Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0871500 | XP_013450932.1 | 98.921 | 278 | 3 | 0 | 1 | 278 | 1 | 278 | 0.0 | 558 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0871500 | sp|P42054|VDAC_PEA | 72.662 | 278 | 74 | 1 | 1 | 278 | 1 | 276 | 1.08e-150 | 425 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0871500 | I3S1P8 | 98.921 | 278 | 3 | 0 | 1 | 278 | 1 | 278 | 0.0 | 558 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0871500 | Msa0904660 | 0.970229 | 2.666494e-131 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0871500 | MtrunA17_Chr6g0452811 | 98.921 | 278 | 3 | 0 | 1 | 278 | 1 | 278 | 0.0 | 558 |
| Msa0871500 | MtrunA17_Chr7g0216561 | 68.231 | 277 | 86 | 1 | 2 | 278 | 3 | 277 | 1.59e-143 | 404 |
| Msa0871500 | MtrunA17_Chr8g0362621 | 62.230 | 278 | 103 | 1 | 1 | 278 | 1 | 276 | 4.21e-128 | 365 |
| Msa0871500 | MtrunA17_Chr5g0401201 | 49.640 | 278 | 138 | 1 | 1 | 278 | 1 | 276 | 2.33e-92 | 274 |
| Msa0871500 | MtrunA17_Chr4g0072511 | 45.552 | 281 | 148 | 3 | 1 | 278 | 1 | 279 | 1.98e-78 | 239 |
| Msa0871500 | MtrunA17_Chr1g0152591 | 44.404 | 277 | 152 | 1 | 2 | 278 | 3 | 277 | 2.09e-76 | 233 |
| Msa0871500 | MtrunA17_Chr4g0060181 | 32.632 | 285 | 144 | 5 | 1 | 278 | 1 | 244 | 4.18e-45 | 152 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0871500 | AT3G01280.1 | 65.468 | 278 | 94 | 1 | 1 | 278 | 1 | 276 | 5.45e-140 | 395 |
| Msa0871500 | AT5G15090.1 | 65.468 | 278 | 92 | 2 | 1 | 278 | 1 | 274 | 3.26e-135 | 383 |
| Msa0871500 | AT5G15090.2 | 65.468 | 278 | 92 | 2 | 1 | 278 | 1 | 274 | 3.26e-135 | 383 |
| Msa0871500 | AT5G67500.3 | 47.842 | 278 | 143 | 1 | 1 | 278 | 1 | 276 | 1.95e-93 | 277 |
| Msa0871500 | AT5G67500.1 | 47.212 | 269 | 140 | 1 | 1 | 269 | 1 | 267 | 5.70e-88 | 264 |
| Msa0871500 | AT5G67500.2 | 43.607 | 305 | 143 | 2 | 1 | 278 | 1 | 303 | 1.87e-87 | 263 |
| Msa0871500 | AT5G57490.1 | 44.604 | 278 | 150 | 2 | 1 | 278 | 1 | 274 | 1.58e-81 | 247 |
| Msa0871500 | AT3G49920.1 | 35.971 | 278 | 126 | 2 | 1 | 278 | 1 | 226 | 4.19e-54 | 175 |
| Msa0871500 | AT3G49920.2 | 45.133 | 113 | 62 | 0 | 1 | 113 | 1 | 113 | 7.76e-26 | 99.4 |
| Msa0871500 | AT3G49920.4 | 45.133 | 113 | 62 | 0 | 1 | 113 | 1 | 113 | 7.76e-26 | 99.4 |
| Msa0871500 | AT5G37610.1 | 36.747 | 166 | 99 | 3 | 113 | 276 | 2 | 163 | 3.83e-25 | 98.6 |
| Msa0871500 | AT3G49920.3 | 54.545 | 77 | 35 | 0 | 1 | 77 | 1 | 77 | 1.79e-23 | 92.4 |
Find 80 sgRNAs with CRISPR-Local
Find 251 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATCATTCTTCACCATTTC+TGG | 0.094067 | 6_1:-6387946 | Msa0871500:CDS |
| TGGGGCATTATTCAATAATT+TGG | 0.105065 | 6_1:-6387545 | Msa0871500:three_prime_UTR |
| GAAATGGTGAAGAATGATTT+TGG | 0.230254 | 6_1:+6387949 | None:intergenic |
| TTTGAGGTTGGTTCTATTAT+TGG | 0.245423 | 6_1:-6387780 | Msa0871500:three_prime_UTR |
| TGCACTCTTCTCAATGGCCT+TGG | 0.292656 | 6_1:+6387912 | None:intergenic |
| CATGGTAGTACGAAGCATTC+AGG | 0.324216 | 6_1:+6388145 | None:intergenic |
| GGGGCATTATTCAATAATTT+GGG | 0.329501 | 6_1:-6387544 | Msa0871500:three_prime_UTR |
| CCAGACTTTAGTTCAGGTTC+AGG | 0.331087 | 6_1:+6389607 | None:intergenic |
| TCAAGATGTAGCACCAGTTT+GGG | 0.335710 | 6_1:-6387564 | Msa0871500:three_prime_UTR |
| ACACCAGAAAAGTTGGCAAT+TGG | 0.338198 | 6_1:+6389423 | None:intergenic |
| CTTTCTTATGACACCAAAAC+TGG | 0.346527 | 6_1:-6389366 | Msa0871500:CDS |
| GTTGGTTGTTGAGAGAAAAT+TGG | 0.349847 | 6_1:+6391905 | None:intergenic |
| TCAAGACTATTCTTAGCTTC+AGG | 0.359070 | 6_1:-6389633 | Msa0871500:CDS |
| TCTTGTGAACACGCCAGTTT+TGG | 0.359359 | 6_1:+6389353 | None:intergenic |
| GTCAAGATGTAGCACCAGTT+TGG | 0.359734 | 6_1:-6387565 | Msa0871500:three_prime_UTR |
| CGAAGCAATCAAATCGTCTT+TGG | 0.360628 | 6_1:+6389308 | None:intergenic |
| AAGTAGTGAGAGTGAACTTC+TGG | 0.367066 | 6_1:+6391688 | None:intergenic |
| GACTCTTGGATCCATATTCA+TGG | 0.373377 | 6_1:+6387585 | None:intergenic |
| TCATCATAGGTAAATTAATA+TGG | 0.383102 | 6_1:-6387493 | Msa0871500:intron |
| CACCAGAAAAGTTGGCAATT+GGG | 0.385907 | 6_1:+6389424 | None:intergenic |
| GTGGTTGTGCCCCATGAATA+TGG | 0.407405 | 6_1:-6387596 | Msa0871500:three_prime_UTR |
