AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0872240

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0872240 MtrunA17_Chr6g0453551 92.405 316 8 1 1 300 1 316 0.0 609
Msa0872240 MtrunA17_Chr7g0217941 75.000 316 63 1 1 300 1 316 0.0 508
Msa0872240 MtrunA17_Chr6g0487101 42.574 303 145 7 1 280 79 375 3.13e-75 235
Msa0872240 MtrunA17_Chr8g0389771 40.767 287 148 4 14 280 88 372 2.07e-74 233
Msa0872240 MtrunA17_Chr1g0194311 39.456 294 155 6 6 280 74 363 4.77e-64 206
Msa0872240 MtrunA17_Chr7g0258341 39.145 304 145 5 6 280 90 382 1.58e-62 202
Msa0872240 MtrunA17_Chr5g0446301 38.966 290 152 7 12 280 67 352 1.36e-58 191
Msa0872240 MtrunA17_Chr5g0399221 35.621 306 169 7 5 289 62 360 2.39e-57 188
Msa0872240 MtrunA17_Chr8g0345281 33.882 304 161 5 6 279 279 572 5.67e-55 187
Msa0872240 MtrunA17_Chr4g0070051 35.065 308 150 9 5 282 53 340 2.88e-54 180
Msa0872240 MtrunA17_Chr7g0265201 37.829 304 146 6 2 280 95 380 6.46e-54 180
Msa0872240 MtrunA17_Chr8g0351871 35.161 310 154 8 2 282 28 319 1.35e-52 175
Msa0872240 MtrunA17_Chr4g0018371 35.088 285 146 6 6 261 227 501 7.53e-52 178
Msa0872240 MtrunA17_Chr6g0466961 34.576 295 169 4 3 282 36 321 1.44e-51 172
Msa0872240 MtrunA17_Chr4g0069881 34.641 306 159 5 5 279 223 518 7.72e-51 175
Msa0872240 MtrunA17_Chr4g0037751 32.323 297 168 5 5 279 70 355 1.05e-50 171
Msa0872240 MtrunA17_Chr3g0079351 32.827 329 169 10 6 300 215 525 1.40e-50 174
Msa0872240 MtrunA17_Chr3g0079361 33.333 318 163 9 6 289 215 517 3.68e-50 173
Msa0872240 MtrunA17_Chr7g0272141 35.034 294 160 5 8 280 243 526 4.04e-50 174
Msa0872240 MtrunA17_Chr3g0090091 32.024 331 173 10 4 300 214 526 1.03e-49 172
Msa0872240 MtrunA17_Chr3g0079341 32.219 329 171 10 6 300 215 525 2.92e-49 171
Msa0872240 MtrunA17_Chr2g0294321 34.091 308 165 6 6 288 56 350 3.13e-49 167
Msa0872240 MtrunA17_Chr7g0269541 34.641 306 160 6 4 279 244 539 3.61e-49 171
Msa0872240 MtrunA17_Chr5g0420831 30.976 297 172 4 5 279 70 355 1.17e-48 166
Msa0872240 MtrunA17_Chr1g0192321 33.028 327 170 10 6 300 272 581 4.77e-48 169
Msa0872240 MtrunA17_Chr4g0011751 33.226 310 164 8 6 282 176 475 1.73e-47 166
Msa0872240 MtrunA17_Chr4g0069841 32.013 303 166 6 8 280 208 500 3.25e-47 165
Msa0872240 MtrunA17_Chr7g0272151 32.209 326 173 9 6 299 271 580 1.76e-46 164
Msa0872240 MtrunA17_Chr6g0466951 31.757 296 169 6 6 282 69 350 6.05e-46 158
Msa0872240 MtrunA17_Chr2g0295551 29.938 324 181 8 8 299 252 561 8.09e-46 162
Msa0872240 MtrunA17_Chr1g0175661 32.407 324 168 10 5 289 245 556 1.92e-45 161
Msa0872240 MtrunA17_Chr4g0011771 32.822 326 168 10 6 300 206 511 2.45e-45 160
Msa0872240 MtrunA17_Chr1g0192331 32.381 315 169 6 6 286 214 518 6.02e-45 159
Msa0872240 MtrunA17_Chr7g0269521 32.390 318 170 9 5 290 249 553 6.32e-45 160
Msa0872240 MtrunA17_Chr7g0269511 32.390 318 170 8 5 290 251 555 1.58e-44 159
Msa0872240 MtrunA17_Chr1g0195301 33.025 324 167 11 10 300 247 553 2.57e-44 158
Msa0872240 MtrunA17_Chr1g0195321 33.025 324 167 11 10 300 247 553 2.57e-44 158
Msa0872240 MtrunA17_Chr4g0069861 31.788 302 166 6 8 279 209 500 4.53e-44 157
Msa0872240 MtrunA17_Chr3g0126771 32.026 306 165 8 6 279 286 580 5.06e-44 158
Msa0872240 MtrunA17_Chr1g0147051 32.468 308 163 8 5 279 295 590 8.62e-44 157
Msa0872240 MtrunA17_Chr2g0295531 30.061 326 182 8 6 299 232 543 1.28e-43 157
Msa0872240 MtrunA17_Chr3g0080391 32.667 300 165 7 6 279 269 557 2.71e-43 155
Msa0872240 MtrunA17_Chr7g0233801 29.836 305 173 7 6 279 242 536 3.99e-43 155
Msa0872240 MtrunA17_Chr1g0192311 31.373 306 167 8 6 278 257 552 4.38e-43 155
Msa0872240 MtrunA17_Chr1g0192281 31.373 306 167 8 6 278 257 552 4.38e-43 155
Msa0872240 MtrunA17_Chr1g0195331 32.716 324 168 11 10 300 247 553 4.93e-43 155
Msa0872240 MtrunA17_Chr4g0011791 33.663 303 157 9 6 279 205 492 1.13e-42 153
Msa0872240 MtrunA17_Chr4g0000121 31.373 306 167 8 6 278 244 539 1.66e-42 153
Msa0872240 MtrunA17_Chr2g0302021 30.820 305 171 5 6 280 215 509 2.07e-42 152
Msa0872240 MtrunA17_Chr8g0391311 32.459 305 165 7 6 279 230 524 2.59e-42 152
