AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0873100

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0873100 MtrunA17_Chr6g0454341 67.220 482 66 7 1 390 1 482 0.0 615
Msa0873100 MtrunA17_Chr6g0454321 66.525 472 66 7 1 380 1 472 0.0 593
Msa0873100 MtrunA17_Chr6g0454321 60.656 122 31 2 5 109 499 620 3.27e-38 145
Msa0873100 MtrunA17_Chr3g0078841 64.938 482 77 7 1 390 1 482 0.0 592
Msa0873100 MtrunA17_Chr8g0336331 63.825 481 83 8 1 390 1 481 0.0 578
Msa0873100 MtrunA17_Chr8g0359821 58.091 482 110 9 1 390 1 482 0.0 511
Msa0873100 MtrunA17_Chr6g0454191 57.938 485 109 8 1 390 1 485 1.17e-180 511
Msa0873100 MtrunA17_Chr6g0454351 57.906 468 118 10 1 389 1 468 1.39e-178 505
Msa0873100 MtrunA17_Chr6g0454291 57.411 479 110 6 4 388 1 479 9.56e-177 501
Msa0873100 MtrunA17_Chr6g0454301 56.667 480 116 9 1 388 254 733 2.93e-173 501
Msa0873100 MtrunA17_Chr6g0454301 71.101 218 50 1 180 384 11 228 8.44e-104 322
Msa0873100 MtrunA17_Chr5g0423981 57.906 449 128 6 1 389 1 448 2.58e-172 488
Msa0873100 MtrunA17_Chr7g0217881 58.065 465 119 7 1 389 1 465 2.09e-170 484
Msa0873100 MtrunA17_Chr8g0355011 59.146 328 97 4 99 390 40 366 1.07e-128 374
Msa0873100 MtrunA17_Chr3g0118691 41.226 473 186 5 6 386 11 483 3.72e-125 370
Msa0873100 MtrunA17_Chr3g0118701 40.710 479 191 6 6 392 11 488 1.72e-124 368
Msa0873100 MtrunA17_Chr6g0454201 63.946 294 72 3 110 390 213 485 4.39e-124 367
Msa0873100 MtrunA17_Chr6g0454201 67.337 199 47 3 1 181 1 199 2.58e-74 239
Msa0873100 MtrunA17_Chr6g0454221 83.663 202 20 1 196 384 28 229 3.75e-122 355
Msa0873100 MtrunA17_Chr6g0454331 75.446 224 42 1 180 390 260 483 1.80e-119 355
Msa0873100 MtrunA17_Chr6g0454331 59.694 196 60 2 5 181 2 197 2.72e-73 236
Msa0873100 MtrunA17_Chr6g0454401 80.676 207 27 1 196 389 278 484 2.75e-117 350
Msa0873100 MtrunA17_Chr6g0454401 63.819 199 54 2 1 181 1 199 4.83e-78 249
Msa0873100 MtrunA17_Chr6g0454141 75.676 222 41 1 182 390 263 484 2.76e-117 350
Msa0873100 MtrunA17_Chr6g0454141 60.606 198 61 2 1 181 1 198 6.92e-73 235
Msa0873100 MtrunA17_Chr6g0454181 64.419 267 79 2 140 390 218 484 4.08e-117 349
Msa0873100 MtrunA17_Chr6g0454181 65.152 198 52 2 1 181 1 198 2.24e-83 262
Msa0873100 MtrunA17_Chr6g0454121 74.324 222 44 1 182 390 262 483 3.85e-116 347
Msa0873100 MtrunA17_Chr6g0454121 60.101 198 61 3 1 181 1 197 4.57e-64 212
Msa0873100 MtrunA17_Chr6g0454361 74.439 223 44 1 180 389 262 484 5.08e-116 346
Msa0873100 MtrunA17_Chr6g0454361 65.829 199 50 3 1 181 1 199 5.44e-74 238
Msa0873100 MtrunA17_Chr6g0454261 74.324 222 44 1 182 390 263 484 5.41e-116 346
Msa0873100 MtrunA17_Chr6g0454261 60.101 198 62 2 1 181 1 198 1.59e-69 226
Msa0873100 MtrunA17_Chr6g0453951 77.295 207 34 1 196 389 324 530 1.73e-113 341
Msa0873100 MtrunA17_Chr6g0453951 62.814 199 56 3 1 181 47 245 2.67e-75 243
Msa0873100 MtrunA17_Chr6g0453961 73.094 223 47 1 180 389 271 493 2.22e-113 340
Msa0873100 MtrunA17_Chr6g0453961 60.302 199 61 3 1 181 10 208 5.36e-72 233
Msa0873100 MtrunA17_Chr6g0452771 68.254 252 64 2 154 389 232 483 4.03e-113 339
Msa0873100 MtrunA17_Chr6g0452771 61.111 198 60 2 1 181 1 198 1.27e-69 227
Msa0873100 MtrunA17_Chr6g0454271 68.696 230 59 1 174 390 62 291 4.31e-113 332
Msa0873100 MtrunA17_Chr6g0454151 73.543 223 46 1 180 389 259 481 4.83e-112 336
Msa0873100 MtrunA17_Chr6g0454151 60.714 196 60 2 1 179 1 196 6.24e-65 214
Msa0873100 MtrunA17_Chr6g0454171 52.888 329 86 3 114 389 1 313 2.15e-111 328
Msa0873100 MtrunA17_Chr6g0454131 71.300 223 51 1 182 391 262 484 8.01e-111 333
Msa0873100 MtrunA17_Chr6g0454131 58.586 198 64 3 1 181 1 197 7.79e-63 209
Msa0873100 MtrunA17_Chr6g0454211 58.305 295 89 3 109 390 498 771 4.77e-107 332
Msa0873100 MtrunA17_Chr6g0454211 63.918 194 53 2 5 181 292 485 2.83e-70 235
Msa0873100 MtrunA17_Chr6g0454211 53.922 204 25 3 182 385 133 267 1.23e-54 192
Msa0873100 MtrunA17_Chr6g0454211 55.882 68 30 0 114 181 1 68 6.28e-14 73.6
Msa0873100 MtrunA17_Chr8g0336271 76.289 194 33 1 1 181 1 194 3.30e-103 306
Msa0873100 MtrunA17_Chr6g0454231 74.872 195 35 1 1 181 241 435 9.74e-96 294
Msa0873100 MtrunA17_Chr6g0454231 55.856 222 72 4 166 386 23 219 1.74e-73 236
Msa0873100 MtrunA17_Chr6g0454371 74.713 174 31 1 229 389 1 174 7.04e-91 271
Msa0873100 MtrunA17_Chr5g0426401 60.680 206 66 3 196 387 108 312 2.33e-85 262
Msa0873100 MtrunA17_Chr5g0426431 60.870 207 66 3 196 388 275 480 3.11e-84 265
Msa0873100 MtrunA17_Chr5g0426431 54.054 185 72 2 10 181 12 196 1.08e-63 211
Msa0873100 MtrunA17_Chr6g0454281 63.077 195 55 2 1 178 1 195 8.23e-82 249
Msa0873100 MtrunA17_Chr3g0092641 58.252 206 71 3 196 387 275 479 1.10e-81 258
Msa0873100 MtrunA17_Chr3g0092641 51.075 186 78 2 9 181 11 196 1.18e-58 198
Msa0873100 MtrunA17_Chr3g0118721 56.098 205 76 1 196 386 86 290 6.96e-80 247
Msa0873100 MtrunA17_Chr3g0118771 55.924 211 78 2 196 392 285 494 1.26e-79 253
Msa0873100 MtrunA17_Chr3g0118771 42.553 188 96 1 6 181 17 204 5.49e-48 170
Msa0873100 MtrunA17_Chr6g0454251 62.371 194 56 2 5 181 2 195 2.34e-79 249
Msa0873100 MtrunA17_Chr6g0454251 68.382 136 30 1 182 304 260 395 7.14e-56 188
Msa0873100 MtrunA17_Chr3g0118711 55.610 205 77 1 196 386 277 481 6.47e-78 248
Msa0873100 MtrunA17_Chr3g0118711 42.408 191 98 1 3 181 6 196 1.63e-49 174
Msa0873100 MtrunA17_Chr3g0118671 53.659 205 81 1 196 386 270 474 4.92e-75 241
Msa0873100 MtrunA17_Chr3g0118671 43.085 188 95 1 6 181 2 189 3.48e-49 173
Msa0873100 MtrunA17_Chr2g0278711 56.311 206 74 2 198 387 273 478 7.77e-75 240
Msa0873100 MtrunA17_Chr2g0278711 52.910 189 72 2 5 180 6 190 1.60e-62 208
Msa0873100 MtrunA17_Chr8g0336261 76.642 137 19 1 229 352 1 137 1.17e-72 223
Msa0873100 MtrunA17_Chr4g0050341 54.271 199 77 1 198 382 289 487 1.61e-72 234
Msa0873100 MtrunA17_Chr4g0050341 44.681 188 90 2 8 181 17 204 1.58e-44 160
Msa0873100 MtrunA17_Chr3g0118751 55.330 197 72 3 196 392 270 450 9.07e-70 226
Msa0873100 MtrunA17_Chr3g0118751 43.617 188 94 1 6 181 2 189 1.66e-50 176
Msa0873100 MtrunA17_Chr3g0112771 30.735 449 227 10 12 386 14 452 7.82e-69 224
Msa0873100 MtrunA17_Chr7g0218841 31.746 441 226 12 9 382 5 437 8.27e-67 218
Msa0873100 MtrunA17_Chr7g0218831 30.909 440 230 13 9 382 5 436 9.02e-66 216
Msa0873100 MtrunA17_Chr3g0112761 32.450 453 216 12 12 386 10 450 1.05e-65 216
Msa0873100 MtrunA17_Chr3g0118661 52.709 203 83 1 196 385 277 479 5.47e-65 214
Msa0873100 MtrunA17_Chr3g0118661 42.553 188 96 1 6 181 9 196 9.05e-48 169
Msa0873100 MtrunA17_Chr7g0218811 29.955 444 230 11 9 382 14 446 9.26e-62 205
Msa0873100 MtrunA17_Chr4g0032331 29.571 443 226 9 12 377 10 443 6.49e-60 201
Msa0873100 MtrunA17_Chr7g0218791 29.670 455 233 14 1 382 1 441 1.17e-59 199
Msa0873100 MtrunA17_Chr7g0218821 28.668 443 240 12 9 378 4 443 5.92e-59 198
Msa0873100 MtrunA17_Chr1g0207931 28.337 427 234 10 10 385 92 497 1.16e-56 193
Msa0873100 MtrunA17_Chr6g0453941 43.945 289 99 11 6 261 7 265 4.17e-56 185
Msa0873100 MtrunA17_Chr5g0426411 50.581 172 70 3 1 157 1 172 7.64e-55 179
Msa0873100 MtrunA17_Chr5g0412111 41.379 203 106 2 195 385 260 461 2.47e-53 183
Msa0873100 MtrunA17_Chr5g0412131 43.000 200 101 2 198 385 271 469 8.91e-53 182
Msa0873100 MtrunA17_Chr5g0412131 27.473 182 116 5 9 180 11 186 2.73e-11 65.1
