 25.0%
!! TTATAACTGAAAAAAGGTGT+AGG - chr5_4:65716171-65716190 None:intergenic 25.0%
! CATTATTCTTTCGTTATGTT+TGG + chr5_4:65716203-65716222 Msa0865070:intron 25.0%
!!! TCTTTCGTGATATTTTTGTT+TGG + chr5_4:65716234-65716253 Msa0865070:intron 25.0%
! AAAGAGAGAATAGTCTTTAA+AGG - chr5_4:65716322-65716341 None:intergenic 25.0%
!!! TATTCTCTCTTTTGATTGTA+TGG + chr5_4:65716330-65716349 Msa0865070:intron 25.0%
! GTGATTGGTATAATAGTATA+TGG + chr5_4:65716488-65716507 Msa0865070:intron 25.0%
TAAATACTCGTCATCTTGAA+AGG - chr5_4:65715375-65715394 None:intergenic 30.0%
TGAAGCTAAATTCTATATCG+GGG + chr5_4:65715469-65715488 Msa0865070:CDS 30.0%
! CAACGAAATCACTATTGTTT+TGG + chr5_4:65715630-65715649 Msa0865070:intron 30.0%
! CACGTGAAATTATCAGATTT+TGG + chr5_4:65715814-65715833 Msa0865070:CDS 30.0%
! TAGATAAGTCTTTTTCCTGA+AGG - chr5_4:65715891-65715910 None:intergenic 30.0%
CAGGAAAAAGACTTATCTAA+TGG + chr5_4:65715892-65715911 Msa0865070:CDS 30.0%
TCTAATGGAGTTAACATAAG+TGG + chr5_4:65715907-65715926 Msa0865070:CDS 30.0%
GAATAAGTGAATAACTTCTC+AGG + chr5_4:65716542-65716561 Msa0865070:intron 30.0%
TAAATACTCGTCATCTTGAA+AGG - chr5_4:65715375-65715394 None:intergenic 30.0%
TGAAGCTAAATTCTATATCG+GGG + chr5_4:65715469-65715488 Msa0865070:CDS 30.0%
! CAACGAAATCACTATTGTTT+TGG + chr5_4:65715630-65715649 Msa0865070:intron 30.0%
! CACGTGAAATTATCAGATTT+TGG + chr5_4:65715814-65715833 Msa0865070:CDS 30.0%
! TAGATAAGTCTTTTTCCTGA+AGG - chr5_4:65715891-65715910 None:intergenic 30.0%
CAGGAAAAAGACTTATCTAA+TGG + chr5_4:65715892-65715911 Msa0865070:CDS 30.0%
TCTAATGGAGTTAACATAAG+TGG + chr5_4:65715907-65715926 Msa0865070:CDS 30.0%
GAATAAGTGAATAACTTCTC+AGG + chr5_4:65716542-65716561 Msa0865070:intron 30.0%
AGCATCTCTGATTTAACTCA+CGG - chr5_4:65715189-65715208 None:intergenic 35.0%
AAATCAGAGATGCTTAGTAG+AGG + chr5_4:65715195-65715214 Msa0865070:exon 35.0%
CATGAATACCTCTGAATGAT+CGG - chr5_4:65715710-65715729 None:intergenic 35.0%
! AACTTGCTTCTGGATAGAAA+TGG + chr5_4:65715790-65715809 Msa0865070:CDS 35.0%
AAGCAAGTTCATCACTTTGA+AGG - chr5_4:65715936-65715955 None:intergenic 35.0%
CTTTCGTTATGTTTGGACTT+CGG + chr5_4:65716210-65716229 Msa0865070:intron 35.0%
GATATTGCAGACCTATTCTA+TGG + chr5_4:65716405-65716424 Msa0865070:intron 35.0%
! CAGAAGTTATTCTGAAGAGA+GGG + chr5_4:65716452-65716471 Msa0865070:CDS 35.0%
AGCATCTCTGATTTAACTCA+CGG - chr5_4:65715189-65715208 None:intergenic 35.0%
AAATCAGAGATGCTTAGTAG+AGG + chr5_4:65715195-65715214 Msa0865070:exon 35.0%
CATGAATACCTCTGAATGAT+CGG - chr5_4:65715710-65715729 None:intergenic 35.0%
! AACTTGCTTCTGGATAGAAA+TGG + chr5_4:65715790-65715809 Msa0865070:CDS 35.0%
