AlfalfaGEDB | Msa0811140

M. sativa cultivar zhongmu-4 / Msa0811140

KEGG: K08790|K20069
GO: GO:0000166 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007275 GO:0007399 GO:0008144 GO:0008150 GO:0008152 GO:0009987 GO:0010975 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017076 GO:0019538 GO:0022008 GO:0023052 GO:0030154 GO:0030554 GO:0031344 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0035556 GO:0035639 GO:0036094 GO:0036211 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045595 GO:0045664 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050767 GO:0050773 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051128 GO:0051239 GO:0051716 GO:0051960 GO:0060284 GO:0065007 GO:0071704 GO:0097159 GO:0097367 GO:0120035 GO:0140096 GO:1901265 GO:1901363 GO:1901564 GO:2000026
PFAM: PF00069.28

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0811140	XP_039690476.1	89.418	189	12	1	1	189	151	331	1.17e-114	346

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0811140	sp\|Q5AP53\|CBK1_CANAL	51.515	198	81	5	1	189	371	562	2.02e-55	189

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0811140	G7I4M5	89.418	189	12	1	1	189	151	331	5.60e-115	346

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0091590	Msa0811140	0.909211	7.320739e-82	-8.615850e-47
Msa0731260	Msa0811140	0.892954	9.855348e-75	-8.615850e-47
Msa0771270	Msa0811140	0.893276	7.307823e-75	-8.615850e-47
Msa0811140	Msa0865070	0.899856	1.308972e-77	-8.615850e-47
Msa0283630	Msa0811140	0.869826	2.313353e-66	-8.615850e-47
Msa0333590	Msa0811140	0.926539	4.082870e-91	-8.615850e-47
Msa0546530	Msa0811140	0.893347	6.838354e-75	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0811140	MtrunA17_Chr1g0167311	89.418	189	12	1	1	189	151	331	1.08e-118	346
Msa0811140	MtrunA17_Chr1g0167351	82.540	189	25	1	1	189	146	326	1.21e-109	323
Msa0811140	MtrunA17_Chr1g0187581	74.603	189	39	2	1	189	153	332	1.18e-99	298
Msa0811140	MtrunA17_Chr1g0183651	73.545	189	40	3	1	189	156	334	5.10e-96	289
Msa0811140	MtrunA17_Chr7g0261491	74.074	189	39	3	1	189	156	334	2.54e-95	288
Msa0811140	MtrunA17_Chr2g0299781	61.500	200	62	4	1	193	149	340	4.75e-77	239
Msa0811140	MtrunA17_Chr3g0135951	61.579	190	70	3	1	189	130	317	4.94e-76	236
Msa0811140	MtrunA17_Chr1g0153321	61.376	189	65	3	1	189	144	324	7.58e-74	231
Msa0811140	MtrunA17_Chr6g0478601	38.860	193	95	4	1	191	147	318	3.38e-33	124
Msa0811140	MtrunA17_Chr4g0018201	40.201	199	89	6	1	193	795	969	9.36e-33	124
Msa0811140	MtrunA17_Chr5g0428981	39.698	199	90	6	1	193	799	973	1.33e-32	123
Msa0811140	MtrunA17_Chr1g0197721	45.133	113	62	0	6	118	92	204	1.63e-27	108
Msa0811140	MtrunA17_Chr4g0059751	37.008	127	80	0	1	127	132	258	2.58e-26	103
Msa0811140	MtrunA17_Chr4g0030361	34.975	203	90	6	1	193	345	515	1.65e-24	100
Msa0811140	MtrunA17_Chr2g0309421	31.416	226	115	7	1	193	213	431	9.18e-24	97.8
Msa0811140	MtrunA17_Chr7g0245031	33.858	127	84	0	1	127	184	310	5.14e-23	95.5
Msa0811140	MtrunA17_Chr2g0327561	41.176	119	63	2	1	112	664	782	8.68e-23	95.1
Msa0811140	MtrunA17_Chr8g0369091	40.336	119	64	2	1	112	635	753	1.63e-22	94.4
Msa0811140	MtrunA17_Chr1g0179101	27.700	213	130	3	4	192	511	723	3.47e-20	87.8
Msa0811140	MtrunA17_Chr8g0335351	29.778	225	120	6	1	193	408	626	4.53e-20	87.4
Msa0811140	MtrunA17_Chr7g0227331	35.606	132	78	3	3	129	272	401	5.47e-20	87.0
Msa0811140	MtrunA17_Chr7g0266031	28.241	216	125	5	4	192	533	745	6.01e-19	84.0
Msa0811140	MtrunA17_Chr2g0312641	27.749	191	129	3	1	189	132	315	7.93e-19	83.6
Msa0811140	MtrunA17_Chr7g0250631	37.615	109	66	1	3	109	404	512	1.05e-18	83.2
Msa0811140	MtrunA17_Chr2g0290691	35.135	111	70	1	1	109	242	352	1.60e-18	82.8
Msa0811140	MtrunA17_Chr8g0356291	27.149	221	131	5	1	193	165	383	2.27e-18	82.4
Msa0811140	MtrunA17_Chr1g0188991	37.864	103	62	1	10	110	58	160	8.86e-18	80.5
Msa0811140	MtrunA17_Chr3g0080101	26.977	215	131	4	1	189	453	667	1.82e-17	79.7
Msa0811140	MtrunA17_Chr2g0321101	33.333	111	72	1	1	109	130	240	3.69e-17	78.6
Msa0811140	MtrunA17_Chr4g0013131	28.042	189	87	3	1	189	48	187	4.84e-17	78.2
Msa0811140	MtrunA17_Chr4g0063311	28.319	226	119	6	4	193	137	355	8.03e-17	77.8
Msa0811140	MtrunA17_Chr4g0074111	28.042	189	87	4	1	189	54	193	1.17e-16	77.0
Msa0811140	MtrunA17_Chr2g0284031	36.697	109	68	1	1	109	67	174	2.89e-16	76.3
Msa0811140	MtrunA17_Chr2g0304111	26.455	189	91	3	1	189	59	199	4.22e-16	75.5
Msa0811140	MtrunA17_Chr8g0379091	35.780	109	69	1	1	109	62	169	4.78e-16	75.5
Msa0811140	MtrunA17_Chr3g0125381	31.792	173	66	5	25	195	12	134	7.13e-16	72.8
Msa0811140	MtrunA17_Chr2g0286501	32.727	110	74	0	4	113	82	191	1.22e-15	74.7
Msa0811140	MtrunA17_Chr3g0140631	31.746	126	83	2	2	126	73	196	1.85e-15	72.8