Msa0872240 MtrunA17_Chr3g0080381 33.119 311 163 7 1 278 312 610 4.62e-42 153
Msa0872240 MtrunA17_Chr5g0440871 31.494 308 162 8 6 290 39 320 5.61e-42 147
Msa0872240 MtrunA17_Chr8g0391291 31.475 305 168 7 6 279 228 522 5.95e-42 151
Msa0872240 MtrunA17_Chr8g0354901 31.457 302 172 6 6 282 276 567 6.42e-42 152
Msa0872240 MtrunA17_Chr8g0354911 33.798 287 148 5 6 261 300 575 7.22e-42 152
Msa0872240 MtrunA17_Chr2g0295851 30.921 304 167 8 6 288 55 336 1.36e-41 146
Msa0872240 MtrunA17_Chr1g0195351 32.407 324 167 12 10 300 247 551 1.92e-41 150
Msa0872240 MtrunA17_Chr1g0192301 31.494 308 164 9 6 278 262 557 2.14e-41 150
Msa0872240 MtrunA17_Chr1g0161731 32.343 303 165 6 6 282 48 336 5.25e-41 145
Msa0872240 MtrunA17_Chr7g0270691 33.882 304 162 7 5 279 239 532 5.42e-41 149
Msa0872240 MtrunA17_Chr7g0269531 30.395 329 176 9 5 298 251 561 5.91e-41 149
Msa0872240 MtrunA17_Chr7g0233831 30.877 285 158 6 6 261 243 517 7.36e-41 149
Msa0872240 MtrunA17_Chr8g0380581 30.435 322 179 9 8 299 67 373 8.87e-41 145
Msa0872240 MtrunA17_Chr7g0233771 30.392 306 171 8 6 279 242 537 1.51e-40 148
Msa0872240 MtrunA17_Chr8g0345211 31.935 310 168 8 8 288 276 571 5.36e-40 147
Msa0872240 MtrunA17_Chr2g0295541 27.324 355 181 8 8 299 252 592 7.62e-40 146
Msa0872240 MtrunA17_Chr4g0067601 28.173 323 188 7 8 299 260 569 3.30e-39 144
Msa0872240 MtrunA17_Chr2g0334111 29.126 309 172 6 5 286 25 313 4.87e-39 139
Msa0872240 MtrunA17_Chr6g0459781 38.798 183 94 4 3 177 10 182 8.93e-39 135
Msa0872240 MtrunA17_Chr7g0234711 34.742 213 108 4 98 279 40 252 1.62e-38 137
Msa0872240 MtrunA17_Chr5g0437831 29.773 309 177 7 8 286 75 373 1.96e-38 139
Msa0872240 MtrunA17_Chr4g0025841 33.061 245 128 4 6 232 37 263 2.66e-38 136
Msa0872240 MtrunA17_Chr4g0067611 27.523 327 189 7 6 299 258 569 3.10e-38 142
Msa0872240 MtrunA17_Chr1g0194081 30.233 301 172 6 8 280 257 547 3.24e-38 142
Msa0872240 MtrunA17_Chr8g0384121 29.114 316 178 4 1 279 241 547 6.24e-38 141
Msa0872240 MtrunA17_Chr1g0194091 30.982 326 177 10 8 299 255 566 9.43e-38 140
Msa0872240 MtrunA17_Chr7g0268241 29.721 323 175 10 6 300 50 348 1.28e-37 136
Msa0872240 MtrunA17_Chr1g0195311 33.574 277 139 9 53 300 52 312 1.54e-37 135
Msa0872240 MtrunA17_Chr4g0069891 29.276 304 174 6 6 279 285 577 1.33e-36 137
Msa0872240 MtrunA17_Chr2g0302001 34.513 226 119 3 83 279 195 420 2.01e-35 132
Msa0872240 MtrunA17_Chr3g0129921 28.852 305 172 4 12 279 251 547 1.07e-34 132
Msa0872240 MtrunA17_Chr7g0270651 28.115 313 183 5 8 288 261 563 4.02e-34 130
Msa0872240 MtrunA17_Chr7g0270631 28.435 313 182 6 8 288 249 551 1.89e-33 129
Msa0872240 MtrunA17_Chr7g0270631 26.667 315 183 5 8 284 797 1101 1.88e-30 121
Msa0872240 MtrunA17_Chr5g0440901 41.353 133 60 2 118 232 10 142 2.33e-31 114
Msa0872240 MtrunA17_Chr2g0301931 28.986 276 160 5 31 280 12 277 7.04e-31 117
Msa0872240 MtrunA17_Chr7g0270661 28.889 315 178 9 8 288 261 563 1.09e-30 120
Msa0872240 MtrunA17_Chr7g0270671 28.889 315 178 9 8 288 261 563 1.09e-30 120
Msa0872240 MtrunA17_Chr2g0314691 33.508 191 105 4 111 279 5 195 2.11e-29 111
Msa0872240 MtrunA17_Chr6g0460141 40.441 136 75 2 42 175 13 144 1.66e-27 104
Msa0872240 MtrunA17_Chr7g0265161 32.381 210 109 5 89 280 13 207 6.41e-27 105
Msa0872240 MtrunA17_Chr7g0271381 24.924 329 199 9 6 300 240 554 1.31e-24 103
Msa0872240 MtrunA17_Chr5g0440891 31.765 170 99 2 6 175 48 200 3.81e-20 86.7
Msa0872240 MtrunA17_Chr4g0073911 29.474 190 109 6 22 199 24 200 3.35e-17 79.3
Msa0872240 MtrunA17_Chr5g0440881 29.545 132 80 1 164 282 5 136 6.43e-14 68.2
Msa0872240 MtrunA17_Chr5g0437821 29.104 134 67 2 129 234 4 137 9.15e-14 67.4
Msa0872240 MtrunA17_Chr2g0299431 29.655 145 89 3 3 145 49 182 5.56e-13 68.2
Msa0872240 MtrunA17_Chr6g0459791 31.667 120 65 4 185 290 2 118 1.33e-12 63.5
Msa0872240 MtrunA17_Chr2g0314701 32.743 113 59 3 2 111 67 165 1.37e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0872240 AT3G29090.1 71.795 312 72 1 5 300 6 317 1.42e-172 480
