AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0874770

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0874770 MtrunA17_Chr6g0455511 100.000 250 0 0 1 250 1 250 0.0 519
Msa0874770 MtrunA17_Chr7g0220111 87.698 252 26 4 1 250 1 249 3.51e-161 446
Msa0874770 MtrunA17_Chr3g0122251 65.759 257 68 6 1 249 1 245 2.10e-110 318
Msa0874770 MtrunA17_Chr5g0420091 63.470 219 75 2 1 218 1 215 2.30e-97 283
Msa0874770 MtrunA17_Chr4g0061671 66.667 174 57 1 1 174 1 173 3.14e-79 236
Msa0874770 MtrunA17_Chr8g0351051 50.000 256 117 7 1 250 1 251 2.28e-72 221
Msa0874770 MtrunA17_Chr4g0061691 60.355 169 66 1 1 168 1 169 7.75e-63 196
Msa0874770 MtrunA17_Chr8g0377551 55.729 192 67 7 63 249 1 179 1.26e-58 184
Msa0874770 MtrunA17_Chr8g0366231 45.374 227 114 3 1 226 1 218 8.84e-57 181
Msa0874770 MtrunA17_Chr6g0474371 50.838 179 86 1 1 177 1 179 2.36e-54 173
Msa0874770 MtrunA17_Chr7g0220121 40.234 256 142 5 1 250 1 251 2.65e-51 167
Msa0874770 MtrunA17_Chr1g0204111 49.133 173 85 2 1 171 17 188 1.50e-50 166
Msa0874770 MtrunA17_Chr5g0420081 49.425 174 87 1 1 173 1 174 4.13e-50 164
Msa0874770 MtrunA17_Chr4g0057151 50.000 168 82 2 1 167 1 167 3.39e-46 153
Msa0874770 MtrunA17_Chr3g0077501 46.667 180 84 4 1 174 1 174 1.06e-44 149
Msa0874770 MtrunA17_Chr8g0380021 46.629 178 85 4 1 173 17 189 5.82e-44 148
Msa0874770 MtrunA17_Chr3g0097101 41.071 224 118 5 1 220 16 229 6.34e-44 148
Msa0874770 MtrunA17_Chr8g0351031 42.995 207 107 5 1 202 1 201 1.08e-43 147
Msa0874770 MtrunA17_Chr2g0284911 44.828 174 94 2 1 173 16 188 3.25e-43 147
Msa0874770 MtrunA17_Chr7g0246431 48.521 169 85 2 1 168 1 168 7.81e-43 144
Msa0874770 MtrunA17_Chr2g0279821 41.489 188 109 1 1 188 1 187 1.52e-42 144
Msa0874770 MtrunA17_Chr8g0351041 46.667 165 79 4 1 160 1 161 4.15e-40 136
Msa0874770 MtrunA17_Chr5g0411691 35.398 226 131 3 1 213 1 224 4.63e-39 135
Msa0874770 MtrunA17_Chr4g0049541 37.850 214 122 3 1 205 1 212 7.68e-39 134
Msa0874770 MtrunA17_Chr8g0377561 98.361 61 1 0 1 61 1 61 9.03e-37 125
Msa0874770 MtrunA17_Chr4g0018421 43.195 169 94 2 1 167 1 169 2.95e-36 127
Msa0874770 MtrunA17_Chr4g0020221 46.067 178 90 3 1 174 1 176 1.91e-34 124
Msa0874770 MtrunA17_Chr1g0164791 41.954 174 94 4 1 168 1 173 2.23e-34 123
Msa0874770 MtrunA17_Chr5g0427401 36.364 220 125 6 1 216 1 209 5.09e-34 122
Msa0874770 MtrunA17_Chr7g0246381 83.824 68 11 0 1 68 1 68 1.68e-33 116
Msa0874770 MtrunA17_Chr3g0125241 45.205 146 75 2 1 145 26 167 1.89e-33 120
Msa0874770 MtrunA17_Chr5g0412271 43.407 182 96 4 1 179 1 178 2.36e-33 120
Msa0874770 MtrunA17_Chr2g0308251 69.333 75 23 0 1 75 1 75 2.64e-32 113
Msa0874770 MtrunA17_Chr5g0412461 43.529 170 90 3 1 167 1 167 1.28e-31 116
Msa0874770 MtrunA17_Chr1g0159661 38.547 179 91 4 1 173 1 166 9.86e-29 107
Msa0874770 MtrunA17_Chr5g0404951 36.190 210 116 6 1 202 1 200 1.14e-28 108
Msa0874770 MtrunA17_Chr3g0142191 41.139 158 87 3 1 157 1 153 1.41e-28 108
Msa0874770 MtrunA17_Chr4g0049901 39.247 186 104 5 1 181 27 208 3.27e-27 105
Msa0874770 MtrunA17_Chr1g0173161 69.565 69 21 0 1 69 1 69 3.50e-26 97.8
Msa0874770 MtrunA17_Chr5g0427921 63.333 60 22 0 1 60 1 60 1.27e-21 85.1
Msa0874770 MtrunA17_Chr4g0044071 64.912 57 20 0 1 57 1 57 7.72e-21 84.7
Msa0874770 MtrunA17_Chr3g0134451 58.571 70 29 0 1 70 1 70 7.98e-21 89.4
Msa0874770 MtrunA17_Chr5g0425191 66.667 57 19 0 1 57 1 57 1.66e-20 83.6
Msa0874770 MtrunA17_Chr2g0308271 32.000 200 113 6 54 250 27 206 3.59e-20 85.5
Msa0874770 MtrunA17_Chr2g0292791 52.174 69 32 1 2 70 9 76 1.89e-17 79.0
Msa0874770 MtrunA17_Chr1g0166611 75.556 45 11 0 16 60 20 64 2.17e-17 76.3
Msa0874770 MtrunA17_Chr1g0208561 49.275 69 34 1 2 70 9 76 6.43e-17 77.4
Msa0874770 MtrunA17_Chr1g0208581 49.275 69 34 1 2 70 9 76 6.50e-17 77.0
Msa0874770 MtrunA17_Chr3g0089141 49.275 69 34 1 2 70 9 76 7.34e-17 77.0
Msa0874770 MtrunA17_Chr2g0325971 47.826 69 35 1 2 70 9 76 1.46e-16 76.3
Msa0874770 MtrunA17_Chr3g0099421 52.174 69 32 1 2 70 34 101 1.68e-16 76.6
Msa0874770 MtrunA17_Chr8g0379021 42.708 96 50 3 2 96 12 103 5.57e-16 73.6
Msa0874770 MtrunA17_Chr3g0099411 49.275 69 34 1 2 70 9 76 5.86e-16 74.3
Msa0874770 MtrunA17_Chr5g0419601 51.429 70 33 1 1 70 8 76 6.96e-16 74.7
Msa0874770 MtrunA17_Chr8g0355091 49.275 69 34 1 2 70 9 76 7.54e-16 74.3
Msa0874770 MtrunA17_Chr1g0187361 49.275 69 34 1 2 70 9 76 7.85e-16 74.3
Msa0874770 MtrunA17_Chr1g0206701 49.275 69 34 1 2 70 9 76 8.95e-16 74.3
Msa0874770 MtrunA17_Chr1g0206721 49.275 69 34 1 2 70 9 76 9.32e-16 74.3
Msa0874770 MtrunA17_Chr1g0149391 50.725 69 33 1 2 70 9 76 2.33e-15 73.2