Msa0811140	MtrunA17_Chr4g0063881	34.862	109	71	0	1	109	47	155	2.44e-15	73.6
Msa0811140	MtrunA17_Chr2g0285711	27.957	186	114	4	13	184	137	316	3.03e-15	73.2
Msa0811140	MtrunA17_Chr8g0351491	41.176	85	50	0	25	109	76	160	4.12e-15	71.6
Msa0811140	MtrunA17_Chr8g0338741	25.871	201	129	5	5	189	70	266	6.51e-15	72.0
Msa0811140	MtrunA17_Chr2g0284011	28.042	189	87	4	1	189	48	187	8.02e-15	72.0
Msa0811140	MtrunA17_Chr3g0107011	33.945	109	71	1	1	109	50	157	9.97e-15	71.6
Msa0811140	MtrunA17_Chr7g0244521	28.108	185	84	3	5	189	52	187	1.00e-14	71.6
Msa0811140	MtrunA17_Chr2g0330211	31.624	117	78	1	3	117	55	171	1.26e-14	71.2
Msa0811140	MtrunA17_Chr6g0453681	28.814	118	84	0	8	125	62	179	1.31e-14	71.2
Msa0811140	MtrunA17_Chr7g0234641	24.747	198	136	3	5	189	60	257	1.35e-14	71.2
Msa0811140	MtrunA17_Chr6g0468751	28.814	118	84	0	8	125	62	179	1.52e-14	71.2
Msa0811140	MtrunA17_Chr8g0381091	28.426	197	121	6	13	193	133	325	1.93e-14	70.9
Msa0811140	MtrunA17_Chr8g0346071	30.909	110	76	0	1	110	53	162	1.95e-14	70.9
Msa0811140	MtrunA17_Chr1g0188031	37.647	85	53	0	25	109	82	166	2.23e-14	70.5
Msa0811140	MtrunA17_Chr5g0432491	25.134	187	92	3	3	189	61	199	3.08e-14	70.1
Msa0811140	MtrunA17_Chr8g0386981	34.862	109	71	0	3	111	448	556	3.49e-14	70.5
Msa0811140	MtrunA17_Chr4g0032761	23.618	199	128	5	11	185	68	266	4.47e-14	69.7
Msa0811140	MtrunA17_Chr7g0272841	30.275	109	76	0	3	111	111	219	4.84e-14	69.7
Msa0811140	MtrunA17_Chr8g0353621	38.824	85	52	0	25	109	70	154	5.38e-14	68.6
Msa0811140	MtrunA17_Chr2g0317001	33.645	107	71	0	7	113	55	161	9.04e-14	68.9
Msa0811140	MtrunA17_Chr8g0346081	30.275	109	76	0	1	109	53	161	9.37e-14	68.9
Msa0811140	MtrunA17_Chr5g0419441	33.913	115	73	2	2	113	272	386	1.17e-13	68.6
Msa0811140	MtrunA17_Chr1g0205421	25.926	189	91	4	1	189	48	187	1.23e-13	68.6
Msa0811140	MtrunA17_Chr7g0274941	37.647	85	51	2	25	108	77	160	1.43e-13	67.8
Msa0811140	MtrunA17_Chr5g0441011	26.455	189	91	3	1	189	49	189	1.44e-13	68.2
Msa0811140	MtrunA17_Chr5g0428031	32.203	118	74	1	10	127	54	165	1.89e-13	67.8
Msa0811140	MtrunA17_Chr3g0107051	25.405	185	89	3	5	189	61	196	2.71e-13	67.4
Msa0811140	MtrunA17_Chr5g0432471	26.087	184	87	3	6	189	53	187	2.82e-13	67.4
Msa0811140	MtrunA17_Chr4g0008561	30.579	121	81	1	8	125	61	181	3.67e-13	67.4
Msa0811140	MtrunA17_Chr3g0132671	28.448	116	83	0	10	125	94	209	3.96e-13	67.0
Msa0811140	MtrunA17_Chr3g0130151	32.174	115	78	0	3	117	284	398	5.74e-13	66.6
Msa0811140	MtrunA17_Chr6g0450571	30.392	102	69	1	10	109	59	160	6.80e-13	66.6
Msa0811140	MtrunA17_Chr3g0114511	33.028	109	70	1	1	109	68	173	7.98e-13	66.2
Msa0811140	MtrunA17_Chr3g0129721	31.034	116	77	1	13	125	72	187	9.71e-13	65.1
Msa0811140	MtrunA17_Chr6g0453671	27.731	119	86	0	8	126	62	180	1.14e-12	65.5
Msa0811140	MtrunA17_Chr4g0000431	32.353	102	67	1	10	109	67	168	1.31e-12	65.5
Msa0811140	MtrunA17_Chr1g0202831	34.314	102	67	0	10	111	458	559	1.40e-12	65.5
Msa0811140	MtrunA17_Chr8g0345801	27.586	116	81	1	13	125	62	177	1.51e-12	64.3
Msa0811140	MtrunA17_Chr4g0001331	34.951	103	66	1	7	109	62	163	1.68e-12	65.1
Msa0811140	MtrunA17_Chr5g0424651	28.448	116	82	1	4	119	361	475	2.80e-12	64.7
Msa0811140	MtrunA17_Chr1g0150321	27.568	185	85	4	5	189	53	188	1.09e-11	62.8
Msa0811140	MtrunA17_Chr5g0424501	29.204	113	79	1	7	119	235	346	1.16e-11	62.8
Msa0811140	MtrunA17_Chr5g0424581	29.091	110	77	1	10	119	171	279	1.23e-11	62.4
Msa0811140	MtrunA17_Chr2g0326531	35.000	80	52	0	38	117	200	279	2.25e-11	62.0
Msa0811140	MtrunA17_Chr3g0091291	32.323	99	66	1	11	109	6	103	2.39e-11	60.5
Msa0811140	MtrunA17_Chr1g0166101	36.471	85	54	0	25	109	85	169	2.53e-11	61.6
Msa0811140	MtrunA17_Chr8g0384301	32.110	109	74	0	3	111	339	447	2.64e-11	62.0
Msa0811140	MtrunA17_Chr2g0333821	32.000	100	67	1	10	109	59	157	2.82e-11	61.6
Msa0811140	MtrunA17_Chr4g0051191	31.373	102	69	1	10	111	210	310	3.22e-11	61.2
Msa0811140	MtrunA17_Chr3g0091311	31.776	107	72	1	1	107	48	153	3.46e-11	60.5
Msa0811140	MtrunA17_Chr1g0205931	28.302	106	76	0	3	108	98	203	3.56e-11	61.6
Msa0811140	MtrunA17_Chr5g0443471	29.167	120	82	1	6	122	203	322	4.81e-11	60.8
Msa0811140	MtrunA17_Chr4g0072831	38.889	72	44	0	38	109	62	133	5.50e-11	60.5
Msa0811140	MtrunA17_Chr5g0423891	38.053	113	64	4	4	111	199	310	6.29e-11	60.5
Msa0811140	MtrunA17_Chr5g0396361	34.783	115	68	4	2	110	173	286	7.65e-11	60.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0811140	AT4G14350.2	74.603	189	39	2	1	189	155	334	6.29e-98	294
Msa0811140	AT4G14350.1	74.603	189	39	2	1	189	155	334	6.29e-98	294
Msa0811140	AT4G14350.4	74.603	189	39	2	1	189	155	334	6.29e-98	294
Msa0811140	AT4G14350.3	74.603	189	39	2	1	189	155	334	6.98e-98	294
Msa0811140	AT3G23310.1	73.822	191	39	3	1	189	156	337	7.30e-96	290