Msa0872240 AT5G19730.1 43.289 298 144 5 4 280 83 376 5.89e-76 237
Msa0872240 AT2G36700.1 39.088 307 152 5 4 288 40 333 3.94e-66 210
Msa0872240 AT2G36710.1 38.387 310 153 6 4 288 89 385 3.79e-65 210
Msa0872240 AT5G47500.1 36.306 314 164 7 5 293 60 362 3.73e-63 203
Msa0872240 AT2G21610.2 35.548 301 159 6 5 288 55 337 8.45e-62 200
Msa0872240 AT2G21610.1 35.548 301 159 6 5 288 50 332 9.46e-62 199
Msa0872240 AT1G05310.1 36.393 305 156 4 6 282 91 385 2.55e-58 192
Msa0872240 AT5G07430.1 35.254 295 160 4 5 279 66 349 6.62e-58 190
Msa0872240 AT3G17060.1 35.048 311 164 7 6 291 46 343 2.03e-56 186
Msa0872240 AT5G07420.1 34.915 295 161 4 5 279 66 349 4.12e-56 185
Msa0872240 AT5G55590.1 37.162 296 161 5 5 279 81 372 4.92e-56 186
Msa0872240 AT5G61680.1 33.893 298 165 4 3 279 66 352 8.91e-56 184
Msa0872240 AT3G05620.1 36.519 293 156 4 8 280 243 525 1.82e-54 186
Msa0872240 AT1G69940.1 33.110 299 167 5 2 279 63 349 2.42e-54 181
Msa0872240 AT1G23200.1 36.455 299 155 7 6 280 251 538 1.42e-52 181
Msa0872240 AT5G07410.1 33.110 299 167 5 2 279 63 349 1.49e-52 176
Msa0872240 AT4G00190.1 34.211 304 161 6 6 280 165 458 5.62e-51 175
Msa0872240 AT3G06830.1 34.056 323 167 8 8 300 260 566 2.59e-50 175
Msa0872240 AT5G55590.2 37.500 256 135 5 5 239 81 332 9.88e-50 168
Msa0872240 AT5G49180.1 34.426 305 158 8 6 279 260 553 1.28e-49 173
Msa0872240 AT3G05610.1 33.784 296 158 5 6 274 256 540 2.10e-49 174
Msa0872240 AT4G03930.1 32.817 323 173 8 6 300 216 522 3.22e-48 168
Msa0872240 AT5G27870.1 31.399 293 164 3 6 271 253 535 4.52e-48 171
Msa0872240 AT1G11580.1 34.098 305 159 9 6 279 247 540 4.99e-48 169
Msa0872240 AT3G27980.1 32.198 323 175 8 6 300 189 495 5.02e-48 167
Msa0872240 AT1G11580.2 34.098 305 159 9 6 279 268 561 8.25e-48 168
Msa0872240 AT3G43270.1 34.437 302 158 5 8 279 217 508 2.92e-47 166
Msa0872240 AT4G33230.1 34.091 308 159 8 7 282 298 593 5.15e-47 167
Msa0872240 AT1G11590.1 31.889 323 176 7 6 300 216 522 1.07e-46 164
Msa0872240 AT3G14310.1 33.003 303 163 5 7 279 283 575 2.06e-46 165
Msa0872240 AT5G18990.1 31.270 307 168 6 3 280 26 318 7.20e-46 158
Msa0872240 AT3G24130.1 32.450 302 161 8 8 280 36 323 8.84e-46 158
Msa0872240 AT2G45220.1 33.993 303 153 8 8 279 209 495 2.10e-45 160
Msa0872240 AT5G04960.1 33.333 321 172 8 6 300 258 562 2.12e-45 162
Msa0872240 AT4G02330.1 30.945 307 170 7 5 279 258 554 2.59e-45 161
Msa0872240 AT1G53830.1 32.673 303 164 5 7 279 278 570 7.57e-45 160
Msa0872240 AT4G02320.1 31.173 324 177 6 6 299 208 515 1.35e-44 159
Msa0872240 AT2G47550.1 31.447 318 173 6 5 290 245 549 1.27e-43 157
Msa0872240 AT4G02300.1 32.459 305 166 4 6 280 222 516 2.06e-43 155
Msa0872240 AT2G47280.1 31.529 314 171 8 4 290 33 329 2.08e-43 151
Msa0872240 AT2G26450.1 31.429 315 168 9 7 289 303 601 2.14e-43 157
Msa0872240 AT3G47400.1 32.573 307 164 8 6 279 281 577 2.77e-43 156
Msa0872240 AT3G10710.1 33.667 300 164 6 6 280 256 545 3.47e-43 155
Msa0872240 AT5G26810.1 32.051 312 175 6 6 290 34 335 3.52e-43 151
Msa0872240 AT2G47030.1 31.353 303 171 5 8 281 279 573 4.86e-43 155
Msa0872240 AT2G47040.1 31.068 309 174 6 2 281 282 580 4.88e-43 155
Msa0872240 AT3G62170.1 32.237 304 167 6 8 281 279 573 5.95e-43 155
Msa0872240 AT5G51490.1 33.117 308 162 7 6 279 222 519 6.58e-43 154
Msa0872240 AT3G49220.1 33.007 306 162 8 6 279 285 579 6.69e-43 155
Msa0872240 AT4G15980.2 31.707 328 172 9 6 300 402 710 8.29e-43 156
Msa0872240 AT4G15980.1 31.707 328 172 9 6 300 392 700 9.23e-43 156
Msa0872240 AT3G49220.3 33.007 306 162 8 6 279 330 624 9.78e-43 155
Msa0872240 AT1G11370.1 32.937 252 132 4 6 230 46 287 1.64e-42 148
Msa0872240 AT3G10720.2 32.476 311 163 8 13 290 310 606 2.05e-42 154
Msa0872240 AT5G53370.1 31.699 306 166 7 6 279 274 568 2.43e-42 154
Msa0872240 AT1G02810.1 31.579 304 164 7 5 275 264 556 2.54e-42 153
Msa0872240 AT3G60730.1 32.831 332 172 11 2 300 204 517 2.92e-42 152
Msa0872240 AT5G53370.2 31.699 306 166 7 6 279 310 604 4.52e-42 153
Msa0872240 AT5G09760.1 30.671 313 172 4 6 282 241 544 5.17e-42 152