Msa0873100 MtrunA17_Chr8g0377921 29.684 475 225 15 9 386 2 464 2.66e-51 178
Msa0873100 MtrunA17_Chr6g0464881 26.840 462 250 13 6 389 7 458 1.22e-50 176
Msa0873100 MtrunA17_Chr5g0412101 42.564 195 99 3 203 385 277 470 2.08e-49 173
Msa0873100 MtrunA17_Chr5g0431441 29.322 457 235 13 10 386 18 466 2.28e-49 173
Msa0873100 MtrunA17_Chr6g0464841 27.692 455 241 14 6 382 7 451 5.27e-49 172
Msa0873100 MtrunA17_Chr8g0365811 28.480 467 235 14 12 385 497 957 2.42e-48 176
Msa0873100 MtrunA17_Chr8g0365811 35.981 214 111 4 198 385 262 475 2.34e-33 132
Msa0873100 MtrunA17_Chr1g0207951 28.665 457 246 14 5 385 118 570 5.46e-48 175
Msa0873100 MtrunA17_Chr1g0207951 41.117 197 103 3 202 385 912 1108 1.49e-42 159
Msa0873100 MtrunA17_Chr7g0275681 27.941 476 246 14 6 386 8 481 1.33e-47 169
Msa0873100 MtrunA17_Chr5g0393591 29.425 435 232 12 10 385 17 435 1.82e-47 167
Msa0873100 MtrunA17_Chr5g0427561 83.146 89 15 0 302 390 1 89 2.26e-47 156
Msa0873100 MtrunA17_Chr8g0380531 26.327 452 253 10 10 385 10 457 7.57e-47 166
Msa0873100 MtrunA17_Chr6g0464871 26.767 467 230 16 6 382 19 463 9.15e-47 166
Msa0873100 MtrunA17_Chr7g0250001 38.235 204 114 2 195 386 245 448 7.78e-46 163
Msa0873100 MtrunA17_Chr1g0173121 26.932 453 246 16 12 385 16 462 8.81e-46 163
Msa0873100 MtrunA17_Chr6g0464861 26.898 461 236 13 6 382 7 450 1.23e-45 163
Msa0873100 MtrunA17_Chr1g0207981 35.455 220 125 2 185 387 255 474 1.88e-45 163
Msa0873100 MtrunA17_Chr4g0044511 36.321 212 107 2 202 385 293 504 9.54e-43 156
Msa0873100 MtrunA17_Chr5g0401721 34.884 215 117 3 198 391 264 476 5.53e-42 153
Msa0873100 MtrunA17_Chr4g0053321 34.884 215 118 2 198 390 270 484 7.58e-42 153
Msa0873100 MtrunA17_Chr7g0249961 37.755 196 110 3 195 378 57 252 3.47e-41 146
Msa0873100 MtrunA17_Chr4g0053501 33.953 215 120 2 198 390 255 469 3.90e-41 151
Msa0873100 MtrunA17_Chr7g0232401 26.997 363 190 7 89 376 96 458 4.22e-41 151
Msa0873100 MtrunA17_Chr8g0377941 38.942 208 108 4 195 386 258 462 8.70e-41 150
Msa0873100 MtrunA17_Chr3g0098111 36.493 211 113 2 196 385 259 469 1.03e-40 150
Msa0873100 MtrunA17_Chr7g0265101 27.479 484 247 15 8 388 7 489 1.10e-40 150
Msa0873100 MtrunA17_Chr1g0159551 24.503 453 248 14 15 385 19 459 1.47e-40 149
Msa0873100 MtrunA17_Chr8g0339441 31.908 304 168 6 99 364 106 408 2.29e-40 148
Msa0873100 MtrunA17_Chr7g0249981 36.275 204 118 3 195 386 264 467 2.60e-40 149
Msa0873100 MtrunA17_Chr1g0207971 37.949 195 110 3 202 385 259 453 3.04e-40 148
Msa0873100 MtrunA17_Chr7g0249931 27.716 451 240 18 5 378 35 476 5.44e-40 148
Msa0873100 MtrunA17_Chr8g0382021 26.490 453 248 12 15 385 39 488 8.83e-40 147
Msa0873100 MtrunA17_Chr6g0462531 27.215 474 246 14 8 390 2 467 1.14e-39 147
Msa0873100 MtrunA17_Chr5g0414321 38.647 207 111 5 195 386 247 452 6.43e-39 145
Msa0873100 MtrunA17_Chr7g0232391 26.407 462 250 14 10 384 6 464 1.02e-38 144
Msa0873100 MtrunA17_Chr7g0243871 27.615 478 238 17 6 385 5 472 1.34e-38 144
Msa0873100 MtrunA17_Chr7g0265151 26.471 476 251 13 10 386 9 484 2.00e-38 144
Msa0873100 MtrunA17_Chr4g0066201 26.304 460 242 14 15 385 23 474 2.50e-38 144
Msa0873100 MtrunA17_Chr3g0121991 26.383 470 249 12 10 385 79 545 2.54e-38 144
Msa0873100 MtrunA17_Chr5g0432731 36.598 194 109 4 207 386 104 297 3.19e-38 139
Msa0873100 MtrunA17_Chr5g0414331 39.109 202 109 5 195 382 249 450 7.25e-38 142
Msa0873100 MtrunA17_Chr1g0179901 25.000 492 241 14 10 386 16 494 7.33e-38 142
Msa0873100 MtrunA17_Chr6g0462571 35.149 202 110 3 201 381 256 457 7.68e-38 142
Msa0873100 MtrunA17_Chr6g0462521 35.945 217 114 4 188 383 236 448 9.64e-38 141
Msa0873100 MtrunA17_Chr6g0449931 35.096 208 103 3 203 378 253 460 9.66e-38 142
Msa0873100 MtrunA17_Chr7g0218311 24.784 464 255 10 15 385 21 483 1.21e-37 142
Msa0873100 MtrunA17_Chr6g0464921 34.783 207 121 4 195 387 251 457 1.57e-37 141
Msa0873100 MtrunA17_Chr6g0464921 34.266 143 73 6 9 139 10 143 7.01e-13 69.7
Msa0873100 MtrunA17_Chr6g0453981 93.846 65 4 0 196 260 147 211 1.93e-37 135
Msa0873100 MtrunA17_Chr6g0453981 60.294 68 27 0 114 181 1 68 8.15e-21 90.5
Msa0873100 MtrunA17_Chr7g0232411 26.331 357 187 7 104 384 108 464 2.19e-37 140
Msa0873100 MtrunA17_Chr4g0066131 26.096 456 247 11 15 382 18 471 2.60e-37 140
Msa0873100 MtrunA17_Chr8g0336691 36.058 208 102 3 205 381 1168 1375 3.16e-37 144
Msa0873100 MtrunA17_Chr8g0336691 26.526 475 252 13 3 388 6 472 1.28e-36 142
Msa0873100 MtrunA17_Chr8g0336691 38.743 191 102 4 205 388 729 911 5.68e-35 137
Msa0873100 MtrunA17_Chr3g0106231 26.444 450 243 15 10 386 18 452 3.17e-37 140
Msa0873100 MtrunA17_Chr8g0336651 35.565 239 116 5 188 392 1013 1247 3.17e-37 144
Msa0873100 MtrunA17_Chr8g0336651 38.298 188 103 3 205 388 595 773 4.86e-36 140
Msa0873100 MtrunA17_Chr8g0336651 35.922 206 103 3 205 381 255 460 1.99e-35 138
Msa0873100 MtrunA17_Chr7g0243801 35.514 214 108 3 202 385 263 476 3.72e-37 140
Msa0873100 MtrunA17_Chr8g0339461 29.240 342 161 7 104 364 109 450 3.77e-37 140
Msa0873100 MtrunA17_Chr7g0265141 26.923 494 245 15 1 386 1 486 3.95e-37 140
Msa0873100 MtrunA17_Chr5g0420801 27.332 461 245 18 5 382 2 455 7.75e-37 139
Msa0873100 MtrunA17_Chr5g0440421 23.589 496 267 14 1 386 1 494 8.66e-37 139
Msa0873100 MtrunA17_Chr7g0235051 27.617 449 244 15 10 384 11 452 9.11e-37 139
Msa0873100 MtrunA17_Chr6g0462541 33.495 206 116 3 197 381 254 459 1.04e-36 139
Msa0873100 MtrunA17_Chr8g0336741 26.124 467 257 11 10 392 13 475 1.20e-36 139
Msa0873100 MtrunA17_Chr7g0243631 35.814 215 107 3 202 385 272 486 1.21e-36 139
Msa0873100 MtrunA17_Chr1g0207861 35.945 217 118 3 196 391 258 474 1.78e-36 138
Msa0873100 MtrunA17_Chr5g0448551 24.249 433 243 12 7 361 4 429 1.80e-36 138
Msa0873100 MtrunA17_Chr1g0207831 36.585 205 116 3 202 392 266 470 2.04e-36 138
Msa0873100 MtrunA17_Chr7g0243931 36.321 212 105 3 204 385 279 490 2.09e-36 139
Msa0873100 MtrunA17_Chr7g0275511 24.516 465 238 14 9 374 14 464 2.36e-36 138
Msa0873100 MtrunA17_Chr5g0419761 35.135 222 111 5 202 390 269 490 2.67e-36 138
Msa0873100 MtrunA17_Chr5g0431361 27.373 453 241 13 10 385 12 453 2.73e-36 137
Msa0873100 MtrunA17_Chr8g0336731 34.783 207 106 3 205 382 281 487 3.08e-36 138
Msa0873100 MtrunA17_Chr7g0243771 35.047 214 109 3 202 385 262 475 3.80e-36 137
Msa0873100 MtrunA17_Chr4g0072761 38.947 190 106 2 206 385 263 452 3.95e-36 137
Msa0873100 MtrunA17_Chr5g0419771 25.610 492 237 15 10 386 36 513 4.50e-36 138
Msa0873100 MtrunA17_Chr7g0265041 34.529 223 109 3 206 393 276 496 4.69e-36 137
Msa0873100 MtrunA17_Chr3g0122001 36.275 204 105 4 207 385 270 473 6.42e-36 139
Msa0873100 MtrunA17_Chr3g0122001 35.961 203 106 4 207 385 750 952 3.79e-35 137
Msa0873100 MtrunA17_Chr8g0373301 35.533 197 98 4 193 361 247 442 7.89e-36 136
Msa0873100 MtrunA17_Chr6g0462551 35.176 199 108 4 204 381 262 460 8.77e-36 136
Msa0873100 MtrunA17_Chr8g0366391 34.703 219 121 2 189 385 259 477 1.32e-35 136
Msa0873100 MtrunA17_Chr8g0335141 35.885 209 104 5 203 381 256 464 1.78e-35 135
Msa0873100 MtrunA17_Chr8g0339601 36.232 207 97 4 193 364 103 309 2.23e-35 132
Msa0873100 MtrunA17_Chr7g0232331 24.719 445 245 12 7 364 3 444 2.25e-35 135
Msa0873100 MtrunA17_Chr1g0207881 27.638 398 245 10 10 385 8 384 3.07e-35 133