Msa0811140	AT2G20470.3	68.254	189	49	2	1	189	160	337	7.48e-90	273
Msa0811140	AT2G20470.2	68.254	189	49	2	1	189	160	337	2.98e-89	273
Msa0811140	AT2G20470.1	68.254	189	49	2	1	189	160	337	2.98e-89	273
Msa0811140	AT1G03920.2	69.841	189	47	3	1	189	60	238	1.98e-87	265
Msa0811140	AT1G03920.1	69.841	189	47	3	1	189	173	351	1.55e-86	265
Msa0811140	AT1G03920.3	69.841	189	47	3	1	189	173	351	1.55e-86	265
Msa0811140	AT4G33080.2	61.340	194	64	3	1	189	130	317	9.25e-76	236
Msa0811140	AT4G33080.1	61.340	194	64	3	1	189	130	317	9.44e-76	236
Msa0811140	AT2G19400.1	61.616	198	65	3	1	193	141	332	2.19e-75	236
Msa0811140	AT1G30640.3	59.375	192	67	3	1	189	63	246	1.34e-73	229
Msa0811140	AT5G09890.2	62.500	192	60	4	1	189	138	320	1.34e-73	231
Msa0811140	AT5G09890.1	62.500	192	60	4	1	189	138	320	1.49e-73	231
Msa0811140	AT1G30640.2	59.375	192	67	3	1	189	156	339	3.49e-73	231
Msa0811140	AT1G30640.1	59.375	192	67	3	1	189	156	339	3.49e-73	231
Msa0811140	AT5G62310.1	42.328	189	90	6	1	189	790	959	2.75e-34	128
Msa0811140	AT3G17850.1	38.144	194	97	4	1	192	918	1090	3.89e-32	122
Msa0811140	AT1G48490.3	37.500	192	95	3	1	192	864	1030	8.05e-32	121
Msa0811140	AT1G48490.2	37.500	192	95	3	1	192	864	1030	8.05e-32	121
Msa0811140	AT1G48490.1	37.500	192	95	3	1	192	864	1030	8.05e-32	121
Msa0811140	AT1G48490.4	37.500	192	95	3	1	192	865	1031	8.78e-32	121
Msa0811140	AT1G45160.1	38.462	195	95	5	1	193	706	877	4.22e-31	119
Msa0811140	AT1G45160.2	38.462	195	95	5	1	193	706	877	4.53e-31	119
Msa0811140	AT5G04510.3	44.248	113	63	0	6	118	85	197	7.61e-28	106
Msa0811140	AT5G04510.2	44.248	113	63	0	6	118	85	197	1.13e-27	108
Msa0811140	AT5G04510.1	44.248	113	63	0	6	118	85	197	1.64e-27	108
Msa0811140	AT3G10540.1	44.248	113	63	0	6	118	86	198	8.31e-27	106
Msa0811140	AT3G08730.1	37.719	114	71	0	1	114	170	283	9.05e-24	97.8
Msa0811140	AT3G08730.2	37.719	114	71	0	1	114	170	283	9.05e-24	97.8
Msa0811140	AT3G08720.1	37.719	114	71	0	1	114	176	289	1.57e-23	97.1
Msa0811140	AT3G08720.3	37.719	114	71	0	1	114	176	289	1.57e-23	97.1
Msa0811140	AT3G08720.4	37.719	114	71	0	1	114	176	289	1.57e-23	97.1
Msa0811140	AT3G08720.2	37.719	114	71	0	1	114	176	289	1.57e-23	97.1
Msa0811140	AT1G79250.1	28.959	221	129	4	1	193	182	402	2.09e-22	94.4
Msa0811140	AT1G79250.3	28.959	221	129	4	1	193	182	402	2.09e-22	94.4
Msa0811140	AT1G79250.2	28.959	221	129	4	1	193	182	402	2.09e-22	94.4
Msa0811140	AT1G79250.4	28.959	221	129	4	1	193	182	402	2.09e-22	94.4
Msa0811140	AT3G45780.2	40.336	119	64	2	1	112	699	817	8.79e-22	92.8
Msa0811140	AT3G45780.1	40.336	119	64	2	1	112	699	817	8.79e-22	92.8
Msa0811140	AT5G55910.2	30.973	226	121	7	1	193	145	368	2.42e-21	91.3
Msa0811140	AT5G55910.1	30.973	226	121	7	1	193	145	368	2.42e-21	91.3
Msa0811140	AT1G16440.1	29.032	217	121	6	1	193	151	358	8.02e-21	89.7
Msa0811140	AT5G58140.3	30.928	194	109	3	1	192	613	783	1.63e-20	89.0
Msa0811140	AT5G58140.6	30.928	194	109	3	1	192	613	783	1.89e-20	89.0
Msa0811140	AT5G58140.7	30.928	194	109	3	1	192	613	783	1.89e-20	89.0
Msa0811140	AT5G58140.5	30.928	194	109	3	1	192	613	783	1.89e-20	89.0
Msa0811140	AT5G58140.2	30.928	194	109	3	1	192	613	783	1.89e-20	89.0
Msa0811140	AT5G58140.1	30.928	194	109	3	1	192	613	783	1.89e-20	89.0
Msa0811140	AT5G47750.1	36.937	111	68	1	1	109	227	337	4.45e-20	87.8
Msa0811140	AT4G26610.1	38.739	111	66	1	1	109	159	269	7.70e-20	87.0
Msa0811140	AT3G52890.2	30.357	224	119	7	4	192	577	798	9.15e-20	87.0
Msa0811140	AT3G52890.4	30.357	224	119	7	4	192	577	798	9.15e-20	87.0
Msa0811140	AT3G52890.1	30.357	224	119	7	4	192	577	798	9.15e-20	87.0
Msa0811140	AT3G52890.3	30.357	224	119	7	4	192	577	798	9.15e-20	87.0
Msa0811140	AT2G36350.1	28.571	224	121	7	4	192	598	817	1.15e-19	86.7
Msa0811140	AT4G24400.2	36.697	109	69	0	1	109	45	153	2.00e-19	85.5
Msa0811140	AT4G24400.1	36.697	109	69	0	1	109	45	153	2.30e-19	85.5
Msa0811140	AT3G27580.2	29.148	223	126	6	1	193	218	438	2.45e-19	85.5
Msa0811140	AT3G27580.1	29.148	223	126	6	1	193	218	438	2.45e-19	85.5
Msa0811140	AT2G44830.2	37.963	108	65	1	4	109	402	509	3.13e-19	85.1
Msa0811140	AT2G44830.3	37.963	108	65	1	4	109	402	509	3.13e-19	85.1
Msa0811140	AT2G44830.1	37.963	108	65	1	4	109	402	509	3.13e-19	85.1
Msa0811140	AT3G44610.1	26.009	223	133	5	1	193	115	335	1.39e-18	83.2
Msa0811140	AT2G26700.1	37.374	99	60	1	13	109	137	235	2.74e-18	82.4
Msa0811140	AT2G34650.1	29.944	177	117	3	13	184	128	302	3.57e-18	82.0
Msa0811140	AT3G20830.1	32.086	187	111	7	20	193	79	262	3.64e-18	81.6
Msa0811140	AT2G45490.2	40.196	102	59	1	25	126	82	181	3.76e-18	80.1
Msa0811140	AT2G45490.1	40.196	102	59	1	25	126	82	181	5.28e-18	80.1
Msa0811140	AT3G12690.1	26.818	220	125	7	1	193	221	431	6.76e-18	81.3