Msa0872240 AT5G09760.2 30.671 313 172 4 6 282 267 570 9.02e-42 152
Msa0872240 AT5G64640.1 32.278 316 166 6 6 282 289 595 1.00e-41 152
Msa0872240 AT5G04970.1 30.284 317 176 6 6 290 308 611 1.42e-41 152
Msa0872240 AT2G26440.1 31.803 305 165 5 6 279 238 530 6.10e-41 149
Msa0872240 AT5G51500.1 32.143 308 165 7 6 279 226 523 2.28e-40 147
Msa0872240 AT4G33220.2 30.719 306 172 6 4 279 90 385 3.14e-40 145
Msa0872240 AT2G43050.1 31.864 295 169 5 8 280 216 500 8.88e-40 145
Msa0872240 AT2G19150.1 31.511 311 179 6 6 295 41 338 8.94e-40 142
Msa0872240 AT3G10720.1 34.468 235 122 4 85 290 19 250 2.13e-39 139
Msa0872240 AT4G33220.1 30.719 306 172 6 4 279 211 506 2.55e-39 144
Msa0872240 AT3G59010.1 30.435 299 177 6 8 286 231 518 4.02e-39 144
Msa0872240 AT1G53840.1 29.667 300 175 7 6 279 281 570 3.85e-38 142
Msa0872240 AT5G20860.2 28.339 307 174 7 6 280 230 522 1.50e-35 134
Msa0872240 AT3G14300.1 29.900 301 174 7 6 279 661 951 1.66e-34 133
Msa0872240 AT2G19150.2 31.048 248 141 4 6 232 41 279 1.27e-30 117
Msa0872240 AT5G20860.1 26.224 286 139 5 6 261 230 473 1.04e-26 109
Msa0872240 AT1G44980.1 30.460 174 111 2 6 179 78 241 1.80e-21 91.3

Find 68 sgRNAs with CRISPR-Local

Find 150 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCCTGCAGGTTGGAATAAT+TGG 0.131021 6_1:-7651956 Msa0872240:CDS
GGTCTTTGCATTTACTTATA+TGG 0.186939 6_1:-7651991 Msa0872240:CDS
ATAGATAAATTATAGATTAT+TGG 0.200490 6_1:+7651386 None:intergenic
CATAATTTCTAAGCAGAATA+TGG 0.223122 6_1:+7651582 None:intergenic
CACAGGCAATGGGGACCTTT+TGG 0.233917 6_1:-7652020 Msa0872240:intron
GTGATAGGGAATGGGACTTT+TGG 0.298313 6_1:-7653269 Msa0872240:CDS
GTATTGACAGTGTCACAAAA+TGG 0.320111 6_1:-7653759 Msa0872240:CDS
GTCCCTCGAAACGGGTGAAA+TGG 0.336495 6_1:-7651710 Msa0872240:CDS
GACACACTTTATTTACATTC+TGG 0.338397 6_1:-7652536 Msa0872240:CDS
CATATCCACTGCAAGTCTGC+TGG 0.341379 6_1:-7652431 Msa0872240:CDS
TTTATAAATTACAGGTGTTT+CGG 0.349713 6_1:-7651744 Msa0872240:intron
TGGCAATAGCACTGCACTCT+TGG 0.360428 6_1:-7652462 Msa0872240:CDS
TTTACAATTGCAGGTTCCTT+GGG 0.365614 6_1:-7652658 Msa0872240:CDS
ATAGATAAATTATAGATTAT+CGG 0.374729 6_1:+7651414 None:intergenic
GCCTGCAGGTTGGAATAATT+GGG 0.378288 6_1:-7651955 Msa0872240:CDS
TTGCAGAGTTCTAAGGTGAT+AGG 0.379724 6_1:-7653284 Msa0872240:intron
TTAAGAGATTGTTATATTGA+AGG 0.418821 6_1:-7652503 Msa0872240:CDS
GTTGTTGTTGCAGAGTTCTA+AGG 0.419372 6_1:-7653291 Msa0872240:intron
AGCAGAATATGGAATCCTTA+TGG 0.423601 6_1:+7651593 None:intergenic
ACACACGTCGGACGATCATA+AGG 0.423759 6_1:-7653683 Msa0872240:CDS
TTCATAATGTTACTCATGCT+TGG 0.424047 6_1:+7651469 None:intergenic
AGTGGTTGCCGGTAGATTCC+CGG 0.425744 6_1:+7653654 None:intergenic
TTGCAGGTTCCTTGGGTGGC+AGG 0.427351 6_1:-7652651 Msa0872240:intron
TCCCTCGAAACGGGTGAAAT+GGG 0.435014 6_1:-7651709 Msa0872240:CDS
TTGCTACGTAAAGTGGTTGC+CGG 0.435259 6_1:+7653643 None:intergenic
TTAGTCTTTGCTACGTAAAG+TGG 0.442440 6_1:+7653636 None:intergenic
TCTGCTTAGAAATTATGTTA+AGG 0.443185 6_1:-7651576 Msa0872240:exon
GGCCCATTTCACCCGTTTCG+AGG 0.443339 6_1:+7651707 None:intergenic
TGGAAGTACGATTGTGGAAG+GGG 0.453802 6_1:-7653243 Msa0872240:CDS
TGTGACACTGTCAATACAAA+AGG 0.455866 6_1:+7653765 None:intergenic
TTCTTTATTCTTCAACACTC+TGG 0.457533 6_1:+7651686 None:intergenic
AAATTACAGGTGTTTCGGAC+CGG 0.462981 6_1:-7651739 Msa0872240:intron
CCCCAATTATTCCAACCTGC+AGG 0.464703 6_1:+7651954 None:intergenic
GATGTGCTATCACAGGCAAT+GGG 0.470835 6_1:-7652030 Msa0872240:intron
ACAGTGTCACAAAATGGAAC+AGG 0.476089 6_1:-7653753 Msa0872240:CDS
CATGTGAGAATAGTATCTTC+AGG 0.482520 6_1:+7653585 None:intergenic
ATATCCACTGCAAGTCTGCT+GGG 0.487721 6_1:-7652430 Msa0872240:CDS
GACGATCATAAGGATATCTC+CGG 0.489954 6_1:-7653673 Msa0872240:CDS
AGTTCTAAGGTGATAGGGAA+TGG 0.497376 6_1:-7653278 Msa0872240:CDS
AATTACAGGTGTTTCGGACC+GGG 0.506848 6_1:-7651738 Msa0872240:intron
ACCTTGGCTTGCTCAAAGAA+TGG 0.514250 6_1:-7651616 Msa0872240:CDS
GCCCATTTCACCCGTTTCGA+GGG 0.515455 6_1:+7651708 None:intergenic