Msa0873100 MtrunA17_Chr8g0347271 24.889 450 249 12 9 374 18 462 4.78e-35 134
Msa0873100 MtrunA17_Chr8g0334851 29.363 361 167 12 90 367 100 455 5.47e-35 134
Msa0873100 MtrunA17_Chr4g0066281 27.152 453 245 15 15 385 17 466 6.28e-35 134
Msa0873100 MtrunA17_Chr8g0347281 25.000 452 246 11 9 374 17 461 6.84e-35 134
Msa0873100 MtrunA17_Chr8g0339451 28.612 353 171 8 93 364 90 442 9.03e-35 133
Msa0873100 MtrunA17_Chr7g0243951 36.321 212 104 4 204 385 273 483 1.11e-34 134
Msa0873100 MtrunA17_Chr7g0243681 34.842 221 112 4 196 385 260 479 1.46e-34 133
Msa0873100 MtrunA17_Chr4g0060511 34.884 215 110 3 201 385 273 487 1.50e-34 133
Msa0873100 MtrunA17_Chr4g0066151 26.144 459 249 13 15 385 23 479 1.72e-34 133
Msa0873100 MtrunA17_Chr7g0265051 34.101 217 113 3 202 388 271 487 1.88e-34 133
Msa0873100 MtrunA17_Chr4g0044501 35.468 203 109 2 205 385 273 475 2.50e-34 132
Msa0873100 MtrunA17_Chr4g0014061 24.473 474 238 13 13 382 12 469 2.83e-34 132
Msa0873100 MtrunA17_Chr8g0339631 27.119 354 178 9 104 378 109 461 3.64e-34 132
Msa0873100 MtrunA17_Chr1g0153451 27.869 366 184 10 102 392 107 467 3.68e-34 132
Msa0873100 MtrunA17_Chr6g0486251 25.212 472 232 16 12 381 8 460 4.10e-34 132
Msa0873100 MtrunA17_Chr6g0486201 25.212 472 232 16 12 381 8 460 4.10e-34 132
Msa0873100 MtrunA17_Chr7g0232311 33.649 211 109 3 203 382 250 460 4.40e-34 131
Msa0873100 MtrunA17_Chr3g0106251 33.854 192 115 3 207 386 103 294 5.15e-34 128
Msa0873100 MtrunA17_Chr6g0459311 33.495 206 107 4 206 381 262 467 5.41e-34 131
Msa0873100 MtrunA17_Chr1g0161351 34.597 211 117 2 196 385 287 497 7.35e-34 131
Msa0873100 MtrunA17_Chr8g0335161 33.493 209 109 3 203 381 254 462 1.34e-33 130
Msa0873100 MtrunA17_Chr1g0153461 33.816 207 107 3 205 381 2 208 1.98e-33 124
Msa0873100 MtrunA17_Chr5g0428081 34.404 218 108 3 203 385 262 479 2.00e-33 130
Msa0873100 MtrunA17_Chr2g0294931 32.883 222 114 3 205 391 266 487 2.17e-33 130
Msa0873100 MtrunA17_Chr8g0369341 26.667 480 248 18 4 389 1 470 2.64e-33 129
Msa0873100 MtrunA17_Chr4g0066261 24.359 468 255 13 15 385 16 481 3.53e-33 129
Msa0873100 MtrunA17_Chr7g0241781 27.778 414 232 13 7 364 6 408 4.62e-33 128
Msa0873100 MtrunA17_Chr2g0294921 24.632 475 245 12 15 385 165 630 5.27e-33 130
Msa0873100 MtrunA17_Chr5g0442561 23.061 477 265 10 7 386 2 473 6.64e-33 128
Msa0873100 MtrunA17_Chr5g0416741 23.529 476 255 13 12 385 15 483 7.61e-33 129
Msa0873100 MtrunA17_Chr4g0072771 36.598 194 113 3 202 385 272 465 9.42e-33 128
Msa0873100 MtrunA17_Chr7g0243781 32.870 216 111 4 203 385 261 475 1.46e-32 127
Msa0873100 MtrunA17_Chr5g0410941 25.647 464 250 12 15 385 28 489 1.52e-32 127
Msa0873100 MtrunA17_Chr7g0243711 32.710 214 114 3 202 385 103 316 1.89e-32 124
Msa0873100 MtrunA17_Chr4g0066221 23.830 470 264 14 15 390 16 485 2.03e-32 127
Msa0873100 MtrunA17_Chr4g0066171 26.144 459 249 17 15 389 26 478 3.03e-32 127
Msa0873100 MtrunA17_Chr7g0232341 24.719 445 245 13 7 364 3 444 3.63e-32 126
Msa0873100 MtrunA17_Chr7g0243861 34.579 214 110 3 202 385 274 487 3.73e-32 127
Msa0873100 MtrunA17_Chr7g0243851 33.645 214 112 3 202 385 229 442 8.50e-32 125
Msa0873100 MtrunA17_Chr8g0374931 24.153 472 251 12 15 385 16 481 1.21e-31 125
Msa0873100 MtrunA17_Chr8g0374901 31.797 217 112 3 205 385 262 478 1.64e-31 125
Msa0873100 MtrunA17_Chr7g0241801 27.764 407 239 14 7 363 6 407 2.08e-31 124
Msa0873100 MtrunA17_Chr7g0243911 35.450 189 92 4 202 360 17 205 2.36e-31 119
Msa0873100 MtrunA17_Chr4g0011051 33.486 218 112 4 207 392 278 494 2.46e-31 124
Msa0873100 MtrunA17_Chr4g0044481 27.321 377 212 11 10 328 27 399 2.66e-31 123
Msa0873100 MtrunA17_Chr4g0044521 32.407 216 109 5 202 383 252 464 3.19e-31 124
Msa0873100 MtrunA17_Chr8g0374971 31.336 217 113 3 205 385 264 480 6.12e-31 123
Msa0873100 MtrunA17_Chr5g0442541 23.467 473 261 10 7 386 2 466 7.73e-31 122
Msa0873100 MtrunA17_Chr6g0463891 23.061 477 260 13 11 385 13 484 1.10e-30 122
Msa0873100 MtrunA17_Chr5g0431371 26.872 454 239 13 10 385 10 448 1.23e-30 122
Msa0873100 MtrunA17_Chr8g0374941 31.797 217 112 3 205 385 1201 1417 1.60e-30 124
Msa0873100 MtrunA17_Chr8g0374941 31.841 201 101 3 205 369 263 463 6.28e-29 119
Msa0873100 MtrunA17_Chr8g0374941 32.828 198 97 4 205 366 728 925 1.77e-28 117
Msa0873100 MtrunA17_Chr1g0165701 33.491 212 113 4 202 385 272 483 3.15e-30 121
Msa0873100 MtrunA17_Chr5g0403641 31.455 213 111 3 207 384 289 501 4.02e-30 121
Msa0873100 MtrunA17_Chr3g0079731 30.189 212 115 3 205 383 267 478 5.77e-30 120
Msa0873100 MtrunA17_Chr8g0370941 29.508 244 123 5 197 392 252 494 6.20e-30 120
Msa0873100 MtrunA17_Chr5g0401851 23.093 485 257 15 8 385 8 483 1.00e-29 120
Msa0873100 MtrunA17_Chr8g0350881 31.336 217 113 3 205 385 264 480 2.91e-29 118
Msa0873100 MtrunA17_Chr5g0431421 33.673 196 116 3 205 386 254 449 2.92e-29 118
Msa0873100 MtrunA17_Chr8g0334861 28.241 216 122 4 201 384 248 462 3.52e-29 118
Msa0873100 MtrunA17_Chr5g0442601 23.077 494 248 14 7 386 401 876 3.93e-29 119
Msa0873100 MtrunA17_Chr5g0442601 26.623 308 155 8 78 326 38 333 1.23e-22 100
Msa0873100 MtrunA17_Chr6g0463851 30.415 217 115 3 205 385 266 482 5.25e-29 117
Msa0873100 MtrunA17_Chr7g0243761 32.323 198 103 2 204 385 272 454 5.97e-29 117
Msa0873100 MtrunA17_Chr2g0307961 32.474 194 113 5 209 387 280 470 8.16e-29 117
Msa0873100 MtrunA17_Chr8g0361371 25.546 458 253 13 13 382 10 467 9.52e-29 117
Msa0873100 MtrunA17_Chr6g0454391 72.308 65 18 0 278 342 11 75 2.13e-28 107
Msa0873100 MtrunA17_Chr8g0355221 31.776 214 116 4 202 385 273 486 2.19e-28 116
Msa0873100 MtrunA17_Chr7g0265111 31.674 221 120 3 197 386 296 516 4.09e-28 115
Msa0873100 MtrunA17_Chr5g0429711 32.821 195 115 4 207 385 267 461 4.28e-28 115
Msa0873100 MtrunA17_Chr5g0442581 29.386 228 124 4 202 393 258 484 7.57e-28 115
Msa0873100 MtrunA17_Chr5g0448521 29.167 264 145 5 159 386 211 468 9.21e-28 114
Msa0873100 MtrunA17_Chr5g0431401 31.795 195 119 3 205 385 254 448 1.48e-27 113
Msa0873100 MtrunA17_Chr2g0294941 32.487 197 98 3 205 366 164 360 1.86e-27 112
Msa0873100 MtrunA17_Chr5g0431431 29.944 354 226 9 10 351 10 353 4.98e-27 110
Msa0873100 MtrunA17_Chr7g0243611 38.095 147 75 2 202 332 131 277 6.55e-27 108
Msa0873100 MtrunA17_Chr2g0329111 30.928 194 106 4 206 371 266 459 1.66e-26 110
Msa0873100 MtrunA17_Chr5g0442491 23.237 482 260 13 7 386 2 475 2.26e-26 110
Msa0873100 MtrunA17_Chr6g0463861 29.032 217 118 4 205 385 257 473 3.47e-26 109
Msa0873100 MtrunA17_Chr8g0361411 33.838 198 113 5 205 385 257 453 3.58e-26 109
Msa0873100 MtrunA17_Chr5g0416821 23.922 464 257 15 12 385 16 473 6.23e-26 108
Msa0873100 MtrunA17_Chr5g0442521 21.130 478 268 10 7 382 2 472 8.56e-26 108
Msa0873100 MtrunA17_Chr2g0302991 31.401 207 115 3 206 385 256 462 1.24e-25 107
Msa0873100 MtrunA17_Chr5g0409591 33.333 180 86 5 197 347 267 441 3.09e-25 107
Msa0873100 MtrunA17_Chr4g0042891 31.068 206 110 4 206 384 264 464 5.95e-25 105
Msa0873100 MtrunA17_Chr8g0334831 31.343 201 94 5 205 361 253 453 6.62e-25 105
Msa0873100 MtrunA17_Chr5g0442511 22.149 456 270 11 7 385 46 493 6.78e-25 106
Msa0873100 MtrunA17_Chr8g0367221 23.235 439 247 12 10 363 12 445 2.02e-24 105
Msa0873100 MtrunA17_Chr8g0367221 29.114 237 138 8 159 369 1006 1238 8.21e-20 92.0