Msa0811140	AT3G12690.3	26.818	220	125	7	1	193	221	431	6.76e-18	81.3
Msa0811140	AT3G12690.2	26.818	220	125	7	1	193	221	431	6.76e-18	81.3
Msa0811140	AT4G13000.1	26.768	198	123	5	3	189	59	245	1.51e-16	77.0
Msa0811140	AT1G53700.1	23.196	194	142	2	1	192	130	318	2.35e-16	76.6
Msa0811140	AT5G03640.2	27.679	224	121	6	4	192	580	797	2.49e-16	77.0
Msa0811140	AT5G03640.1	27.679	224	121	6	4	192	580	797	2.49e-16	77.0
Msa0811140	AT5G18700.1	35.294	102	66	0	13	114	46	147	3.14e-16	76.6
Msa0811140	AT5G45810.1	35.780	109	69	1	1	109	64	171	4.91e-16	75.9
Msa0811140	AT4G18700.1	35.780	109	69	1	1	109	62	169	5.24e-16	75.9
Msa0811140	AT5G40030.1	25.806	217	133	7	1	192	150	363	6.92e-16	75.5
Msa0811140	AT1G30270.1	26.455	189	91	3	1	189	67	207	7.06e-16	75.5
Msa0811140	AT5G25110.1	28.649	185	83	3	5	189	83	218	7.60e-16	75.5
Msa0811140	AT1G30270.2	26.455	189	91	3	1	189	67	207	8.04e-16	75.1
Msa0811140	AT3G14370.1	25.946	185	132	2	10	192	133	314	1.43e-15	74.3
Msa0811140	AT1G54960.1	31.193	109	75	0	3	111	111	219	2.63e-15	73.9
Msa0811140	AT1G54960.2	31.193	109	75	0	3	111	111	219	2.63e-15	73.9
Msa0811140	AT5G35410.2	32.540	126	84	1	1	125	47	172	3.15e-15	73.2
Msa0811140	AT1G51170.1	29.902	204	124	7	2	193	65	261	3.24e-15	73.2
Msa0811140	AT5G10930.1	28.042	189	87	3	1	189	49	188	3.37e-15	73.6
Msa0811140	AT5G35410.1	32.540	126	84	1	1	125	47	172	3.61e-15	73.2
Msa0811140	AT1G29230.1	33.945	109	71	1	1	109	110	217	5.09e-15	72.8
Msa0811140	AT2G26980.2	32.110	109	74	0	1	109	50	158	5.89e-15	71.6
Msa0811140	AT1G30270.3	30.263	152	58	3	38	189	7	110	6.51e-15	72.4
Msa0811140	AT2G26980.4	26.984	189	90	3	1	189	60	200	6.85e-15	72.4
Msa0811140	AT2G25090.1	26.344	186	96	2	4	189	55	199	7.00e-15	72.4
Msa0811140	AT2G26980.3	26.984	189	90	3	1	189	50	190	7.01e-15	72.4
Msa0811140	AT4G14580.1	29.091	165	69	2	25	189	82	198	8.28e-15	72.4
Msa0811140	AT2G26980.1	26.984	189	90	3	1	189	50	190	8.79e-15	72.0
Msa0811140	AT2G26980.5	32.110	109	74	0	1	109	50	158	1.03e-14	72.0
Msa0811140	AT1G49180.2	31.496	127	84	1	2	125	43	169	1.04e-14	71.6
Msa0811140	AT1G49180.1	31.496	127	84	1	2	125	43	169	1.30e-14	71.6
Msa0811140	AT5G58380.1	27.568	185	85	2	5	189	52	187	1.90e-14	71.2
Msa0811140	AT5G45820.1	28.649	185	83	3	5	189	52	187	2.46e-14	70.9
Msa0811140	AT1G09000.1	30.275	109	76	0	3	111	112	220	2.93e-14	70.9
Msa0811140	AT1G09000.2	30.275	109	76	0	3	111	112	220	3.02e-14	70.9
Msa0811140	AT3G01090.3	29.661	118	83	0	8	125	62	179	3.80e-14	70.5
Msa0811140	AT3G01090.1	29.661	118	83	0	8	125	62	179	3.80e-14	70.5
Msa0811140	AT3G01090.2	29.661	118	83	0	8	125	85	202	3.93e-14	70.5
Msa0811140	AT5G01810.1	28.042	189	87	3	1	189	48	187	4.71e-14	70.1
Msa0811140	AT5G01810.2	28.042	189	87	3	1	189	48	187	4.71e-14	70.1
Msa0811140	AT5G01810.3	28.042	189	87	3	1	189	48	187	5.18e-14	69.7
Msa0811140	AT2G30360.1	33.000	100	67	0	10	109	67	166	5.73e-14	69.7
Msa0811140	AT4G30960.1	27.869	183	83	3	7	189	66	199	6.73e-14	69.7
Msa0811140	AT4G24100.1	31.373	102	68	1	10	109	76	177	1.03e-13	69.3
Msa0811140	AT4G24100.2	31.373	102	68	1	10	109	76	177	1.13e-13	69.3
Msa0811140	AT4G24100.4	31.373	102	68	1	10	109	92	193	1.19e-13	68.9
Msa0811140	AT4G24100.3	31.373	102	68	1	10	109	92	193	1.20e-13	68.9
Msa0811140	AT2G25880.1	30.952	126	84	2	2	126	61	184	1.23e-13	68.2
Msa0811140	AT2G25880.4	33.028	109	72	1	2	109	74	182	1.40e-13	68.2
Msa0811140	AT4G32830.1	30.952	126	84	2	2	126	67	190	1.49e-13	67.8
Msa0811140	AT4G10730.1	31.373	102	68	1	10	109	90	191	1.55e-13	68.9
Msa0811140	AT4G10730.2	31.373	102	68	1	10	109	70	171	1.61e-13	68.6
Msa0811140	AT1G01140.1	25.263	190	91	2	7	193	61	202	2.02e-13	68.2
Msa0811140	AT1G01140.2	25.263	190	91	2	7	193	61	202	2.06e-13	68.2
Msa0811140	AT1G01140.3	25.263	190	91	2	7	193	61	202	2.06e-13	68.2
Msa0811140	AT2G25880.3	33.028	109	72	1	2	109	122	230	2.19e-13	67.8
Msa0811140	AT3G61960.1	27.586	116	81	1	13	125	57	172	2.24e-13	68.2
Msa0811140	AT1G63700.1	32.110	109	74	0	3	111	440	548	2.59e-13	68.2
Msa0811140	AT1G63700.2	32.110	109	74	0	3	111	440	548	2.59e-13	68.2
Msa0811140	AT3G61960.2	27.586	116	81	1	13	125	57	172	2.66e-13	68.2
Msa0811140	AT5G14720.1	31.373	102	68	1	10	109	59	160	3.24e-13	67.8
Msa0811140	AT5G14720.2	31.373	102	68	1	10	109	59	160	3.24e-13	67.8
Msa0811140	AT5G21326.1	30.275	109	76	0	1	109	49	157	3.31e-13	67.8
Msa0811140	AT3G29160.3	27.119	118	86	0	8	125	63	180	4.57e-13	67.0
Msa0811140	AT2G37840.1	28.926	121	83	1	8	125	54	174	5.36e-13	67.0
Msa0811140	AT5G21222.1	29.358	109	77	0	1	109	49	157	5.87e-13	67.0
Msa0811140	AT5G21222.2	29.358	109	77	0	1	109	49	157	5.87e-13	67.0
Msa0811140	AT5G21222.4	29.358	109	77	0	1	109	49	157	5.87e-13	67.0
Msa0811140	AT5G21222.3	29.358	109	77	0	1	109	49	157	5.87e-13	67.0
