Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0881950 | XP_039684203.1 | 90.083 | 484 | 16 | 5 | 1 | 453 | 1 | 483 | 0.0 | 867 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0881950 | sp|Q6M9M7|Y1998_PARUW | 30.698 | 430 | 211 | 8 | 45 | 452 | 9 | 373 | 5.49e-60 | 203 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0121800 | Msa0881950 | 0.805037 | 1.619372e-49 | -8.615850e-47 |
| Msa0171920 | Msa0881950 | 0.812846 | 3.452417e-51 | -8.615850e-47 |
| Msa0881950 | Msa1013600 | 0.961374 | 1.255449e-119 | -8.615850e-47 |
| Msa0881950 | Msa1054920 | 0.850829 | 1.318597e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0881950 | MtrunA17_Chr7g0225601 | 90.062 | 483 | 16 | 5 | 1 | 452 | 35 | 516 | 0.0 | 866 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0881950 | AT3G27180.1 | 64.989 | 457 | 125 | 5 | 28 | 451 | 25 | 479 | 0.0 | 608 |
Find 114 sgRNAs with CRISPR-Local
Find 498 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTAATCTCAATGCATTTAA+TGG | 0.135696 | 6_1:+30387346 | None:intergenic |
| GCTAATTTCTTTCGGAAATA+TGG | 0.169448 | 6_1:-30393605 | Msa0881950:CDS |
| CACATTTGATACTTGCAATT+TGG | 0.187117 | 6_1:-30393570 | Msa0881950:intron |
| TTCTCTTCTTGTACTGAGTT+TGG | 0.197023 | 6_1:+30386775 | None:intergenic |
| ATCCACAACTTATATAAATA+AGG | 0.205657 | 6_1:+30386662 | None:intergenic |
| TCTCTTCTTGTACTGAGTTT+GGG | 0.220318 | 6_1:+30386776 | None:intergenic |
| GTCAAGTAAGGCATGGTATT+TGG | 0.226824 | 6_1:-30386515 | Msa0881950:CDS |
| TTGATTGATTGCAGTTTCTA+TGG | 0.247836 | 6_1:-30388972 | Msa0881950:intron |
| TATGCTGGAGCTGGGGTCAT+TGG | 0.261380 | 6_1:-30387495 | Msa0881950:CDS |
| TCATTGGCCCCATCCAGTTT+TGG | 0.301498 | 6_1:-30388326 | Msa0881950:CDS |
| CAGGTGATTTGCTTCTAATC+TGG | 0.327795 | 6_1:+30386716 | None:intergenic |
| GCAGCATCTTCAACTATTAC+AGG | 0.333970 | 6_1:+30393626 | None:intergenic |
| GCTGATTTGTATGCTGGAGC+TGG | 0.336966 | 6_1:-30387504 | Msa0881950:CDS |
| GAGCCCACAAGCCACGAAAT+AGG | 0.361925 | 6_1:+30386997 | None:intergenic |
| TGTGTTTGCTTGGCCAAAAC+TGG | 0.366055 | 6_1:+30388313 | None:intergenic |
| AAGATGCTGCTAATTTCTTT+CGG | 0.369678 | 6_1:-30393613 | Msa0881950:CDS |
| TCCACAGCAGCATTAATATT+AGG | 0.374930 | 6_1:+30389607 | None:intergenic |
| TCCACAACTTATATAAATAA+GGG | 0.386192 | 6_1:+30386663 | None:intergenic |
| ATGCTGGAGCTGGGGTCATT+GGG | 0.387886 | 6_1:-30387494 | Msa0881950:CDS |
| AATAGATGGAGACATCTTCT+TGG | 0.392843 | 6_1:-30388389 | Msa0881950:CDS |
| GTGCCTTCATCTTCAAGATA+TGG | 0.397055 | 6_1:+30389454 | None:intergenic |
| AGGATGGGTGGTGGCATGAC+AGG | 0.397158 | 6_1:+30393843 | None:intergenic |
| ATATGTTTCAGGTAAGGTTC+AGG | 0.398072 | 6_1:-30389155 | Msa0881950:intron |
| AAAATGGTGGGCCACGGAGC+GGG | 0.402394 | 6_1:-30388948 | Msa0881950:CDS |
| AGGTTCAGGTTACATTGGTT+TGG | 0.403600 | 6_1:-30389141 | Msa0881950:CDS |
| CGGCAATTTGCGATATGTTC+AGG | 0.409927 | 6_1:-30389431 | Msa0881950:intron |
| GGGTGTGGAGTTGAAGAAAT+GGG | 0.416537 | 6_1:+30393796 | None:intergenic |
| CTGATTTGTATGCTGGAGCT+GGG | 0.419298 | 6_1:-30387503 | Msa0881950:CDS |
| CAAGTCATTGTTGTCAAGTA+AGG | 0.426435 | 6_1:-30386527 | Msa0881950:CDS |
| ATTGAAGAATATATCATTAG+TGG | 0.434826 | 6_1:-30386917 | Msa0881950:CDS |
| GGATCCTATTTCGTGGCTTG+TGG | 0.436784 | 6_1:-30387001 | Msa0881950:CDS |
| GATCCTATTTCGTGGCTTGT+GGG | 0.437671 | 6_1:-30387000 | Msa0881950:CDS |
| CAATGAAGTGCGCATGTTAG+TGG | 0.440403 | 6_1:+30393769 | None:intergenic |
| TCTGTTGCTGATTTGTATGC+TGG | 0.442617 | 6_1:-30387510 | Msa0881950:CDS |
| GGAAATTACCTTTGAGTACC+AGG | 0.442889 | 6_1:+30386466 | None:intergenic |
| ATGCTGCTGTGGAGCTCCTT+AGG | 0.444837 | 6_1:-30389597 | Msa0881950:CDS |
| GGGGTGTGGAGTTGAAGAAA+TGG | 0.445494 | 6_1:+30393795 | None:intergenic |
| TGGAGATTTGAGGAGGAGGA+TGG | 0.448977 | 6_1:+30393827 | None:intergenic |
| CTCTTCTTGTACTGAGTTTG+GGG | 0.453895 | 6_1:+30386777 | None:intergenic |
| CTTTCGGAAATATGGTGTTA+CGG | 0.462687 | 6_1:-30393597 | Msa0881950:CDS |
| ACCCTTATTTATATAAGTTG+TGG | 0.473397 | 6_1:-30386664 | Msa0881950:CDS |