Msa0873100 MtrunA17_Chr8g0367221 27.511 229 140 6 159 363 1496 1722 8.04e-19 89.0
Msa0873100 MtrunA17_Chr3g0079711 28.804 184 98 4 233 383 3 186 7.56e-24 97.8
Msa0873100 MtrunA17_Chr4g0042931 30.622 209 116 4 202 384 257 462 9.60e-24 102
Msa0873100 MtrunA17_Chr7g0243811 36.842 133 68 1 203 319 236 368 2.64e-23 100
Msa0873100 MtrunA17_Chr5g0429681 31.818 198 112 6 207 382 300 496 5.42e-23 100
Msa0873100 MtrunA17_Chr8g0337381 39.535 129 68 3 264 388 2 124 6.33e-23 93.6
Msa0873100 MtrunA17_Chr2g0302961 30.583 206 116 3 207 385 260 465 1.28e-22 99.4
Msa0873100 MtrunA17_Chr8g0336251 33.333 174 98 3 204 359 266 439 1.67e-22 99.0
Msa0873100 MtrunA17_Chr8g0336321 33.908 174 97 4 204 359 266 439 1.99e-22 98.6
Msa0873100 MtrunA17_Chr5g0427571 33.333 174 98 4 204 359 100 273 3.17e-22 95.9
Msa0873100 MtrunA17_Chr7g0231631 30.000 210 121 5 196 385 56 259 5.68e-22 94.7
Msa0873100 MtrunA17_Chr6g0454111 64.286 70 25 0 180 249 114 183 9.73e-22 91.7
Msa0873100 MtrunA17_Chr3g0092031 32.370 173 97 5 209 363 6 176 5.39e-21 90.1
Msa0873100 MtrunA17_Chr2g0278721 33.721 172 94 4 209 362 785 954 6.17e-21 95.1
Msa0873100 MtrunA17_Chr2g0278721 31.214 173 99 5 209 363 274 444 1.14e-16 82.0
Msa0873100 MtrunA17_Chr6g0482061 29.612 206 113 4 206 384 278 478 1.31e-20 93.6
Msa0873100 MtrunA17_Chr3g0118741 60.345 58 23 0 6 63 2 59 2.64e-20 84.3
Msa0873100 MtrunA17_Chr8g0357361 33.824 136 78 1 205 328 116 251 1.12e-19 88.2
Msa0873100 MtrunA17_Chr4g0069611 32.948 173 96 5 209 363 269 439 1.68e-19 90.1
Msa0873100 MtrunA17_Chr2g0302851 24.083 436 249 16 5 363 10 440 3.85e-19 89.0
Msa0873100 MtrunA17_Chr6g0454381 57.353 68 29 0 114 181 1 68 3.90e-19 83.2
Msa0873100 MtrunA17_Chr6g0466831 32.184 174 98 5 209 364 272 443 2.64e-18 86.3
Msa0873100 MtrunA17_Chr4g0040691 26.180 233 151 4 178 390 231 462 1.42e-17 84.3
Msa0873100 MtrunA17_Chr6g0466841 31.250 176 97 6 209 364 272 443 1.94e-17 84.0
Msa0873100 MtrunA17_Chr4g0066141 23.760 383 232 14 31 385 1 351 3.53e-17 82.4
Msa0873100 MtrunA17_Chr4g0039881 29.651 172 103 4 209 363 246 416 3.41e-16 80.1
Msa0873100 MtrunA17_Chr6g0454241 73.171 41 11 0 345 385 1 41 5.06e-15 69.7
Msa0873100 MtrunA17_Chr6g0464091 30.460 174 101 5 208 363 278 449 9.35e-15 75.5
Msa0873100 MtrunA17_Chr4g0029131 20.674 445 257 14 6 366 8 440 1.14e-14 75.9
Msa0873100 MtrunA17_Chr2g0278741 30.058 173 101 5 209 363 356 526 1.25e-14 75.5
Msa0873100 MtrunA17_Chr4g0040711 28.743 167 103 2 178 329 231 396 1.68e-14 74.7
Msa0873100 MtrunA17_Chr7g0243731 41.538 65 38 0 264 328 9 73 7.43e-14 66.6
Msa0873100 MtrunA17_Chr3g0118731 34.259 108 59 1 62 157 28 135 7.73e-14 68.9
Msa0873100 MtrunA17_Chr7g0267931 71.053 38 10 1 14 50 24 61 1.01e-13 65.5
Msa0873100 MtrunA17_Chr1g0196851 25.405 185 112 5 208 366 296 480 4.80e-13 70.5
Msa0873100 MtrunA17_Chr2g0283041 23.267 202 135 4 147 331 197 395 2.25e-12 68.2
Msa0873100 MtrunA17_Chr2g0319791 25.789 190 118 4 207 373 257 446 4.04e-12 67.4
Msa0873100 MtrunA17_Chr4g0029151 24.742 291 179 10 103 366 171 448 4.31e-12 67.4
Msa0873100 MtrunA17_Chr2g0319761 25.773 194 121 4 203 373 253 446 6.37e-12 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0873100 AT1G22380.1 56.731 208 76 2 196 389 277 484 1.97e-80 255
Msa0873100 AT1G22380.1 49.198 187 83 2 7 181 10 196 2.42e-56 192
Msa0873100 AT1G22370.1 57.692 208 74 2 196 389 102 309 9.46e-80 248
Msa0873100 AT1G22360.1 55.046 218 83 3 187 389 264 481 2.67e-79 252
Msa0873100 AT1G22360.1 54.404 193 76 1 1 181 1 193 3.62e-67 221
Msa0873100 AT1G22400.1 55.288 208 79 2 196 389 278 485 4.54e-79 252
Msa0873100 AT1G22400.1 51.852 189 78 2 6 181 9 197 8.00e-61 204
Msa0873100 AT1G22340.1 55.288 208 78 2 196 388 277 484 2.03e-78 250
Msa0873100 AT1G22340.1 52.941 187 76 1 7 181 10 196 3.22e-65 216
Msa0873100 AT1G22370.2 57.692 208 74 2 196 389 272 479 1.61e-77 248
Msa0873100 AT1G22370.2 52.660 188 72 2 5 180 8 190 1.77e-61 206
Msa0873100 AT1G22360.2 53.211 218 75 4 187 389 264 469 4.06e-72 233
Msa0873100 AT1G22360.2 54.404 193 76 1 1 181 1 193 4.02e-67 220
Msa0873100 AT1G78270.1 51.942 206 84 2 196 386 276 481 2.96e-71 231
Msa0873100 AT1G78270.1 50.000 206 85 3 2 190 5 209 1.99e-62 208
Msa0873100 AT5G59590.1 31.333 450 225 9 7 382 7 446 2.29e-69 225
Msa0873100 AT5G59580.1 31.929 451 218 12 8 382 7 444 3.48e-68 223
Msa0873100 AT3G46690.1 32.009 453 221 11 7 383 6 447 1.16e-63 211
Msa0873100 AT3G46670.1 30.425 447 223 11 12 382 11 445 2.04e-63 210
Msa0873100 AT3G11340.1 28.825 451 237 7 8 386 7 445 4.55e-63 209
Msa0873100 AT5G05900.1 30.067 449 230 11 11 385 9 447 2.32e-62 207
Msa0873100 AT3G46700.1 30.357 448 232 9 8 385 7 444 1.06e-61 205
Msa0873100 AT3G46680.1 30.110 455 223 11 8 382 7 446 1.22e-61 205
Msa0873100 AT3G46720.1 29.978 447 227 9 7 382 6 437 2.13e-61 204
Msa0873100 AT5G05860.1 30.000 450 234 10 10 387 9 449 4.24e-59 199
Msa0873100 AT5G38040.1 28.539 438 231 10 19 383 19 447 2.55e-58 196
Msa0873100 AT5G38010.1 28.850 461 240 13 1 383 1 451 3.75e-58 196
Msa0873100 AT3G46650.1 27.700 426 249 8 8 380 8 427 4.51e-57 193
Msa0873100 AT3G02100.1 28.976 459 246 17 1 382 1 456 3.02e-55 189
Msa0873100 AT2G36970.1 25.667 487 256 11 1 393 1 475 7.82e-53 183
Msa0873100 AT2G26480.1 26.432 454 252 9 7 388 5 448 1.19e-52 182
Msa0873100 AT3G55700.1 29.176 449 237 12 12 386 10 451 2.04e-52 181
Msa0873100 AT2G31750.1 28.571 462 235 15 8 386 6 455 9.10e-52 179
Msa0873100 AT2G31750.2 28.571 462 235 15 8 386 6 455 1.39e-51 180
Msa0873100 AT2G36790.1 30.658 486 218 14 10 386 13 488 2.34e-50 177
Msa0873100 AT2G31790.1 30.702 456 229 15 7 382 5 453 1.92e-49 173
Msa0873100 AT2G43840.1 27.753 454 242 14 10 388 7 449 4.53e-49 172
Msa0873100 AT2G43840.2 27.753 454 242 14 10 388 7 449 4.88e-49 172
Msa0873100 AT4G15480.1 28.145 469 235 12 10 385 19 478 4.94e-49 173
Msa0873100 AT3G55710.1 27.617 449 248 10 12 386 10 455 4.58e-48 170
Msa0873100 AT1G05680.1 42.718 206 100 5 195 386 248 449 5.56e-47 167
Msa0873100 AT2G15480.1 26.875 480 256 12 1 385 1 480 1.06e-46 167
Msa0873100 AT1G05675.1 41.584 202 104 4 195 382 248 449 1.49e-46 166
Msa0873100 AT3G46660.1 36.318 201 113 1 197 382 252 452 4.56e-46 164
Msa0873100 AT3G46660.1 35.915 142 66 6 12 139 16 146 3.15e-15 77.4
Msa0873100 AT5G05880.1 36.634 202 113 1 196 382 244 445 5.74e-46 164
Msa0873100 AT2G36800.1 28.279 488 228 16 10 386 12 488 6.70e-46 165
Msa0873100 AT4G14090.1 27.815 453 252 14 3 384 6 454 6.72e-46 164
Msa0873100 AT2G15480.2 26.939 490 253 13 1 385 1 490 9.83e-46 164
Msa0873100 AT2G15490.3 27.813 471 245 12 10 385 7 477 1.07e-45 164
Msa0873100 AT2G23260.1 29.605 456 251 12 1 387 1 455 1.63e-45 163
Msa0873100 AT2G43820.1 27.074 458 248 16 6 388 3 449 4.76e-45 161
Msa0873100 AT2G15490.1 27.637 474 245 13 10 385 7 480 7.33e-45 162
Msa0873100 AT2G36760.1 26.294 483 243 14 10 386 14 489 8.88e-45 162
Msa0873100 AT4G01070.1 27.468 466 242 12 6 381 4 463 2.53e-44 160
Msa0873100 AT2G36770.1 25.577 477 254 12 10 386 14 489 3.07e-44 160
Msa0873100 AT2G23250.1 28.935 432 241 10 18 385 6 435 8.50e-44 158
Msa0873100 AT5G05870.1 37.561 205 113 1 196 385 250 454 1.96e-43 157
Msa0873100 AT1G05560.1 27.742 465 250 14 9 393 4 462 3.67e-43 157