Msa0811140	AT3G29160.1	27.119	118	86	0	8	125	63	180	6.32e-13	67.0
Msa0811140	AT3G29160.2	27.119	118	86	0	8	125	63	180	6.32e-13	67.0
Msa0811140	AT1G53570.4	33.945	109	72	0	3	111	254	362	6.51e-13	67.0
Msa0811140	AT1G53570.2	33.945	109	72	0	3	111	254	362	6.51e-13	67.0
Msa0811140	AT1G53570.3	33.945	109	72	0	3	111	254	362	6.51e-13	67.0
Msa0811140	AT1G53570.1	33.945	109	72	0	3	111	254	362	6.52e-13	67.0
Msa0811140	AT1G70430.4	31.481	108	72	1	4	109	53	160	7.77e-13	66.6
Msa0811140	AT1G70430.3	31.481	108	72	1	4	109	53	160	7.96e-13	66.6
Msa0811140	AT1G70430.1	31.481	108	72	1	4	109	53	160	8.21e-13	66.6
Msa0811140	AT3G06030.1	29.358	109	77	0	3	111	111	219	8.65e-13	66.6
Msa0811140	AT3G23000.1	29.091	165	68	3	25	189	86	201	9.09e-13	66.2
Msa0811140	AT3G25250.1	27.660	188	124	4	10	189	69	252	1.31e-12	65.9
Msa0811140	AT4G14480.1	30.275	109	74	1	3	109	52	160	1.34e-12	65.9
Msa0811140	AT1G53570.7	36.364	99	63	0	13	111	264	362	1.44e-12	65.9
Msa0811140	AT1G53570.6	36.364	99	63	0	13	111	264	362	1.48e-12	65.9
Msa0811140	AT3G15220.1	34.951	103	67	0	11	113	59	161	1.58e-12	65.9
Msa0811140	AT1G69220.2	32.710	107	71	1	8	113	263	369	1.83e-12	65.9
Msa0811140	AT1G69220.1	32.710	107	71	1	8	113	290	396	1.93e-12	65.5
Msa0811140	AT1G79640.5	34.314	102	65	1	10	109	59	160	3.16e-12	65.1
Msa0811140	AT1G79640.2	34.314	102	65	1	10	109	56	157	3.18e-12	65.1
Msa0811140	AT1G79640.4	34.314	102	65	1	10	109	56	157	3.18e-12	65.1
Msa0811140	AT1G79640.3	34.314	102	65	1	10	109	56	157	3.18e-12	65.1
Msa0811140	AT1G79640.6	34.314	102	65	1	10	109	56	157	3.29e-12	64.7
Msa0811140	AT1G79640.1	34.314	102	65	1	10	109	56	157	3.31e-12	64.7
Msa0811140	AT2G34180.1	33.945	109	71	1	1	109	93	200	3.32e-12	64.7
Msa0811140	AT1G66750.1	35.238	105	68	0	13	117	60	164	9.76e-12	63.2
Msa0811140	AT4G08500.1	31.429	105	71	1	7	111	376	479	1.15e-11	63.2
Msa0811140	AT5G39440.1	27.723	101	73	0	25	125	79	179	2.42e-11	62.4
Msa0811140	AT1G53165.2	33.981	103	68	0	11	113	59	161	4.29e-11	61.6
Msa0811140	AT1G53165.1	33.981	103	68	0	11	113	59	161	4.45e-11	61.6
Msa0811140	AT1G53165.3	33.981	103	68	0	11	113	59	161	4.47e-11	61.6
Msa0811140	AT2G38490.1	31.193	109	74	1	2	110	65	172	6.24e-11	60.8

Find 41 sgRNAs with CRISPR-Local

Find 148 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CACGTGAAATTATCAGATTT+TGG	0.253070	5_3:+40300249	Msa0811140:CDS
CCAGTTGCTGTTGTTGTGAT+TGG	0.300638	5_3:-40300401	None:intergenic
ATGTTTATGAATAGACTCTA+TGG	0.331837	5_3:-40299939	None:intergenic
CATGCCCGACAACTTGCTTC+TGG	0.340707	5_3:+40300215	Msa0811140:CDS
GATGAAGCTAAATTCTATAT+CGG	0.354953	5_3:+40299902	Msa0811140:CDS
ATAAACATAATTATATTCAT+AGG	0.369736	5_3:+40299954	Msa0811140:CDS
AAAAGACTGCAGTAACCTTC+AGG	0.370471	5_3:+40300308	Msa0811140:CDS
ATTGCGAAAGAGTTAAATAA+TGG	0.386315	5_3:+40299563	Msa0811140:five_prime_UTR
GCTAGACTGCAGTAACCTTC+AGG	0.390289	5_3:+40300284	Msa0811140:CDS
ATGAAGCTAAATTCTATATC+GGG	0.407900	5_3:+40299903	Msa0811140:CDS
CCTCTCTTCAGAATAACTTC+TGG	0.412241	5_3:-40300886	None:intergenic
AAGCAAGTTCATCACTTTGA+AGG	0.415965	5_3:-40300368	None:intergenic
CCAATCACAACAACAGCAAC+TGG	0.416983	5_3:+40300401	Msa0811140:CDS
CGAGTATTTATATCTCATAA+TGG	0.455404	5_3:+40299820	Msa0811140:CDS
GAGTGTTCCAACCGTAGAAT+AGG	0.473047	5_3:-40300851	None:intergenic
TGCTATCAACTTCTGCAAGA+AGG	0.478344	5_3:-40299760	None:intergenic
TGCTGTTGTTGTGATTGGTT+AGG	0.484482	5_3:-40300396	None:intergenic
TCTAATGGAGTTAACATAAG+TGG	0.486303	5_3:+40300342	Msa0811140:CDS
AACAGCAACTGGAGCATTCG+CGG	0.503673	5_3:+40300412	Msa0811140:CDS
CTATCCAGAAGCAAGTTGTC+GGG	0.515263	5_3:-40300219	None:intergenic
TAAATACTCGTCATCTTGAA+AGG	0.518616	5_3:-40299807	None:intergenic
CAACGTCATCATATCTCCAC+CGG	0.521802	5_3:-40299852	None:intergenic
GATATTGCAGACCTATTCTA+CGG	0.522525	5_3:+40300840	Msa0811140:intron
TCTATCCAGAAGCAAGTTGT+CGG	0.524432	5_3:-40300220	None:intergenic
AGCATCTCTGATTTAACTCA+CGG	0.528343	5_3:-40299621	None:intergenic
TTGCAGACCTATTCTACGGT+TGG	0.534089	5_3:+40300844	Msa0811140:intron
CTCATAATGGAGTATCTACC+CGG	0.543468	5_3:+40299833	Msa0811140:CDS
AACTTGCTTCTGGATAGAAA+TGG	0.545939	5_3:+40300225	Msa0811140:CDS
AGAGATGCTTAGTAGAGGAC+AGG	0.546069	5_3:+40299635	Msa0811140:exon
CCAGAAGTTATTCTGAAGAG+AGG	0.595321	5_3:+40300886	Msa0811140:CDS
CAGAAGTTATTCTGAAGAGA+GGG	0.602815	5_3:+40300887	Msa0811140:CDS
TCTTTCGCAATGTGAAACTC+CGG	0.605862	5_3:-40299551	None:intergenic
TTCGCAATGTGAAACTCCGG+AGG	0.606544	5_3:-40299548	None:intergenic
TTGAATATATCAAATCTGAA+AGG	0.615218	5_3:+40299735	Msa0811140:CDS
ATATGATGACGTTGCTGATG+CGG	0.617376	5_3:+40299861	Msa0811140:CDS
TGAAGGTTACTGCAGTCTAG+CGG	0.630065	5_3:-40300282	None:intergenic
AAATCAGAGATGCTTAGTAG+AGG	0.631650	5_3:+40299630	Msa0811140:exon