AAGCAAGTTCATCACTTTGA+AGG - chr5_4:65715936-65715955 None:intergenic 35.0%
CTTTCGTTATGTTTGGACTT+CGG + chr5_4:65716210-65716229 Msa0865070:intron 35.0%
GATATTGCAGACCTATTCTA+TGG + chr5_4:65716405-65716424 Msa0865070:intron 35.0%
! CAGAAGTTATTCTGAAGAGA+GGG + chr5_4:65716452-65716471 Msa0865070:CDS 35.0%
! AGATGTCTTTCTTTTCCCTC+CGG + chr5_4:65715097-65715116 Msa0865070:five_prime_UTR 40.0%
TCTTTCGCAATGTGAAACTC+CGG - chr5_4:65715119-65715138 None:intergenic 40.0%
TGCTATCAACTTCTGCAAGA+AGG - chr5_4:65715328-65715347 None:intergenic 40.0%
! CTCATAATGGAGTATCTACC+CGG + chr5_4:65715398-65715417 Msa0865070:CDS 40.0%
! ATATGATGACGTTGCTGATG+CGG + chr5_4:65715426-65715445 Msa0865070:CDS 40.0%
GGGTACTTAACTTTACGACA+TGG + chr5_4:65715674-65715693 Msa0865070:intron 40.0%
CTTGAATACCGATCATTCAG+AGG + chr5_4:65715699-65715718 Msa0865070:intron 40.0%
TCTATCCAGAAGCAAGTTGT+CGG - chr5_4:65715788-65715807 None:intergenic 40.0%
! TACTGCAGTCTTTTTCCTGA+AGG - chr5_4:65715867-65715886 None:intergenic 40.0%
AAAAGACTGCAGTAACCTTC+AGG + chr5_4:65715873-65715892 Msa0865070:CDS 40.0%
! TGCTGTTGTTGTGATTGGTT+AGG - chr5_4:65715964-65715983 None:intergenic 40.0%
TTGCAGACCTATTCTATGGT+TGG + chr5_4:65716409-65716428 Msa0865070:intron 40.0%
GAGTGTTCCAACCATAGAAT+AGG - chr5_4:65716419-65716438 None:intergenic 40.0%
CCTCTCTTCAGAATAACTTC+TGG - chr5_4:65716454-65716473 None:intergenic 40.0%
! CCAGAAGTTATTCTGAAGAG+AGG + chr5_4:65716451-65716470 Msa0865070:CDS 40.0%
! GTTATTCTGAAGAGAGGGTA+TGG + chr5_4:65716457-65716476 Msa0865070:intron 40.0%
! AGTATATGGCGTTGAAAGCT+TGG + chr5_4:65716502-65716521 Msa0865070:intron 40.0%
! AGATGTCTTTCTTTTCCCTC+CGG + chr5_4:65715097-65715116 Msa0865070:five_prime_UTR 40.0%
TCTTTCGCAATGTGAAACTC+CGG - chr5_4:65715119-65715138 None:intergenic 40.0%
TGCTATCAACTTCTGCAAGA+AGG - chr5_4:65715328-65715347 None:intergenic 40.0%
! CTCATAATGGAGTATCTACC+CGG + chr5_4:65715398-65715417 Msa0865070:CDS 40.0%
! ATATGATGACGTTGCTGATG+CGG + chr5_4:65715426-65715445 Msa0865070:CDS 40.0%
GGGTACTTAACTTTACGACA+TGG + chr5_4:65715674-65715693 Msa0865070:intron 40.0%
CTTGAATACCGATCATTCAG+AGG + chr5_4:65715699-65715718 Msa0865070:intron 40.0%
TCTATCCAGAAGCAAGTTGT+CGG - chr5_4:65715788-65715807 None:intergenic 40.0%
! TACTGCAGTCTTTTTCCTGA+AGG - chr5_4:65715867-65715886 None:intergenic 40.0%
AAAAGACTGCAGTAACCTTC+AGG + chr5_4:65715873-65715892 Msa0865070:CDS 40.0%
! TGCTGTTGTTGTGATTGGTT+AGG - chr5_4:65715964-65715983 None:intergenic 40.0%
TTGCAGACCTATTCTATGGT+TGG + chr5_4:65716409-65716428 Msa0865070:intron 40.0%