Msa0873100 AT1G05560.2 27.312 465 252 13 9 393 54 512 6.05e-43 157
Msa0873100 AT2G30140.2 26.786 448 254 12 6 385 9 450 1.34e-42 155
Msa0873100 AT5G05890.1 36.139 202 114 1 196 382 248 449 4.38e-42 154
Msa0873100 AT5G05890.1 34.815 135 62 4 10 127 8 133 7.08e-11 63.9
Msa0873100 AT2G30150.2 26.154 455 242 11 10 385 13 452 1.00e-41 152
Msa0873100 AT1G01420.2 27.957 465 234 13 9 381 10 465 1.10e-41 153
Msa0873100 AT1G01420.1 27.957 465 234 13 9 381 7 462 1.42e-41 152
Msa0873100 AT3G21560.1 35.749 207 112 3 198 385 268 472 1.46e-40 150
Msa0873100 AT3G21560.1 32.317 164 83 6 9 150 11 168 2.65e-11 65.5
Msa0873100 AT2G30150.1 26.000 450 239 11 15 385 2 436 2.48e-40 149
Msa0873100 AT4G34131.1 25.104 482 259 13 1 384 1 478 6.97e-40 148
Msa0873100 AT1G05530.1 27.155 464 242 17 8 386 3 455 8.44e-40 147
Msa0873100 AT2G36750.1 26.458 480 245 15 10 386 10 484 2.03e-39 147
Msa0873100 AT5G14860.1 26.793 474 243 14 10 385 8 475 1.13e-38 145
Msa0873100 AT2G28080.1 37.736 212 111 5 197 391 270 477 1.23e-38 145
Msa0873100 AT2G30140.1 26.711 453 249 15 6 385 9 451 1.59e-38 144
Msa0873100 AT4G15490.1 34.975 203 115 2 204 389 268 470 2.06e-38 144
Msa0873100 AT4G15490.1 30.065 153 91 4 6 144 4 154 5.67e-12 67.4
Msa0873100 AT2G16890.2 27.719 469 236 16 10 385 9 467 3.01e-38 144
Msa0873100 AT4G15500.1 34.466 206 118 2 198 386 258 463 3.16e-38 143
Msa0873100 AT5G17040.2 36.649 191 111 3 206 386 148 338 6.26e-38 140
Msa0873100 AT1G10400.1 27.233 459 250 15 8 384 5 461 1.03e-37 142
Msa0873100 AT5G17040.1 36.649 191 111 3 206 386 250 440 1.97e-37 140
Msa0873100 AT5G17050.1 26.258 457 254 14 6 386 8 457 4.81e-37 140
Msa0873100 AT5G66690.1 25.053 475 245 12 8 384 5 466 2.68e-36 138
Msa0873100 AT5G17030.1 34.500 200 121 3 197 386 257 456 3.23e-36 137
Msa0873100 AT4G36770.1 36.979 192 90 3 206 366 253 444 3.34e-36 137
Msa0873100 AT5G26310.1 33.180 217 110 4 203 384 250 466 5.47e-36 137
Msa0873100 AT5G03490.1 26.164 451 257 14 6 384 15 461 8.29e-36 137
Msa0873100 AT3G53160.1 36.620 213 104 4 205 386 271 483 1.08e-35 137
Msa0873100 AT3G53150.1 32.911 237 117 3 198 392 280 516 3.59e-35 135
Msa0873100 AT1G24100.1 35.437 206 118 4 195 385 253 458 5.27e-35 134
Msa0873100 AT4G34135.1 25.738 474 257 10 6 384 7 480 1.38e-34 134
Msa0873100 AT2G36780.1 32.883 222 118 3 196 386 268 489 1.58e-34 134
Msa0873100 AT4G34138.1 25.259 483 247 17 8 387 9 480 1.59e-34 133
Msa0873100 AT1G73880.1 35.323 201 109 3 205 386 269 467 4.46e-34 132
Msa0873100 AT4G15550.1 34.762 210 103 4 205 384 267 472 1.82e-33 130
Msa0873100 AT3G50740.1 32.883 222 109 7 201 384 253 472 2.21e-33 130
Msa0873100 AT1G30530.1 25.167 449 261 13 7 386 9 451 4.10e-33 129
Msa0873100 AT2G18560.1 34.804 204 99 5 207 378 168 369 6.30e-33 127
Msa0873100 AT2G18570.1 25.424 472 236 18 8 378 3 459 1.16e-31 125
Msa0873100 AT3G16520.3 33.831 201 107 4 206 383 260 457 1.49e-31 125
Msa0873100 AT3G16520.2 35.714 182 91 4 206 364 260 438 5.50e-31 123
Msa0873100 AT3G16520.1 35.714 182 91 4 206 364 260 438 6.71e-31 123
Msa0873100 AT1G01390.1 37.220 223 105 6 197 388 248 466 2.04e-30 122
Msa0873100 AT1G01390.2 37.220 223 105 6 197 388 265 483 2.50e-30 122
Msa0873100 AT2G29730.1 31.100 209 123 4 197 386 257 463 5.30e-30 120
Msa0873100 AT5G37950.2 26.934 349 173 10 25 303 1 337 3.39e-29 116
Msa0873100 AT2G29710.1 30.693 202 119 4 205 386 263 463 5.74e-29 117
Msa0873100 AT1G51210.1 26.492 419 238 17 8 360 18 432 6.86e-29 117
Msa0873100 AT3G22250.1 34.078 179 100 5 197 358 264 441 8.72e-29 117
Msa0873100 AT2G16890.3 26.291 426 212 15 10 343 9 424 4.01e-28 115
Msa0873100 AT3G21790.1 23.679 473 262 13 12 385 6 478 4.22e-28 115
Msa0873100 AT3G21750.1 24.786 468 263 13 8 386 2 469 5.82e-26 109
Msa0873100 AT1G07260.1 30.986 213 121 5 198 386 262 472 9.53e-26 108
Msa0873100 AT5G37950.1 26.257 358 170 13 25 303 1 343 2.57e-25 105
Msa0873100 AT4G15280.1 30.472 233 127 4 188 386 243 474 2.97e-25 107
Msa0873100 AT4G15280.2 30.472 233 127 4 188 386 275 506 3.19e-25 107
Msa0873100 AT5G12890.1 24.696 494 258 21 1 389 1 485 5.97e-25 106
Msa0873100 AT1G07240.1 29.665 209 118 3 205 386 270 476 1.66e-24 105
Msa0873100 AT3G21760.1 23.319 476 262 14 12 385 6 480 2.31e-24 104
Msa0873100 AT2G29740.1 30.583 206 114 4 202 382 270 471 2.40e-24 104
Msa0873100 AT1G06000.1 25.057 439 273 15 1 387 1 435 7.77e-24 102
Msa0873100 AT5G65550.1 29.536 237 147 4 152 369 211 446 1.01e-23 102
Msa0873100 AT4G15260.1 30.508 236 124 5 188 386 123 355 1.05e-23 101
Msa0873100 AT1G07250.1 30.244 205 118 4 205 386 271 473 2.49e-23 101
Msa0873100 AT5G49690.1 33.136 169 99 4 208 363 266 433 1.20e-22 99.8
Msa0873100 AT3G21800.1 22.363 474 263 13 12 385 7 475 2.24e-22 99.0
Msa0873100 AT3G21780.1 23.729 472 261 17 8 385 2 468 7.41e-22 97.4
Msa0873100 AT2G29750.1 27.962 211 120 5 202 386 270 474 5.00e-21 95.1
Msa0873100 AT1G64910.1 25.293 427 241 16 10 367 6 423 2.55e-16 80.9
Msa0873100 AT5G53990.1 24.344 419 247 14 10 363 6 419 3.06e-16 80.5
Msa0873100 AT3G29630.2 23.858 394 262 9 8 369 4 391 3.07e-16 80.5
Msa0873100 AT4G01070.2 25.325 308 164 10 6 253 4 305 5.70e-15 75.9
Msa0873100 AT2G22590.1 23.490 447 255 13 1 361 1 446 1.70e-14 75.1
Msa0873100 AT4G27570.1 26.087 161 100 2 207 348 248 408 1.92e-14 75.1
Msa0873100 AT1G50580.1 25.066 379 223 12 8 328 4 379 2.35e-14 74.7
Msa0873100 AT4G27560.1 26.708 161 99 2 207 348 248 408 2.68e-14 74.7
Msa0873100 AT3G29630.1 27.841 176 108 2 209 369 246 417 9.91e-14 72.8
Msa0873100 AT5G54010.1 26.857 175 108 3 208 367 249 418 2.86e-13 71.6
Msa0873100 AT4G09500.1 27.684 177 107 5 208 363 218 394 2.49e-12 68.6
Msa0873100 AT4G09500.2 27.684 177 107 5 208 363 243 419 2.54e-12 68.6
Msa0873100 AT2G22930.1 26.633 199 119 5 215 392 250 442 2.86e-12 68.2
Msa0873100 AT4G34135.2 23.125 320 174 8 6 253 7 326 3.39e-12 67.4
Msa0873100 AT5G54060.1 31.818 132 74 2 203 318 262 393 3.79e-11 65.1

Find 89 sgRNAs with CRISPR-Local

Find 187 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATTCTACCATAATATATT+TGG 0.173415 6_1:+8739142 None:intergenic
GAAGTTCACAAAAGGGTTTA+AGG 0.265332 6_1:+8740549 None:intergenic
GGACACCAACTTGCTATTAT+AGG 0.272659 6_1:+8738698 None:intergenic
GTTTGGAAACTAAAGTAGTT+TGG 0.305477 6_1:-8739225 Msa0873100:CDS
TCCGTTGTTTATGTGAATTT+TGG 0.307503 6_1:-8738877 Msa0873100:CDS
GTAAAACTACTTCACCTTAG+AGG 0.320618 6_1:-8740761 Msa0873100:CDS
CAAATAAATCTACAGTTTGT+TGG 0.321938 6_1:+8738551 None:intergenic
ATTCTTTAGGTTCCAACCTT+TGG 0.323441 6_1:-8738948 Msa0873100:intron
AGGACATTCTTGACTATATC+AGG 0.339493 6_1:-8739174 Msa0873100:CDS
CAACAGATCCAAATATATTA+TGG 0.343858 6_1:-8739150 Msa0873100:intron
TCTAGTGTTGTTAGACCATC+TGG 0.347657 6_1:+8740632 None:intergenic
AAAATCAGTCAAACCATCTA+AGG 0.349085 6_1:+8740670 None:intergenic
ACTAAAGTAGTTTGGATTCC+AGG 0.350690 6_1:-8739217 Msa0873100:CDS
ATTTGTAATGAATGGGAGAT+TGG 0.359619 6_1:-8738533 Msa0873100:CDS
GAACCTGGACAAAGTGATTA+AGG 0.362862 6_1:-8738357 Msa0873100:CDS
GTTGGAATTTGCTTGGGGTT+TGG 0.365245 6_1:-8738824 Msa0873100:CDS
GCAACTGTTGGAATTTGCTT+GGG 0.371369 6_1:-8738830 Msa0873100:CDS
AGAGGTCCAAATGCCTTAGA+TGG 0.381340 6_1:-8740683 Msa0873100:CDS
GTAGATTTATTTGTAATGAA+TGG 0.382641 6_1:-8738541 Msa0873100:CDS