TGAAGCTAAATTCTATATCG+GGG	0.655322	5_3:+40299904	Msa0811140:CDS
AACGTCATCATATCTCCACC+GGG	0.657380	5_3:-40299851	None:intergenic
TCGCAATGTGAAACTCCGGA+GGG	0.678985	5_3:-40299547	None:intergenic
ATAATGGAGTATCTACCCGG+TGG	0.717919	5_3:+40299836	Msa0811140:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATAAACATAATTATATTCAT+AGG	+	chr5_3:40299954-40299973	Msa0811140:CDS	10.0%
!!!	TTTTTATTATAACTGAAAAA+AGG	-	chr5_3:40300612-40300631	None:intergenic	10.0%
!!	ATAAACATAATTATATTCAT+AGG	+	chr5_3:40299954-40299973	Msa0811140:CDS	10.0%
!!!	TTTTTATTATAACTGAAAAA+AGG	-	chr5_3:40300612-40300631	None:intergenic	10.0%
!!!	ATTATTTTCTTTTACTTATC+AGG	+	chr5_3:40299690-40299709	Msa0811140:intron	15.0%
!!	TAGCAAACTTTATTATAAAA+CGG	+	chr5_3:40300510-40300529	Msa0811140:intron	15.0%
!!	ATTTACATCATATATCAATT+TGG	+	chr5_3:40300711-40300730	Msa0811140:intron	15.0%
!!	TTTACATCATATATCAATTT+GGG	+	chr5_3:40300712-40300731	Msa0811140:intron	15.0%
!!!	ATTATTTTCTTTTACTTATC+AGG	+	chr5_3:40299690-40299709	Msa0811140:intron	15.0%
!!	TAGCAAACTTTATTATAAAA+CGG	+	chr5_3:40300510-40300529	Msa0811140:intron	15.0%
!!	ATTTACATCATATATCAATT+TGG	+	chr5_3:40300711-40300730	Msa0811140:intron	15.0%
!!	TTTACATCATATATCAATTT+GGG	+	chr5_3:40300712-40300731	Msa0811140:intron	15.0%
!!	TTGAATATATCAAATCTGAA+AGG	+	chr5_3:40299735-40299754	Msa0811140:CDS	20.0%
!!	TATGATTACTTTATTCAAAG+CGG	+	chr5_3:40300580-40300599	Msa0811140:intron	20.0%
!!	TTGAATATATCAAATCTGAA+AGG	+	chr5_3:40299735-40299754	Msa0811140:CDS	20.0%
!!	TATGATTACTTTATTCAAAG+CGG	+	chr5_3:40300580-40300599	Msa0811140:intron	20.0%
!	ATTGCGAAAGAGTTAAATAA+TGG	+	chr5_3:40299563-40299582	Msa0811140:five_prime_UTR	25.0%
!!!	GTGCTTTTATGTTTTTGATT+AGG	+	chr5_3:40299712-40299731	Msa0811140:intron	25.0%
!	CGAGTATTTATATCTCATAA+TGG	+	chr5_3:40299820-40299839	Msa0811140:CDS	25.0%
!	GATGAAGCTAAATTCTATAT+CGG	+	chr5_3:40299902-40299921	Msa0811140:CDS	25.0%
!	ATGAAGCTAAATTCTATATC+GGG	+	chr5_3:40299903-40299922	Msa0811140:CDS	25.0%
!	ATGTTTATGAATAGACTCTA+TGG	-	chr5_3:40299942-40299961	None:intergenic	25.0%
!	GCTACAATCTTATACTAAAT+AGG	-	chr5_3:40300016-40300035	None:intergenic	25.0%
!	AGTGATTTCGTTGAAAATAA+CGG	-	chr5_3:40300058-40300077	None:intergenic	25.0%
!	AATTATCAGTGTTAGATTGT+AGG	+	chr5_3:40300088-40300107	Msa0811140:intron	25.0%
!	ATTATCAGTGTTAGATTGTA+GGG	+	chr5_3:40300089-40300108	Msa0811140:intron	25.0%
!!	TTATAACTGAAAAAAGGTGT+AGG	-	chr5_3:40300606-40300625	None:intergenic	25.0%
!	CATTATTCTTTCGTTATGTT+TGG	+	chr5_3:40300638-40300657	Msa0811140:intron	25.0%
!!!	TCTTTCGTGATATTTTTGTT+TGG	+	chr5_3:40300669-40300688	Msa0811140:intron	25.0%
!	AAAGAGAGAATAGTCTTTAA+AGG	-	chr5_3:40300757-40300776	None:intergenic	25.0%
!!!	TATTCTCTCTTTTGATTGTA+TGG	+	chr5_3:40300765-40300784	Msa0811140:intron	25.0%
!	GTGATTGGTATAATAGTATA+TGG	+	chr5_3:40300923-40300942	Msa0811140:intron	25.0%
!	ATTGCGAAAGAGTTAAATAA+TGG	+	chr5_3:40299563-40299582	Msa0811140:five_prime_UTR	25.0%
!!!	GTGCTTTTATGTTTTTGATT+AGG	+	chr5_3:40299712-40299731	Msa0811140:intron	25.0%
!	CGAGTATTTATATCTCATAA+TGG	+	chr5_3:40299820-40299839	Msa0811140:CDS	25.0%
!	GATGAAGCTAAATTCTATAT+CGG	+	chr5_3:40299902-40299921	Msa0811140:CDS	25.0%
!	ATGAAGCTAAATTCTATATC+GGG	+	chr5_3:40299903-40299922	Msa0811140:CDS	25.0%
!	ATGTTTATGAATAGACTCTA+TGG	-	chr5_3:40299942-40299961	None:intergenic	25.0%
!	GCTACAATCTTATACTAAAT+AGG	-	chr5_3:40300016-40300035	None:intergenic	25.0%
!	AGTGATTTCGTTGAAAATAA+CGG	-	chr5_3:40300058-40300077	None:intergenic	25.0%
!	AATTATCAGTGTTAGATTGT+AGG	+	chr5_3:40300088-40300107	Msa0811140:intron	25.0%
!	ATTATCAGTGTTAGATTGTA+GGG	+	chr5_3:40300089-40300108	Msa0811140:intron	25.0%
!!	TTATAACTGAAAAAAGGTGT+AGG	-	chr5_3:40300606-40300625	None:intergenic	25.0%
!	CATTATTCTTTCGTTATGTT+TGG	+	chr5_3:40300638-40300657	Msa0811140:intron	25.0%
!!!	TCTTTCGTGATATTTTTGTT+TGG	+	chr5_3:40300669-40300688	Msa0811140:intron	25.0%
!	AAAGAGAGAATAGTCTTTAA+AGG	-	chr5_3:40300757-40300776	None:intergenic	25.0%
!!!	TATTCTCTCTTTTGATTGTA+TGG	+	chr5_3:40300765-40300784	Msa0811140:intron	25.0%
!	GTGATTGGTATAATAGTATA+TGG	+	chr5_3:40300923-40300942	Msa0811140:intron	25.0%
	TAAATACTCGTCATCTTGAA+AGG	-	chr5_3:40299810-40299829	None:intergenic	30.0%
	TGAAGCTAAATTCTATATCG+GGG	+	chr5_3:40299904-40299923	Msa0811140:CDS	30.0%
!	CAACGAAATCACTATTGTTT+TGG	+	chr5_3:40300065-40300084	Msa0811140:intron	30.0%
!	CACGTGAAATTATCAGATTT+TGG	+	chr5_3:40300249-40300268	Msa0811140:CDS	30.0%
!	TAGATAAGTCTTTTTCCTGA+AGG	-	chr5_3:40300326-40300345	None:intergenic	30.0%
	CAGGAAAAAGACTTATCTAA+TGG	+	chr5_3:40300327-40300346	Msa0811140:CDS	30.0%
	TCTAATGGAGTTAACATAAG+TGG	+	chr5_3:40300342-40300361	Msa0811140:CDS	30.0%