TGCAGAGTTCTAAGGTGATA+GGG 0.520871 6_1:-7653283 Msa0872240:intron
TTGCTCAAAGAATGGCCATA+AGG 0.522742 6_1:-7651608 Msa0872240:CDS
GTTGAAGAATAAAGAAGCTG+AGG 0.523702 6_1:-7651679 Msa0872240:CDS
GGATATCTCCGGGAATCTAC+CGG 0.534564 6_1:-7653662 Msa0872240:CDS
ACAATTGCAGGTTCCTTGGG+TGG 0.537665 6_1:-7652655 Msa0872240:CDS
GTTCTAAGGTGATAGGGAAT+GGG 0.539964 6_1:-7653277 Msa0872240:CDS
GCAAAGACCACTCTTCCAAA+AGG 0.543612 6_1:+7652005 None:intergenic
TTGTTATATTGAAGGAAGTG+TGG 0.550354 6_1:-7652495 Msa0872240:CDS
TGTGGAAGTACGATTGTGGA+AGG 0.564913 6_1:-7653245 Msa0872240:CDS
GCCATTCTTTGAGCAAGCCA+AGG 0.565342 6_1:+7651615 None:intergenic
ATTACTATAAATGAGTACCT+TGG 0.566075 6_1:-7651347 Msa0872240:three_prime_UTR
GATCATTGTATAAAGCCTGC+AGG 0.567045 6_1:-7651969 Msa0872240:CDS
AAATCTCCACATGAAAAGAC+TGG 0.568295 6_1:-7652386 Msa0872240:CDS
GTGGAAGTACGATTGTGGAA+GGG 0.576938 6_1:-7653244 Msa0872240:CDS
ATTGTATAAAGCCTGCAGGT+TGG 0.579551 6_1:-7651965 Msa0872240:CDS
TGTTAAGGACACTTGAAACA+TGG 0.586212 6_1:-7651561 Msa0872240:three_prime_UTR
TGAACCCAGCAGACTTGCAG+TGG 0.598635 6_1:+7652426 None:intergenic
ACGATCATAAGGATATCTCC+GGG 0.609422 6_1:-7653672 Msa0872240:CDS
CTGAAGATACTATTCTCACA+TGG 0.629930 6_1:-7653584 Msa0872240:CDS
CCTGCAGGTTGGAATAATTG+GGG 0.636584 6_1:-7651954 Msa0872240:CDS
TGGTTGTGGAAGTACGATTG+TGG 0.644197 6_1:-7653249 Msa0872240:CDS
GTCCGACGTGTGTTTCTGAG+TGG 0.645729 6_1:+7653693 None:intergenic
GTAAAGTTACCTGCCACCCA+AGG 0.645790 6_1:+7652642 None:intergenic
GTGCTTGCTTCTATGAACAC+AGG 0.668340 6_1:-7651911 Msa0872240:intron
ATGTGCTATCACAGGCAATG+GGG 0.709383 6_1:-7652029 Msa0872240:intron
TGCCACTCAGAAACACACGT+CGG 0.821008 6_1:-7653695 Msa0872240:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTTTTTGATGTTTTTAT+TGG - chr6_1:7651836-7651855 Msa0872240:intron 10.0%
!!! TAATTTTGTTTATAAATTAC+AGG - chr6_1:7653421-7653440 Msa0872240:intron 10.0%
!! ATAGATAAATTATAGATTAT+CGG + chr6_1:7653762-7653781 None:intergenic 10.0%
!! ATAGATAAATTATAGATTAT+TGG + chr6_1:7653762-7653781 None:intergenic 10.0%
!! AAATTAAATTATTCATGTGT+TGG + chr6_1:7651755-7651774 None:intergenic 15.0%
!! AATCTACAATTATATATTCT+AGG - chr6_1:7653054-7653073 Msa0872240:intron 15.0%
!!! TTTTACATATAAAGTGTAAA+TGG - chr6_1:7653103-7653122 Msa0872240:intron 15.0%
!!! ATTAAAGCTTTTTAAGATTT+GGG + chr6_1:7653675-7653694 None:intergenic 15.0%
!!! TATTAAAGCTTTTTAAGATT+TGG + chr6_1:7653676-7653695 None:intergenic 15.0%
!! ACAACAAAAATTACAAGTAA+TGG - chr6_1:7651383-7651402 Msa0872240:three_prime_UTR 20.0%
!!! TTTGTGCAAAATTTTAAGTT+TGG - chr6_1:7652201-7652220 Msa0872240:intron 20.0%
!! TTAAGAGATTGTTATATTGA+AGG - chr6_1:7652670-7652689 Msa0872240:CDS 20.0%
!! ATTACATGTCTCTAAATATA+AGG - chr6_1:7653311-7653330 Msa0872240:intron 20.0%
!! CATTCAGTAATATTAATTAG+GGG + chr6_1:7653398-7653417 None:intergenic 20.0%
!! GCATTCAGTAATATTAATTA+GGG + chr6_1:7653399-7653418 None:intergenic 20.0%
!! TGCATTCAGTAATATTAATT+AGG + chr6_1:7653400-7653419 None:intergenic 20.0%
!! TTTATAAATTACAGGTGTTT+CGG - chr6_1:7653429-7653448 Msa0872240:intron 20.0%
!!! TAAGATTTGGGTTTTATTTT+AGG + chr6_1:7653663-7653682 None:intergenic 20.0%
!!! AAGAATTTCATCACTTTTGT+TGG - chr6_1:7651558-7651577 Msa0872240:three_prime_UTR 25.0%
!!! TTGATGGTGATCAATTTTAT+TGG + chr6_1:7651625-7651644 None:intergenic 25.0%
! AAATACATGAACTTACTTGA+TGG + chr6_1:7651641-7651660 None:intergenic 25.0%
!! GACATTTTCTCAAAAGATAA+AGG + chr6_1:7652037-7652056 None:intergenic 25.0%
! CTCAAAATCTTTGATATTGA+GGG - chr6_1:7652089-7652108 Msa0872240:intron 25.0%
!! AAAATTTTGCACAAAATCGA+TGG + chr6_1:7652196-7652215 None:intergenic 25.0%
! TATGGAGATACTACTTAATA+AGG + chr6_1:7652359-7652378 None:intergenic 25.0%
! AAAAATCTGCATAATGCTTA+TGG + chr6_1:7652377-7652396 None:intergenic 25.0%
! CATGAAAAATAAAGAAGGAA+AGG + chr6_1:7652442-7652461 None:intergenic 25.0%
!!! CTTTCCTTCTTTATTTTTCA+TGG - chr6_1:7652440-7652459 Msa0872240:CDS 25.0%
!! TTTTTCATTGTTTATGATGC+AGG - chr6_1:7652615-7652634 Msa0872240:intron 25.0%