| ACCTTTCCAGACTTTAGTTC+AGG | 0.409767 | 6_1:+6389601 | None:intergenic |
| CCTGGACCCTTTGACATTGT+TGG | 0.416884 | 6_1:+6391887 | None:intergenic |
| TGCAAGAATTGGAATAGCTT+TGG | 0.416994 | 6_1:-6387893 | Msa0871500:CDS |
| TCCAATAACACCAGAAAAGT+TGG | 0.423097 | 6_1:+6389416 | None:intergenic |
| CTGGGATTTCCGCCAGCATT+GGG | 0.423944 | 6_1:-6389458 | Msa0871500:CDS |
| ATTGAGAAGAGTGCAAGAAT+TGG | 0.429625 | 6_1:-6387904 | Msa0871500:CDS |
| GGTGTCCACCTCACCAGAAA+TGG | 0.430124 | 6_1:+6387933 | None:intergenic |
| GCTGGGATTTCCGCCAGCAT+TGG | 0.432425 | 6_1:-6389459 | Msa0871500:CDS |
| CTCACTACTTATTCACCTAC+TGG | 0.441736 | 6_1:-6391675 | Msa0871500:CDS |
| AATTCTTGCACTCTTCTCAA+TGG | 0.442907 | 6_1:+6387906 | None:intergenic |
| CAGTACTTGCATGACTATGC+TGG | 0.447339 | 6_1:-6389477 | Msa0871500:CDS |
| ACTGTTAATGAGCCAGCTCC+TGG | 0.450210 | 6_1:-6389658 | Msa0871500:CDS |
| ACTACATTTGAATCATAATC+AGG | 0.458351 | 6_1:+6387403 | None:intergenic |
| CCTGAACCTGAACTAAAGTC+TGG | 0.459932 | 6_1:-6389607 | Msa0871500:CDS |
| TATTGAATAATGCCCCAAAC+TGG | 0.467139 | 6_1:+6387551 | None:intergenic |
| TATTGCAGATCTTCTTTACA+AGG | 0.467342 | 6_1:-6391724 | Msa0871500:intron |
| TTTGCTCAAAATTCCTCTCA+AGG | 0.480557 | 6_1:+6387862 | None:intergenic |
| TAGTAATGGGATTGACTACA+TGG | 0.484241 | 6_1:+6388127 | None:intergenic |
| CCCATTACTAAAACAGCTGT+TGG | 0.486039 | 6_1:-6388114 | Msa0871500:CDS |
| TGGTGCTACATCTTGACTCT+TGG | 0.491042 | 6_1:+6387571 | None:intergenic |
| ACTCTTGGATCCATATTCAT+GGG | 0.506124 | 6_1:+6387586 | None:intergenic |
| CTTCACCATTTCTGGTGAGG+TGG | 0.514326 | 6_1:-6387938 | Msa0871500:CDS |
| CTCACCTTTCTTGGTACTTG+AGG | 0.516518 | 6_1:+6390617 | None:intergenic |
| CCGATGTCAGAGTAGAGACC+TGG | 0.523110 | 6_1:+6391869 | None:intergenic |
| GAATGTCACTACTGATATCA+AGG | 0.523422 | 6_1:-6390556 | Msa0871500:CDS |
| ATAGTCTTGAGGCCAGGAGC+TGG | 0.527584 | 6_1:+6389646 | None:intergenic |
| ATGGTAGTACGAAGCATTCA+GGG | 0.530476 | 6_1:+6388146 | None:intergenic |
| GTTTGCTGTCAACCCAATGC+TGG | 0.533852 | 6_1:+6389446 | None:intergenic |
| AGTACTTGCATGACTATGCT+GGG | 0.535027 | 6_1:-6389476 | Msa0871500:CDS |
| GGAAATAATGTAGTTGCTCT+CGG | 0.543480 | 6_1:-6389396 | Msa0871500:CDS |
| TCAACAACCAACAATGTCAA+AGG | 0.549726 | 6_1:-6391894 | Msa0871500:exon |
| ATTCTTCACCATTTCTGGTG+AGG | 0.552957 | 6_1:-6387941 | Msa0871500:CDS |
| CTAAGAATAGTCTTGAGGCC+AGG | 0.561374 | 6_1:+6389640 | None:intergenic |
| CAACAACCAACAATGTCAAA+GGG | 0.564550 | 6_1:-6391893 | Msa0871500:exon |
| AAAGAAAACACACTCACACT+TGG | 0.565898 | 6_1:-6388063 | Msa0871500:CDS |
| CCAGGTCTCTACTCTGACAT+CGG | 0.570066 | 6_1:-6391869 | Msa0871500:CDS |
| ACTGCCTCAAGTACCAAGAA+AGG | 0.570898 | 6_1:-6390621 | Msa0871500:CDS |
| TTTGGCTCTCAAACCTTGAG+AGG | 0.571180 | 6_1:-6387875 | Msa0871500:exon |
| AAGCTTCGATTCAACAACTT+CGG | 0.572667 | 6_1:-6388006 | Msa0871500:CDS |
| TCGATTCAACAACTTCGGAC+TGG | 0.577522 | 6_1:-6388001 | Msa0871500:CDS |
| TAAAACAGCTGTTGGAGCTG+AGG | 0.577802 | 6_1:-6388106 | Msa0871500:CDS |
| AACAACTTCGGACTGGCAAG+CGG | 0.577860 | 6_1:-6387994 | Msa0871500:CDS |
| GCGGTCTCATCCAGCACGAG+TGG | 0.581180 | 6_1:-6387975 | Msa0871500:CDS |
| TTCTGGTGAGGTGGACACCA+AGG | 0.584182 | 6_1:-6387929 | Msa0871500:CDS |
| GTTGAGGTAGTCATTAGCAA+AGG | 0.591761 | 6_1:-6387836 | Msa0871500:three_prime_UTR |
| TGCTGTCAACCCAATGCTGG+CGG | 0.599470 | 6_1:+6389449 | None:intergenic |
| TAGTCACCATTGCATGACAC+TGG | 0.601582 | 6_1:+6387466 | None:intergenic |
| GTGTTCACAAGACTTAATGC+TGG | 0.612270 | 6_1:-6389342 | Msa0871500:CDS |
| CCAACAATGTCAAAGGGTCC+AGG | 0.613260 | 6_1:-6391887 | Msa0871500:exon |
| ACCTGAACTAAAGTCTGGAA+AGG | 0.619670 | 6_1:-6389602 | Msa0871500:intron |
| CTCTTGGATCCATATTCATG+GGG | 0.622127 | 6_1:+6387587 | None:intergenic |
| ATGCATTAATATCACAAAGG+AGG | 0.629994 | 6_1:+6387429 | None:intergenic |
| TGAAGCTAAGAATAGTCTTG+AGG | 0.655550 | 6_1:+6389635 | None:intergenic |
| TTTGTTATTATTGTGTTACG+TGG | 0.674331 | 6_1:-6387615 | Msa0871500:three_prime_UTR |
| CAAGATGTAGCACCAGTTTG+GGG | 0.680110 | 6_1:-6387563 | Msa0871500:three_prime_UTR |
| TAAATGCATTAATATCACAA+AGG | 0.688325 | 6_1:+6387426 | None:intergenic |