GAGTGTTCCAACCATAGAAT+AGG - chr5_4:65716419-65716438 None:intergenic 40.0%
CCTCTCTTCAGAATAACTTC+TGG - chr5_4:65716454-65716473 None:intergenic 40.0%
! CCAGAAGTTATTCTGAAGAG+AGG + chr5_4:65716451-65716470 Msa0865070:CDS 40.0%
! GTTATTCTGAAGAGAGGGTA+TGG + chr5_4:65716457-65716476 Msa0865070:intron 40.0%
! AGTATATGGCGTTGAAAGCT+TGG + chr5_4:65716502-65716521 Msa0865070:intron 40.0%
AGAGATGCTTAGTAGAGGAC+AGG + chr5_4:65715200-65715219 Msa0865070:exon 45.0%
GCTTAGTAGAGGACAGGTAT+TGG + chr5_4:65715206-65715225 Msa0865070:intron 45.0%
! ATAATGGAGTATCTACCCGG+TGG + chr5_4:65715401-65715420 Msa0865070:CDS 45.0%
AACGTCATCATATCTCCACC+GGG - chr5_4:65715419-65715438 None:intergenic 45.0%
CAACGTCATCATATCTCCAC+CGG - chr5_4:65715420-65715439 None:intergenic 45.0%
CTATCCAGAAGCAAGTTGTC+GGG - chr5_4:65715787-65715806 None:intergenic 45.0%
TGAAGGTTACTGCAGTCTAG+CGG - chr5_4:65715850-65715869 None:intergenic 45.0%
! CCAGTTGCTGTTGTTGTGAT+TGG - chr5_4:65715969-65715988 None:intergenic 45.0%
CCAATCACAACAACAGCAAC+TGG + chr5_4:65715966-65715985 Msa0865070:CDS 45.0%
GAAAAATCGCAGCAGAATGC+TGG + chr5_4:65715999-65716018 Msa0865070:CDS 45.0%
AGAGATGCTTAGTAGAGGAC+AGG + chr5_4:65715200-65715219 Msa0865070:exon 45.0%
GCTTAGTAGAGGACAGGTAT+TGG + chr5_4:65715206-65715225 Msa0865070:intron 45.0%
! ATAATGGAGTATCTACCCGG+TGG + chr5_4:65715401-65715420 Msa0865070:CDS 45.0%
AACGTCATCATATCTCCACC+GGG - chr5_4:65715419-65715438 None:intergenic 45.0%
CAACGTCATCATATCTCCAC+CGG - chr5_4:65715420-65715439 None:intergenic 45.0%
CTATCCAGAAGCAAGTTGTC+GGG - chr5_4:65715787-65715806 None:intergenic 45.0%
TGAAGGTTACTGCAGTCTAG+CGG - chr5_4:65715850-65715869 None:intergenic 45.0%
! CCAGTTGCTGTTGTTGTGAT+TGG - chr5_4:65715969-65715988 None:intergenic 45.0%
CCAATCACAACAACAGCAAC+TGG + chr5_4:65715966-65715985 Msa0865070:CDS 45.0%
GAAAAATCGCAGCAGAATGC+TGG + chr5_4:65715999-65716018 Msa0865070:CDS 45.0%
TCGCAATGTGAAACTCCGGA+GGG - chr5_4:65715115-65715134 None:intergenic 50.0%
TTCGCAATGTGAAACTCCGG+AGG - chr5_4:65715116-65715135 None:intergenic 50.0%
GCTAGACTGCAGTAACCTTC+AGG + chr5_4:65715849-65715868 Msa0865070:CDS 50.0%
! AACAGCAACTGGAGCATTCG+CGG + chr5_4:65715977-65715996 Msa0865070:CDS 50.0%
GGTATGGCGTGGAATGTGAT+TGG + chr5_4:65716473-65716492 Msa0865070:intron 50.0%
TCGCAATGTGAAACTCCGGA+GGG - chr5_4:65715115-65715134 None:intergenic 50.0%
TTCGCAATGTGAAACTCCGG+AGG - chr5_4:65715116-65715135 None:intergenic 50.0%
GCTAGACTGCAGTAACCTTC+AGG + chr5_4:65715849-65715868 Msa0865070:CDS 50.0%
! AACAGCAACTGGAGCATTCG+CGG + chr5_4:65715977-65715996 Msa0865070:CDS 50.0%