| GGTGTGGAGTTGAAGAAATG+GGG | 0.475365 | 6_1:+30393797 | None:intergenic |
| GGGGTTGCTGTGGAGATTTG+AGG | 0.475539 | 6_1:+30393817 | None:intergenic |
| TTTATCAGTAGTCTGAAAGT+TGG | 0.477230 | 6_1:+30388900 | None:intergenic |
| CTTATATAAATAAGGGTTTG+TGG | 0.481739 | 6_1:+30386670 | None:intergenic |
| TCAGCAACAGATGATTCATA+TGG | 0.483452 | 6_1:+30387522 | None:intergenic |
| AACTTCAAACCTTTGCACTC+TGG | 0.485980 | 6_1:+30392268 | None:intergenic |
| GTGTGGAGTTGAAGAAATGG+GGG | 0.497069 | 6_1:+30393798 | None:intergenic |
| GGAGATTTGAGGAGGAGGAT+GGG | 0.499243 | 6_1:+30393828 | None:intergenic |
| GTCATCGATCCTCCTAGAAA+AGG | 0.499991 | 6_1:-30386964 | Msa0881950:CDS |
| CTGAACATATCGCAAATTGC+CGG | 0.501956 | 6_1:+30389432 | None:intergenic |
| CACAACACGTCTCTTCCCGC+TGG | 0.504538 | 6_1:-30389294 | Msa0881950:CDS |
| TTATTTATATAAGTTGTGGA+TGG | 0.505687 | 6_1:-30386660 | Msa0881950:CDS |
| TTGAGGAGGAGGATGGGTGG+TGG | 0.505924 | 6_1:+30393834 | None:intergenic |
| CTCATATATCTTTCCCCAGC+GGG | 0.507701 | 6_1:+30389279 | None:intergenic |
| TATTTATATAAGTTGTGGAT+GGG | 0.511854 | 6_1:-30386659 | Msa0881950:CDS |
| TTTGCTTGGCCAAAACTGGA+TGG | 0.513184 | 6_1:+30388317 | None:intergenic |
| TTCATTTAATTCATTCAGTG+TGG | 0.514198 | 6_1:-30388924 | Msa0881950:CDS |
| CAGGTGAAGCGGTGGAAGGA+TGG | 0.514498 | 6_1:+30393862 | None:intergenic |
| ACAACACGTCTCTTCCCGCT+GGG | 0.515537 | 6_1:-30389293 | Msa0881950:CDS |
| AGTGCGCATGTTAGTGGAGG+GGG | 0.521660 | 6_1:+30393775 | None:intergenic |
| TGGTGGAATTGATGTCTCAT+TGG | 0.528317 | 6_1:-30388342 | Msa0881950:CDS |
| CAACTATTACAGGACGATGA+AGG | 0.529115 | 6_1:+30393636 | None:intergenic |
| AAAATATAATACCTCGCCTA+AGG | 0.531862 | 6_1:+30389581 | None:intergenic |
| TTGCTTGGCCAAAACTGGAT+GGG | 0.534469 | 6_1:+30388318 | None:intergenic |
| AAGCGGTGGAAGGATGGCGG+TGG | 0.538276 | 6_1:+30393868 | None:intergenic |
| ATGCTGCTGTCAACAGTGGC+AGG | 0.540971 | 6_1:+30387281 | None:intergenic |
| ATTCAGTTTGTCTGAACCAT+GGG | 0.544352 | 6_1:+30389099 | None:intergenic |
| TCATTTAATTCATTCAGTGT+GGG | 0.548044 | 6_1:-30388923 | Msa0881950:CDS |
| ATTTCTTTCCTGGTACTCAA+AGG | 0.552260 | 6_1:-30386474 | Msa0881950:CDS |
| TGCTTGGCCAAAACTGGATG+GGG | 0.553152 | 6_1:+30388319 | None:intergenic |
| GCTGTGGAGATTTGAGGAGG+AGG | 0.554254 | 6_1:+30393823 | None:intergenic |
| GATTTGAGGAGGAGGATGGG+TGG | 0.556246 | 6_1:+30393831 | None:intergenic |
| TCCTAATATTAATGCTGCTG+TGG | 0.557970 | 6_1:-30389608 | Msa0881950:CDS |
| TGGTGGCATGACAGGTGAAG+CGG | 0.561788 | 6_1:+30393851 | None:intergenic |
| TGAGGCAAACATTACTCCAC+TGG | 0.566686 | 6_1:-30386695 | Msa0881950:CDS |
| CTTCTTGTACTGAGTTTGGG+GGG | 0.567019 | 6_1:+30386779 | None:intergenic |
| ATGGCGGTGGTGAGACGAGT+CGG | 0.567935 | 6_1:+30393881 | None:intergenic |
| AGTGGAGTAATGTTTGCCTC+AGG | 0.569139 | 6_1:+30386697 | None:intergenic |
| GAACCATATCTTGAAGATGA+AGG | 0.572934 | 6_1:-30389457 | Msa0881950:CDS |
| GTTGCTGTGGAGATTTGAGG+AGG | 0.573111 | 6_1:+30393820 | None:intergenic |
| TCAAGAAATGAAAATTCCCA+TGG | 0.576230 | 6_1:-30389115 | Msa0881950:CDS |
| CATTCAGTTTGTCTGAACCA+TGG | 0.577148 | 6_1:+30389098 | None:intergenic |
| AGGTAAGGTTCAGGTTACAT+TGG | 0.580408 | 6_1:-30389146 | Msa0881950:CDS |
| GAAGTGCGCATGTTAGTGGA+GGG | 0.589547 | 6_1:+30393773 | None:intergenic |
| AGTAACAGGATCCTATTTCG+TGG | 0.590289 | 6_1:-30387008 | Msa0881950:intron |
| ATAAGGGTTTGTGGCACCAG+TGG | 0.597852 | 6_1:+30386679 | None:intergenic |
| TGAGATTAACAAAGAGTCGA+AGG | 0.598999 | 6_1:-30387333 | Msa0881950:CDS |
| GTGAAGCGGTGGAAGGATGG+CGG | 0.602827 | 6_1:+30393865 | None:intergenic |
| TCTTCTTGTACTGAGTTTGG+GGG | 0.611772 | 6_1:+30386778 | None:intergenic |
| TTCAGACAAACTGAATGCAC+TGG | 0.613114 | 6_1:-30389092 | Msa0881950:CDS |
| TGAAGTGCGCATGTTAGTGG+AGG | 0.615319 | 6_1:+30393772 | None:intergenic |
| TATCTTGAAGATGAAGGCAC+CGG | 0.616306 | 6_1:-30389451 | Msa0881950:CDS |
| TTTCTGTAACTTCTGCAGCA+AGG | 0.616649 | 6_1:+30387551 | None:intergenic |
| CTGTTGACAGCAGCATCACA+TGG | 0.619353 | 6_1:-30387274 | Msa0881950:CDS |
| CATTGTTGTCAAGTAAGGCA+TGG | 0.620509 | 6_1:-30386522 | Msa0881950:CDS |