| GGTCATCCAGTGTCATGCAA+TGG | 0.695116 | 6_1:-6387472 | Msa0871500:three_prime_UTR |
| AATAATGTAGTTGCTCTCGG+TGG | 0.754602 | 6_1:-6389393 | Msa0871500:CDS |
| TGTCACTACTGATATCAAGG+TGG | 0.758087 | 6_1:-6390553 | Msa0871500:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTAAAAAAAATTAAAAT+TGG | + | chr6_1:6387519-6387538 | None:intergenic | 0.0% |
| !! | AAAAAAATTAAAATTGGATT+CGG | + | chr6_1:6387513-6387532 | None:intergenic | 10.0% |
| !!! | GAAAAATAAAAGATTTTTTT+GGG | - | chr6_1:6387784-6387803 | Msa0871500:three_prime_UTR | 10.0% |
| !! | TCTATATAATGATTAATAAT+TGG | - | chr6_1:6389554-6389573 | Msa0871500:intron | 10.0% |
| !!! | ATTTTTTATAGGATATAAAA+TGG | + | chr6_1:6391804-6391823 | None:intergenic | 10.0% |
| !!! | TTATTTGTTATTTGAGTAAT+TGG | - | chr6_1:6387737-6387756 | Msa0871500:three_prime_UTR | 15.0% |
| !!! | TATTTGTTATTTGAGTAATT+GGG | - | chr6_1:6387738-6387757 | Msa0871500:three_prime_UTR | 15.0% |
| !!! | GGAAAAATAAAAGATTTTTT+TGG | - | chr6_1:6387783-6387802 | Msa0871500:three_prime_UTR | 15.0% |
| !!! | TGTATTATTGATTATTATAG+TGG | - | chr6_1:6387816-6387835 | Msa0871500:three_prime_UTR | 15.0% |
| !!! | TTTTTCTTTTAATTTGTTGT+TGG | - | chr6_1:6388232-6388251 | Msa0871500:intron | 15.0% |
| !!! | TTTTCTTTTAATTTGTTGTT+GGG | - | chr6_1:6388233-6388252 | Msa0871500:intron | 15.0% |
| !!! | TGTTTATTGTTATTGTTATT+TGG | - | chr6_1:6388259-6388278 | Msa0871500:intron | 15.0% |
| !! | TTATAAAACAATAAAAACTG+TGG | + | chr6_1:6388904-6388923 | None:intergenic | 15.0% |
| !! | CAAATAAAAAATAATACACA+AGG | + | chr6_1:6389466-6389485 | None:intergenic | 15.0% |
| !! | AATAAAGATACAAATAGAAT+GGG | + | chr6_1:6389587-6389606 | None:intergenic | 15.0% |
| !! | AAATAAAGATACAAATAGAA+TGG | + | chr6_1:6389588-6389607 | None:intergenic | 15.0% |
| !!! | TAAATTTTAGATATTCTACA+GGG | + | chr6_1:6391001-6391020 | None:intergenic | 15.0% |
| !!! | TTAAATTTTAGATATTCTAC+AGG | + | chr6_1:6391002-6391021 | None:intergenic | 15.0% |
| !! | AAACTGATTAAAATTTGTAT+GGG | - | chr6_1:6391113-6391132 | Msa0871500:intron | 15.0% |
| !!! | AGAAATTTTGACTAATATTG+TGG | - | chr6_1:6387559-6387578 | Msa0871500:three_prime_UTR | 20.0% |
| !!! | TTTTAGGATGATTGTTTTAT+TGG | - | chr6_1:6387762-6387781 | Msa0871500:three_prime_UTR | 20.0% |
| !!! | AAATAAAAGATTTTTTTGGG+TGG | - | chr6_1:6387787-6387806 | Msa0871500:three_prime_UTR | 20.0% |
| !! | TAAGCTAAAAAATAAGTCAA+TGG | - | chr6_1:6388062-6388081 | Msa0871500:CDS | 20.0% |
| !! | GATTAAAAAAATCCAACAAT+TGG | + | chr6_1:6388118-6388137 | None:intergenic | 20.0% |
| !!! | TTTCTTTTAATTTGTTGTTG+GGG | - | chr6_1:6388234-6388253 | Msa0871500:intron | 20.0% |
| !! | AAATGTAGAGATTAATGATT+TGG | - | chr6_1:6388303-6388322 | Msa0871500:intron | 20.0% |
| !!! | TAATGATTTGGATTGAAATA+TGG | - | chr6_1:6388315-6388334 | Msa0871500:intron | 20.0% |
| !!! | AATGATTTGGATTGAAATAT+GGG | - | chr6_1:6388316-6388335 | Msa0871500:intron | 20.0% |
| !!! | AATTTGAAATTTAAGCTAGA+AGG | - | chr6_1:6389051-6389070 | Msa0871500:intron | 20.0% |
| !! | AGTTATAGTGCAATAAATAT+TGG | + | chr6_1:6389367-6389386 | None:intergenic | 20.0% |
| !!! | ATTGCACTATAACTATTTTT+AGG | - | chr6_1:6389373-6389392 | Msa0871500:CDS | 20.0% |
| !! | TTGTTTATCAAATTAGTGAA+TGG | + | chr6_1:6389796-6389815 | None:intergenic | 20.0% |
| !! | AAAAAAAAACACTGATAAAC+AGG | + | chr6_1:6390710-6390729 | None:intergenic | 20.0% |
| !!! | TAAAAGTGAAGTTTTATTGA+AGG | + | chr6_1:6390735-6390754 | None:intergenic | 20.0% |
| !!! | AAAATGAAATTCACTTTTGA+AGG | + | chr6_1:6390949-6390968 | None:intergenic | 20.0% |
| !!! | AAATTTTAGATATTCTACAG+GGG | + | chr6_1:6391000-6391019 | None:intergenic | 20.0% |
| !! | CAAAATCACTTTATTCTAAT+CGG | + | chr6_1:6391046-6391065 | None:intergenic | 20.0% |
| !! | GAAACTGATTAAAATTTGTA+TGG | - | chr6_1:6391112-6391131 | Msa0871500:intron | 20.0% |
| !! | AACTGATTAAAATTTGTATG+GGG | - | chr6_1:6391114-6391133 | Msa0871500:intron | 20.0% |
| !!! | CTATGATGAGAATTTTTTAT+AGG | + | chr6_1:6391815-6391834 | None:intergenic | 20.0% |
| !! | CTATAAAAAATTCTCATCAT+AGG | - | chr6_1:6391813-6391832 | Msa0871500:intron | 20.0% |
| !! | TCATCATAGGTAAATTAATA+TGG | - | chr6_1:6391826-6391845 | Msa0871500:intron | 20.0% |