! ACACTAAAAAAACATAGACA+CGG - chr6_1:7652867-7652886 Msa0872240:intron 25.0%
! TCATTGACACTTTAAATTGA+AGG + chr6_1:7653019-7653038 None:intergenic 25.0%
!! ATTATATATTCTAGGCCTTT+TGG - chr6_1:7653062-7653081 Msa0872240:intron 25.0%
! CTATAATGTAATGAACCAAA+AGG + chr6_1:7653080-7653099 None:intergenic 25.0%
!!! CTTTTGGTTCATTACATTAT+AGG - chr6_1:7653078-7653097 Msa0872240:intron 25.0%
! TATAAAGTGTAAATGGTTTG+TGG - chr6_1:7653110-7653129 Msa0872240:intron 25.0%
! CATAATTTCTAAGCAGAATA+TGG + chr6_1:7653594-7653613 None:intergenic 25.0%
! TCTGCTTAGAAATTATGTTA+AGG - chr6_1:7653597-7653616 Msa0872240:CDS 25.0%
CAAACTATGAAATGTGTGTA+CGG - chr6_1:7651692-7651711 Msa0872240:CDS 30.0%
!! TTTTGAGAATTTTTCTCCTG+AGG - chr6_1:7651978-7651997 Msa0872240:CDS 30.0%
TATATCATAGTGTGTTCTGA+TGG - chr6_1:7652001-7652020 Msa0872240:CDS 30.0%
! CCTCAATATCAAAGATTTTG+AGG + chr6_1:7652091-7652110 None:intergenic 30.0%
CCTCAAAATCTTTGATATTG+AGG - chr6_1:7652088-7652107 Msa0872240:intron 30.0%
!! TTGATTTGCAGTCAAAATTG+TGG - chr6_1:7652326-7652345 Msa0872240:intron 30.0%
!!! CTTCTTTATTTTTCATGGCA+GGG - chr6_1:7652445-7652464 Msa0872240:CDS 30.0%
CTCTTGATGTATTTGTTCAT+AGG - chr6_1:7652555-7652574 Msa0872240:intron 30.0%
TTTGTTCATAGGTTAGATGT+TGG - chr6_1:7652566-7652585 Msa0872240:intron 30.0%
GTTGGAACAAGAATTTGAAA+AGG - chr6_1:7652584-7652603 Msa0872240:intron 30.0%
! GACACACTTTATTTACATTC+TGG - chr6_1:7652637-7652656 Msa0872240:intron 30.0%
TTGTTATATTGAAGGAAGTG+TGG - chr6_1:7652678-7652697 Msa0872240:CDS 30.0%
!! AGACTGGTTATGTATTTTTG+AGG - chr6_1:7652803-7652822 Msa0872240:intron 30.0%
CACTAAAAAAACATAGACAC+GGG - chr6_1:7652868-7652887 Msa0872240:intron 30.0%
! CCATTTTCTCAAACTATTAC+TGG + chr6_1:7652921-7652940 None:intergenic 30.0%
CCAGTAATAGTTTGAGAAAA+TGG - chr6_1:7652918-7652937 Msa0872240:intron 30.0%
TGATATCCAACATGTATCAT+TGG + chr6_1:7652990-7653009 None:intergenic 30.0%
GGTCTTTGCATTTACTTATA+TGG - chr6_1:7653182-7653201 Msa0872240:intron 30.0%
TTCTTTATTCTTCAACACTC+TGG + chr6_1:7653490-7653509 None:intergenic 30.0%
TTCATAATGTTACTCATGCT+TGG + chr6_1:7653707-7653726 None:intergenic 30.0%
TGTGACACTGTCAATACAAA+AGG + chr6_1:7651411-7651430 None:intergenic 35.0%
! GTATTGACAGTGTCACAAAA+TGG - chr6_1:7651414-7651433 Msa0872240:three_prime_UTR 35.0%
! TTAGTCTTTGCTACGTAAAG+TGG + chr6_1:7651540-7651559 None:intergenic 35.0%
CATGTGAGAATAGTATCTTC+AGG + chr6_1:7651591-7651610 None:intergenic 35.0%
CTGAAGATACTATTCTCACA+TGG - chr6_1:7651589-7651608 Msa0872240:exon 35.0%
TTCATAGTTTGAAGAGTCGA+TGG + chr6_1:7651683-7651702 None:intergenic 35.0%
AACACACTATGATATACCTC+AGG + chr6_1:7651997-7652016 None:intergenic 35.0%
! CTGCATTTTCCACAATATCA+AGG + chr6_1:7652244-7652263 None:intergenic 35.0%
CCTGCCATGAAAAATAAAGA+AGG + chr6_1:7652447-7652466 None:intergenic 35.0%
!!! CCTTCTTTATTTTTCATGGC+AGG - chr6_1:7652444-7652463 Msa0872240:CDS 35.0%
! GATGTGCATTTTACAATTGC+AGG - chr6_1:7652506-7652525 Msa0872240:CDS 35.0%
! TTTTACAATTGCAGGTTCCT+TGG - chr6_1:7652514-7652533 Msa0872240:CDS 35.0%
TTTACAATTGCAGGTTCCTT+GGG - chr6_1:7652515-7652534 Msa0872240:CDS 35.0%
AAATCTCCACATGAAAAGAC+TGG - chr6_1:7652787-7652806 Msa0872240:intron 35.0%
! ACATAACCAGTCTTTTCATG+TGG + chr6_1:7652796-7652815 None:intergenic 35.0%
GTTGAAGAATAAAGAAGCTG+AGG - chr6_1:7653494-7653513 Msa0872240:intron 35.0%
AGCAGAATATGGAATCCTTA+TGG + chr6_1:7653583-7653602 None:intergenic 35.0%
TGTTAAGGACACTTGAAACA+TGG - chr6_1:7653612-7653631 Msa0872240:CDS 35.0%
ACAGTGTCACAAAATGGAAC+AGG - chr6_1:7651420-7651439 Msa0872240:three_prime_UTR 40.0%
GACGATCATAAGGATATCTC+CGG - chr6_1:7651500-7651519 Msa0872240:three_prime_UTR 40.0%
ACGATCATAAGGATATCTCC+GGG - chr6_1:7651501-7651520 Msa0872240:three_prime_UTR 40.0%
!! TTCATGTGTTGGTGTTGTGT+TGG + chr6_1:7651744-7651763 None:intergenic 40.0%
! GTTGTTGTTGCAGAGTTCTA+AGG - chr6_1:7651882-7651901 Msa0872240:intron 40.0%
!! TTGCAGAGTTCTAAGGTGAT+AGG - chr6_1:7651889-7651908 Msa0872240:intron 40.0%
!! TGCAGAGTTCTAAGGTGATA+GGG - chr6_1:7651890-7651909 Msa0872240:intron 40.0%