| TCATTAGCACGTAAAACCCA+TGG | 0.622253 | 6_1:+30386748 | None:intergenic |
| ATGACAGGTGAAGCGGTGGA+AGG | 0.624064 | 6_1:+30393858 | None:intergenic |
| ATCGACATTCCAGAGTGCAA+AGG | 0.626643 | 6_1:-30392277 | Msa0881950:intron |
| TGATTTGTATGCTGGAGCTG+GGG | 0.634386 | 6_1:-30387502 | Msa0881950:CDS |
| TTGCCTGCACTTTCTTGTCG+CGG | 0.637545 | 6_1:+30387461 | None:intergenic |
| AAGCTTTGTCGTCATCAGAA+CGG | 0.638359 | 6_1:-30386888 | Msa0881950:intron |
| ACAAGAAGAGAAAAGACCAT+GGG | 0.640470 | 6_1:-30386764 | Msa0881950:CDS |
| TGGCATGACAGGTGAAGCGG+TGG | 0.653409 | 6_1:+30393854 | None:intergenic |
| GTGCGCATGTTAGTGGAGGG+GGG | 0.666144 | 6_1:+30393776 | None:intergenic |
| TACAAGAAGAGAAAAGACCA+TGG | 0.671417 | 6_1:-30386765 | Msa0881950:CDS |
| CAACACGTCTCTTCCCGCTG+GGG | 0.677453 | 6_1:-30389292 | Msa0881950:CDS |
| GCTGTGGAGCTCCTTAGGCG+AGG | 0.686020 | 6_1:-30389592 | Msa0881950:intron |
| ATTAAATGAAGCCCGCTCCG+TGG | 0.688253 | 6_1:+30388937 | None:intergenic |
| AAGTGCGCATGTTAGTGGAG+GGG | 0.695481 | 6_1:+30393774 | None:intergenic |
| TGTGATGCTGCTGTCAACAG+TGG | 0.702617 | 6_1:+30387277 | None:intergenic |
| GATTAGAAGCAAATCACCTG+AGG | 0.709183 | 6_1:-30386713 | Msa0881950:CDS |
| GCTGGGGAAAGATATATGAG+TGG | 0.725333 | 6_1:-30389276 | Msa0881950:intron |
| ACTCATATATCTTTCCCCAG+CGG | 0.754269 | 6_1:+30389278 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACTTTTTTATTATTGATTTT+AGG | - | chr6_1:30386675-30386694 | Msa0881950:CDS | 10.0% |
| !! | TAGAAAAAAAAATGTTAAAA+AGG | + | chr6_1:30386864-30386883 | None:intergenic | 10.0% |
| !!! | AAAATGGATTTTTTATATTT+TGG | - | chr6_1:30390498-30390517 | Msa0881950:intron | 10.0% |
| !! | TAAAAATATAATAAACATAC+AGG | + | chr6_1:30390814-30390833 | None:intergenic | 10.0% |
| !! | AGAATTAGTTAAAATTAACA+AGG | + | chr6_1:30386830-30386849 | None:intergenic | 15.0% |
| !! | AAACAAAAAAAGAAGTAATT+GGG | + | chr6_1:30387021-30387040 | None:intergenic | 15.0% |
| !! | TAAACAAAAAAAGAAGTAAT+TGG | + | chr6_1:30387022-30387041 | None:intergenic | 15.0% |
| !! | ATTAATAACGTTTATAATTG+CGG | + | chr6_1:30387631-30387650 | None:intergenic | 15.0% |
| !!! | TATTTTACTATTCTATGTTT+TGG | - | chr6_1:30388218-30388237 | Msa0881950:intron | 15.0% |
| !!! | ATATATCTATTTTTTGTCAT+TGG | - | chr6_1:30389687-30389706 | Msa0881950:intron | 15.0% |
| !!! | TAAATGTTTTTGAATTATTG+AGG | - | chr6_1:30389957-30389976 | Msa0881950:intron | 15.0% |
| !!! | AAATGTTTTTGAATTATTGA+GGG | - | chr6_1:30389958-30389977 | Msa0881950:intron | 15.0% |
| !!! | ACATATTTTTTTCACTAATA+TGG | - | chr6_1:30390593-30390612 | Msa0881950:intron | 15.0% |
| !! | GATATAAAATTATATGTTTC+AGG | - | chr6_1:30391194-30391213 | Msa0881950:intron | 15.0% |
| !!! | TTTAAAATTATTGAACCAAA+AGG | - | chr6_1:30392625-30392644 | Msa0881950:intron | 15.0% |
| !! | TTAAAATTATTGAACCAAAA+GGG | - | chr6_1:30392626-30392645 | Msa0881950:intron | 15.0% |
| !! | TTTCATATTAAATTAAAGCA+TGG | + | chr6_1:30393168-30393187 | None:intergenic | 15.0% |
| !!! | ACATCTTAAATTTTTGTATA+CGG | - | chr6_1:30393217-30393236 | Msa0881950:intron | 15.0% |
| !!! | TATTATTGATTTTAGGTGTT+CGG | - | chr6_1:30386682-30386701 | Msa0881950:CDS | 20.0% |
| !!! | ATTAACTTATTTCAAGTATG+TGG | - | chr6_1:30387522-30387541 | Msa0881950:CDS | 20.0% |
| !! | CGTTATTAATCATAATGTTT+AGG | - | chr6_1:30387641-30387660 | Msa0881950:intron | 20.0% |
| !! | GAGAGTTACAAAATATAATA+AGG | + | chr6_1:30387841-30387860 | None:intergenic | 20.0% |
| !! | ATTCTAACATATATACCAAA+GGG | + | chr6_1:30388138-30388157 | None:intergenic | 20.0% |
| !! | TATTCTAACATATATACCAA+AGG | + | chr6_1:30388139-30388158 | None:intergenic | 20.0% |
| !! | TAGTAAAATACAGACTAAAA+TGG | + | chr6_1:30388208-30388227 | None:intergenic | 20.0% |
| !!! | TAAATTTTAAAACACTGCAT+TGG | + | chr6_1:30388426-30388445 | None:intergenic | 20.0% |
| !! | AATTTAAGAACAACTGAAAA+CGG | - | chr6_1:30388440-30388459 | Msa0881950:intron | 20.0% |
| !!! | ACTCTTAGATATTTTGTATT+GGG | + | chr6_1:30389137-30389156 | None:intergenic | 20.0% |