| !! | TAAATGCATTAATATCACAA+AGG | + | chr6_1:6391896-6391915 | None:intergenic | 20.0% |
| ! | ATGAAGAAGAAGAAGAATTA+GGG | + | chr6_1:6387391-6387410 | None:intergenic | 25.0% |
| !! | ATTTGAGTAATTGGGTTTTT+AGG | - | chr6_1:6387746-6387765 | Msa0871500:three_prime_UTR | 25.0% |
| ! | AAAAATCCAACAATTGGAAA+GGG | + | chr6_1:6388112-6388131 | None:intergenic | 25.0% |
| ! | AAAAAATCCAACAATTGGAA+AGG | + | chr6_1:6388113-6388132 | None:intergenic | 25.0% |
| !!! | TGGATTTTTTTAATCTGAGT+TGG | - | chr6_1:6388123-6388142 | Msa0871500:CDS | 25.0% |
| !!! | GGATTTTTTTAATCTGAGTT+GGG | - | chr6_1:6388124-6388143 | Msa0871500:CDS | 25.0% |
| ! | CTTGATTGTATTCAATTTGT+GGG | - | chr6_1:6388415-6388434 | Msa0871500:intron | 25.0% |
| !! | CCTGAATTAATTTGAGAAAA+TGG | + | chr6_1:6388630-6388649 | None:intergenic | 25.0% |
| !! | CCATTTTCTCAAATTAATTC+AGG | - | chr6_1:6388627-6388646 | Msa0871500:intron | 25.0% |
| !!! | TTTTTTATTCACTGTTCTGT+TGG | - | chr6_1:6388842-6388861 | Msa0871500:intron | 25.0% |
| ! | ATTAAGTAGTTAAACTAGCA+CGG | + | chr6_1:6389034-6389053 | None:intergenic | 25.0% |
| ! | CATCAATTAGTAAATGATGT+TGG | + | chr6_1:6389116-6389135 | None:intergenic | 25.0% |
| ! | CATCATTTACTAATTGATGA+TGG | - | chr6_1:6389117-6389136 | Msa0871500:intron | 25.0% |
| ! | ATTTGTAGCCAGTTAATAAT+TGG | - | chr6_1:6389481-6389500 | Msa0871500:CDS | 25.0% |
| ! | TTACATTGCCAATTATTAAC+TGG | + | chr6_1:6389492-6389511 | None:intergenic | 25.0% |
| ! | TCTACTTACTTAAATAGCAT+TGG | + | chr6_1:6390333-6390352 | None:intergenic | 25.0% |
| ! | TCGTACAATTACAAATGAAT+TGG | - | chr6_1:6390495-6390514 | Msa0871500:intron | 25.0% |
| !!! | TTCATCATTTTTTACCTTGA+AGG | - | chr6_1:6390762-6390781 | Msa0871500:intron | 25.0% |
| ! | TCAATAAAATTCTCTTGCTT+AGG | - | chr6_1:6391080-6391099 | Msa0871500:intron | 25.0% |
| ! | TTAAAATTTGTATGGGGATA+TGG | - | chr6_1:6391120-6391139 | Msa0871500:intron | 25.0% |
| !!! | AATTTTGAGCAAATTTGTTG+AGG | - | chr6_1:6391467-6391486 | Msa0871500:intron | 25.0% |
| !! | TTTTCTATCAAGACTGAATT+TGG | - | chr6_1:6391511-6391530 | Msa0871500:intron | 25.0% |
| !!! | TTTGTTATTATTGTGTTACG+TGG | - | chr6_1:6391704-6391723 | Msa0871500:CDS | 25.0% |
| ! | ACTACATTTGAATCATAATC+AGG | + | chr6_1:6391919-6391938 | None:intergenic | 25.0% |
| !! | TTCAAATGTAGTAGTCTTTT+TGG | - | chr6_1:6391927-6391946 | Msa0871500:five_prime_UTR | 25.0% |
| !!! | AATTAGGGTTTTGAAGTGAA+CGG | + | chr6_1:6387376-6387395 | None:intergenic | 30.0% |
| GATGAAGAAGAAGAAGAATT+AGG | + | chr6_1:6387392-6387411 | None:intergenic | 30.0% | |
| TATTGCAGATCTTCTTTACA+AGG | - | chr6_1:6387595-6387614 | Msa0871500:three_prime_UTR | 30.0% | |
| AAAAAACTCACAATTCCAGT+AGG | + | chr6_1:6387662-6387681 | None:intergenic | 30.0% | |
| TATTATAGTGGTAGCAATGT+CGG | - | chr6_1:6387828-6387847 | Msa0871500:three_prime_UTR | 30.0% | |
| TTATGTTCATAAGCTTGTCA+AGG | - | chr6_1:6387936-6387955 | Msa0871500:CDS | 30.0% | |
| !!! | TTTTTTCCCTTTCCAATTGT+TGG | - | chr6_1:6388103-6388122 | Msa0871500:CDS | 30.0% |
| ! | AGTTGGGATGATTTTTGTAT+TGG | - | chr6_1:6388140-6388159 | Msa0871500:CDS | 30.0% |
| AAGATTTGTAGATGCATGAA+AGG | - | chr6_1:6388163-6388182 | Msa0871500:CDS | 30.0% | |
| !!! | TGTTGTGATTTTTTGTGAAG+TGG | - | chr6_1:6388193-6388212 | Msa0871500:intron | 30.0% |
| TGGGTTATGATAGAACATTA+TGG | - | chr6_1:6388335-6388354 | Msa0871500:intron | 30.0% | |
| GCTTGATTGTATTCAATTTG+TGG | - | chr6_1:6388414-6388433 | Msa0871500:intron | 30.0% | |
| GACATGATACTTTAGATTGA+AGG | - | chr6_1:6388528-6388547 | Msa0871500:intron | 30.0% | |
| GTAAGTTCATGATTCTTTCT+CGG | - | chr6_1:6388803-6388822 | Msa0871500:intron | 30.0% | |
| !!! | GTTTTCTGTTTAACTTGTCA+TGG | - | chr6_1:6388864-6388883 | Msa0871500:intron | 30.0% |
| !! | TGCGTATTTGTTATACAGTT+GGG | - | chr6_1:6388975-6388994 | Msa0871500:intron | 30.0% |
| !! | TATTTGTTATACAGTTGGGT+TGG | - | chr6_1:6388979-6388998 | Msa0871500:intron | 30.0% |
| !! | ATTTGTTATACAGTTGGGTT+GGG | - | chr6_1:6388980-6388999 | Msa0871500:intron | 30.0% |
| GGTAACCTAATCAAAATTGA+GGG | + | chr6_1:6389012-6389031 | None:intergenic | 30.0% | |
| TTAAGTAGTTAAACTAGCAC+GGG | + | chr6_1:6389033-6389052 | None:intergenic | 30.0% | |