Msa0874770 MtrunA17_Chr2g0317451 50.725 69 33 1 2 70 9 76 3.12e-15 72.8
Msa0874770 MtrunA17_Chr1g0188671 49.275 69 34 1 2 70 47 114 3.42e-15 73.2
Msa0874770 MtrunA17_Chr2g0317481 50.725 69 33 1 2 70 9 76 3.52e-15 72.8
Msa0874770 MtrunA17_Chr2g0333981 48.611 72 36 1 1 72 11 81 9.77e-15 70.1
Msa0874770 MtrunA17_Chr1g0206991 46.377 69 36 1 2 70 9 76 1.13e-14 70.1
Msa0874770 MtrunA17_Chr8g0357771 49.206 63 31 1 1 63 1 62 1.54e-14 69.7
Msa0874770 MtrunA17_Chr8g0376821 52.632 57 27 0 1 57 1 57 1.96e-14 69.3
Msa0874770 MtrunA17_Chr5g0417661 47.143 70 30 1 1 70 56 118 2.35e-14 67.8
Msa0874770 MtrunA17_Chr5g0422941 49.275 69 34 1 2 70 9 76 2.68e-14 70.1
Msa0874770 MtrunA17_Chr5g0422421 49.275 69 34 1 2 70 9 76 3.77e-14 69.7
Msa0874770 MtrunA17_Chr1g0169761 52.632 57 27 0 1 57 1 57 6.26e-14 68.2
Msa0874770 MtrunA17_Chr4g0052061 32.168 143 85 5 1 139 1 135 9.62e-14 67.0
Msa0874770 MtrunA17_Chr1g0175611 50.877 57 28 0 1 57 1 57 1.24e-13 67.0
Msa0874770 MtrunA17_Chr2g0300441 46.479 71 35 2 2 70 7 76 2.29e-13 67.4
Msa0874770 MtrunA17_Chr1g0180591 49.123 57 29 0 1 57 1 57 2.92e-13 66.2
Msa0874770 MtrunA17_Chr3g0119901 42.857 70 39 1 1 70 8 76 3.04e-13 66.6
Msa0874770 MtrunA17_Chr4g0074101 49.123 57 29 0 1 57 1 57 3.62e-13 66.2
Msa0874770 MtrunA17_Chr3g0089151 43.478 69 38 1 2 70 9 76 3.97e-13 64.7
Msa0874770 MtrunA17_Chr1g0175601 50.877 57 28 0 1 57 1 57 4.73e-13 65.5
Msa0874770 MtrunA17_Chr3g0085241 42.857 70 39 1 1 70 40 108 8.12e-13 66.2
Msa0874770 MtrunA17_Chr2g0300421 50.000 56 28 0 2 57 9 64 1.40e-12 64.3
Msa0874770 MtrunA17_Chr4g0018951 46.835 79 35 2 16 94 26 97 1.45e-12 63.9
Msa0874770 MtrunA17_Chr4g0052081 41.429 70 40 1 1 70 1 69 1.51e-12 64.3
Msa0874770 MtrunA17_Chr4g0060841 50.943 53 26 0 1 53 1 53 1.57e-12 66.2
Msa0874770 MtrunA17_Chr7g0246401 34.307 137 73 5 122 250 2 129 1.46e-11 60.5
Msa0874770 MtrunA17_Chr8g0356071 45.614 57 31 0 1 57 1 57 1.75e-11 60.8
Msa0874770 MtrunA17_Chr1g0206691 48.333 60 30 1 11 70 1 59 2.99e-11 61.2
Msa0874770 MtrunA17_Chr1g0187351 48.333 60 30 1 11 70 1 59 5.40e-11 57.4
Msa0874770 MtrunA17_Chr3g0111841 51.786 56 26 1 8 63 2 56 7.87e-11 56.6
Msa0874770 MtrunA17_Chr5g0427961 31.818 110 75 0 62 171 5 114 8.75e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0874770 AT3G02310.1 73.228 254 60 4 1 250 1 250 1.62e-133 377
Msa0874770 AT5G15800.1 74.609 256 54 5 1 250 1 251 1.80e-125 356
Msa0874770 AT5G15800.2 73.004 263 57 5 1 250 1 262 2.29e-125 357
Msa0874770 AT3G02310.2 82.486 177 30 1 1 176 1 177 3.41e-102 295
Msa0874770 AT1G24260.1 62.257 257 75 4 1 249 1 243 3.37e-101 295
Msa0874770 AT1G24260.2 62.016 258 75 4 1 249 1 244 5.33e-101 294
Msa0874770 AT1G24260.3 61.265 253 71 3 1 249 1 230 1.19e-94 278
Msa0874770 AT2G03710.1 54.406 261 105 3 1 250 1 258 1.05e-93 276
Msa0874770 AT2G03710.2 54.406 261 104 4 1 250 1 257 5.92e-92 271
Msa0874770 AT2G03710.3 68.023 172 54 1 1 171 1 172 5.43e-81 241
Msa0874770 AT2G45650.1 49.027 257 119 7 1 250 1 252 5.59e-72 221
Msa0874770 AT1G69120.2 52.299 174 82 1 1 173 1 174 3.94e-58 185
Msa0874770 AT1G69120.1 52.299 174 82 1 1 173 1 174 2.61e-57 183
Msa0874770 AT5G60910.1 42.231 251 128 5 1 250 1 235 6.91e-57 182
Msa0874770 AT1G26310.1 53.409 176 79 1 1 173 1 176 9.83e-57 182
Msa0874770 AT3G61120.1 44.643 224 95 3 1 224 1 195 1.02e-53 174
Msa0874770 AT4G09960.6 44.886 176 93 3 1 174 2 175 8.92e-47 155
Msa0874770 AT4G09960.1 44.886 176 93 3 1 174 1 174 9.87e-47 155
Msa0874770 AT4G09960.5 44.886 176 93 3 1 174 11 184 1.43e-46 155
Msa0874770 AT4G09960.3 44.886 176 93 3 1 174 27 200 3.98e-46 155
Msa0874770 AT3G30260.1 51.299 154 70 2 1 151 1 152 1.92e-45 152
Msa0874770 AT2G45660.1 48.837 172 84 3 1 170 1 170 2.75e-45 151
Msa0874770 AT3G58780.5 47.159 176 87 4 1 173 22 194 9.69e-45 151
Msa0874770 AT3G58780.1 47.159 176 87 4 1 173 16 188 9.89e-45 151
Msa0874770 AT2G42830.1 47.727 176 86 4 1 173 16 188 3.33e-44 149
Msa0874770 AT4G09960.4 42.781 187 91 5 1 185 96 268 5.80e-44 151
Msa0874770 AT4G18960.1 46.409 181 90 4 2 180 18 193 1.22e-43 148
Msa0874770 AT4G11880.2 51.282 156 76 0 1 156 1 156 2.09e-43 145
Msa0874770 AT4G11880.3 51.282 156 76 0 1 156 1 156 2.09e-43 145
Msa0874770 AT4G09960.2 49.306 144 69 3 1 142 1 142 2.13e-43 146
Msa0874770 AT2G45660.2 49.367 158 76 3 1 156 1 156 4.04e-43 144
Msa0874770 AT4G22950.2 47.093 172 90 1 1 172 1 171 4.64e-43 144
Msa0874770 AT4G37940.1 36.596 235 137 5 1 230 1 228 7.13e-43 145
Msa0874770 AT2G42830.2 49.057 159 75 4 1 156 16 171 1.29e-42 145
Msa0874770 AT3G58780.2 46.023 176 82 4 1 173 16 181 1.90e-42 145