TTATCTAACAAATGGATGTT+TGG 0.388363 6_1:-8739242 Msa0873100:CDS
ATATGGCCTTGAAGTGGATA+TGG 0.398841 6_1:+8740803 None:intergenic
GTCAAACCATCTAAGGCATT+TGG 0.401739 6_1:+8740677 None:intergenic
CTTCGTTCCTTTGTAGAAAG+AGG 0.403337 6_1:-8740371 Msa0873100:CDS
TAGATTTATTTGTAATGAAT+GGG 0.407079 6_1:-8738540 Msa0873100:CDS
TCAGAAACTAAGCAAGTAAC+TGG 0.411788 6_1:+8740494 None:intergenic
AGCAACTGTTGGAATTTGCT+TGG 0.413433 6_1:-8738831 Msa0873100:CDS
CCTAGTAAGAAGTTCACAAA+AGG 0.425707 6_1:+8740541 None:intergenic
AGGTTATGTGAAATCCTCTA+AGG 0.427688 6_1:+8740747 None:intergenic
GAAGTGATAGCTGGAGATAA+AGG 0.430452 6_1:-8738458 Msa0873100:CDS
ATTAGGCCTGATCTTGTCAT+TGG 0.431441 6_1:-8738772 Msa0873100:CDS
AGTATCTTCTTTCCAAAGGT+TGG 0.432689 6_1:+8738936 None:intergenic
TGCCATCTTCTTCAACTCCA+TGG 0.457949 6_1:+8738415 None:intergenic
GATGAGAGTTATCTAACAAA+TGG 0.462382 6_1:-8739250 Msa0873100:CDS
AGGCCTGATCTTGTCATTGG+TGG 0.464524 6_1:-8738769 Msa0873100:CDS
GATGGTCTAACAACACTAGA+AGG 0.465122 6_1:-8740629 Msa0873100:CDS
TTGACTCCATATCCACTTCA+AGG 0.469429 6_1:-8740809 Msa0873100:CDS
TGTTGTTAGACCATCTGGTA+TGG 0.484285 6_1:+8740637 None:intergenic
GCAAATTCCAACAGTTGCTC+TGG 0.484462 6_1:+8738835 None:intergenic
ATAAACTTAGTACCTTTGAA+TGG 0.484485 6_1:+8740341 None:intergenic
AACAACGGATCCCGGCTCCT+TGG 0.486045 6_1:+8738891 None:intergenic
TAAATCTACAGTTTGTTGGC+TGG 0.492981 6_1:+8738555 None:intergenic
GAGCCACCAATGACAAGATC+AGG 0.496376 6_1:+8738766 None:intergenic
TGGTTTAATACTTTCTCTTG+TGG 0.501218 6_1:+8738677 None:intergenic
GTCAAGAATCCTCCGATTGA+AGG 0.502297 6_1:+8738653 None:intergenic
AGGAAAGAAGATGAGGCAAA+AGG 0.504752 6_1:-8738438 Msa0873100:CDS
CTGATCAATGAAGTGATAGC+TGG 0.507213 6_1:-8738467 Msa0873100:CDS
TTCACATAAACAACGGATCC+CGG 0.510656 6_1:+8738883 None:intergenic
TCTTGAATGGCTTGAATCCA+AGG 0.512622 6_1:-8738908 Msa0873100:CDS
CCTCCTTAATCACTTTGTCC+AGG 0.523405 6_1:+8738354 None:intergenic
ATGGCTTGAATCCAAGGAGC+CGG 0.525604 6_1:-8738902 Msa0873100:CDS
TAATGAATGGGAGATTGGTA+TGG 0.527344 6_1:-8738528 Msa0873100:CDS
ACCACTGAAAGCATATGTGC+TGG 0.528505 6_1:-8738611 Msa0873100:CDS
GTATTAAACCACCCTTCAAT+CGG 0.530618 6_1:-8738665 Msa0873100:CDS
CGATACAAATGTGAAGAGAA+AGG 0.538783 6_1:-8738501 Msa0873100:CDS
GGCCATGGAGTTGAAGAAGA+TGG 0.539500 6_1:-8738417 Msa0873100:CDS
CTAGTAAGAAGTTCACAAAA+GGG 0.542225 6_1:+8740542 None:intergenic
GATTCTTGACTCATTGTGGA+TGG 0.548360 6_1:-8738640 Msa0873100:CDS
GAAGATGAGGCAAAAGGCCA+TGG 0.548548 6_1:-8738432 Msa0873100:CDS
CTGGAGTGCCGATGTTGTGT+TGG 0.552317 6_1:-8738592 Msa0873100:CDS
TGGCTTGAATCCAAGGAGCC+GGG 0.553822 6_1:-8738901 Msa0873100:CDS
GCAAGTAACTGGTGGAACAT+TGG 0.554157 6_1:+8740505 None:intergenic
AAATGTGAAGAGAAAGGAGT+TGG 0.554578 6_1:-8738495 Msa0873100:CDS
CAACTGTTGGAATTTGCTTG+GGG 0.557924 6_1:-8738829 Msa0873100:CDS
ATTGTATTCAATGTTGACAA+AGG 0.558897 6_1:+8740727 None:intergenic
ACTCAGTATCTTCTTTCCAA+AGG 0.563526 6_1:+8738932 None:intergenic
AAGATACTGAGTGTCTTGAA+TGG 0.564189 6_1:-8738921 Msa0873100:CDS
TCAAGAATCCTCCGATTGAA+GGG 0.571967 6_1:+8738654 None:intergenic
GGAGGATTCTTGACTCATTG+TGG 0.574210 6_1:-8738644 Msa0873100:CDS
TATGATTCCTCTTTCTACAA+AGG 0.576447 6_1:+8740364 None:intergenic
AGGTTTGAAACCATACCAGA+TGG 0.579491 6_1:-8740647 Msa0873100:CDS
AAACGTTTGCTCAAATCAAG+AGG 0.594156 6_1:-8740701 Msa0873100:CDS
AGAGGAATCATACCATTCAA+AGG 0.599027 6_1:-8740353 Msa0873100:intron
GGAGTTGAAGAAGATGGCAA+TGG 0.609106 6_1:-8738411 Msa0873100:CDS
TGGTTGTTCATACATGAACC+TGG 0.610957 6_1:-8738372 Msa0873100:CDS
GCCAAAATTCACATAAACAA+CGG 0.615682 6_1:+8738876 None:intergenic
TCCAGCACATATGCTTTCAG+TGG 0.616679 6_1:+8738610 None:intergenic
TATGACACCAGAGCAACTGT+TGG 0.617761 6_1:-8738842 Msa0873100:CDS
GAGATAAAGGAAAGAAGATG+AGG 0.620070 6_1:-8738445 Msa0873100:CDS
TTAAACCACCCTTCAATCGG+AGG 0.620443 6_1:-8738662 Msa0873100:CDS
GAAACTAAGCAAGTAACTGG+TGG 0.626441 6_1:+8740497 None:intergenic
AGAGGCCTATAATAGCAAGT+TGG 0.636363 6_1:-8738703 Msa0873100:CDS
GGATTGATATGGCCTTGAAG+TGG 0.637845 6_1:+8740797 None:intergenic
TATGGAGTCAACACAGCATG+TGG 0.640020 6_1:+8740821 None:intergenic
AGAATCCTCCGATTGAAGGG+TGG 0.643000 6_1:+8738657 None:intergenic
GCAATGGAGAACACTAGACC+AGG 0.653200 6_1:-8738395 Msa0873100:CDS
TTCATGTATGAACAACCACC+TGG 0.656051 6_1:+8738377 None:intergenic
CTAACAACACTAGAAGGAGA+CGG 0.691016 6_1:-8740623 Msa0873100:CDS
ATGGAGAACACTAGACCAGG+TGG 0.714990 6_1:-8738392 Msa0873100:CDS
CCTGGACAAAGTGATTAAGG+AGG 0.733769 6_1:-8738354 Msa0873100:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTTTAGATTAAAAATATAGA+CGG + chr6_1:8739575-8739594 None:intergenic 15.0%
!! ATAGAAATGTAAATTAGTTA+TGG + chr6_1:8739050-8739069 None:intergenic 15.0%
!! TTTAATTAACTATTCAGTAA+TGG + chr6_1:8739368-8739387 None:intergenic 15.0%
!! GTAAATTTAAAAAACAAATG+TGG - chr6_1:8739550-8739569 Msa0873100:intron 15.0%
!! CTTTAGATTAAAAATATAGA+CGG - chr6_1:8739575-8739594 Msa0873100:intron 15.0%
!! TAGATTTATTTGTAATGAAT+GGG - chr6_1:8740630-8740649 Msa0873100:CDS 15.0%
!!! AGTTTTACTAGTTTTAACAT+TGG + chr6_1:8738397-8738416 None:intergenic 20.0%
!! ATGAAAAATAGAGAACATTT+GGG + chr6_1:8738747-8738766 None:intergenic 20.0%
!! TATATATATATATATGAGGC+AGG - chr6_1:8738977-8738996 Msa0873100:intron 20.0%
!!! CGTCTATATTTTTAATCTAA+AGG - chr6_1:8739023-8739042 Msa0873100:intron 20.0%
!!! CGTCTATATTTTTAATCTAA+AGG + chr6_1:8739023-8739042 None:intergenic 20.0%
!!! AGTTTTATTAAAATTTGTGC+AGG + chr6_1:8739800-8739819 None:intergenic 20.0%
!! GAATTCTACCATAATATATT+TGG + chr6_1:8740031-8740050 None:intergenic 20.0%
!! GTAGATTTATTTGTAATGAA+TGG - chr6_1:8740629-8740648 Msa0873100:CDS 20.0%
!!! GTTTTAACATTGGATTGATA+TGG + chr6_1:8738387-8738406 None:intergenic 25.0%
! ATTGTATTCAATGTTGACAA+AGG + chr6_1:8738446-8738465 None:intergenic 25.0%
! CTTATAGATTGAGAAATAGA+AGG + chr6_1:8738592-8738611 None:intergenic 25.0%
! GATGAAAAATAGAGAACATT+TGG + chr6_1:8738748-8738767 None:intergenic 25.0%
! ATAAACTTAGTACCTTTGAA+TGG + chr6_1:8738832-8738851 None:intergenic 25.0%
! TAAAACTCAAATTGAAAGCA+TGG - chr6_1:8739104-8739123 Msa0873100:intron 25.0%
!!! ACTATTCAGTAATGGATTTA+TGG + chr6_1:8739360-8739379 None:intergenic 25.0%
!! TTCAATATTTTACGAGTTGT+GGG + chr6_1:8739396-8739415 None:intergenic 25.0%
!! ATTCAATATTTTACGAGTTG+TGG + chr6_1:8739397-8739416 None:intergenic 25.0%
! CAACTCGTAAAATATTGAAT+TGG - chr6_1:8739397-8739416 Msa0873100:intron 25.0%
!!! GCTGTTGATTCTAATTATAA+AGG - chr6_1:8739423-8739442 Msa0873100:intron 25.0%
! TACAAAAGTTAATAGCTTGA+AGG + chr6_1:8739887-8739906 None:intergenic 25.0%
! TTATCTAACAAATGGATGTT+TGG - chr6_1:8739928-8739947 Msa0873100:intron 25.0%
! CAACAGATCCAAATATATTA+TGG - chr6_1:8740020-8740039 Msa0873100:intron 25.0%
!!! AGAATTCCTTTTTGAAATTG+CGG - chr6_1:8740044-8740063 Msa0873100:intron 25.0%
! GGTTTAATAATGAAGGTAAA+GGG + chr6_1:8740178-8740197 None:intergenic 25.0%
! TGGTTTAATAATGAAGGTAA+AGG + chr6_1:8740179-8740198 None:intergenic 25.0%
! ATTCATCAATTGGATTCTTT+AGG - chr6_1:8740209-8740228 Msa0873100:intron 25.0%
! CAAAAATGGTTTATTGCAAT+TGG + chr6_1:8740372-8740391 None:intergenic 25.0%
!!! ATTGCAATAAACCATTTTTG+TGG - chr6_1:8740372-8740391 Msa0873100:CDS 25.0%
! ACAAATGAAATTTCAGATAG+AGG - chr6_1:8740449-8740468 Msa0873100:CDS 25.0%