| !!! | GTTTTTTAATTAACATCTTG+TGG | - | chr6_1:30389224-30389243 | Msa0881950:intron | 20.0% |
| !!! | CAGTATAAGCTATTTTATTT+TGG | - | chr6_1:30389876-30389895 | Msa0881950:intron | 20.0% |
| !!! | TATTTTATTTTGGAGAAAAC+TGG | - | chr6_1:30389886-30389905 | Msa0881950:intron | 20.0% |
| !! | TGATACAAAATAGTAAAAAG+AGG | + | chr6_1:30389922-30389941 | None:intergenic | 20.0% |
| !! | TTGTATCATTAAGATCAAAA+TGG | - | chr6_1:30389934-30389953 | Msa0881950:intron | 20.0% |
| !! | TTGAATGATTAATCTGAAAA+TGG | - | chr6_1:30390482-30390501 | Msa0881950:intron | 20.0% |
| !!! | ATTTTTTTCACTAATATGGA+TGG | - | chr6_1:30390597-30390616 | Msa0881950:intron | 20.0% |
| !!! | TAATGATTGAGTTTTGAATT+CGG | - | chr6_1:30390996-30391015 | Msa0881950:intron | 20.0% |
| !! | AATTATGTGGAAAAATGTAT+TGG | - | chr6_1:30391130-30391149 | Msa0881950:intron | 20.0% |
| !!! | GGATATTTTCATATAGTTAA+TGG | - | chr6_1:30391151-30391170 | Msa0881950:intron | 20.0% |
| !!! | AAAATTATATGTTTCAGGTA+AGG | - | chr6_1:30391199-30391218 | Msa0881950:intron | 20.0% |
| !! | GTTCTAATGAAACTAATTAA+TGG | - | chr6_1:30391499-30391518 | Msa0881950:intron | 20.0% |
| !! | TCAATGATATCTTATGAAAT+GGG | - | chr6_1:30391700-30391719 | Msa0881950:intron | 20.0% |
| !!! | ATAATTGTTTCTACCAAAAA+AGG | - | chr6_1:30391901-30391920 | Msa0881950:intron | 20.0% |
| !!! | GTTCAATAATTTTAAAACTC+AGG | + | chr6_1:30392621-30392640 | None:intergenic | 20.0% |
| !!! | TTAAATTTTTGTATACGGAA+CGG | - | chr6_1:30393222-30393241 | Msa0881950:intron | 20.0% |
| !! | ATTGAAGAATATATCATTAG+TGG | - | chr6_1:30393443-30393462 | Msa0881950:intron | 20.0% |
| !! | TCCACAACTTATATAAATAA+GGG | + | chr6_1:30393700-30393719 | None:intergenic | 20.0% |
| !! | ATCCACAACTTATATAAATA+AGG | + | chr6_1:30393701-30393720 | None:intergenic | 20.0% |
| !! | TTATTTATATAAGTTGTGGA+TGG | - | chr6_1:30393700-30393719 | Msa0881950:intron | 20.0% |
| !! | TATTTATATAAGTTGTGGAT+GGG | - | chr6_1:30393701-30393720 | Msa0881950:intron | 20.0% |
| ! | ATTCACAAGTGAAAAGAATT+GGG | + | chr6_1:30386646-30386665 | None:intergenic | 25.0% |
| ! | AATTCACAAGTGAAAAGAAT+TGG | + | chr6_1:30386647-30386666 | None:intergenic | 25.0% |
| !!! | ATTATTGATTTTAGGTGTTC+GGG | - | chr6_1:30386683-30386702 | Msa0881950:CDS | 25.0% |
| !!! | TTTAGCTTTTTAGTAGTAGA+CGG | - | chr6_1:30387162-30387181 | Msa0881950:intron | 25.0% |
| !!! | TCCTATATTTTTTACGATAG+TGG | - | chr6_1:30387315-30387334 | Msa0881950:CDS | 25.0% |
| ! | ACCACTATCGTAAAAAATAT+AGG | + | chr6_1:30387319-30387338 | None:intergenic | 25.0% |
| ! | GAGAACAAAATTCAACAATT+TGG | - | chr6_1:30387496-30387515 | Msa0881950:CDS | 25.0% |
| ! | GTTAATACTTAATGTGACAT+GGG | - | chr6_1:30387569-30387588 | Msa0881950:intron | 25.0% |
| ! | TTAATACTTAATGTGACATG+GGG | - | chr6_1:30387570-30387589 | Msa0881950:intron | 25.0% |
| ! | GGTTAATTACATTCAATAGA+TGG | + | chr6_1:30387610-30387629 | None:intergenic | 25.0% |
| ! | AAATTCAACAACGATTTAGA+TGG | + | chr6_1:30387902-30387921 | None:intergenic | 25.0% |
| !!! | ATTTATGTTTTTAGTCCCTT+TGG | - | chr6_1:30388120-30388139 | Msa0881950:intron | 25.0% |
| !!! | TTCCAAAATTCACCATTTTT+TGG | + | chr6_1:30388544-30388563 | None:intergenic | 25.0% |
| ! | TGCTCTTAACTTTACTTTAA+GGG | + | chr6_1:30388569-30388588 | None:intergenic | 25.0% |
| ! | GTGAGAATAATTTCTTTGAA+TGG | + | chr6_1:30388751-30388770 | None:intergenic | 25.0% |
| ! | ACTTTAATCAAGAACAACAA+CGG | + | chr6_1:30388827-30388846 | None:intergenic | 25.0% |
| !! | TTGTGATAGATTGCATTTTA+GGG | + | chr6_1:30388872-30388891 | None:intergenic | 25.0% |
| ! | AACATTTCAACAAGTATTTG+TGG | - | chr6_1:30388916-30388935 | Msa0881950:CDS | 25.0% |
| ! | ACATTTCAACAAGTATTTGT+GGG | - | chr6_1:30388917-30388936 | Msa0881950:CDS | 25.0% |
| !! | GACTCTTAGATATTTTGTAT+TGG | + | chr6_1:30389138-30389157 | None:intergenic | 25.0% |
| ! | TATTTAAACAAGTCCTAATG+AGG | + | chr6_1:30389285-30389304 | None:intergenic | 25.0% |
| !! | CTTTCTTTTGTAGCATTAAT+AGG | - | chr6_1:30389555-30389574 | Msa0881950:intron | 25.0% |
| ! | CATATATCTAGAAAAACAAG+GGG | + | chr6_1:30389820-30389839 | None:intergenic | 25.0% |