Msa0874770 AT4G22950.3 47.647 170 88 1 1 170 1 169 2.67e-42 144
Msa0874770 AT4G22950.1 47.647 170 88 1 1 170 1 169 2.67e-42 144
Msa0874770 AT4G11880.4 50.000 172 86 0 1 172 1 172 3.94e-42 143
Msa0874770 AT4G11880.1 50.000 172 86 0 1 172 1 172 3.94e-42 143
Msa0874770 AT3G58780.4 51.333 150 67 4 1 147 16 162 4.03e-41 142
Msa0874770 AT3G58780.3 42.000 200 87 4 1 173 16 213 5.17e-41 142
Msa0874770 AT5G62165.3 46.199 171 90 2 1 170 1 170 8.41e-41 139
Msa0874770 AT5G62165.1 46.199 171 90 2 1 170 1 170 8.41e-41 139
Msa0874770 AT5G62165.2 46.199 171 90 2 1 170 1 170 8.41e-41 139
Msa0874770 AT3G57230.1 43.275 171 96 1 1 171 1 170 1.18e-40 140
Msa0874770 AT3G57230.4 43.275 171 96 1 1 171 1 170 1.18e-40 140
Msa0874770 AT2G22630.1 38.500 200 113 2 1 200 1 190 4.22e-39 135
Msa0874770 AT2G22630.2 38.500 200 113 2 1 200 1 190 4.22e-39 135
Msa0874770 AT3G57230.2 48.252 143 73 1 1 143 1 142 1.04e-38 132
Msa0874770 AT5G62165.17 46.497 157 82 2 1 156 1 156 1.48e-38 132
Msa0874770 AT5G62165.12 46.497 157 82 2 1 156 1 156 1.48e-38 132
Msa0874770 AT5G62165.11 46.497 157 82 2 1 156 1 156 1.48e-38 132
Msa0874770 AT4G37940.4 40.625 192 112 2 1 192 1 190 2.33e-38 133
Msa0874770 AT2G14210.2 39.899 198 114 1 1 193 1 198 5.45e-38 133
Msa0874770 AT2G14210.1 39.899 198 114 1 1 193 1 198 5.48e-38 133
Msa0874770 AT5G51870.1 42.458 179 97 3 1 177 1 175 1.68e-37 131
Msa0874770 AT5G62165.6 46.259 147 77 2 1 146 1 146 1.24e-36 127
Msa0874770 AT5G62165.9 46.259 147 77 2 1 146 1 146 1.24e-36 127
Msa0874770 AT5G62165.7 46.259 147 77 2 1 146 1 146 1.24e-36 127
Msa0874770 AT5G62165.8 46.259 147 77 2 1 146 1 146 1.24e-36 127
Msa0874770 AT5G62165.13 46.259 147 77 2 1 146 1 146 1.24e-36 127
Msa0874770 AT5G62165.10 45.223 157 84 2 1 156 1 156 1.85e-36 128
Msa0874770 AT5G62165.4 45.223 157 84 2 1 156 1 156 1.85e-36 128
Msa0874770 AT4G37940.3 46.479 142 75 1 1 142 1 141 2.13e-36 127
Msa0874770 AT5G51870.4 42.938 177 95 3 1 175 1 173 9.64e-36 127
Msa0874770 AT5G51870.3 42.938 177 95 3 1 175 11 183 1.29e-35 127
Msa0874770 AT5G13790.2 40.807 223 121 6 1 218 1 217 2.82e-35 127
Msa0874770 AT5G13790.1 40.359 223 119 5 1 218 1 214 5.82e-35 126
Msa0874770 AT3G57390.3 43.333 180 93 2 1 172 1 179 5.90e-35 125
Msa0874770 AT5G51860.2 40.571 175 101 2 1 173 1 174 7.26e-35 124
Msa0874770 AT3G57390.1 43.333 180 93 2 1 172 1 179 1.01e-34 125
Msa0874770 AT2G22540.3 40.476 168 98 2 1 167 1 167 2.07e-34 124
Msa0874770 AT2G22540.1 40.476 168 98 2 1 167 1 167 2.07e-34 124
Msa0874770 AT5G51860.1 40.698 172 99 2 1 170 1 171 2.36e-34 123
Msa0874770 AT5G23260.2 37.264 212 120 4 1 211 1 200 5.73e-34 123
Msa0874770 AT5G20240.1 41.111 180 85 5 1 173 1 166 7.71e-34 121
Msa0874770 AT5G23260.4 37.264 212 120 4 1 211 17 216 9.19e-34 123
Msa0874770 AT1G71692.1 40.107 187 96 2 1 175 1 183 9.89e-34 121
Msa0874770 AT5G65050.2 41.071 168 92 2 1 168 1 161 1.53e-33 120
Msa0874770 AT5G10140.4 40.230 174 89 3 1 168 1 165 3.36e-33 119
Msa0874770 AT5G51870.2 44.521 146 78 2 1 144 1 145 3.79e-33 119
Msa0874770 AT5G65050.3 41.071 168 92 2 1 168 1 161 4.05e-33 119
Msa0874770 AT5G51870.5 44.521 146 78 2 1 144 24 168 1.36e-32 118
Msa0874770 AT5G65060.3 39.881 168 94 3 1 168 1 161 2.42e-32 117
Msa0874770 AT5G65050.5 39.881 168 83 2 1 168 1 150 4.05e-32 116
Msa0874770 AT5G65060.1 39.881 168 94 3 1 168 1 161 4.34e-32 117
Msa0874770 AT5G10140.1 42.953 149 74 2 1 147 1 140 4.98e-32 116
Msa0874770 AT5G10140.2 42.953 149 74 2 1 147 1 140 5.01e-32 115
Msa0874770 AT5G20240.2 46.575 146 61 4 1 139 1 136 7.24e-32 114
Msa0874770 AT5G10140.3 42.953 149 74 2 1 147 1 140 8.41e-32 115
Msa0874770 AT5G65050.1 39.535 172 93 3 1 168 1 165 1.89e-31 114
Msa0874770 AT4G24540.1 42.135 178 95 3 1 174 1 174 2.88e-31 115
Msa0874770 AT5G23260.1 36.792 212 116 5 1 211 17 211 9.70e-31 115
Msa0874770 AT5G65070.1 42.197 173 89 3 1 171 1 164 1.04e-30 113
Msa0874770 AT5G65060.2 38.690 168 85 3 1 168 1 150 1.14e-30 112
Msa0874770 AT5G62165.14 70.833 72 20 1 1 72 1 71 5.91e-30 108
Msa0874770 AT5G65080.3 41.401 157 83 3 1 156 8 156 1.65e-29 110
Msa0874770 AT5G23260.3 41.497 147 83 2 1 146 1 145 5.68e-29 110
Msa0874770 AT2G22540.2 36.905 168 99 2 1 167 1 162 1.05e-28 109
Msa0874770 AT5G65070.2 37.374 198 94 4 1 171 1 195 1.36e-27 106
Msa0874770 AT3G54340.1 37.572 173 103 2 1 172 1 169 3.36e-27 105
Msa0874770 AT1G31140.2 42.308 156 73 3 1 146 1 149 4.09e-26 101
Msa0874770 AT1G31140.1 40.816 147 86 1 1 146 1 147 6.01e-26 101
Msa0874770 AT5G65080.2 34.722 216 122 4 1 216 8 204 8.78e-26 100