! CAAATAAATCTACAGTTTGT+TGG + chr6_1:8740622-8740641 None:intergenic 25.0%
AAAATCAGTCAAACCATCTA+AGG + chr6_1:8738503-8738522 None:intergenic 30.0%
!! TAGATGGTTTGACTGATTTT+AGG - chr6_1:8738503-8738522 Msa0873100:CDS 30.0%
CTAGTAAGAAGTTCACAAAA+GGG + chr6_1:8738631-8738650 None:intergenic 30.0%
TATGATTCCTCTTTCTACAA+AGG + chr6_1:8738809-8738828 None:intergenic 30.0%
AAATATAGACGGTTGAGATT+TGG + chr6_1:8739586-8739605 None:intergenic 30.0%
!! GCTTTCAATTTGAGTTTTAC+TGG + chr6_1:8739103-8739122 None:intergenic 30.0%
! AATTGTATCAAAGAGTGTGT+GGG + chr6_1:8739175-8739194 None:intergenic 30.0%
TCCAAGAAATTAACCAAGAA+GGG + chr6_1:8739215-8739234 None:intergenic 30.0%
ATCCAAGAAATTAACCAAGA+AGG + chr6_1:8739216-8739235 None:intergenic 30.0%
TTCTTGGTTAATTTCTTGGA+TGG - chr6_1:8739215-8739234 Msa0873100:CDS 30.0%
AACTATCGTCATCATCAATT+GGG + chr6_1:8739286-8739305 None:intergenic 30.0%
TAACTATCGTCATCATCAAT+TGG + chr6_1:8739287-8739306 None:intergenic 30.0%
TTTAGATTGTATGAGTTTGC+TGG - chr6_1:8739318-8739337 Msa0873100:intron 30.0%
!!! TATGAGTTTGCTGGAATTTT+AGG - chr6_1:8739327-8739346 Msa0873100:intron 30.0%
! TCAATATTTTACGAGTTGTG+GGG + chr6_1:8739395-8739414 None:intergenic 30.0%
! TTGTGATTGTTGATTGAGAT+CGG - chr6_1:8739454-8739473 Msa0873100:intron 30.0%
!!! GTTTTTTAAATTTACTCGCC+TGG + chr6_1:8739545-8739564 None:intergenic 30.0%
AAATATAGACGGTTGAGATT+TGG - chr6_1:8739586-8739605 Msa0873100:intron 30.0%
! TCATATATTGGTGTTTGCTT+GGG - chr6_1:8739651-8739670 Msa0873100:intron 30.0%
GATGAGAGTTATCTAACAAA+TGG - chr6_1:8739920-8739939 Msa0873100:intron 30.0%
GTTTGGAAACTAAAGTAGTT+TGG - chr6_1:8739945-8739964 Msa0873100:intron 30.0%
TTCCAGGATTGAAAAACTTT+CGG - chr6_1:8739969-8739988 Msa0873100:intron 30.0%
ATTGAAAAACTTTCGGTTGA+AGG - chr6_1:8739976-8739995 Msa0873100:intron 30.0%
ATCTATCCGCAATTTCAAAA+AGG + chr6_1:8740053-8740072 None:intergenic 30.0%
! GGAGTTTGGTTTAATAATGA+AGG + chr6_1:8740185-8740204 None:intergenic 30.0%
ATTGATGAATTTGTGGAGTT+TGG + chr6_1:8740199-8740218 None:intergenic 30.0%
AACTCCACAAATTCATCAAT+TGG - chr6_1:8740199-8740218 Msa0873100:intron 30.0%
GAATCCAATTGATGAATTTG+TGG + chr6_1:8740206-8740225 None:intergenic 30.0%
! TCCGTTGTTTATGTGAATTT+TGG - chr6_1:8740293-8740312 Msa0873100:intron 30.0%
GCCAAAATTCACATAAACAA+CGG + chr6_1:8740297-8740316 None:intergenic 30.0%
!! AACCATTTTTGTGGATCATT+AGG - chr6_1:8740381-8740400 Msa0873100:CDS 30.0%
TGGTTTAATACTTTCTCTTG+TGG + chr6_1:8740496-8740515 None:intergenic 30.0%
ATTTGTAATGAATGGGAGAT+TGG - chr6_1:8740637-8740656 Msa0873100:CDS 30.0%
GTAAAACTACTTCACCTTAG+AGG - chr6_1:8738409-8738428 Msa0873100:CDS 35.0%
AGGTTATGTGAAATCCTCTA+AGG + chr6_1:8738426-8738445 None:intergenic 35.0%
AAACGTTTGCTCAAATCAAG+AGG - chr6_1:8738469-8738488 Msa0873100:CDS 35.0%
GAAGTTCACAAAAGGGTTTA+AGG + chr6_1:8738624-8738643 None:intergenic 35.0%
CCTAGTAAGAAGTTCACAAA+AGG + chr6_1:8738632-8738651 None:intergenic 35.0%
! CCTTTTGTGAACTTCTTACT+AGG - chr6_1:8738629-8738648 Msa0873100:CDS 35.0%
TCAGAAACTAAGCAAGTAAC+TGG + chr6_1:8738679-8738698 None:intergenic 35.0%
AGAGGAATCATACCATTCAA+AGG - chr6_1:8738817-8738836 Msa0873100:CDS 35.0%
CAGAAGAAAACGAGGAATAT+CGG + chr6_1:8739130-8739149 None:intergenic 35.0%
AAATTGTCCAGAAGAAAACG+AGG + chr6_1:8739138-8739157 None:intergenic 35.0%
! ATTGTATCAAAGAGTGTGTG+GGG + chr6_1:8739174-8739193 None:intergenic 35.0%
! CAATTGTATCAAAGAGTGTG+TGG + chr6_1:8739176-8739195 None:intergenic 35.0%
AGAAATTAACCAAGAAGGGA+AGG + chr6_1:8739211-8739230 None:intergenic 35.0%
TCCCTTCTTGGTTAATTTCT+TGG - chr6_1:8739211-8739230 Msa0873100:CDS 35.0%
ACATCAAGTGAAAAAAGACC+AGG - chr6_1:8739524-8739543 Msa0873100:intron 35.0%
CAAACACCAATATATGAGAC+AGG + chr6_1:8739648-8739667 None:intergenic 35.0%
! CTCATATATTGGTGTTTGCT+TGG - chr6_1:8739650-8739669 Msa0873100:intron 35.0%
ACTAAAGTAGTTTGGATTCC+AGG - chr6_1:8739953-8739972 Msa0873100:intron 35.0%
!! AACCGAAAGTTTTTCAATCC+TGG + chr6_1:8739974-8739993 None:intergenic 35.0%
AGGACATTCTTGACTATATC+AGG - chr6_1:8739996-8740015 Msa0873100:intron 35.0%
GTAAAGAGAAGGAAACATAG+AGG + chr6_1:8740147-8740166 None:intergenic 35.0%
! ATTCTTTAGGTTCCAACCTT+TGG - chr6_1:8740222-8740241 Msa0873100:intron 35.0%
AGTATCTTCTTTCCAAAGGT+TGG + chr6_1:8740237-8740256 None:intergenic 35.0%
ACTCAGTATCTTCTTTCCAA+AGG + chr6_1:8740241-8740260 None:intergenic 35.0%
AAGATACTGAGTGTCTTGAA+TGG - chr6_1:8740249-8740268 Msa0873100:intron 35.0%
GTATTAAACCACCCTTCAAT+CGG - chr6_1:8740505-8740524 Msa0873100:CDS 35.0%
AAAAATGGCCAACACAACAT+CGG + chr6_1:8740589-8740608 None:intergenic 35.0%
!! TAAATCTACAGTTTGTTGGC+TGG + chr6_1:8740618-8740637 None:intergenic 35.0%
TAATGAATGGGAGATTGGTA+TGG - chr6_1:8740642-8740661 Msa0873100:CDS 35.0%
CGATACAAATGTGAAGAGAA+AGG - chr6_1:8740669-8740688 Msa0873100:CDS 35.0%
AAATGTGAAGAGAAAGGAGT+TGG - chr6_1:8740675-8740694 Msa0873100:CDS 35.0%
GAGATAAAGGAAAGAAGATG+AGG - chr6_1:8740725-8740744 Msa0873100:CDS 35.0%
TTGACTCCATATCCACTTCA+AGG - chr6_1:8738361-8738380 Msa0873100:CDS 40.0%
! ATATGGCCTTGAAGTGGATA+TGG + chr6_1:8738370-8738389 None:intergenic 40.0%
! GTCAAACCATCTAAGGCATT+TGG + chr6_1:8738496-8738515 None:intergenic 40.0%
! AGGTTTGAAACCATACCAGA+TGG - chr6_1:8738523-8738542 Msa0873100:CDS 40.0%
TGTTGTTAGACCATCTGGTA+TGG + chr6_1:8738536-8738555 None:intergenic 40.0%
! TCTAGTGTTGTTAGACCATC+TGG + chr6_1:8738541-8738560 None:intergenic 40.0%
GATGGTCTAACAACACTAGA+AGG - chr6_1:8738541-8738560 Msa0873100:CDS 40.0%
CTAACAACACTAGAAGGAGA+CGG - chr6_1:8738547-8738566 Msa0873100:CDS 40.0%
GAAACTAAGCAAGTAACTGG+TGG + chr6_1:8738676-8738695 None:intergenic 40.0%
CTTCGTTCCTTTGTAGAAAG+AGG - chr6_1:8738799-8738818 Msa0873100:CDS 40.0%
TGGTGTGCAACTCAGAAAAA+AGG + chr6_1:8739083-8739102 None:intergenic 40.0%
! CGATATTCCTCGTTTTCTTC+TGG - chr6_1:8739128-8739147 Msa0873100:intron 40.0%
TATGTATCTCCTTCCCTTCT+TGG - chr6_1:8739199-8739218 Msa0873100:intron 40.0%
AATACACATGCCTTCGTTCT+TGG - chr6_1:8739487-8739506 Msa0873100:intron 40.0%
ACGGATCCTGTCTCATATAT+TGG - chr6_1:8739639-8739658 Msa0873100:intron 40.0%
! ATTTCACCCGGTGTCAATTT+CGG - chr6_1:8739710-8739729 Msa0873100:intron 40.0%
GGTTGCTACTAACAATGCAA+CGG - chr6_1:8739744-8739763 Msa0873100:intron 40.0%
TTTCCTTCTCTTTACCCCAT+TGG - chr6_1:8740152-8740171 Msa0873100:intron 40.0%
AATGAAGGTAAAGGGCCAAT+GGG + chr6_1:8740170-8740189 None:intergenic 40.0%
TAATGAAGGTAAAGGGCCAA+TGG + chr6_1:8740171-8740190 None:intergenic 40.0%
TCTTGAATGGCTTGAATCCA+AGG - chr6_1:8740262-8740281 Msa0873100:intron 40.0%
TTCACATAAACAACGGATCC+CGG + chr6_1:8740290-8740309 None:intergenic 40.0%
! AGCAACTGTTGGAATTTGCT+TGG - chr6_1:8740339-8740358 Msa0873100:intron 40.0%
! GCAACTGTTGGAATTTGCTT+GGG - chr6_1:8740340-8740359 Msa0873100:intron 40.0%
! CAACTGTTGGAATTTGCTTG+GGG - chr6_1:8740341-8740360 Msa0873100:intron 40.0%
GGCCTAATGATCCACAAAAA+TGG + chr6_1:8740386-8740405 None:intergenic 40.0%
ATTAGGCCTGATCTTGTCAT+TGG - chr6_1:8740398-8740417 Msa0873100:CDS 40.0%
! GCTCAGTGATTTTGTCATCT+GGG - chr6_1:8740423-8740442 Msa0873100:CDS 40.0%
AGAGGCCTATAATAGCAAGT+TGG - chr6_1:8740467-8740486 Msa0873100:CDS 40.0%
!! GGACACCAACTTGCTATTAT+AGG + chr6_1:8740475-8740494 None:intergenic 40.0%