| ! | CCATATATCTAGAAAAACAA+GGG | + | chr6_1:30389821-30389840 | None:intergenic | 25.0% |
| ! | ACCATATATCTAGAAAAACA+AGG | + | chr6_1:30389822-30389841 | None:intergenic | 25.0% |
| ! | AAACTGAATGAATCATAAGA+AGG | - | chr6_1:30390146-30390165 | Msa0881950:intron | 25.0% |
| ! | ACTCACAATTTAGAGAAAAA+TGG | - | chr6_1:30390187-30390206 | Msa0881950:intron | 25.0% |
| ! | TCAAGATTGTAAAAGTAATC+GGG | + | chr6_1:30390279-30390298 | None:intergenic | 25.0% |
| ! | GTCAAGATTGTAAAAGTAAT+CGG | + | chr6_1:30390280-30390299 | None:intergenic | 25.0% |
| ! | AAATGATCTTGTATAAGATC+TGG | - | chr6_1:30390318-30390337 | Msa0881950:intron | 25.0% |
| ! | GATAGAAATTCACAAGATAA+CGG | - | chr6_1:30390449-30390468 | Msa0881950:intron | 25.0% |
| ! | ATAGAAATTCACAAGATAAC+GGG | - | chr6_1:30390450-30390469 | Msa0881950:intron | 25.0% |
| !!! | TTAATTTGTTCCAAACACTA+TGG | - | chr6_1:30390644-30390663 | Msa0881950:intron | 25.0% |
| ! | ATAGAAAAATCCATAGTGTT+TGG | + | chr6_1:30390657-30390676 | None:intergenic | 25.0% |
| !!! | ATCTAGGCATTTTATTTCTT+AGG | + | chr6_1:30390964-30390983 | None:intergenic | 25.0% |
| !!! | AATGATTGAGTTTTGAATTC+GGG | - | chr6_1:30390997-30391016 | Msa0881950:intron | 25.0% |
| !! | CTTTTCATCCTAAAAAGTAA+TGG | - | chr6_1:30391360-30391379 | Msa0881950:intron | 25.0% |
| !!! | CAAATGAACCATTACTTTTT+AGG | + | chr6_1:30391371-30391390 | None:intergenic | 25.0% |
| ! | TTCATTTAATTCATTCAGTG+TGG | - | chr6_1:30391436-30391455 | Msa0881950:intron | 25.0% |
| ! | TCATTTAATTCATTCAGTGT+GGG | - | chr6_1:30391437-30391456 | Msa0881950:intron | 25.0% |
| ! | TAATGAAACTAATTAATGGC+TGG | - | chr6_1:30391503-30391522 | Msa0881950:intron | 25.0% |
| ! | TGGCTGGTATTTAATTAAAA+TGG | - | chr6_1:30391519-30391538 | Msa0881950:intron | 25.0% |
| ! | TTTGAATACAAATCATATCG+AGG | - | chr6_1:30391625-30391644 | Msa0881950:intron | 25.0% |
| ! | CTTTAAATTTATGTCATGGA+TGG | - | chr6_1:30391648-30391667 | Msa0881950:intron | 25.0% |
| ! | GTCAATGATATCTTATGAAA+TGG | - | chr6_1:30391699-30391718 | Msa0881950:intron | 25.0% |
| ! | CAATGATATCTTATGAAATG+GGG | - | chr6_1:30391701-30391720 | Msa0881950:intron | 25.0% |
| ! | AATGATATCTTATGAAATGG+GGG | - | chr6_1:30391702-30391721 | Msa0881950:intron | 25.0% |
| ! | AATGCATATATCATGTTTCA+GGG | + | chr6_1:30391784-30391803 | None:intergenic | 25.0% |
| ! | AAATGCATATATCATGTTTC+AGG | + | chr6_1:30391785-30391804 | None:intergenic | 25.0% |
| !!! | AGATAATTTTTGGGAATAGA+TGG | - | chr6_1:30391957-30391976 | Msa0881950:intron | 25.0% |
| ! | TGTCATGTAAATAGCAAAAT+TGG | - | chr6_1:30392194-30392213 | Msa0881950:intron | 25.0% |
| !! | ATTACTGACTAGAAAAGAAA+AGG | - | chr6_1:30392229-30392248 | Msa0881950:intron | 25.0% |
| !!! | ATTTAGTAAGTTAGTTTTGC+TGG | + | chr6_1:30392416-30392435 | None:intergenic | 25.0% |
| ! | TTATCAATAAACCAAACCAA+AGG | + | chr6_1:30392512-30392531 | None:intergenic | 25.0% |
| !!! | TGATAAATTGCCTTTGAAAT+TGG | - | chr6_1:30392526-30392545 | Msa0881950:intron | 25.0% |
| ! | GTTAATCTCAATGCATTTAA+TGG | + | chr6_1:30393017-30393036 | None:intergenic | 25.0% |
| ! | CAATTTGAAAATATTTCCCT+CGG | - | chr6_1:30393526-30393545 | Msa0881950:intron | 25.0% |
| ! | CTTATATAAATAAGGGTTTG+TGG | + | chr6_1:30393693-30393712 | None:intergenic | 25.0% |
| !! | ACCCTTATTTATATAAGTTG+TGG | - | chr6_1:30393696-30393715 | Msa0881950:intron | 25.0% |
| TTCACAAGTGAAAAGAATTG+GGG | + | chr6_1:30386645-30386664 | None:intergenic | 30.0% | |
| !!! | TTATTGATTTTAGGTGTTCG+GGG | - | chr6_1:30386684-30386703 | Msa0881950:CDS | 30.0% |
| AAGATGCTGCTAATTTCTTT+CGG | - | chr6_1:30386747-30386766 | Msa0881950:CDS | 30.0% | |
| GCTAATTTCTTTCGGAAATA+TGG | - | chr6_1:30386755-30386774 | Msa0881950:CDS | 30.0% | |
| CACATTTGATACTTGCAATT+TGG | - | chr6_1:30386790-30386809 | Msa0881950:intron | 30.0% | |
| ! | TTTAAAGCATAGACACTTCT+GGG | - | chr6_1:30386925-30386944 | Msa0881950:CDS | 30.0% |
| CATTGAAGATACATCTATGA+AGG | - | chr6_1:30387079-30387098 | Msa0881950:intron | 30.0% | |
| ! | GGTTAGTTAAGTTCAAATGA+TGG | - | chr6_1:30387543-30387562 | Msa0881950:CDS | 30.0% |