| ! | TCTATTTTACATCTGCCATA+TGG | + | chr6_1:6389078-6389097 | None:intergenic | 30.0% |
| AAAGTATGTCACTGCAAAAT+TGG | - | chr6_1:6389168-6389187 | Msa0871500:intron | 30.0% | |
| GAGAGACATACTATAAAGTA+GGG | + | chr6_1:6389249-6389268 | None:intergenic | 30.0% | |
| AGAGAGACATACTATAAAGT+AGG | + | chr6_1:6389250-6389269 | None:intergenic | 30.0% | |
| ATAATTGGCAATGTAAAGCA+CGG | - | chr6_1:6389496-6389515 | Msa0871500:intron | 30.0% | |
| AACAAATTACCGTATGAAAC+AGG | - | chr6_1:6389811-6389830 | Msa0871500:intron | 30.0% | |
| TGTTAAACAACAACACATGT+TGG | - | chr6_1:6390392-6390411 | Msa0871500:intron | 30.0% | |
| AAACAGACAACTCAGAAAAT+AGG | + | chr6_1:6390613-6390632 | None:intergenic | 30.0% | |
| !!! | TCATTTTTTACCTTGAAGGA+CGG | - | chr6_1:6390766-6390785 | Msa0871500:intron | 30.0% |
| !! | CTTCATATTTTAAGCAGCTT+TGG | + | chr6_1:6390876-6390895 | None:intergenic | 30.0% |
| TATTCTAATCGGTAACAAAC+AGG | + | chr6_1:6391035-6391054 | None:intergenic | 30.0% | |
| ! | GAAATGGTGAAGAATGATTT+TGG | + | chr6_1:6391373-6391392 | None:intergenic | 30.0% |
| AAATCATTCTTCACCATTTC+TGG | - | chr6_1:6391373-6391392 | Msa0871500:intron | 30.0% | |
| !!! | ACTGAATTTGGTGTTTTTTG+AGG | - | chr6_1:6391523-6391542 | Msa0871500:intron | 30.0% |
| !!! | AATTTGGTGTTTTTTGAGGT+TGG | - | chr6_1:6391527-6391546 | Msa0871500:intron | 30.0% |
| !! | TTTGAGGTTGGTTCTATTAT+TGG | - | chr6_1:6391539-6391558 | Msa0871500:intron | 30.0% |
| ! | TGGGGCATTATTCAATAATT+TGG | - | chr6_1:6391774-6391793 | Msa0871500:intron | 30.0% |
| ! | GGGGCATTATTCAATAATTT+GGG | - | chr6_1:6391775-6391794 | Msa0871500:intron | 30.0% |
| ATGCATTAATATCACAAAGG+AGG | + | chr6_1:6391893-6391912 | None:intergenic | 30.0% | |
| GTTGGTTGTTGAGAGAAAAT+TGG | + | chr6_1:6387417-6387436 | None:intergenic | 35.0% | |
| TCAACAACCAACAATGTCAA+AGG | - | chr6_1:6387425-6387444 | Msa0871500:three_prime_UTR | 35.0% | |
| CAACAACCAACAATGTCAAA+GGG | - | chr6_1:6387426-6387445 | Msa0871500:three_prime_UTR | 35.0% | |
| TGTGGTGTAAGTGAGATTAT+AGG | - | chr6_1:6387852-6387871 | Msa0871500:three_prime_UTR | 35.0% | |
| AGTGAGATTATAGGTCTGTT+TGG | - | chr6_1:6387861-6387880 | Msa0871500:exon | 35.0% | |
| GATTATAGGTCTGTTTGGAT+CGG | - | chr6_1:6387866-6387885 | Msa0871500:exon | 35.0% | |
| ACAACATTGCTATCACTTAG+GGG | + | chr6_1:6388384-6388403 | None:intergenic | 35.0% | |
| CACAACATTGCTATCACTTA+GGG | + | chr6_1:6388385-6388404 | None:intergenic | 35.0% | |
| TCAATTTGTGGGTGTGTTTA+TGG | - | chr6_1:6388426-6388445 | Msa0871500:intron | 35.0% | |
| ! | ATGCTTGATTGATAGCAATG+CGG | - | chr6_1:6388480-6388499 | Msa0871500:intron | 35.0% |
| CATAAACAGCCACAAAAAGA+GGG | + | chr6_1:6388669-6388688 | None:intergenic | 35.0% | |
| CAAAAAAAGCTCACCTTTCT+TGG | + | chr6_1:6388714-6388733 | None:intergenic | 35.0% | |
| !!! | CAAGAAAGGTGAGCTTTTTT+TGG | - | chr6_1:6388712-6388731 | Msa0871500:intron | 35.0% |
| GAATGTCACTACTGATATCA+AGG | - | chr6_1:6388763-6388782 | Msa0871500:intron | 35.0% | |
| !! | GTGCGTATTTGTTATACAGT+TGG | - | chr6_1:6388974-6388993 | Msa0871500:intron | 35.0% |
| GGGTAACCTAATCAAAATTG+AGG | + | chr6_1:6389013-6389032 | None:intergenic | 35.0% | |
| TTTAAGCTAGAAGGTCCATA+TGG | - | chr6_1:6389060-6389079 | Msa0871500:intron | 35.0% | |
| ATGTCACTGCAAAATTGGAA+TGG | - | chr6_1:6389173-6389192 | Msa0871500:intron | 35.0% | |
| ACTGCAAAATTGGAATGGAA+AGG | - | chr6_1:6389178-6389197 | Msa0871500:intron | 35.0% | |
| ! | TGAAGCTAAGAATAGTCTTG+AGG | + | chr6_1:6389687-6389706 | None:intergenic | 35.0% |
| TCAAGACTATTCTTAGCTTC+AGG | - | chr6_1:6389686-6389705 | Msa0871500:intron | 35.0% | |
| TAGATTCTTTCAGTCTCCAA+TGG | - | chr6_1:6389764-6389783 | Msa0871500:intron | 35.0% | |
| TCCAATAACACCAGAAAAGT+TGG | + | chr6_1:6389906-6389925 | None:intergenic | 35.0% | |
| GGAAATAATGTAGTTGCTCT+CGG | - | chr6_1:6389923-6389942 | Msa0871500:intron | 35.0% | |
| CTTTCTTATGACACCAAAAC+TGG | - | chr6_1:6389953-6389972 | Msa0871500:intron | 35.0% | |
| TACATGAGTCAATGTTGTGT+CGG | - | chr6_1:6390229-6390248 | Msa0871500:intron | 35.0% | |
| ! | GTGCGTTTAATCTGAAATGT+TGG | - | chr6_1:6390424-6390443 | Msa0871500:intron | 35.0% |