Msa0874770 AT1G77080.5 38.728 173 99 2 1 173 1 166 1.96e-25 99.0
Msa0874770 AT1G77080.11 37.640 178 104 2 1 178 1 171 3.43e-25 98.2
Msa0874770 AT5G65070.4 42.282 149 75 3 1 147 1 140 3.67e-25 97.4
Msa0874770 AT1G77080.4 38.012 171 99 2 1 171 1 164 9.12e-25 97.8
Msa0874770 AT5G65070.5 36.612 183 86 4 1 156 1 180 3.50e-24 96.7
Msa0874770 AT5G65070.3 33.824 204 94 4 1 171 1 196 1.71e-23 95.5
Msa0874770 AT1G77080.8 33.333 195 102 3 1 171 1 191 7.06e-22 90.9
Msa0874770 AT1G22130.1 48.889 90 37 1 1 90 1 81 1.43e-20 89.4
Msa0874770 AT1G77080.2 36.842 171 97 3 1 171 1 160 1.53e-20 86.7
Msa0874770 AT1G77980.1 54.054 74 34 0 1 74 1 74 5.75e-20 87.8
Msa0874770 AT1G69120.3 40.179 112 66 1 63 173 1 112 1.27e-19 84.0
Msa0874770 AT5G60910.2 31.217 189 113 4 63 250 1 173 3.84e-18 79.7
Msa0874770 AT1G77080.12 37.179 156 87 3 1 156 1 145 5.86e-18 78.6
Msa0874770 AT1G77950.3 45.556 90 40 1 1 90 1 81 2.20e-17 79.3
Msa0874770 AT1G77950.2 45.556 90 40 1 1 90 1 81 2.20e-17 79.3
Msa0874770 AT1G77950.1 45.556 90 40 1 1 90 1 81 2.20e-17 79.3
Msa0874770 AT1G77950.4 45.556 90 40 1 1 90 1 81 2.20e-17 79.3
Msa0874770 AT1G65360.1 35.593 118 61 3 1 109 6 117 1.94e-16 76.3
Msa0874770 AT1G01530.1 35.484 155 88 4 1 154 6 149 1.99e-16 76.6
Msa0874770 AT4G37435.1 59.649 57 23 0 1 57 1 57 2.64e-16 75.1
Msa0874770 AT4G36590.1 41.379 87 50 1 2 88 7 92 1.28e-14 71.6
Msa0874770 AT2G03060.3 36.190 105 58 2 1 104 1 97 1.54e-14 72.8
Msa0874770 AT2G03060.7 36.190 105 58 2 1 104 1 97 1.54e-14 72.8
Msa0874770 AT2G03060.1 36.190 105 58 2 1 104 1 97 1.54e-14 72.8
Msa0874770 AT2G03060.2 36.190 105 58 2 1 104 1 97 2.00e-14 72.4
Msa0874770 AT5G60440.1 34.286 140 71 4 2 139 7 127 2.09e-14 71.6
Msa0874770 AT1G18750.4 52.632 57 27 0 1 57 1 57 3.49e-14 71.6
Msa0874770 AT1G18750.1 52.632 57 27 0 1 57 1 57 3.71e-14 71.6
Msa0874770 AT1G18750.3 52.632 57 27 0 1 57 1 57 4.46e-14 71.6
Msa0874770 AT3G04100.1 45.205 73 39 1 2 74 14 85 4.70e-14 69.3
Msa0874770 AT2G24840.1 47.143 70 36 1 1 70 62 130 4.89e-14 70.1
Msa0874770 AT1G72350.1 47.826 69 33 1 2 70 43 108 3.89e-13 67.0
Msa0874770 AT1G69540.1 29.703 202 113 7 1 173 1 202 5.23e-13 68.2
Msa0874770 AT1G69540.2 27.228 202 118 4 1 173 1 202 6.33e-13 67.8
Msa0874770 AT2G34440.1 38.889 72 43 1 1 72 1 71 1.26e-12 64.7
Msa0874770 AT3G66656.1 40.845 71 41 1 1 71 1 70 2.17e-12 64.3
Msa0874770 AT1G29962.1 46.377 69 36 1 2 70 8 75 7.85e-12 62.8
Msa0874770 AT4G37940.2 26.590 173 116 4 63 230 1 167 1.40e-11 61.6
Msa0874770 AT1G47760.1 35.714 112 62 3 1 111 1 103 1.72e-11 62.0
Msa0874770 AT1G28460.1 44.928 69 37 1 2 70 8 75 4.03e-11 60.8

Find 50 sgRNAs with CRISPR-Local

Find 180 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTTTGCCTATACTGGTTTC+TGG 0.169304 6_1:-10618756 None:intergenic
CTTCCCATGTTTGCCTATAC+TGG 0.207949 6_1:-10618763 None:intergenic
CTTAATTGCAGAAACCTTCT+AGG 0.228646 6_1:+10617600 Msa0874770:intron
CTCATAAAGCTTGCCTCTAT+TGG 0.248430 6_1:-10615294 None:intergenic
ACTCAAGCTCAACAAGTTAA+TGG 0.276163 6_1:+10619455 Msa0874770:CDS
CTGCACCATAGCTGCACTTT+TGG 0.300781 6_1:-10617072 None:intergenic
ACAAAGCTTCTTTCAGCCTT+TGG 0.302611 6_1:+10618829 Msa0874770:CDS
CTTGATACAGGACTGATTAC+AGG 0.316120 6_1:+10619393 Msa0874770:intron
ATTAGCTGATCTTCAAAATA+AGG 0.323444 6_1:+10618367 Msa0874770:CDS
CAAGTTAATGGATTTATTCC+TGG 0.326103 6_1:+10619467 Msa0874770:CDS
TTCAAGCTGCTCAAGATCTT+TGG 0.326567 6_1:-10617646 None:intergenic
TTTATATACCTCAAGCTCTT+TGG 0.339567 6_1:-10617113 None:intergenic
CTAATTGGTCCAGCATGAAT+TGG 0.369438 6_1:-10618349 None:intergenic
ATTCTTCTCTCAAGCAAGTC+AGG 0.393982 6_1:+10617679 Msa0874770:CDS
CTTATTATCTTCTCCAATAG+AGG 0.396704 6_1:+10615281 Msa0874770:CDS
GCATGCTCAAAACGCTTGAT+AGG 0.415680 6_1:+10617047 Msa0874770:intron
GACCTAAGTCTTCACCTAGA+AGG 0.417033 6_1:-10617614 None:intergenic
ACATTTGCAAAGAGAAGAAA+TGG 0.424187 6_1:+10615206 Msa0874770:CDS
GGTGAAGACTTAGGTCCATT+AGG 0.427895 6_1:+10617621 Msa0874770:CDS
GGAAGCTGGTGATCAAAGTA+TGG 0.434521 6_1:+10618781 Msa0874770:CDS
TCAAGATCTTTGGTACCTAA+TGG 0.441434 6_1:-10617636 None:intergenic
TATTACCCTATCTGCAATGT+TGG 0.448140 6_1:-10618860 None:intergenic
AAACAGATCTTTGTCTATGA+AGG 0.464986 6_1:+10618488 Msa0874770:CDS
TGCAATCCAACATTGCAGAT+AGG 0.474506 6_1:+10618854 Msa0874770:CDS
GTTAGCTGATCTGATGCTAC+TGG 0.476275 6_1:-10619425 None:intergenic
GAGGAAGAGTGGAATTGAAA+AGG 0.478417 6_1:+10615156 Msa0874770:CDS
TATACCTCAAGCTCTTTGGC+AGG 0.482984 6_1:-10617109 None:intergenic
GCAATCCAACATTGCAGATA+GGG 0.488188 6_1:+10618855 Msa0874770:CDS
TATAGGCAAACATGGGAAGC+TGG 0.508553 6_1:+10618767 Msa0874770:CDS