| AGTTAAGTTCAAATGATGGT+TGG | - | chr6_1:30387547-30387566 | Msa0881950:CDS | 30.0% | |
| GGTTAATACTTAATGTGACA+TGG | - | chr6_1:30387568-30387587 | Msa0881950:intron | 30.0% | |
| ATGTATATCCAAACACGATT+TGG | + | chr6_1:30387698-30387717 | None:intergenic | 30.0% | |
| GTACATTTGAACACATATCA+TGG | + | chr6_1:30387743-30387762 | None:intergenic | 30.0% | |
| GTGTGTTTCATTACATTTAG+TGG | + | chr6_1:30387863-30387882 | None:intergenic | 30.0% | |
| ! | GTGTACCAAAATATCACTTT+TGG | - | chr6_1:30387922-30387941 | Msa0881950:intron | 30.0% |
| ! | AGGTTCCAAAAGTGATATTT+TGG | + | chr6_1:30387930-30387949 | None:intergenic | 30.0% |
| !! | TTACTTGGCTTTGGTTATTT+GGG | - | chr6_1:30387957-30387976 | Msa0881950:intron | 30.0% |
| !! | ACCTCAAAGTATTGAATTCA+GGG | + | chr6_1:30388270-30388289 | None:intergenic | 30.0% |
| !! | TACCTCAAAGTATTGAATTC+AGG | + | chr6_1:30388271-30388290 | None:intergenic | 30.0% |
| AGGTGACGTAAACTATAAAA+TGG | + | chr6_1:30388294-30388313 | None:intergenic | 30.0% | |
| CAATACACAGAAATACATCA+AGG | + | chr6_1:30388373-30388392 | None:intergenic | 30.0% | |
| ! | CTTGATGTATTTCTGTGTAT+TGG | - | chr6_1:30388371-30388390 | Msa0881950:CDS | 30.0% |
| !!! | CTGAAAACGGTGATTTTTTT+CGG | - | chr6_1:30388453-30388472 | Msa0881950:intron | 30.0% |
| ACAATTCTTAGGCCAAAAAA+TGG | - | chr6_1:30388529-30388548 | Msa0881950:intron | 30.0% | |
| GTGCTCTTAACTTTACTTTA+AGG | + | chr6_1:30388570-30388589 | None:intergenic | 30.0% | |
| ! | TTAAGAGCACAACTATGATT+TGG | - | chr6_1:30388580-30388599 | Msa0881950:intron | 30.0% |
| TTTAATCAAGAACAACAACG+GGG | + | chr6_1:30388825-30388844 | None:intergenic | 30.0% | |
| CTTTAATCAAGAACAACAAC+GGG | + | chr6_1:30388826-30388845 | None:intergenic | 30.0% | |
| !! | TGCATTTTAGGGAGTTAAAT+CGG | + | chr6_1:30388861-30388880 | None:intergenic | 30.0% |
| ! | GTTGTGATAGATTGCATTTT+AGG | + | chr6_1:30388873-30388892 | None:intergenic | 30.0% |
| CAATCTATCACAACTTAACA+TGG | - | chr6_1:30388879-30388898 | Msa0881950:intron | 30.0% | |
| ATGCTTTATAAACACTACAC+AGG | + | chr6_1:30389069-30389088 | None:intergenic | 30.0% | |
| TGTGTAGTGTTTATAAAGCA+TGG | - | chr6_1:30389068-30389087 | Msa0881950:intron | 30.0% | |
| GTGTAGTGTTTATAAAGCAT+GGG | - | chr6_1:30389069-30389088 | Msa0881950:intron | 30.0% | |
| ATCTCACTAATTTCCTCATT+AGG | - | chr6_1:30389269-30389288 | Msa0881950:intron | 30.0% | |
| ACAAAAAGAAACAAGCATGT+GGG | + | chr6_1:30389396-30389415 | None:intergenic | 30.0% | |
| AACAAAAAGAAACAAGCATG+TGG | + | chr6_1:30389397-30389416 | None:intergenic | 30.0% | |
| AGTTGAGAAATTTCTTAAGC+TGG | - | chr6_1:30389450-30389469 | Msa0881950:CDS | 30.0% | |
| CGTTTAAGGGTGAATTATTA+TGG | + | chr6_1:30389507-30389526 | None:intergenic | 30.0% | |
| TAATAATTCACCCTTAAACG+TGG | - | chr6_1:30389507-30389526 | Msa0881950:intron | 30.0% | |
| ! | AAAAGAAAGTCTGGAATTAC+TGG | + | chr6_1:30389544-30389563 | None:intergenic | 30.0% |
| TAATGCTACAAAAGAAAGTC+TGG | + | chr6_1:30389553-30389572 | None:intergenic | 30.0% | |
| ! | AAACAACTTGTCATTGATTG+AGG | - | chr6_1:30389611-30389630 | Msa0881950:CDS | 30.0% |
| !!! | CATTGGTTTTCATATCTTCT+TGG | - | chr6_1:30389704-30389723 | Msa0881950:intron | 30.0% |
| GTCATAGAATGAGAATATTC+AGG | - | chr6_1:30389764-30389783 | Msa0881950:intron | 30.0% | |
| !!! | CCCTTGTTTTTCTAGATATA+TGG | - | chr6_1:30389818-30389837 | Msa0881950:intron | 30.0% |
| !! | TGGTCTTATTACTGAAACAT+TGG | - | chr6_1:30389838-30389857 | Msa0881950:intron | 30.0% |
| !!! | TTTATTTTGGAGAAAACTGG+TGG | - | chr6_1:30389889-30389908 | Msa0881950:intron | 30.0% |
| ! | ATTCATTGATTGAACAACAC+AGG | - | chr6_1:30390065-30390084 | Msa0881950:intron | 30.0% |
| ! | TTCATTGATTGAACAACACA+GGG | - | chr6_1:30390066-30390085 | Msa0881950:intron | 30.0% |
| AATGAATCATAAGAAGGAAG+AGG | - | chr6_1:30390152-30390171 | Msa0881950:intron | 30.0% | |
| TGCACTAATTCAAATTGACA+AGG | - | chr6_1:30390374-30390393 | Msa0881950:intron | 30.0% | |
| !!! | TTGCTTTTTGATAATGTCTG+TGG | - | chr6_1:30390426-30390445 | Msa0881950:intron | 30.0% |