| ! | TAGCATTTTGTGAACTTGAG+AGG | - | chr6_1:6390552-6390571 | Msa0871500:CDS | 35.0% |
| ATAAACACACCTAATCCCAT+AGG | - | chr6_1:6390847-6390866 | Msa0871500:intron | 35.0% | |
| ! | TAGTAATGGGATTGACTACA+TGG | + | chr6_1:6391195-6391214 | None:intergenic | 35.0% |
| !!! | CCAACAGCTGTTTTAGTAAT+GGG | + | chr6_1:6391208-6391227 | None:intergenic | 35.0% |
| !!! | TCCAACAGCTGTTTTAGTAA+TGG | + | chr6_1:6391209-6391228 | None:intergenic | 35.0% |
| ! | AAGTGTGAGTGTGTTTTCTT+TGG | + | chr6_1:6391257-6391276 | None:intergenic | 35.0% |
| AAAGAAAACACACTCACACT+TGG | - | chr6_1:6391256-6391275 | Msa0871500:intron | 35.0% | |
| AAGCTTCGATTCAACAACTT+CGG | - | chr6_1:6391313-6391332 | Msa0871500:intron | 35.0% | |
| AATTCTTGCACTCTTCTCAA+TGG | + | chr6_1:6391416-6391435 | None:intergenic | 35.0% | |
| ! | ATTGAGAAGAGTGCAAGAAT+TGG | - | chr6_1:6391415-6391434 | Msa0871500:intron | 35.0% |
| TGCAAGAATTGGAATAGCTT+TGG | - | chr6_1:6391426-6391445 | Msa0871500:intron | 35.0% | |
| TTTGCTCAAAATTCCTCTCA+AGG | + | chr6_1:6391460-6391479 | None:intergenic | 35.0% | |
| ACTCTTGGATCCATATTCAT+GGG | + | chr6_1:6391736-6391755 | None:intergenic | 35.0% | |
| TATTGAATAATGCCCCAAAC+TGG | + | chr6_1:6391771-6391790 | None:intergenic | 35.0% | |
| AAGTAGTGAGAGTGAACTTC+TGG | + | chr6_1:6387634-6387653 | None:intergenic | 40.0% | |
| CTCACTACTTATTCACCTAC+TGG | - | chr6_1:6387644-6387663 | Msa0871500:three_prime_UTR | 40.0% | |
| GCACAACATTGCTATCACTT+AGG | + | chr6_1:6388386-6388405 | None:intergenic | 40.0% | |
| GTGTTTATGGTTTGACCAGT+TGG | - | chr6_1:6388439-6388458 | Msa0871500:intron | 40.0% | |
| CAGTTCATCACAAAACCAAC+TGG | + | chr6_1:6388457-6388476 | None:intergenic | 40.0% | |
| ! | CTTTAGATTGAAGGTGTGTC+TGG | - | chr6_1:6388537-6388556 | Msa0871500:intron | 40.0% |
| ! | AATTCAGGCTTTGACTCCTT+TGG | - | chr6_1:6388642-6388661 | Msa0871500:intron | 40.0% |
| GCATAAACAGCCACAAAAAG+AGG | + | chr6_1:6388670-6388689 | None:intergenic | 40.0% | |
| ! | CTTTTTGTGGCTGTTTATGC+AGG | - | chr6_1:6388670-6388689 | Msa0871500:intron | 40.0% |
| TGTCACTACTGATATCAAGG+TGG | - | chr6_1:6388766-6388785 | Msa0871500:intron | 40.0% | |
| TTCATGATTCTTTCTCGGCT+GGG | - | chr6_1:6388808-6388827 | Msa0871500:intron | 40.0% | |
| CCTAATCAAAATTGAGGGAG+TGG | + | chr6_1:6389007-6389026 | None:intergenic | 40.0% | |
| !!! | CCACTCCCTCAATTTTGATT+AGG | - | chr6_1:6389004-6389023 | Msa0871500:intron | 40.0% |
| ! | AAATTGGAATGGAAAGGCGT+TGG | - | chr6_1:6389184-6389203 | Msa0871500:intron | 40.0% |
| AGATGCAAACAGTCGAGATA+AGG | - | chr6_1:6389404-6389423 | Msa0871500:CDS | 40.0% | |
| GATGCAAACAGTCGAGATAA+GGG | - | chr6_1:6389405-6389424 | Msa0871500:CDS | 40.0% | |
| ATGCAAACAGTCGAGATAAG+GGG | - | chr6_1:6389406-6389425 | Msa0871500:CDS | 40.0% | |
| GATCGACAGATATTGATGTG+TGG | + | chr6_1:6389536-6389555 | None:intergenic | 40.0% | |
| ACCTGAACTAAAGTCTGGAA+AGG | - | chr6_1:6389717-6389736 | Msa0871500:intron | 40.0% | |
| ! | ACCTTTCCAGACTTTAGTTC+AGG | + | chr6_1:6389721-6389740 | None:intergenic | 40.0% |
| TAGTGAATGGTGCTTTCCAT+TGG | + | chr6_1:6389783-6389802 | None:intergenic | 40.0% | |
| GAACTTCAGCCTGTTTCATA+CGG | + | chr6_1:6389823-6389842 | None:intergenic | 40.0% | |
| AGTACTTGCATGACTATGCT+GGG | - | chr6_1:6389843-6389862 | Msa0871500:intron | 40.0% | |
| ! | AACCCAATTGCCAACTTTTC+TGG | - | chr6_1:6389893-6389912 | Msa0871500:intron | 40.0% |
| CACCAGAAAAGTTGGCAATT+GGG | + | chr6_1:6389898-6389917 | None:intergenic | 40.0% | |
| ACACCAGAAAAGTTGGCAAT+TGG | + | chr6_1:6389899-6389918 | None:intergenic | 40.0% | |
| !!! | GCCAACTTTTCTGGTGTTAT+TGG | - | chr6_1:6389902-6389921 | Msa0871500:intron | 40.0% |
| AATAATGTAGTTGCTCTCGG+TGG | - | chr6_1:6389926-6389945 | Msa0871500:intron | 40.0% | |
| GTGTTCACAAGACTTAATGC+TGG | - | chr6_1:6389977-6389996 | Msa0871500:intron | 40.0% | |
| CGAAGCAATCAAATCGTCTT+TGG | + | chr6_1:6390014-6390033 | None:intergenic | 40.0% | |
| ACATGTAAATGCTAGTGTCG+TGG | + | chr6_1:6390305-6390324 | None:intergenic | 40.0% | |
| TACACGAGTCAATGTTGTGT+CGG | - | chr6_1:6390369-6390388 | Msa0871500:intron | 40.0% | |
| CAACCTTACCTAGTTAGATG+TGG | - | chr6_1:6390642-6390661 | Msa0871500:intron | 40.0% | |