TAATTGGTCCAGCATGAATT+GGG 0.508602 6_1:-10618348 None:intergenic
TCAATTCCAGAAACCAGTAT+AGG 0.510896 6_1:+10618750 Msa0874770:CDS
CAAGATTTGAATCTCTTCAA+AGG 0.513932 6_1:+10617482 Msa0874770:CDS
AGGTACCAAAAGTGCAGCTA+TGG 0.519687 6_1:+10617067 Msa0874770:CDS
GGTGATCAAAGTATGGCATA+TGG 0.522384 6_1:+10618788 Msa0874770:CDS
GAAAATGGGAAGAGGAAGAG+TGG 0.539131 6_1:+10615145 None:intergenic
TTAATGGATTTATTCCTGGA+TGG 0.541666 6_1:+10619471 Msa0874770:CDS
AATCTCTTCAAAGGACTCAA+AGG 0.546223 6_1:+10617491 Msa0874770:CDS
TTGAAGTTGAAAATGGGAAG+AGG 0.556816 6_1:+10615137 None:intergenic
TTTGCAGACCCAATTCATGC+TGG 0.559190 6_1:+10618340 Msa0874770:intron
CTTTCAGCTTCAAGTACTCA+CGG 0.561889 6_1:-10617459 None:intergenic
GAAACCAGTATAGGCAAACA+TGG 0.575578 6_1:+10618759 Msa0874770:CDS
TTAGCTCAAAGCATCCATCC+AGG 0.582969 6_1:-10619485 None:intergenic
GCTTGAGAGAAGAATCAAGT+TGG 0.598020 6_1:-10617671 None:intergenic
CAAACCTGCCAAAGAGCTTG+AGG 0.604710 6_1:+10617105 Msa0874770:CDS
AATGTTGGATTGCACTCCAA+AGG 0.620049 6_1:-10618845 None:intergenic
AACCTTCTAGGTGAAGACTT+AGG 0.623261 6_1:+10617612 Msa0874770:CDS
AGCTGATCTGATGCTACTGG+AGG 0.648548 6_1:-10619422 None:intergenic
GTGTACATAGGAGCATATGT+TGG 0.664737 6_1:+10618458 Msa0874770:intron
AAACCAGTATAGGCAAACAT+GGG 0.689634 6_1:+10618760 Msa0874770:CDS
CAAGCAAGTCAGGTCCACCA+AGG 0.698134 6_1:+10617689 Msa0874770:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTTTGATTTTTTTTTTTTTT+TGG + chr6_1:10615448-10615467 Msa0874770:intron 10.0%
!! AAATTGAGAAATTTATTTAT+TGG - chr6_1:10615966-10615985 None:intergenic 10.0%
!!! AAATTTCTCAATTTTTTTTA+AGG + chr6_1:10615972-10615991 Msa0874770:intron 10.0%
!!! AATTTCTCAATTTTTTTTAA+GGG + chr6_1:10615973-10615992 Msa0874770:intron 10.0%
!! TAAATAAAATTAAGATAATG+AGG - chr6_1:10616859-10616878 None:intergenic 10.0%
!!! ATAGATTCAATATATTTTAT+AGG - chr6_1:10619346-10619365 None:intergenic 10.0%
!!! GGTTTAAGAAATTATTATTT+TGG + chr6_1:10615530-10615549 Msa0874770:intron 15.0%
!!! TTTATTTTAATTTTCTGTGT+TGG + chr6_1:10615569-10615588 Msa0874770:intron 15.0%
!!! TTTCTTTTTTTTTTTCTTGA+AGG + chr6_1:10615764-10615783 Msa0874770:intron 15.0%
!! ACATATATTCAAATAAATCA+AGG + chr6_1:10615912-10615931 Msa0874770:intron 15.0%
!! GATATAGAAATACAAATATT+AGG - chr6_1:10616121-10616140 None:intergenic 15.0%
!! AAATTTCATTGAAAACAAAA+GGG - chr6_1:10616234-10616253 None:intergenic 15.0%
!! GAAAAAAGAAAAAAAAGAAA+TGG + chr6_1:10616646-10616665 Msa0874770:intron 15.0%
!!! ATTGACAAATTTTTTTTCTA+GGG - chr6_1:10616692-10616711 None:intergenic 15.0%
!! TAGAAAAAAAATTTGTCAAT+GGG + chr6_1:10616692-10616711 Msa0874770:intron 15.0%
!!! GCTATAAAACATTTAAAATA+TGG + chr6_1:10617369-10617388 Msa0874770:intron 15.0%
!!! ATGAAATATTTTATTCAAGA+AGG - chr6_1:10617881-10617900 None:intergenic 15.0%
!! TCAATTCATAAGAAAAATAA+TGG - chr6_1:10618536-10618555 None:intergenic 15.0%
!! AAAAAAAAAAAAATTGTTGC+TGG + chr6_1:10618992-10619011 Msa0874770:intron 15.0%
!! ACAAATCAATAACAAATTTA+GGG - chr6_1:10619020-10619039 None:intergenic 15.0%
!! TACAAATCAATAACAAATTT+AGG - chr6_1:10619021-10619040 None:intergenic 15.0%
!!! TTTGTTATTGATTTGTAATT+AGG + chr6_1:10619024-10619043 Msa0874770:intron 15.0%
!! AAATATCTTTGCATTTAGAT+AGG + chr6_1:10616033-10616052 Msa0874770:intron 20.0%
!! TGAAGAGAAAAAAATAACTT+TGG - chr6_1:10616171-10616190 None:intergenic 20.0%
!! GAAATTTCATTGAAAACAAA+AGG - chr6_1:10616235-10616254 None:intergenic 20.0%
!!! CATTGACAAATTTTTTTTCT+AGG - chr6_1:10616693-10616712 None:intergenic 20.0%
!! CTAGAAAAAAAATTTGTCAA+TGG + chr6_1:10616691-10616710 Msa0874770:intron 20.0%
!! ATTAAACAAATACATCATGT+TGG - chr6_1:10616786-10616805 None:intergenic 20.0%
!! AATTTGCAATCAAGAAATTA+AGG + chr6_1:10616803-10616822 Msa0874770:intron 20.0%
!!! ATTGTTATTCATGAATTGAT+TGG + chr6_1:10616999-10617018 Msa0874770:intron 20.0%
!! TTATCATGTGTATATTAAAG+GGG - chr6_1:10617262-10617281 None:intergenic 20.0%
!! CTTATCATGTGTATATTAAA+GGG - chr6_1:10617263-10617282 None:intergenic 20.0%
!! ACTTATCATGTGTATATTAA+AGG - chr6_1:10617264-10617283 None:intergenic 20.0%
!! GTAATAATAAGCTATTCATA+AGG - chr6_1:10618022-10618041 None:intergenic 20.0%
!!! AAAAATGGATTATATGTGTT+AGG - chr6_1:10618438-10618457 None:intergenic 20.0%
!! ATGAATTGATTAAATGTAAC+TGG + chr6_1:10618547-10618566 Msa0874770:intron 20.0%
!!! ATTACTATTTTGTTTAAAGC+TGG + chr6_1:10618715-10618734 Msa0874770:intron 20.0%
!! CAAATCAATAACAAATTTAG+GGG - chr6_1:10619019-10619038 None:intergenic 20.0%
! TAAGAATAAGAAACATACCT+AGG - chr6_1:10615332-10615351 None:intergenic 25.0%