| !!! | TGCTTTTTGATAATGTCTGT+GGG | - | chr6_1:30390427-30390446 | Msa0881950:intron | 30.0% |
| !!! | TATTTTGGTGTTTCATTTGC+AGG | - | chr6_1:30390513-30390532 | Msa0881950:intron | 30.0% |
| ! | TTTTTCTTTGATGTTCTCCT+TGG | - | chr6_1:30390693-30390712 | Msa0881950:intron | 30.0% |
| ATGAGCTGCAGATATTAATT+TGG | + | chr6_1:30390730-30390749 | None:intergenic | 30.0% | |
| AAAATATAATACCTCGCCTA+AGG | + | chr6_1:30390782-30390801 | None:intergenic | 30.0% | |
| ACATCTAATTCAGTAATACC+TGG | + | chr6_1:30390882-30390901 | None:intergenic | 30.0% | |
| ! | ATATATGAGTGGTTAGTTCT+TGG | - | chr6_1:30391095-30391114 | Msa0881950:intron | 30.0% |
| TCAAGAAATGAAAATTCCCA+TGG | - | chr6_1:30391245-30391264 | Msa0881950:intron | 30.0% | |
| TTGATTGATTGCAGTTTCTA+TGG | - | chr6_1:30391388-30391407 | Msa0881950:intron | 30.0% | |
| TTGCAGTTTCTATGGAAAAA+TGG | - | chr6_1:30391396-30391415 | Msa0881950:intron | 30.0% | |
| AGTTTCTATGGAAAAATGGT+GGG | - | chr6_1:30391400-30391419 | Msa0881950:intron | 30.0% | |
| !! | GAGGCTTTAAATTTATGTCA+TGG | - | chr6_1:30391644-30391663 | Msa0881950:intron | 30.0% |
| TAAATTTATGTCATGGATGG+TGG | - | chr6_1:30391651-30391670 | Msa0881950:intron | 30.0% | |
| ATAGATTGTCTGGAAAAGTT+TGG | + | chr6_1:30391863-30391882 | None:intergenic | 30.0% | |
| ! | AAACTTTTCCAGACAATCTA+TGG | - | chr6_1:30391862-30391881 | Msa0881950:intron | 30.0% |
| !!! | TTCAAAGCATGAACCTTTTT+TGG | + | chr6_1:30391917-30391936 | None:intergenic | 30.0% |
| ! | TCGTTGTCTCAGATAATTTT+TGG | - | chr6_1:30391947-30391966 | Msa0881950:intron | 30.0% |
| ! | CGTTGTCTCAGATAATTTTT+GGG | - | chr6_1:30391948-30391967 | Msa0881950:intron | 30.0% |
| ! | TTCTTGGAGAAAGAGATTTT+TGG | - | chr6_1:30391987-30392006 | Msa0881950:intron | 30.0% |
| ! | TCTTGGAGAAAGAGATTTTT+GGG | - | chr6_1:30391988-30392007 | Msa0881950:intron | 30.0% |
| ! | GTGGATTTCTTGATTTTACA+TGG | - | chr6_1:30392090-30392109 | Msa0881950:intron | 30.0% |
| AATTAGTACCTATCAAAGCA+TGG | - | chr6_1:30392144-30392163 | Msa0881950:intron | 30.0% | |
| ! | GTTGTTATTATTACTGTGGT+TGG | + | chr6_1:30392341-30392360 | None:intergenic | 30.0% |
| ! | GATCGTTGTTATTATTACTG+TGG | + | chr6_1:30392345-30392364 | None:intergenic | 30.0% |
| AATATGAAGGCCAATTTCAA+AGG | + | chr6_1:30392539-30392558 | None:intergenic | 30.0% | |
| !! | TTGAAATTGGCCTTCATATT+TGG | - | chr6_1:30392539-30392558 | Msa0881950:intron | 30.0% |
| !! | TGAAATTGGCCTTCATATTT+GGG | - | chr6_1:30392540-30392559 | Msa0881950:intron | 30.0% |
| ! | CATATCAACACATGTTTTCA+CGG | + | chr6_1:30392683-30392702 | None:intergenic | 30.0% |
| TATTAGTCCTTTCATGCTAA+TGG | + | chr6_1:30392754-30392773 | None:intergenic | 30.0% | |
| !!! | CTTTCTTGCTTTGTTTTATC+AGG | - | chr6_1:30392777-30392796 | Msa0881950:intron | 30.0% |
| ATGACAAGGCTTCAAATATT+AGG | + | chr6_1:30393140-30393159 | None:intergenic | 30.0% | |
| AAAGCATGGAATATATGACA+AGG | + | chr6_1:30393154-30393173 | None:intergenic | 30.0% | |
| TGTTTGCACTCATGTTTATT+TGG | - | chr6_1:30393741-30393760 | Msa0881950:intron | 30.0% | |
| !! | TAACTCTAAAATTTGCTGCA+TGG | - | chr6_1:30393802-30393821 | Msa0881950:CDS | 30.0% |
| !!! | CATGGTTTTAATTTCTTTCC+TGG | - | chr6_1:30393876-30393895 | Msa0881950:CDS | 30.0% |
| ! | CTTTCGGAAATATGGTGTTA+CGG | - | chr6_1:30386763-30386782 | Msa0881950:CDS | 35.0% |
| !! | CAGAAGTGTCTATGCTTTAA+AGG | + | chr6_1:30386926-30386945 | None:intergenic | 35.0% |
| !! | CTTTAAAGCATAGACACTTC+TGG | - | chr6_1:30386924-30386943 | Msa0881950:CDS | 35.0% |
| AAAACACCTTAGACACTCAT+TGG | - | chr6_1:30387042-30387061 | Msa0881950:intron | 35.0% | |
| ! | TAAAGATGTGTCGAAGCATT+CGG | - | chr6_1:30387103-30387122 | Msa0881950:intron | 35.0% |
| TATACATATGTGTGTGTGTG+AGG | + | chr6_1:30387273-30387292 | None:intergenic | 35.0% | |
| TTAACCATCCAAATCGTGTT+TGG | - | chr6_1:30387687-30387706 | Msa0881950:intron | 35.0% | |
| ! | ATATCCAAACACGATTTGGA+TGG | + | chr6_1:30387694-30387713 | None:intergenic | 35.0% |
| AATGTACACCTGACAAATTG+TGG | - | chr6_1:30387756-30387775 | Msa0881950:intron | 35.0% | |
| GCAATTAACCACAATTTGTC+AGG | + | chr6_1:30387767-30387786 | None:intergenic | 35.0% | |