| ATGCCACATCTAACTAGGTA+AGG | + | chr6_1:6390648-6390667 | None:intergenic | 40.0% | |
| CTGTAATGCCACATCTAACT+AGG | + | chr6_1:6390653-6390672 | None:intergenic | 40.0% | |
| ! | ATGGTAGTACGAAGCATTCA+GGG | + | chr6_1:6391176-6391195 | None:intergenic | 40.0% |
| CCCATTACTAAAACAGCTGT+TGG | - | chr6_1:6391205-6391224 | Msa0871500:intron | 40.0% | |
| !! | ATTCTTCACCATTTCTGGTG+AGG | - | chr6_1:6391378-6391397 | Msa0871500:intron | 40.0% |
| GTTGAGGTAGTCATTAGCAA+AGG | - | chr6_1:6391483-6391502 | Msa0871500:intron | 40.0% | |
| CTCTTGGATCCATATTCATG+GGG | + | chr6_1:6391735-6391754 | None:intergenic | 40.0% | |
| GACTCTTGGATCCATATTCA+TGG | + | chr6_1:6391737-6391756 | None:intergenic | 40.0% | |
| TCAAGATGTAGCACCAGTTT+GGG | - | chr6_1:6391755-6391774 | Msa0871500:intron | 40.0% | |
| GTGATAGCAATGTTGTGCTG+TGG | - | chr6_1:6388388-6388407 | Msa0871500:intron | 45.0% | |
| ! | TAGATTGAAGGTGTGTCTGG+TGG | - | chr6_1:6388540-6388559 | Msa0871500:intron | 45.0% |
| ! | TCCTTTGGACCCTCTTTTTG+TGG | - | chr6_1:6388657-6388676 | Msa0871500:intron | 45.0% |
| ACTGCCTCAAGTACCAAGAA+AGG | - | chr6_1:6388698-6388717 | Msa0871500:intron | 45.0% | |
| CTCACCTTTCTTGGTACTTG+AGG | + | chr6_1:6388705-6388724 | None:intergenic | 45.0% | |
| GTTCATGATTCTTTCTCGGC+TGG | - | chr6_1:6388807-6388826 | Msa0871500:intron | 45.0% | |
| GCTTTACTACCGTTGCAAAG+CGG | - | chr6_1:6388928-6388947 | Msa0871500:intron | 45.0% | |
| TCGAGATAAGGGGCAACTTT+AGG | - | chr6_1:6389416-6389435 | Msa0871500:CDS | 45.0% | |
| ! | CTAAGAATAGTCTTGAGGCC+AGG | + | chr6_1:6389682-6389701 | None:intergenic | 45.0% |
| ! | CCAGACTTTAGTTCAGGTTC+AGG | + | chr6_1:6389715-6389734 | None:intergenic | 45.0% |
| CCTGAACCTGAACTAAAGTC+TGG | - | chr6_1:6389712-6389731 | Msa0871500:intron | 45.0% | |
| CAGTACTTGCATGACTATGC+TGG | - | chr6_1:6389842-6389861 | Msa0871500:intron | 45.0% | |
| ! | TCTTGTGAACACGCCAGTTT+TGG | + | chr6_1:6389969-6389988 | None:intergenic | 45.0% |
| TAGTGTCGTGATCAGTGTCA+GGG | + | chr6_1:6390153-6390172 | None:intergenic | 45.0% | |
| TTAGTGTCGTGATCAGTGTC+AGG | + | chr6_1:6390154-6390173 | None:intergenic | 45.0% | |
| ! | AGTCAATGTTGTGTCGGTGT+CGG | - | chr6_1:6390235-6390254 | Msa0871500:intron | 45.0% |
| TGTCGGACAACAACACATGT+TGG | - | chr6_1:6390252-6390271 | Msa0871500:intron | 45.0% | |
| ! | TCTGAAATGTTGGTGCGTTG+TGG | - | chr6_1:6390434-6390453 | Msa0871500:intron | 45.0% |
| TTGTCAGAATCCGTCCTTCA+AGG | + | chr6_1:6390779-6390798 | None:intergenic | 45.0% | |
| CTTTGGACACCTATGGGATT+AGG | + | chr6_1:6390859-6390878 | None:intergenic | 45.0% | |
| !! | AAGCAGCTTTGGACACCTAT+GGG | + | chr6_1:6390865-6390884 | None:intergenic | 45.0% |
| !! | TAAGCAGCTTTGGACACCTA+TGG | + | chr6_1:6390866-6390885 | None:intergenic | 45.0% |
| GGGATATGGTAAATGCATGC+AGG | - | chr6_1:6391134-6391153 | Msa0871500:intron | 45.0% | |
| ! | CATGGTAGTACGAAGCATTC+AGG | + | chr6_1:6391177-6391196 | None:intergenic | 45.0% |
| TAAAACAGCTGTTGGAGCTG+AGG | - | chr6_1:6391213-6391232 | Msa0871500:intron | 45.0% | |
| TCGATTCAACAACTTCGGAC+TGG | - | chr6_1:6391318-6391337 | Msa0871500:intron | 45.0% | |
| !! | TTTGGCTCTCAAACCTTGAG+AGG | - | chr6_1:6391444-6391463 | Msa0871500:intron | 45.0% |
| !! | TGGTGCTACATCTTGACTCT+TGG | + | chr6_1:6391751-6391770 | None:intergenic | 45.0% |
| GTCAAGATGTAGCACCAGTT+TGG | - | chr6_1:6391754-6391773 | Msa0871500:intron | 45.0% | |
| CAAGATGTAGCACCAGTTTG+GGG | - | chr6_1:6391756-6391775 | Msa0871500:intron | 45.0% | |
| TAGTCACCATTGCATGACAC+TGG | + | chr6_1:6391856-6391875 | None:intergenic | 45.0% | |
| CCTGGACCCTTTGACATTGT+TGG | + | chr6_1:6387435-6387454 | None:intergenic | 50.0% | |
| CCAACAATGTCAAAGGGTCC+AGG | - | chr6_1:6387432-6387451 | Msa0871500:three_prime_UTR | 50.0% | |
| CCAGGTCTCTACTCTGACAT+CGG | - | chr6_1:6387450-6387469 | Msa0871500:three_prime_UTR | 50.0% | |
| GACATCGGCAAAAAAGCCAG+AGG | - | chr6_1:6387465-6387484 | Msa0871500:three_prime_UTR | 50.0% | |
| !! | AGTGAGAAAGAGGGTACCTC+TGG | + | chr6_1:6387484-6387503 | None:intergenic | 50.0% |
| CGGAGAGAGAGTGAGAAAGA+GGG | + | chr6_1:6387493-6387512 | None:intergenic | 50.0% | |