!! TTGGTATTATTTGAGGTTAA+TGG + chr6_1:10615588-10615607 Msa0874770:intron 25.0%
! TATTTATTGGTACTAAACTC+AGG - chr6_1:10615953-10615972 None:intergenic 25.0%
! CTATATCTCTAATTTCTGTT+TGG + chr6_1:10616134-10616153 Msa0874770:intron 25.0%
! ATGACTGAAAACTATCATAT+AGG - chr6_1:10616421-10616440 None:intergenic 25.0%
! AGGAAAAAGAACAAAAAGTA+AGG - chr6_1:10616449-10616468 None:intergenic 25.0%
! CTGAATTGGGATATATTTAA+TGG + chr6_1:10616550-10616569 Msa0874770:intron 25.0%
! TGTTAGAGCTAAAATGAAAA+AGG + chr6_1:10616623-10616642 Msa0874770:intron 25.0%
! GTTAGAGCTAAAATGAAAAA+GGG + chr6_1:10616624-10616643 Msa0874770:intron 25.0%
! CAATATATATCCCTACATTT+AGG - chr6_1:10616761-10616780 None:intergenic 25.0%
! CTAAATGTAGGGATATATAT+TGG + chr6_1:10616759-10616778 Msa0874770:intron 25.0%
!! TTTAGCATTTTCTTGTGATT+TGG + chr6_1:10616947-10616966 Msa0874770:intron 25.0%
!! TCACATTTTACTGAAACTTA+GGG - chr6_1:10617908-10617927 None:intergenic 25.0%
!! TTCACATTTTACTGAAACTT+AGG - chr6_1:10617909-10617928 None:intergenic 25.0%
!!! CACAGTTTTGATCTTAAAAA+TGG + chr6_1:10617949-10617968 Msa0874770:intron 25.0%
! TTGTCAAAAGTTTCTCATTT+AGG + chr6_1:10618136-10618155 Msa0874770:intron 25.0%
! TTGTCAAAAGTTTCTCAATT+AGG - chr6_1:10618191-10618210 None:intergenic 25.0%
! TGATGATATCTGACATTATA+TGG + chr6_1:10618309-10618328 Msa0874770:intron 25.0%
!!! TATTTTGAAGATCAGCTAAT+TGG - chr6_1:10618367-10618386 None:intergenic 25.0%
! ATTAGCTGATCTTCAAAATA+AGG + chr6_1:10618367-10618386 Msa0874770:CDS 25.0%
!!! TAATCCATTTTTGTGTACAT+AGG + chr6_1:10618446-10618465 Msa0874770:intron 25.0%
! TCATAAGAAAAATAATGGCA+TGG - chr6_1:10618531-10618550 None:intergenic 25.0%
! AGTCTTTATATTGTAAGAGT+AGG - chr6_1:10618629-10618648 None:intergenic 25.0%
! AGCAACAACAGAAAATAAAA+TGG - chr6_1:10618895-10618914 None:intergenic 25.0%
! ATTAGGTTTAATTACTCTCT+AGG + chr6_1:10618928-10618947 Msa0874770:intron 25.0%
ACATTTGCAAAGAGAAGAAA+TGG + chr6_1:10615206-10615225 Msa0874770:CDS 30.0%
CTTATTATCTTCTCCAATAG+AGG + chr6_1:10615281-10615300 Msa0874770:CDS 30.0%
! ATTTGAAGCTTGATTCTACT+TGG + chr6_1:10615500-10615519 Msa0874770:intron 30.0%
TTGATTCTACTTGGATTTGT+TGG + chr6_1:10615509-10615528 Msa0874770:intron 30.0%
! TTCTGTGTTGGTATTATTTG+AGG + chr6_1:10615581-10615600 Msa0874770:intron 30.0%
TGAAGTTATAGTACATGATC+TGG + chr6_1:10615623-10615642 Msa0874770:intron 30.0%
GTACATGATCTGGTAAATAT+TGG + chr6_1:10615633-10615652 Msa0874770:intron 30.0%
ATATGTAAATCTAGTACTGC+TGG - chr6_1:10615898-10615917 None:intergenic 30.0%
TTGCATTTAGATAGGACTTA+AGG + chr6_1:10616041-10616060 Msa0874770:intron 30.0%
TGTGTTAGAAACTCCAAAAT+TGG + chr6_1:10616093-10616112 Msa0874770:intron 30.0%
! CAAATATTAGGCTCCAATTT+TGG - chr6_1:10616109-10616128 None:intergenic 30.0%
TTTCATTGAAAACAAAAGGG+AGG - chr6_1:10616231-10616250 None:intergenic 30.0%
TACTCATTCTGTCATATTGA+AGG + chr6_1:10616476-10616495 Msa0874770:intron 30.0%
ACACATATATGTGCTGAATT+GGG + chr6_1:10616537-10616556 Msa0874770:intron 30.0%
TTTATATACCTCAAGCTCTT+TGG - chr6_1:10617116-10617135 None:intergenic 30.0%
GTAGTATATGATAAGCACTT+AGG - chr6_1:10617220-10617239 None:intergenic 30.0%
AGAGATGTTGAAAAAATACG+CGG - chr6_1:10617320-10617339 None:intergenic 30.0%
CAAGATTTGAATCTCTTCAA+AGG + chr6_1:10617482-10617501 Msa0874770:CDS 30.0%
!! AGAGATGGATTTTTATACCT+TGG - chr6_1:10617709-10617728 None:intergenic 30.0%
GATATGACGAAATTTAGAGA+CGG - chr6_1:10617783-10617802 None:intergenic 30.0%
ACTTCAGACTAGGAAATATT+AGG - chr6_1:10617996-10618015 None:intergenic 30.0%
GTAAGAACAAACCACTAAAT+TGG - chr6_1:10618283-10618302 None:intergenic 30.0%
GATCTTCAAAATAAGGTACA+TGG + chr6_1:10618374-10618393 Msa0874770:intron 30.0%
AAACAGATCTTTGTCTATGA+AGG + chr6_1:10618488-10618507 Msa0874770:CDS 30.0%
AAAAATAATGGCATGGATGA+TGG - chr6_1:10618524-10618543 None:intergenic 30.0%
CAAGGACTTAATTAATGTGA+AGG - chr6_1:10618678-10618697 None:intergenic 30.0%
TTAATGAAATCATCAGCACA+AGG - chr6_1:10618696-10618715 None:intergenic 30.0%
!! TGCTAAAGCTGATTTGAATT+AGG + chr6_1:10618911-10618930 Msa0874770:intron 30.0%
!! CAAGTTAATGGATTTATTCC+TGG + chr6_1:10619467-10619486 Msa0874770:CDS 30.0%
!! TTAATGGATTTATTCCTGGA+TGG + chr6_1:10619471-10619490 Msa0874770:CDS 30.0%
GACAGAATGAGTATCATAAC+AGG - chr6_1:10616469-10616488 None:intergenic 35.0%
CACACATATATGTGCTGAAT+TGG + chr6_1:10616536-10616555 Msa0874770:intron 35.0%
ATAACCATGCTCCTAAATGT+AGG + chr6_1:10616747-10616766 Msa0874770:intron 35.0%
TAACCATGCTCCTAAATGTA+GGG + chr6_1:10616748-10616767 Msa0874770:intron 35.0%
!! TGCTGATTCAAGGAAAACAA+AGG - chr6_1:10617030-10617049 None:intergenic 35.0%