!! AGTTCTAAGGTGATAGGGAA+TGG - chr6_1:7651895-7651914 Msa0872240:intron 40.0%
!! GTTCTAAGGTGATAGGGAAT+GGG - chr6_1:7651896-7651915 Msa0872240:intron 40.0%
TTGAGAAAATGTCGCTGATG+CGG - chr6_1:7652044-7652063 Msa0872240:intron 40.0%
! TGATATTGAGGGTGCAATTG+TGG - chr6_1:7652100-7652119 Msa0872240:intron 40.0%
TGTCACGATCCTTGATATTG+TGG - chr6_1:7652232-7652251 Msa0872240:intron 40.0%
! TATTTTTCATGGCAGGGTTC+AGG - chr6_1:7652451-7652470 Msa0872240:CDS 40.0%
! ATTTTTCATGGCAGGGTTCA+GGG - chr6_1:7652452-7652471 Msa0872240:CDS 40.0%
!! GGAAGTGTGGACTTCATTTT+TGG - chr6_1:7652691-7652710 Msa0872240:CDS 40.0%
TGACCAAGTCTAGTGTCATA+TGG - chr6_1:7652830-7652849 Msa0872240:intron 40.0%
CAACCATATGACACTAGACT+TGG + chr6_1:7652836-7652855 None:intergenic 40.0%
TAGCACGACATATATGCATG+TGG + chr6_1:7652960-7652979 None:intergenic 40.0%
TGTCAGCCAATGATACATGT+TGG - chr6_1:7652981-7653000 Msa0872240:intron 40.0%
GATTACAGATGTGCTATCAC+AGG - chr6_1:7653136-7653155 Msa0872240:intron 40.0%
GATCATTGTATAAAGCCTGC+AGG - chr6_1:7653204-7653223 Msa0872240:CDS 40.0%
ATTGTATAAAGCCTGCAGGT+TGG - chr6_1:7653208-7653227 Msa0872240:CDS 40.0%
AAATTACAGGTGTTTCGGAC+CGG - chr6_1:7653434-7653453 Msa0872240:intron 40.0%
ATCCAGAACCACAAAAACCT+TGG - chr6_1:7653541-7653560 Msa0872240:intron 40.0%
TTGCTCAAAGAATGGCCATA+AGG - chr6_1:7653565-7653584 Msa0872240:CDS 40.0%
TTGCTACGTAAAGTGGTTGC+CGG + chr6_1:7651533-7651552 None:intergenic 45.0%
!! TGTTGTGTTGGTGTCACACA+CGG + chr6_1:7651732-7651751 None:intergenic 45.0%
TCACACATCAAACACGACAC+TGG + chr6_1:7651796-7651815 None:intergenic 45.0%
! GTGATAGGGAATGGGACTTT+TGG - chr6_1:7651904-7651923 Msa0872240:intron 45.0%
! TGGTTGTGGAAGTACGATTG+TGG - chr6_1:7651924-7651943 Msa0872240:CDS 45.0%
! TGTGGAAGTACGATTGTGGA+AGG - chr6_1:7651928-7651947 Msa0872240:CDS 45.0%
! GTGGAAGTACGATTGTGGAA+GGG - chr6_1:7651929-7651948 Msa0872240:CDS 45.0%
! TGGAAGTACGATTGTGGAAG+GGG - chr6_1:7651930-7651949 Msa0872240:CDS 45.0%
GACTGCAATTGAGGTTGTGT+CGG + chr6_1:7652277-7652296 None:intergenic 45.0%
CCACAATACGACTGCAATTG+AGG + chr6_1:7652286-7652305 None:intergenic 45.0%
CCTCAATTGCAGTCGTATTG+TGG - chr6_1:7652283-7652302 Msa0872240:intron 45.0%
TGCAGTCAAAATTGTGGTCG+CGG - chr6_1:7652332-7652351 Msa0872240:intron 45.0%
ATATCCACTGCAAGTCTGCT+GGG - chr6_1:7652743-7652762 Msa0872240:intron 45.0%
AGATGTGCTATCACAGGCAA+TGG - chr6_1:7653142-7653161 Msa0872240:intron 45.0%
GATGTGCTATCACAGGCAAT+GGG - chr6_1:7653143-7653162 Msa0872240:intron 45.0%
ATGTGCTATCACAGGCAATG+GGG - chr6_1:7653144-7653163 Msa0872240:intron 45.0%
GCAAAGACCACTCTTCCAAA+AGG + chr6_1:7653171-7653190 None:intergenic 45.0%
! AGCCTGCAGGTTGGAATAAT+TGG - chr6_1:7653217-7653236 Msa0872240:CDS 45.0%
! GCCTGCAGGTTGGAATAATT+GGG - chr6_1:7653218-7653237 Msa0872240:CDS 45.0%
! CCTGCAGGTTGGAATAATTG+GGG - chr6_1:7653219-7653238 Msa0872240:CDS 45.0%
GTGCTTGCTTCTATGAACAC+AGG - chr6_1:7653262-7653281 Msa0872240:CDS 45.0%
AATTACAGGTGTTTCGGACC+GGG - chr6_1:7653435-7653454 Msa0872240:intron 45.0%
! AGCCAAGGTTTTTGTGGTTC+TGG + chr6_1:7653546-7653565 None:intergenic 45.0%
! TGAGCAAGCCAAGGTTTTTG+TGG + chr6_1:7653552-7653571 None:intergenic 45.0%
!! ACCTTGGCTTGCTCAAAGAA+TGG - chr6_1:7653557-7653576 Msa0872240:CDS 45.0%
!!! ATTTATAACATTTTTTTAAT+AGG + chr6_1:7653337-7653356 None:intergenic 5.0%
TGCCACTCAGAAACACACGT+CGG - chr6_1:7651478-7651497 Msa0872240:three_prime_UTR 50.0%
ACACACGTCGGACGATCATA+AGG - chr6_1:7651490-7651509 Msa0872240:three_prime_UTR 50.0%
GGATATCTCCGGGAATCTAC+CGG - chr6_1:7651511-7651530 Msa0872240:three_prime_UTR 50.0%
!! GGGAATGGGACTTTTGGTTG+TGG - chr6_1:7651910-7651929 Msa0872240:intron 50.0%
! TGAGGGTGCAATTGTGGTTG+TGG - chr6_1:7652106-7652125 Msa0872240:intron 50.0%
ACAATTGCAGGTTCCTTGGG+TGG - chr6_1:7652518-7652537 Msa0872240:CDS 50.0%
GTAAAGTTACCTGCCACCCA+AGG + chr6_1:7652534-7652553 None:intergenic 50.0%
TGGCAATAGCACTGCACTCT+TGG - chr6_1:7652711-7652730 Msa0872240:intron 50.0%
CATATCCACTGCAAGTCTGC+TGG - chr6_1:7652742-7652761 Msa0872240:intron 50.0%