| TCGGAGAGAGAGTGAGAAAG+AGG | + | chr6_1:6387494-6387513 | None:intergenic | 50.0% | |
| ! | AGTGGTAGCAATGTCGGTTG+TGG | - | chr6_1:6387834-6387853 | Msa0871500:three_prime_UTR | 50.0% |
| TCACTTAGGGGTCAGCTACA+TGG | + | chr6_1:6388372-6388391 | None:intergenic | 50.0% | |
| GCCACAAAAAGAGGGTCCAA+AGG | + | chr6_1:6388661-6388680 | None:intergenic | 50.0% | |
| ! | ACCGTTGCAAAGCGGCTTTT+TGG | - | chr6_1:6388936-6388955 | Msa0871500:intron | 50.0% |
| ! | GCCAAAAAGCCGCTTTGCAA+CGG | + | chr6_1:6388940-6388959 | None:intergenic | 50.0% |
| ACTGTTAATGAGCCAGCTCC+TGG | - | chr6_1:6389661-6389680 | Msa0871500:CDS | 50.0% | |
| !! | GTTTGCTGTCAACCCAATGC+TGG | + | chr6_1:6389876-6389895 | None:intergenic | 50.0% |
| TAGTGTCGTGGTCAGTGTCA+TGG | + | chr6_1:6390293-6390312 | None:intergenic | 50.0% | |
| TTGGTGCGTTGTGGTAGCTT+TGG | - | chr6_1:6390443-6390462 | Msa0871500:intron | 50.0% | |
| !! | AACAACTTCGGACTGGCAAG+CGG | - | chr6_1:6391325-6391344 | Msa0871500:intron | 50.0% |
| !! | CTTCACCATTTCTGGTGAGG+TGG | - | chr6_1:6391381-6391400 | Msa0871500:intron | 50.0% |
| TGCACTCTTCTCAATGGCCT+TGG | + | chr6_1:6391410-6391429 | None:intergenic | 50.0% | |
| GTGGTTGTGCCCCATGAATA+TGG | - | chr6_1:6391723-6391742 | Msa0871500:intron | 50.0% | |
| GGTCATCCAGTGTCATGCAA+TGG | - | chr6_1:6391847-6391866 | Msa0871500:intron | 50.0% | |
| CCGATGTCAGAGTAGAGACC+TGG | + | chr6_1:6387453-6387472 | None:intergenic | 55.0% | |
| ! | ATAGTCTTGAGGCCAGGAGC+TGG | + | chr6_1:6389676-6389695 | None:intergenic | 55.0% |
| CTGGGATTTCCGCCAGCATT+GGG | - | chr6_1:6389861-6389880 | Msa0871500:intron | 55.0% | |
| TGCTGTCAACCCAATGCTGG+CGG | + | chr6_1:6389873-6389892 | None:intergenic | 55.0% | |
| ! | ATTTTGGACGCCACTCGTGC+TGG | + | chr6_1:6391357-6391376 | None:intergenic | 55.0% |
| GGTGTCCACCTCACCAGAAA+TGG | + | chr6_1:6391389-6391408 | None:intergenic | 55.0% | |
| TTCTGGTGAGGTGGACACCA+AGG | - | chr6_1:6391390-6391409 | Msa0871500:intron | 55.0% | |
| GCTGGGATTTCCGCCAGCAT+TGG | - | chr6_1:6389860-6389879 | Msa0871500:intron | 60.0% | |
| GCGGTCTCATCCAGCACGAG+TGG | - | chr6_1:6391344-6391363 | Msa0871500:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 6387368 | 6391973 | 6387368 | ID=Msa0871500;Name=Msa0871500 |
| chr6_1 | mRNA | 6387368 | 6391973 | 6387368 | ID=Msa0871500-mRNA-1;Parent=Msa0871500;Name=Msa0871500-mRNA-1;_AED=0.04;_eAED=0.04;_QI=70|1|1|1|0.83|0.71|7|482|278 |
| chr6_1 | exon | 6387368 | 6387506 | 6387368 | ID=Msa0871500-mRNA-1:exon:2038;Parent=Msa0871500-mRNA-1 |
| chr6_1 | exon | 6387536 | 6388185 | 6387536 | ID=Msa0871500-mRNA-1:exon:2037;Parent=Msa0871500-mRNA-1 |
| chr6_1 | exon | 6389300 | 6389508 | 6389300 | ID=Msa0871500-mRNA-1:exon:2036;Parent=Msa0871500-mRNA-1 |
| chr6_1 | exon | 6389603 | 6389695 | 6389603 | ID=Msa0871500-mRNA-1:exon:2035;Parent=Msa0871500-mRNA-1 |
| chr6_1 | exon | 6390539 | 6390649 | 6390539 | ID=Msa0871500-mRNA-1:exon:2034;Parent=Msa0871500-mRNA-1 |
| chr6_1 | exon | 6391671 | 6391738 | 6391671 | ID=Msa0871500-mRNA-1:exon:2033;Parent=Msa0871500-mRNA-1 |
| chr6_1 | exon | 6391855 | 6391973 | 6391855 | ID=Msa0871500-mRNA-1:exon:2032;Parent=Msa0871500-mRNA-1 |
| chr6_1 | five_prime_UTR | 6391904 | 6391973 | 6391904 | ID=Msa0871500-mRNA-1:five_prime_utr;Parent=Msa0871500-mRNA-1 |
| chr6_1 | CDS | 6391855 | 6391903 | 6391855 | ID=Msa0871500-mRNA-1:cds;Parent=Msa0871500-mRNA-1 |
| chr6_1 | CDS | 6391671 | 6391738 | 6391671 | ID=Msa0871500-mRNA-1:cds;Parent=Msa0871500-mRNA-1 |
| chr6_1 | CDS | 6390539 | 6390649 | 6390539 | ID=Msa0871500-mRNA-1:cds;Parent=Msa0871500-mRNA-1 |
| chr6_1 | CDS | 6389603 | 6389695 | 6389603 | ID=Msa0871500-mRNA-1:cds;Parent=Msa0871500-mRNA-1 |
| chr6_1 | CDS | 6389300 | 6389508 | 6389300 | ID=Msa0871500-mRNA-1:cds;Parent=Msa0871500-mRNA-1 |
| chr6_1 | CDS | 6387879 | 6388185 | 6387879 | ID=Msa0871500-mRNA-1:cds;Parent=Msa0871500-mRNA-1 |
| chr6_1 | three_prime_UTR | 6387536 | 6387878 | 6387536 | ID=Msa0871500-mRNA-1:three_prime_utr;Parent=Msa0871500-mRNA-1 |
| chr6_1 | three_prime_UTR | 6387368 | 6387506 | 6387368 | ID=Msa0871500-mRNA-1:three_prime_utr;Parent=Msa0871500-mRNA-1 |
| Gene Sequence |
| Protein sequence |