GGTATGGCGTGGAATGTGAT+TGG + chr5_4:65716473-65716492 Msa0865070:intron 50.0%
! CATGCCCGACAACTTGCTTC+TGG + chr5_4:65715780-65715799 Msa0865070:CDS 55.0%
! TCTGAAGAGAGGGTATGGCG+TGG + chr5_4:65716462-65716481 Msa0865070:intron 55.0%
! CATGCCCGACAACTTGCTTC+TGG + chr5_4:65715780-65715799 Msa0865070:CDS 55.0%
! TCTGAAGAGAGGGTATGGCG+TGG + chr5_4:65716462-65716481 Msa0865070:intron 55.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 65715076 65716585 65715076 ID=Msa0865070;Name=Msa0865070
chr5_4 mRNA 65715076 65716585 65715076 ID=Msa0865070-mRNA-1;Parent=Msa0865070;Name=Msa0865070-mRNA-1;_AED=0.35;_eAED=0.35;_QI=128|0.25|0.2|0.4|1|1|5|0|195
chr5_4 exon 65715076 65715221 65715076 ID=Msa0865070-mRNA-1:exon:20761;Parent=Msa0865070-mRNA-1
chr5_4 exon 65715299 65715540 65715299 ID=Msa0865070-mRNA-1:exon:20762;Parent=Msa0865070-mRNA-1
chr5_4 exon 65715774 65716020 65715774 ID=Msa0865070-mRNA-1:exon:20763;Parent=Msa0865070-mRNA-1
chr5_4 exon 65716415 65716473 65716415 ID=Msa0865070-mRNA-1:exon:20764;Parent=Msa0865070-mRNA-1
chr5_4 exon 65716564 65716585 65716564 ID=Msa0865070-mRNA-1:exon:20765;Parent=Msa0865070-mRNA-1
chr5_4 five_prime_UTR 65715076 65715203 65715076 ID=Msa0865070-mRNA-1:five_prime_utr;Parent=Msa0865070-mRNA-1
chr5_4 CDS 65715204 65715221 65715204 ID=Msa0865070-mRNA-1:cds;Parent=Msa0865070-mRNA-1
chr5_4 CDS 65715299 65715540 65715299 ID=Msa0865070-mRNA-1:cds;Parent=Msa0865070-mRNA-1
chr5_4 CDS 65715774 65716020 65715774 ID=Msa0865070-mRNA-1:cds;Parent=Msa0865070-mRNA-1
chr5_4 CDS 65716415 65716473 65716415 ID=Msa0865070-mRNA-1:cds;Parent=Msa0865070-mRNA-1
chr5_4 CDS 65716564 65716585 65716564 ID=Msa0865070-mRNA-1:cds;Parent=Msa0865070-mRNA-1
Gene Sequence

>Msa0865070

ATGCTTAGTAGAGGACAGGTTGAATATATCAAATCTGAAAGGAACCTTCTTGCAGAAGTTGATAGCAATTGCATTGTAAAACTTTATTGTTCCTTTCAAGATGACGAGTATTTATATCTCATAATGGAGTATCTACCCGGTGGAGATATGATGACGTTGCTGATGCGGAATGAAGTACTGACTGAAGATGAAGCTAAATTCTATATCGGGGAGACTGTGCTAGCCATAGAGTCTATTCATAAACATAATTATATTCATAGAGATATCATGCCCGACAACTTGCTTCTGGATAGAAATGGTCACGTGAAATTATCAGATTTTGGATTATGTAAGCCGCTAGACTGCAGTAACCTTCAGGAAAAAGACTGCAGTAACCTTCAGGAAAAAGACTTATCTAATGGAGTTAACATAAGTGGAGTCCTTCAAAGTGATGAACTTGCTTTATCTCCTAACCAATCACAACAACAGCAACTGGAGCATTCGCGGAAAAATCGCAGCAGAATGCTGACCTATTCTATGGTTGGAACACTCGATTATATTGCTCCAGAAGTTATTCTGAAGAGAGGGTCTGCTGCTGATAATCTCTAA
Protein sequence

>Msa0865070

MLSRGQVEYIKSERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRNEVLTEDEAKFYIGETVLAIESIHKHNYIHRDIMPDNLLLDRNGHVKLSDFGLCKPLDCSNLQEKDCSNLQEKDLSNGVNISGVLQSDELALSPNQSQQQQLEHSRKNRSRMLTYSMVGTLDYIAPEVILKRGSAADNL*