!! ATGGGGACCTTTTGGAAGAG+TGG - chr6_1:7653161-7653180 Msa0872240:intron 50.0%
CCCCAATTATTCCAACCTGC+AGG + chr6_1:7653222-7653241 None:intergenic 50.0%
CGTTTCGAGGGACAAAAACC+CGG + chr6_1:7653456-7653475 None:intergenic 50.0%
! CGGGTTTTTGTCCCTCGAAA+CGG - chr6_1:7653454-7653473 Msa0872240:intron 50.0%
! GGGTTTTTGTCCCTCGAAAC+GGG - chr6_1:7653455-7653474 Msa0872240:intron 50.0%
TCCCTCGAAACGGGTGAAAT+GGG - chr6_1:7653464-7653483 Msa0872240:intron 50.0%
GCCATTCTTTGAGCAAGCCA+AGG + chr6_1:7653561-7653580 None:intergenic 50.0%
! GTCCGACGTGTGTTTCTGAG+TGG + chr6_1:7651483-7651502 None:intergenic 55.0%
AGTGGTTGCCGGTAGATTCC+CGG + chr6_1:7651522-7651541 None:intergenic 55.0%
TGAACCCAGCAGACTTGCAG+TGG + chr6_1:7652750-7652769 None:intergenic 55.0%
! CACAGGCAATGGGGACCTTT+TGG - chr6_1:7653153-7653172 Msa0872240:intron 55.0%
GTCCCTCGAAACGGGTGAAA+TGG - chr6_1:7653463-7653482 Msa0872240:intron 55.0%
GCCCATTTCACCCGTTTCGA+GGG + chr6_1:7653468-7653487 None:intergenic 55.0%
TTGCAGGTTCCTTGGGTGGC+AGG - chr6_1:7652522-7652541 Msa0872240:CDS 60.0%
GGCCCATTTCACCCGTTTCG+AGG + chr6_1:7653469-7653488 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 7651347 7653848 7651347 ID=Msa0872240;Name=Msa0872240
chr6_1 mRNA 7651347 7653848 7651347 ID=Msa0872240-mRNA-1;Parent=Msa0872240;Name=Msa0872240-mRNA-1;_AED=0.11;_eAED=0.11;_QI=55|0.8|0.66|1|1|1|6|243|300
chr6_1 exon 7651347 7651752 7651347 ID=Msa0872240-mRNA-1:exon:2327;Parent=Msa0872240-mRNA-1
chr6_1 exon 7651912 7652037 7651912 ID=Msa0872240-mRNA-1:exon:2326;Parent=Msa0872240-mRNA-1
chr6_1 exon 7652371 7652558 7652371 ID=Msa0872240-mRNA-1:exon:2325;Parent=Msa0872240-mRNA-1
chr6_1 exon 7652652 7652729 7652652 ID=Msa0872240-mRNA-1:exon:2324;Parent=Msa0872240-mRNA-1
chr6_1 exon 7653196 7653300 7653196 ID=Msa0872240-mRNA-1:exon:2323;Parent=Msa0872240-mRNA-1
chr6_1 exon 7653551 7653848 7653551 ID=Msa0872240-mRNA-1:exon:2322;Parent=Msa0872240-mRNA-1
chr6_1 five_prime_UTR 7653794 7653848 7653794 ID=Msa0872240-mRNA-1:five_prime_utr;Parent=Msa0872240-mRNA-1
chr6_1 CDS 7653551 7653793 7653551 ID=Msa0872240-mRNA-1:cds;Parent=Msa0872240-mRNA-1
chr6_1 CDS 7653196 7653300 7653196 ID=Msa0872240-mRNA-1:cds;Parent=Msa0872240-mRNA-1
chr6_1 CDS 7652652 7652729 7652652 ID=Msa0872240-mRNA-1:cds;Parent=Msa0872240-mRNA-1
chr6_1 CDS 7652371 7652558 7652371 ID=Msa0872240-mRNA-1:cds;Parent=Msa0872240-mRNA-1
chr6_1 CDS 7651912 7652037 7651912 ID=Msa0872240-mRNA-1:cds;Parent=Msa0872240-mRNA-1
chr6_1 CDS 7651590 7651752 7651590 ID=Msa0872240-mRNA-1:cds;Parent=Msa0872240-mRNA-1
chr6_1 three_prime_UTR 7651347 7651589 7651347 ID=Msa0872240-mRNA-1:three_prime_utr;Parent=Msa0872240-mRNA-1
Gene Sequence

>Msa0872240

ATGGCACCTTTTGTATTGACAGTGTCACAAAATGGAACAGGAAACTACAGAACAGTACAAGAAGCTATTGATGCAGTGCCACTCAGAAACACACGTCGGACGATCATAAGGATATCTCCGGGAATCTACCGGCAACCACTTTACGTAGCAAAGACTAAGAATTTCATCACTTTTGTTGGTTTGTGTCCTGAAGATACTATTCTCACATGGAACAACACTGCCAATAAAATTGATCACCATCAAAGTTCTAAGGTGATAGGGAATGGGACTTTTGGTTGTGGAAGTACGATTGTGGAAGGGGAAGACTTTATTGCTGAGAATATTACTTTTGAGAATTTTTCTCCTGAGGGTTCAGGGCAAGCAGTAGCAGTTAGAGTAACAGCAGATAGATGTGCATTTTACAATTGCAGGTTCCTTGGGTGGCAGGACACACTTTATTTACATTCTGGCAAACAATATTTAAGAGATTGTTATATTGAAGGAAGTGTGGACTTCATTTTTGGCAATAGCACTGCACTCTTGGAACATTGTCATATCCACTGCAAGTCTGCTGGGTTCATAACTGCTCAGAGTAGAAAATCTCCACATGAAAAGACTGGTTATGTATTTTTGAGGCAATGGGGACCTTTTGGAAGAGTGGTCTTTGCATTTACTTATATGGATCATTGTATAAAGCCTGCAGGTTGGAATAATTGGGGAAAAGTTGAGAATGAAAAAAGTGCTTGCTTCTATGAACACAGGTGTTTCGGACCGGGTTTTTGTCCCTCGAAACGGGTGAAATGGGCCAGAGTGTTGAAGAATAAAGAAGCTGAGGAGTTTCTCATGCATAGTTTCATTGATCCAGAACCACAAAAACCTTGGCTTGCTCAAAGAATGGCCATAAGGATTCCATATTCTGCTTAG
Protein sequence

>Msa0872240

MAPFVLTVSQNGTGNYRTVQEAIDAVPLRNTRRTIIRISPGIYRQPLYVAKTKNFITFVGLCPEDTILTWNNTANKIDHHQSSKVIGNGTFGCGSTIVEGEDFIAENITFENFSPEGSGQAVAVRVTADRCAFYNCRFLGWQDTLYLHSGKQYLRDCYIEGSVDFIFGNSTALLEHCHIHCKSAGFITAQSRKSPHEKTGYVFLRQWGPFGRVVFAFTYMDHCIKPAGWNNWGKVENEKSACFYEHRCFGPGFCPSKRVKWARVLKNKEAEEFLMHSFIDPEPQKPWLAQRMAIRIPYSA*