ATTAAAGGGGCTTATAACCA+GGG - chr6_1:10617249-10617268 None:intergenic 35.0%
TATTAAAGGGGCTTATAACC+AGG - chr6_1:10617250-10617269 None:intergenic 35.0%
AATCTCTTCAAAGGACTCAA+AGG + chr6_1:10617491-10617510 Msa0874770:CDS 35.0%
CTAGAAGGTTTCTGCAATTA+AGG - chr6_1:10617602-10617621 None:intergenic 35.0%
CTTAATTGCAGAAACCTTCT+AGG + chr6_1:10617600-10617619 Msa0874770:intron 35.0%
TCAAGATCTTTGGTACCTAA+TGG - chr6_1:10617639-10617658 None:intergenic 35.0%
!! GATGGATTTTTATACCTTGG+TGG - chr6_1:10617706-10617725 None:intergenic 35.0%
GTTAACGACGTAATTAGAGA+TGG - chr6_1:10617724-10617743 None:intergenic 35.0%
TAGAGACGGAAACATAAAAC+TGG - chr6_1:10617769-10617788 None:intergenic 35.0%
CATAAGGAAAACTTCAGACT+AGG - chr6_1:10618006-10618025 None:intergenic 35.0%
!! ATGTTTTTGTCACATGACGA+GGG - chr6_1:10618163-10618182 None:intergenic 35.0%
!! TATGTTTTTGTCACATGACG+AGG - chr6_1:10618164-10618183 None:intergenic 35.0%
TAATTGGTCCAGCATGAATT+GGG - chr6_1:10618351-10618370 None:intergenic 35.0%
TGCTCCTATGTACACAAAAA+TGG - chr6_1:10618453-10618472 None:intergenic 35.0%
TCAATTCCAGAAACCAGTAT+AGG + chr6_1:10618750-10618769 Msa0874770:CDS 35.0%
AAACCAGTATAGGCAAACAT+GGG + chr6_1:10618760-10618779 Msa0874770:CDS 35.0%
TATTACCCTATCTGCAATGT+TGG - chr6_1:10618863-10618882 None:intergenic 35.0%
ACCTACTTATAGTGCATGTT+TGG + chr6_1:10619172-10619191 Msa0874770:intron 35.0%
TCCAAACATGCACTATAAGT+AGG - chr6_1:10619176-10619195 None:intergenic 35.0%
CGATAAGTTAGCCAAAATCA+CGG - chr6_1:10619280-10619299 None:intergenic 35.0%
!!! CGTGATTTTGGCTAACTTAT+CGG + chr6_1:10619278-10619297 Msa0874770:intron 35.0%
ACTCAAGCTCAACAAGTTAA+TGG + chr6_1:10619455-10619474 Msa0874770:CDS 35.0%
GAGGAAGAGTGGAATTGAAA+AGG + chr6_1:10615156-10615175 Msa0874770:CDS 40.0%
CTCATAAAGCTTGCCTCTAT+TGG - chr6_1:10615297-10615316 None:intergenic 40.0%
!! ATGAGTTTTGTAGCAGTCCT+AGG + chr6_1:10615312-10615331 Msa0874770:CDS 40.0%
GGGTAAAGAGGTAGCATATT+AGG - chr6_1:10616202-10616221 None:intergenic 40.0%
ATTGAAAACAAAAGGGAGGC+CGG - chr6_1:10616227-10616246 None:intergenic 40.0%
AAAGAAATGGCCTCACAACA+TGG + chr6_1:10616659-10616678 Msa0874770:intron 40.0%
GGGTTAAATTCCATGTTGTG+AGG - chr6_1:10616672-10616691 None:intergenic 40.0%
TATCCCTACATTTAGGAGCA+TGG - chr6_1:10616754-10616773 None:intergenic 40.0%
!!! GTTTTGAGCATGCTGATTCA+AGG - chr6_1:10617040-10617059 None:intergenic 40.0%
CTTTCAGCTTCAAGTACTCA+CGG - chr6_1:10617462-10617481 None:intergenic 40.0%
AACCTTCTAGGTGAAGACTT+AGG + chr6_1:10617612-10617631 Msa0874770:CDS 40.0%
TTCAAGCTGCTCAAGATCTT+TGG - chr6_1:10617649-10617668 None:intergenic 40.0%
GCTTGAGAGAAGAATCAAGT+TGG - chr6_1:10617674-10617693 None:intergenic 40.0%
ATTCTTCTCTCAAGCAAGTC+AGG + chr6_1:10617679-10617698 Msa0874770:CDS 40.0%
CTGAGAATGACCTACAAAGA+CGG + chr6_1:10618254-10618273 Msa0874770:intron 40.0%
TGAGAATGACCTACAAAGAC+GGG + chr6_1:10618255-10618274 Msa0874770:intron 40.0%
CTAATTGGTCCAGCATGAAT+TGG - chr6_1:10618352-10618371 None:intergenic 40.0%
! GTGTACATAGGAGCATATGT+TGG + chr6_1:10618458-10618477 Msa0874770:intron 40.0%
!! TGTTTGCCTATACTGGTTTC+TGG - chr6_1:10618759-10618778 None:intergenic 40.0%
GAAACCAGTATAGGCAAACA+TGG + chr6_1:10618759-10618778 Msa0874770:CDS 40.0%
GGTGATCAAAGTATGGCATA+TGG + chr6_1:10618788-10618807 Msa0874770:CDS 40.0%
ACAAAGCTTCTTTCAGCCTT+TGG + chr6_1:10618829-10618848 Msa0874770:CDS 40.0%
AATGTTGGATTGCACTCCAA+AGG - chr6_1:10618848-10618867 None:intergenic 40.0%
TGCAATCCAACATTGCAGAT+AGG + chr6_1:10618854-10618873 Msa0874770:CDS 40.0%
GCAATCCAACATTGCAGATA+GGG + chr6_1:10618855-10618874 Msa0874770:CDS 40.0%
AAGCCATTGTTCCTTGATAC+AGG + chr6_1:10619381-10619400 Msa0874770:intron 40.0%
AGTCCTGTATCAAGGAACAA+TGG - chr6_1:10619387-10619406 None:intergenic 40.0%
CTGTAATCAGTCCTGTATCA+AGG - chr6_1:10619395-10619414 None:intergenic 40.0%
CTTGATACAGGACTGATTAC+AGG + chr6_1:10619393-10619412 Msa0874770:intron 40.0%
TTGAAAACAAAAGGGAGGCC+GGG - chr6_1:10616226-10616245 None:intergenic 45.0%
GCATGCTCAAAACGCTTGAT+AGG + chr6_1:10617047-10617066 Msa0874770:intron 45.0%
! AGGTACCAAAAGTGCAGCTA+TGG + chr6_1:10617067-10617086 Msa0874770:CDS 45.0%
TATACCTCAAGCTCTTTGGC+AGG - chr6_1:10617112-10617131 None:intergenic 45.0%
TCATATACTACCTTCGTCCC+TGG + chr6_1:10617229-10617248 Msa0874770:intron 45.0%
GACCTAAGTCTTCACCTAGA+AGG - chr6_1:10617617-10617636 None:intergenic 45.0%
GGTGAAGACTTAGGTCCATT+AGG + chr6_1:10617621-10617640 Msa0874770:CDS 45.0%
GAGAATGACCTACAAAGACG+GGG + chr6_1:10618256-10618275 Msa0874770:intron 45.0%
AAATTGGTCCCCGTCTTTGT+AGG - chr6_1:10618267-10618286 None:intergenic 45.0%