	GAATAAGTGAATAACTTCTC+AGG	+	chr5_3:40300977-40300996	Msa0811140:intron	30.0%
	TAAATACTCGTCATCTTGAA+AGG	-	chr5_3:40299810-40299829	None:intergenic	30.0%
	TGAAGCTAAATTCTATATCG+GGG	+	chr5_3:40299904-40299923	Msa0811140:CDS	30.0%
!	CAACGAAATCACTATTGTTT+TGG	+	chr5_3:40300065-40300084	Msa0811140:intron	30.0%
!	CACGTGAAATTATCAGATTT+TGG	+	chr5_3:40300249-40300268	Msa0811140:CDS	30.0%
!	TAGATAAGTCTTTTTCCTGA+AGG	-	chr5_3:40300326-40300345	None:intergenic	30.0%
	CAGGAAAAAGACTTATCTAA+TGG	+	chr5_3:40300327-40300346	Msa0811140:CDS	30.0%
	TCTAATGGAGTTAACATAAG+TGG	+	chr5_3:40300342-40300361	Msa0811140:CDS	30.0%
	GAATAAGTGAATAACTTCTC+AGG	+	chr5_3:40300977-40300996	Msa0811140:intron	30.0%
	AGCATCTCTGATTTAACTCA+CGG	-	chr5_3:40299624-40299643	None:intergenic	35.0%
	AAATCAGAGATGCTTAGTAG+AGG	+	chr5_3:40299630-40299649	Msa0811140:exon	35.0%
	CATGAATACCTCTGAATGAT+CGG	-	chr5_3:40300145-40300164	None:intergenic	35.0%
!	AACTTGCTTCTGGATAGAAA+TGG	+	chr5_3:40300225-40300244	Msa0811140:CDS	35.0%
	AAGCAAGTTCATCACTTTGA+AGG	-	chr5_3:40300371-40300390	None:intergenic	35.0%
	CTTTCGTTATGTTTGGACTT+CGG	+	chr5_3:40300645-40300664	Msa0811140:intron	35.0%
	GATATTGCAGACCTATTCTA+CGG	+	chr5_3:40300840-40300859	Msa0811140:intron	35.0%
!	CAGAAGTTATTCTGAAGAGA+GGG	+	chr5_3:40300887-40300906	Msa0811140:CDS	35.0%
	AGCATCTCTGATTTAACTCA+CGG	-	chr5_3:40299624-40299643	None:intergenic	35.0%
	AAATCAGAGATGCTTAGTAG+AGG	+	chr5_3:40299630-40299649	Msa0811140:exon	35.0%
	CATGAATACCTCTGAATGAT+CGG	-	chr5_3:40300145-40300164	None:intergenic	35.0%
!	AACTTGCTTCTGGATAGAAA+TGG	+	chr5_3:40300225-40300244	Msa0811140:CDS	35.0%
	AAGCAAGTTCATCACTTTGA+AGG	-	chr5_3:40300371-40300390	None:intergenic	35.0%
	CTTTCGTTATGTTTGGACTT+CGG	+	chr5_3:40300645-40300664	Msa0811140:intron	35.0%
	GATATTGCAGACCTATTCTA+CGG	+	chr5_3:40300840-40300859	Msa0811140:intron	35.0%
!	CAGAAGTTATTCTGAAGAGA+GGG	+	chr5_3:40300887-40300906	Msa0811140:CDS	35.0%
!	AGATGTCTTTCTTTTCCCTC+CGG	+	chr5_3:40299532-40299551	Msa0811140:five_prime_UTR	40.0%
	TCTTTCGCAATGTGAAACTC+CGG	-	chr5_3:40299554-40299573	None:intergenic	40.0%
	TGCTATCAACTTCTGCAAGA+AGG	-	chr5_3:40299763-40299782	None:intergenic	40.0%
!	CTCATAATGGAGTATCTACC+CGG	+	chr5_3:40299833-40299852	Msa0811140:CDS	40.0%
!	ATATGATGACGTTGCTGATG+CGG	+	chr5_3:40299861-40299880	Msa0811140:CDS	40.0%
	GGGTACTTAACTTTACGACA+TGG	+	chr5_3:40300109-40300128	Msa0811140:intron	40.0%
	CTTGAATACCGATCATTCAG+AGG	+	chr5_3:40300134-40300153	Msa0811140:intron	40.0%
	TCTATCCAGAAGCAAGTTGT+CGG	-	chr5_3:40300223-40300242	None:intergenic	40.0%
!	TACTGCAGTCTTTTTCCTGA+AGG	-	chr5_3:40300302-40300321	None:intergenic	40.0%
	AAAAGACTGCAGTAACCTTC+AGG	+	chr5_3:40300308-40300327	Msa0811140:CDS	40.0%
!	TGCTGTTGTTGTGATTGGTT+AGG	-	chr5_3:40300399-40300418	None:intergenic	40.0%
	CCTCTCTTCAGAATAACTTC+TGG	-	chr5_3:40300889-40300908	None:intergenic	40.0%
!	CCAGAAGTTATTCTGAAGAG+AGG	+	chr5_3:40300886-40300905	Msa0811140:CDS	40.0%
!	GTTATTCTGAAGAGAGGGTA+TGG	+	chr5_3:40300892-40300911	Msa0811140:intron	40.0%
!	AGTATATGGCGTTGAAAGCT+TGG	+	chr5_3:40300937-40300956	Msa0811140:intron	40.0%
!	AGATGTCTTTCTTTTCCCTC+CGG	+	chr5_3:40299532-40299551	Msa0811140:five_prime_UTR	40.0%
	TCTTTCGCAATGTGAAACTC+CGG	-	chr5_3:40299554-40299573	None:intergenic	40.0%
	TGCTATCAACTTCTGCAAGA+AGG	-	chr5_3:40299763-40299782	None:intergenic	40.0%
!	CTCATAATGGAGTATCTACC+CGG	+	chr5_3:40299833-40299852	Msa0811140:CDS	40.0%
!	ATATGATGACGTTGCTGATG+CGG	+	chr5_3:40299861-40299880	Msa0811140:CDS	40.0%
	GGGTACTTAACTTTACGACA+TGG	+	chr5_3:40300109-40300128	Msa0811140:intron	40.0%
	CTTGAATACCGATCATTCAG+AGG	+	chr5_3:40300134-40300153	Msa0811140:intron	40.0%
	TCTATCCAGAAGCAAGTTGT+CGG	-	chr5_3:40300223-40300242	None:intergenic	40.0%
!	TACTGCAGTCTTTTTCCTGA+AGG	-	chr5_3:40300302-40300321	None:intergenic	40.0%
	AAAAGACTGCAGTAACCTTC+AGG	+	chr5_3:40300308-40300327	Msa0811140:CDS	40.0%
!	TGCTGTTGTTGTGATTGGTT+AGG	-	chr5_3:40300399-40300418	None:intergenic	40.0%
	CCTCTCTTCAGAATAACTTC+TGG	-	chr5_3:40300889-40300908	None:intergenic	40.0%
!	CCAGAAGTTATTCTGAAGAG+AGG	+	chr5_3:40300886-40300905	Msa0811140:CDS	40.0%
!	GTTATTCTGAAGAGAGGGTA+TGG	+	chr5_3:40300892-40300911	Msa0811140:intron	40.0%
!	AGTATATGGCGTTGAAAGCT+TGG	+	chr5_3:40300937-40300956	Msa0811140:intron	40.0%
	AGAGATGCTTAGTAGAGGAC+AGG	+	chr5_3:40299635-40299654	Msa0811140:exon	45.0%
	GCTTAGTAGAGGACAGGTAT+TGG	+	chr5_3:40299641-40299660	Msa0811140:intron	45.0%
!	ATAATGGAGTATCTACCCGG+TGG	+	chr5_3:40299836-40299855	Msa0811140:CDS	45.0%
	AACGTCATCATATCTCCACC+GGG	-	chr5_3:40299854-40299873	None:intergenic	45.0%
	CAACGTCATCATATCTCCAC+CGG	-	chr5_3:40299855-40299874	None:intergenic	45.0%
	CTATCCAGAAGCAAGTTGTC+GGG	-	chr5_3:40300222-40300241	None:intergenic	45.0%