TCAAGAATCCTCCGATTGAA+GGG + chr6_1:8740519-8740538 None:intergenic 40.0%
GATTCTTGACTCATTGTGGA+TGG - chr6_1:8740530-8740549 Msa0873100:CDS 40.0%
CTGATCAATGAAGTGATAGC+TGG - chr6_1:8740703-8740722 Msa0873100:CDS 40.0%
GAAGTGATAGCTGGAGATAA+AGG - chr6_1:8740712-8740731 Msa0873100:CDS 40.0%
AGGAAAGAAGATGAGGCAAA+AGG - chr6_1:8740732-8740751 Msa0873100:CDS 40.0%
TTCATGTATGAACAACCACC+TGG + chr6_1:8740796-8740815 None:intergenic 40.0%
TGGTTGTTCATACATGAACC+TGG - chr6_1:8740798-8740817 Msa0873100:CDS 40.0%
GAACCTGGACAAAGTGATTA+AGG - chr6_1:8740813-8740832 Msa0873100:CDS 40.0%
TATGGAGTCAACACAGCATG+TGG + chr6_1:8738352-8738371 None:intergenic 45.0%
! GGATTGATATGGCCTTGAAG+TGG + chr6_1:8738376-8738395 None:intergenic 45.0%
AGAGGTCCAAATGCCTTAGA+TGG - chr6_1:8738487-8738506 Msa0873100:CDS 45.0%
GCAAGTAACTGGTGGAACAT+TGG + chr6_1:8738668-8738687 None:intergenic 45.0%
!! CGGTTGAGATTTGGTGTCAA+CGG + chr6_1:8739595-8739614 None:intergenic 45.0%
! TCGTTTTCTGCCAAGAACGA+AGG + chr6_1:8739500-8739519 None:intergenic 45.0%
TCAACGAATTCGTTGACACC+TGG - chr6_1:8739611-8739630 Msa0873100:intron 45.0%
ATCGAACATGAGACCTTGAG+AGG + chr6_1:8739692-8739711 None:intergenic 45.0%
GTCTCATGTTCGATTTCACC+CGG - chr6_1:8739698-8739717 Msa0873100:intron 45.0%
!! TCAATTTCGGTGGGCTAGTT+CGG - chr6_1:8739723-8739742 Msa0873100:intron 45.0%
ATGAAGGTAAAGGGCCAATG+GGG + chr6_1:8740169-8740188 None:intergenic 45.0%
TATGACACCAGAGCAACTGT+TGG - chr6_1:8740328-8740347 Msa0873100:intron 45.0%
GCAAATTCCAACAGTTGCTC+TGG + chr6_1:8740338-8740357 None:intergenic 45.0%
! GTTGGAATTTGCTTGGGGTT+TGG - chr6_1:8740346-8740365 Msa0873100:intron 45.0%
! GGCTCAGTGATTTTGTCATC+TGG - chr6_1:8740422-8740441 Msa0873100:CDS 45.0%
TTAAACCACCCTTCAATCGG+AGG - chr6_1:8740508-8740527 Msa0873100:CDS 45.0%
GTCAAGAATCCTCCGATTGA+AGG + chr6_1:8740520-8740539 None:intergenic 45.0%
GGAGGATTCTTGACTCATTG+TGG - chr6_1:8740526-8740545 Msa0873100:CDS 45.0%
! ACCACTGAAAGCATATGTGC+TGG - chr6_1:8740559-8740578 Msa0873100:intron 45.0%
TCCAGCACATATGCTTTCAG+TGG + chr6_1:8740563-8740582 None:intergenic 45.0%
! GTTGGCTGGTCAGCAAAAAA+TGG + chr6_1:8740604-8740623 None:intergenic 45.0%
TGCCATCTTCTTCAACTCCA+TGG + chr6_1:8740758-8740777 None:intergenic 45.0%
GGAGTTGAAGAAGATGGCAA+TGG - chr6_1:8740759-8740778 Msa0873100:CDS 45.0%
CCTCCTTAATCACTTTGTCC+AGG + chr6_1:8740819-8740838 None:intergenic 45.0%
CCTGGACAAAGTGATTAAGG+AGG - chr6_1:8740816-8740835 Msa0873100:CDS 45.0%
!! TATATATATATATATATATG+AGG - chr6_1:8738973-8738992 Msa0873100:intron 5.0%
CGTTCTTGGCAGAAAACGAG+TGG - chr6_1:8739501-8739520 Msa0873100:intron 50.0%
! TCGTTGACACCTGGTGTCAA+CGG - chr6_1:8739620-8739639 Msa0873100:intron 50.0%
! TTGGTGTTTGCTTGGGACCT+AGG - chr6_1:8739658-8739677 Msa0873100:intron 50.0%
TAGCCCACCGAAATTGACAC+CGG + chr6_1:8739720-8739739 None:intergenic 50.0%
ATGGCTTGAATCCAAGGAGC+CGG - chr6_1:8740268-8740287 Msa0873100:intron 50.0%
AGGCCTGATCTTGTCATTGG+TGG - chr6_1:8740401-8740420 Msa0873100:CDS 50.0%
GAGCCACCAATGACAAGATC+AGG + chr6_1:8740407-8740426 None:intergenic 50.0%
AGAATCCTCCGATTGAAGGG+TGG + chr6_1:8740516-8740535 None:intergenic 50.0%
GAAGATGAGGCAAAAGGCCA+TGG - chr6_1:8740738-8740757 Msa0873100:CDS 50.0%
GGCCATGGAGTTGAAGAAGA+TGG - chr6_1:8740753-8740772 Msa0873100:CDS 50.0%
GCAATGGAGAACACTAGACC+AGG - chr6_1:8740775-8740794 Msa0873100:CDS 50.0%
ATGGAGAACACTAGACCAGG+TGG - chr6_1:8740778-8740797 Msa0873100:CDS 50.0%
AGACAGGATCCGTTGACACC+AGG + chr6_1:8739632-8739651 None:intergenic 55.0%
! CTTGAGAGGAGCACACTCCT+AGG + chr6_1:8739678-8739697 None:intergenic 55.0%
! CTAGGAGTGTGCTCCTCTCA+AGG - chr6_1:8739676-8739695 Msa0873100:intron 55.0%
! TCACCCGGTGTCAATTTCGG+TGG - chr6_1:8739713-8739732 Msa0873100:intron 55.0%
! CACCCGGTGTCAATTTCGGT+GGG - chr6_1:8739714-8739733 Msa0873100:intron 55.0%
AGCCCACCGAAATTGACACC+GGG + chr6_1:8739719-8739738 None:intergenic 55.0%
GGGCCAATGGGGTAAAGAGA+AGG + chr6_1:8740158-8740177 None:intergenic 55.0%
TGGCTTGAATCCAAGGAGCC+GGG - chr6_1:8740269-8740288 Msa0873100:intron 55.0%
!! CTGGAGTGCCGATGTTGTGT+TGG - chr6_1:8740578-8740597 Msa0873100:intron 55.0%
AACAACGGATCCCGGCTCCT+TGG + chr6_1:8740282-8740301 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 8738325 8740867 8738325 ID=Msa0873100;Name=Msa0873100
chr6_1 mRNA 8738325 8740867 8738325 ID=Msa0873100-mRNA-1;Parent=Msa0873100;Name=Msa0873100-mRNA-1;_AED=0.39;_eAED=0.39;_QI=0|0.2|0|1|0|0.16|6|0|393
chr6_1 exon 8740619 8740867 8740619 ID=Msa0873100-mRNA-1:exon:2672;Parent=Msa0873100-mRNA-1
chr6_1 exon 8740354 8740576 8740354 ID=Msa0873100-mRNA-1:exon:2671;Parent=Msa0873100-mRNA-1
chr6_1 exon 8739202 8739271 8739202 ID=Msa0873100-mRNA-1:exon:2670;Parent=Msa0873100-mRNA-1
chr6_1 exon 8739151 8739194 8739151 ID=Msa0873100-mRNA-1:exon:2669;Parent=Msa0873100-mRNA-1
chr6_1 exon 8738765 8738961 8738765 ID=Msa0873100-mRNA-1:exon:2668;Parent=Msa0873100-mRNA-1
chr6_1 exon 8738325 8738723 8738325 ID=Msa0873100-mRNA-1:exon:2667;Parent=Msa0873100-mRNA-1
chr6_1 CDS 8740619 8740867 8740619 ID=Msa0873100-mRNA-1:cds;Parent=Msa0873100-mRNA-1
chr6_1 CDS 8740354 8740576 8740354 ID=Msa0873100-mRNA-1:cds;Parent=Msa0873100-mRNA-1
chr6_1 CDS 8739202 8739271 8739202 ID=Msa0873100-mRNA-1:cds;Parent=Msa0873100-mRNA-1
chr6_1 CDS 8739151 8739194 8739151 ID=Msa0873100-mRNA-1:cds;Parent=Msa0873100-mRNA-1
chr6_1 CDS 8738765 8738961 8738765 ID=Msa0873100-mRNA-1:cds;Parent=Msa0873100-mRNA-1
chr6_1 CDS 8738325 8738723 8738325 ID=Msa0873100-mRNA-1:cds;Parent=Msa0873100-mRNA-1
Gene Sequence

>Msa0873100

ATGGGAAACTTTGCAAACAGAAAACCACATGCTGTGTTGACTCCATATCCACTTCAAGGCCATATCAATCCAATGTTAAAACTAGTAAAACTACTTCACCTTAGAGGATTTCACATAACCTTTGTCAACATTGAATACAATCATAAACGTTTGCTCAAATCAAGAGGTCCAAATGCCTTAGATGGTTTGACTGATTTTAGGTTTGAAACCATACCAGATGGTCTAACAACACTAGAAGGAGACGGTGATAATTTCCTTAAACCCTTTTGTGAACTTCTTACTAGGCTTAATCACTCTGCCAATGTTCCACCAGTTACTTGCTTAGTTTCTGATTCTTGTATGAGCTTTACTATACAAGCTGCTGAAGAATTTGCACTCCCAAATGTTCTCTATTTTTCATCAAGTGCATGTTGTTTATTGATTGTTATGTATCTTCGTTCCTTTGTAGAAAGAGGAATCATACCATTCAAAGATGAGAGTTATCTAACAAATGGATGTTTGGAAACTAAAGTAGTTTGGATTCCAGGATTGAAAAACTTTCGGACATTCTTGACTATATCAGGACAACAGATCCAAATATATTATGGTTCCAACCTTTGGAAAGAAGATACTGAGTGTCTTGAATGGCTTGAATCCAAGGAGCCGGGATCCGTTGTTTATGTGAATTTTGGCAGCATTACAGTTATGACACCAGAGCAACTGTTGGAATTTGCTTGGGGTTTGGCCAATTGCAATAAACCATTTTTGTGGATCATTAGGCCTGATCTTGTCATTGGTGGCTCAAGGCCTATAATAGCAAGTTGGTGTCCACAAGAGAAAGTATTAAACCACCCTTCAATCGGAGGATTCTTGACTCATTGTGGATGGAACTCAACCACTGAAAGCATATGTGCTGGAGTGCCGATGTTGTGTTGGCCATTTTTTGCTGACCAGCCAACAAACTGTAGATTTATTTGTAATGAATGGGAGATTGGTATGGAAATCGATACAAATGTGAAGAGAAAGGAGTTGGCGAAGCTGATCAATGAAGTGATAGCTGGAGATAAAGGAAAGAAGATGAGGCAAAAGGCCATGGAGTTGAAGAAGATGGCAATGGAGAACACTAGACCAGGTGGTTGTTCATACATGAACCTGGACAAAGTGATTAAGGAGGTGTTGCTTAAACAAAATTTGATTGAATGA
Protein sequence

>Msa0873100

MGNFANRKPHAVLTPYPLQGHINPMLKLVKLLHLRGFHITFVNIEYNHKRLLKSRGPNALDGLTDFRFETIPDGLTTLEGDGDNFLKPFCELLTRLNHSANVPPVTCLVSDSCMSFTIQAAEEFALPNVLYFSSSACCLLIVMYLRSFVERGIIPFKDESYLTNGCLETKVVWIPGLKNFRTFLTISGQQIQIYYGSNLWKEDTECLEWLESKEPGSVVYVNFGSITVMTPEQLLEFAWGLANCNKPFLWIIRPDLVIGGSRPIIASWCPQEKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTNCRFICNEWEIGMEIDTNVKRKELAKLINEVIAGDKGKKMRQKAMELKKMAMENTRPGGCSYMNLDKVIKEVLLKQNLIE*