AAAGACGGGGACCAATTTAG+TGG + chr6_1:10618269-10618288 Msa0874770:intron 45.0%
TTTGCAGACCCAATTCATGC+TGG + chr6_1:10618340-10618359 Msa0874770:intron 45.0%
CTTCCCATGTTTGCCTATAC+TGG - chr6_1:10618766-10618785 None:intergenic 45.0%
TATAGGCAAACATGGGAAGC+TGG + chr6_1:10618767-10618786 Msa0874770:CDS 45.0%
GGAAGCTGGTGATCAAAGTA+TGG + chr6_1:10618781-10618800 Msa0874770:CDS 45.0%
! ACAGTGACTCACCGTGATTT+TGG + chr6_1:10619266-10619285 Msa0874770:intron 45.0%
GTTAGCTGATCTGATGCTAC+TGG - chr6_1:10619428-10619447 None:intergenic 45.0%
!!! TTTTAATATATTTTTTTTTG+TGG + chr6_1:10615383-10615402 Msa0874770:intron 5.0%
!!! TAAAAAATTTAAAATAGTTT+AGG - chr6_1:10618955-10618974 None:intergenic 5.0%
!!! CTATTTTAAATTTTTTAAAT+AGG + chr6_1:10618958-10618977 Msa0874770:intron 5.0%
!!! TCAAATTATTTAAAATTTTA+AGG + chr6_1:10619149-10619168 Msa0874770:intron 5.0%
TGAAAACAAAAGGGAGGCCG+GGG - chr6_1:10616225-10616244 None:intergenic 50.0%
! CTGCACCATAGCTGCACTTT+TGG - chr6_1:10617075-10617094 None:intergenic 50.0%
CAAACCTGCCAAAGAGCTTG+AGG + chr6_1:10617105-10617124 Msa0874770:CDS 50.0%
AGCTGATCTGATGCTACTGG+AGG - chr6_1:10619425-10619444 None:intergenic 50.0%
ATGCTACCTCTTTACCCCCC+CGG + chr6_1:10616205-10616224 Msa0874770:intron 55.0%
AAAACAAAAGGGAGGCCGGG+GGG - chr6_1:10616223-10616242 None:intergenic 55.0%
GAAAACAAAAGGGAGGCCGG+GGG - chr6_1:10616224-10616243 None:intergenic 55.0%
GGGCTTATAACCAGGGACGA+AGG - chr6_1:10617242-10617261 None:intergenic 55.0%
CAAGCAAGTCAGGTCCACCA+AGG + chr6_1:10617689-10617708 Msa0874770:CDS 55.0%
AAACAAAAGGGAGGCCGGGG+GGG - chr6_1:10616222-10616241 None:intergenic 60.0%
GGGAGGCCGGGGGGGTAAAG+AGG - chr6_1:10616214-10616233 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 10615149 10619502 10615149 ID=Msa0874770;Name=Msa0874770
chr6_1 mRNA 10615149 10619502 10615149 ID=Msa0874770-mRNA-1;Parent=Msa0874770;Name=Msa0874770-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0|1|1|1|8|0|250
chr6_1 exon 10615149 10615333 10615149 ID=Msa0874770-mRNA-1:exon:3293;Parent=Msa0874770-mRNA-1
chr6_1 exon 10617048 10617126 10617048 ID=Msa0874770-mRNA-1:exon:3294;Parent=Msa0874770-mRNA-1
chr6_1 exon 10617451 10617512 10617451 ID=Msa0874770-mRNA-1:exon:3295;Parent=Msa0874770-mRNA-1
chr6_1 exon 10617611 10617710 10617611 ID=Msa0874770-mRNA-1:exon:3296;Parent=Msa0874770-mRNA-1
chr6_1 exon 10618347 10618388 10618347 ID=Msa0874770-mRNA-1:exon:3297;Parent=Msa0874770-mRNA-1
chr6_1 exon 10618468 10618509 10618468 ID=Msa0874770-mRNA-1:exon:3298;Parent=Msa0874770-mRNA-1
chr6_1 exon 10618734 10618876 10618734 ID=Msa0874770-mRNA-1:exon:3299;Parent=Msa0874770-mRNA-1
chr6_1 exon 10619403 10619502 10619403 ID=Msa0874770-mRNA-1:exon:3300;Parent=Msa0874770-mRNA-1
chr6_1 CDS 10615149 10615333 10615149 ID=Msa0874770-mRNA-1:cds;Parent=Msa0874770-mRNA-1
chr6_1 CDS 10617048 10617126 10617048 ID=Msa0874770-mRNA-1:cds;Parent=Msa0874770-mRNA-1
chr6_1 CDS 10617451 10617512 10617451 ID=Msa0874770-mRNA-1:cds;Parent=Msa0874770-mRNA-1
chr6_1 CDS 10617611 10617710 10617611 ID=Msa0874770-mRNA-1:cds;Parent=Msa0874770-mRNA-1
chr6_1 CDS 10618347 10618388 10618347 ID=Msa0874770-mRNA-1:cds;Parent=Msa0874770-mRNA-1
chr6_1 CDS 10618468 10618509 10618468 ID=Msa0874770-mRNA-1:cds;Parent=Msa0874770-mRNA-1
chr6_1 CDS 10618734 10618876 10618734 ID=Msa0874770-mRNA-1:cds;Parent=Msa0874770-mRNA-1
chr6_1 CDS 10619403 10619502 10619403 ID=Msa0874770-mRNA-1:cds;Parent=Msa0874770-mRNA-1
Gene Sequence

>Msa0874770

ATGGGAAGAGGAAGAGTGGAATTGAAAAGGATAGAGAATAAGATAAACAGACAAGTAACATTTGCAAAGAGAAGAAATGGACTTCTTAAGAAAGCTTATGAATTATCTGTTCTTTGTGATGCTGAAGTTGCTCTTATTATCTTCTCCAATAGAGGCAAGCTTTATGAGTTTTGTAGCAGTCCTAGCATGCTCAAAACGCTTGATAGGTACCAAAAGTGCAGCTATGGTGCAGTAGAAGTTAACAAACCTGCCAAAGAGCTTGAGAGCAGTTACCGTGAGTACTTGAAGCTGAAAGCAAGATTTGAATCTCTTCAAAGGACTCAAAGAAACCTTCTAGGTGAAGACTTAGGTCCATTAGGTACCAAAGATCTTGAGCAGCTTGAACGCCAACTTGATTCTTCTCTCAAGCAAGTCAGGTCCACCAAGACCCAATTCATGCTGGACCAATTAGCTGATCTTCAAAATAAGGAGCATATGTTGGTAGAAGCAAACAGATCTTTGTCTATGAAGCTGGAAGAAATCAATATCAATTCCAGAAACCAGTATAGGCAAACATGGGAAGCTGGTGATCAAAGTATGGCATATGGTAATCAAAATGCTCATTCACAAAGCTTCTTTCAGCCTTTGGAGTGCAATCCAACATTGCAGATAGGGACTGATTACAGGTACAGTCCTCCAGTAGCATCAGATCAGCTAACTGCAACAACTCAAGCTCAACAAGTTAATGGATTTATTCCTGGATGGATGCTTTGA
Protein sequence

>Msa0874770

MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSPSMLKTLDRYQKCSYGAVEVNKPAKELESSYREYLKLKARFESLQRTQRNLLGEDLGPLGTKDLEQLERQLDSSLKQVRSTKTQFMLDQLADLQNKEHMLVEANRSLSMKLEEININSRNQYRQTWEAGDQSMAYGNQNAHSQSFFQPLECNPTLQIGTDYRYSPPVASDQLTATTQAQQVNGFIPGWML*