	TGAAGGTTACTGCAGTCTAG+CGG	-	chr5_3:40300285-40300304	None:intergenic	45.0%
!	CCAGTTGCTGTTGTTGTGAT+TGG	-	chr5_3:40300404-40300423	None:intergenic	45.0%
	CCAATCACAACAACAGCAAC+TGG	+	chr5_3:40300401-40300420	Msa0811140:CDS	45.0%
	GAAAAATCGCAGCAGAATGC+TGG	+	chr5_3:40300434-40300453	Msa0811140:CDS	45.0%
	TTGCAGACCTATTCTACGGT+TGG	+	chr5_3:40300844-40300863	Msa0811140:intron	45.0%
	GAGTGTTCCAACCGTAGAAT+AGG	-	chr5_3:40300854-40300873	None:intergenic	45.0%
	AGAGATGCTTAGTAGAGGAC+AGG	+	chr5_3:40299635-40299654	Msa0811140:exon	45.0%
	GCTTAGTAGAGGACAGGTAT+TGG	+	chr5_3:40299641-40299660	Msa0811140:intron	45.0%
!	ATAATGGAGTATCTACCCGG+TGG	+	chr5_3:40299836-40299855	Msa0811140:CDS	45.0%
	AACGTCATCATATCTCCACC+GGG	-	chr5_3:40299854-40299873	None:intergenic	45.0%
	CAACGTCATCATATCTCCAC+CGG	-	chr5_3:40299855-40299874	None:intergenic	45.0%
	CTATCCAGAAGCAAGTTGTC+GGG	-	chr5_3:40300222-40300241	None:intergenic	45.0%
	TGAAGGTTACTGCAGTCTAG+CGG	-	chr5_3:40300285-40300304	None:intergenic	45.0%
!	CCAGTTGCTGTTGTTGTGAT+TGG	-	chr5_3:40300404-40300423	None:intergenic	45.0%
	CCAATCACAACAACAGCAAC+TGG	+	chr5_3:40300401-40300420	Msa0811140:CDS	45.0%
	GAAAAATCGCAGCAGAATGC+TGG	+	chr5_3:40300434-40300453	Msa0811140:CDS	45.0%
	TTGCAGACCTATTCTACGGT+TGG	+	chr5_3:40300844-40300863	Msa0811140:intron	45.0%
	GAGTGTTCCAACCGTAGAAT+AGG	-	chr5_3:40300854-40300873	None:intergenic	45.0%
	TCGCAATGTGAAACTCCGGA+GGG	-	chr5_3:40299550-40299569	None:intergenic	50.0%
	TTCGCAATGTGAAACTCCGG+AGG	-	chr5_3:40299551-40299570	None:intergenic	50.0%
	GCTAGACTGCAGTAACCTTC+AGG	+	chr5_3:40300284-40300303	Msa0811140:CDS	50.0%
!	AACAGCAACTGGAGCATTCG+CGG	+	chr5_3:40300412-40300431	Msa0811140:CDS	50.0%
	GGTATGGCGTGGAATGTGAT+TGG	+	chr5_3:40300908-40300927	Msa0811140:intron	50.0%
	TCGCAATGTGAAACTCCGGA+GGG	-	chr5_3:40299550-40299569	None:intergenic	50.0%
	TTCGCAATGTGAAACTCCGG+AGG	-	chr5_3:40299551-40299570	None:intergenic	50.0%
	GCTAGACTGCAGTAACCTTC+AGG	+	chr5_3:40300284-40300303	Msa0811140:CDS	50.0%
!	AACAGCAACTGGAGCATTCG+CGG	+	chr5_3:40300412-40300431	Msa0811140:CDS	50.0%
	GGTATGGCGTGGAATGTGAT+TGG	+	chr5_3:40300908-40300927	Msa0811140:intron	50.0%
!	CATGCCCGACAACTTGCTTC+TGG	+	chr5_3:40300215-40300234	Msa0811140:CDS	55.0%
!	TCTGAAGAGAGGGTATGGCG+TGG	+	chr5_3:40300897-40300916	Msa0811140:intron	55.0%
!	CATGCCCGACAACTTGCTTC+TGG	+	chr5_3:40300215-40300234	Msa0811140:CDS	55.0%
!	TCTGAAGAGAGGGTATGGCG+TGG	+	chr5_3:40300897-40300916	Msa0811140:intron	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr5_3	gene	40299511	40301020	40299511	ID=Msa0811140;Name=Msa0811140
chr5_3	mRNA	40299511	40301020	40299511	ID=Msa0811140-mRNA-1;Parent=Msa0811140;Name=Msa0811140-mRNA-1;_AED=0.35;_eAED=0.35;_QI=128\|0.25\|0.2\|0.4\|1\|1\|5\|0\|195
chr5_3	exon	40299511	40299656	40299511	ID=Msa0811140-mRNA-1:exon:12364;Parent=Msa0811140-mRNA-1
chr5_3	exon	40299734	40299975	40299734	ID=Msa0811140-mRNA-1:exon:12365;Parent=Msa0811140-mRNA-1
chr5_3	exon	40300209	40300455	40300209	ID=Msa0811140-mRNA-1:exon:12366;Parent=Msa0811140-mRNA-1
chr5_3	exon	40300850	40300908	40300850	ID=Msa0811140-mRNA-1:exon:12367;Parent=Msa0811140-mRNA-1
chr5_3	exon	40300999	40301020	40300999	ID=Msa0811140-mRNA-1:exon:12368;Parent=Msa0811140-mRNA-1
chr5_3	five_prime_UTR	40299511	40299638	40299511	ID=Msa0811140-mRNA-1:five_prime_utr;Parent=Msa0811140-mRNA-1
chr5_3	CDS	40299639	40299656	40299639	ID=Msa0811140-mRNA-1:cds;Parent=Msa0811140-mRNA-1
chr5_3	CDS	40299734	40299975	40299734	ID=Msa0811140-mRNA-1:cds;Parent=Msa0811140-mRNA-1
chr5_3	CDS	40300209	40300455	40300209	ID=Msa0811140-mRNA-1:cds;Parent=Msa0811140-mRNA-1
chr5_3	CDS	40300850	40300908	40300850	ID=Msa0811140-mRNA-1:cds;Parent=Msa0811140-mRNA-1
chr5_3	CDS	40300999	40301020	40300999	ID=Msa0811140-mRNA-1:cds;Parent=Msa0811140-mRNA-1

Gene Sequence

>Msa0811140

ATGCTTAGTAGAGGACAGGTTGAATATATCAAATCTGAAAGGAACCTTCTTGCAGAAGTTGATAGCAATTGCATTGTAAAACTTTATTGTTCCTTTCAAGATGACGAGTATTTATATCTCATAATGGAGTATCTACCCGGTGGAGATATGATGACGTTGCTGATGCGGAATGAAGTACTGACTGAAGATGAAGCTAAATTCTATATCGGGGAGACTGTGCTAGCCATAGAGTCTATTCATAAACATAATTATATTCATAGAGATATCATGCCCGACAACTTGCTTCTGGATAGAAATGGTCACGTGAAATTATCAGATTTTGGATTATGTAAGCCGCTAGACTGCAGTAACCTTCAGGAAAAAGACTGCAGTAACCTTCAGGAAAAAGACTTATCTAATGGAGTTAACATAAGTGGAGTCCTTCAAAGTGATGAACTTGCTTTATCTCCTAACCAATCACAACAACAGCAACTGGAGCATTCGCGGAAAAATCGCAGCAGAATGCTGACCTATTCTACGGTTGGAACACTCGATTATATTGCTCCAGAAGTTATTCTGAAGAGAGGGTCTGCTGCTGATAATCTCTAA

Protein sequence

>Msa0811140

MLSRGQVEYIKSERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRNEVLTEDEAKFYIGETVLAIESIHKHNYIHRDIMPDNLLLDRNGHVKLSDFGLCKPLDCSNLQEKDCSNLQEKDLSNGVNISGVLQSDELALSPNQSQQQQLEHSRKNRSRMLTYSTVGTLDYIAPEVILKRGSAADNL*