| TGGAACCTAAGAAACTTACT+TGG | - | chr6_1:30387942-30387961 | Msa0881950:intron | 35.0% | |
| CAAAGCCAAGTAAGTTTCTT+AGG | + | chr6_1:30387950-30387969 | None:intergenic | 35.0% | |
| CTAAGAAACTTACTTGGCTT+TGG | - | chr6_1:30387948-30387967 | Msa0881950:intron | 35.0% | |
| !! | CTTACTTGGCTTTGGTTATT+TGG | - | chr6_1:30387956-30387975 | Msa0881950:intron | 35.0% |
| TCCCTGAATTCAATACTTTG+AGG | - | chr6_1:30388266-30388285 | Msa0881950:intron | 35.0% | |
| TCTAAGGATACAAGGTTGTT+AGG | + | chr6_1:30388397-30388416 | None:intergenic | 35.0% | |
| TTAAAACACTGCATTGGAGA+TGG | + | chr6_1:30388420-30388439 | None:intergenic | 35.0% | |
| ! | GGCCAAAAAATGGTGAATTT+TGG | - | chr6_1:30388539-30388558 | Msa0881950:intron | 35.0% |
| TTGAATCACATGTGGTAACT+TGG | - | chr6_1:30388624-30388643 | Msa0881950:intron | 35.0% | |
| TGAATCACATGTGGTAACTT+GGG | - | chr6_1:30388625-30388644 | Msa0881950:intron | 35.0% | |
| !! | GTTCTTGAGTTGATTTCAGT+GGG | + | chr6_1:30388652-30388671 | None:intergenic | 35.0% |
| !! | TGTTCTTGAGTTGATTTCAG+TGG | + | chr6_1:30388653-30388672 | None:intergenic | 35.0% |
| TCATAATTCCATTAGTCGCA+TGG | + | chr6_1:30388722-30388741 | None:intergenic | 35.0% | |
| TTAATCAAGAACAACAACGG+GGG | + | chr6_1:30388824-30388843 | None:intergenic | 35.0% | |
| TCTCACATCTCTTAGAGATA+TGG | - | chr6_1:30389043-30389062 | Msa0881950:intron | 35.0% | |
| CTAACTCATCCTTACAAAAC+CGG | + | chr6_1:30389113-30389132 | None:intergenic | 35.0% | |
| AAGCTGGAAGTAATTCAACT+TGG | - | chr6_1:30389466-30389485 | Msa0881950:CDS | 35.0% | |
| AGTTGTTTGTCATTGACATC+AGG | + | chr6_1:30389599-30389618 | None:intergenic | 35.0% | |
| TGTACAGAAAACAGACAACA+AGG | + | chr6_1:30389743-30389762 | None:intergenic | 35.0% | |
| TGAAACATTGGAAATCCTCA+TGG | - | chr6_1:30389850-30389869 | Msa0881950:intron | 35.0% | |
| CATCAAATTATCTCTCTCAC+AGG | + | chr6_1:30390011-30390030 | None:intergenic | 35.0% | |
| CAGGGTACATATTTAATGTC+TGG | - | chr6_1:30390084-30390103 | Msa0881950:intron | 35.0% | |
| !!! | TAATCGGGTTTTTTTGTGCA+AGG | + | chr6_1:30390264-30390283 | None:intergenic | 35.0% |
| ! | AATTGACAAGGAGCGTATTA+TGG | - | chr6_1:30390386-30390405 | Msa0881950:intron | 35.0% |
| ! | ATTTGGTTTCATGTCAACCA+AGG | + | chr6_1:30390713-30390732 | None:intergenic | 35.0% |
| TCCTAATATTAATGCTGCTG+TGG | - | chr6_1:30390752-30390771 | Msa0881950:intron | 35.0% | |
| TCCACAGCAGCATTAATATT+AGG | + | chr6_1:30390756-30390775 | None:intergenic | 35.0% | |
| GTAATACCTGGATAATGTTG+AGG | + | chr6_1:30390870-30390889 | None:intergenic | 35.0% | |
| GAACCATATCTTGAAGATGA+AGG | - | chr6_1:30390903-30390922 | Msa0881950:intron | 35.0% | |
| ATTAACTGCATGCATCATCT+AGG | + | chr6_1:30390980-30390999 | None:intergenic | 35.0% | |
| GCTCTGACTAATGAATTATG+TGG | - | chr6_1:30391117-30391136 | Msa0881950:intron | 35.0% | |
| ! | ATATGTTTCAGGTAAGGTTC+AGG | - | chr6_1:30391205-30391224 | Msa0881950:intron | 35.0% |
| ATTCAGTTTGTCTGAACCAT+GGG | + | chr6_1:30391264-30391283 | None:intergenic | 35.0% | |
| TACCATATTTGTCCTAACTG+TGG | - | chr6_1:30391317-30391336 | Msa0881950:intron | 35.0% | |
| CAGTTTCTATGGAAAAATGG+TGG | - | chr6_1:30391399-30391418 | Msa0881950:intron | 35.0% | |
| CGATATGCTGTATTTCATAC+AGG | - | chr6_1:30391546-30391565 | Msa0881950:intron | 35.0% | |
| TGCTGTATTTCATACAGGAA+CGG | - | chr6_1:30391551-30391570 | Msa0881950:intron | 35.0% | |
| GTTAGTAACCATAGATTGTC+TGG | + | chr6_1:30391873-30391892 | None:intergenic | 35.0% | |
| AATAGATGGAGACATCTTCT+TGG | - | chr6_1:30391971-30391990 | Msa0881950:intron | 35.0% | |
| !! | AGAGATTTTTGGGAACATGT+TGG | - | chr6_1:30391998-30392017 | Msa0881950:intron | 35.0% |
| ! | GGGTAAAAGTTCTAATTCAG+TGG | - | chr6_1:30392071-30392090 | Msa0881950:intron | 35.0% |
| ! | GTGTATAGGAGATGGTTTTT+AGG | + | chr6_1:30392382-30392401 | None:intergenic | 35.0% |
| TGGAATGGATACTAGTGTAT+AGG | + | chr6_1:30392396-30392415 | None:intergenic | 35.0% | |
| !!! | GTAAGTTAGTTTTGCTGGAA+TGG | + | chr6_1:30392411-30392430 | None:intergenic | 35.0% |
| !! | TTATTTCTAGCCTTCACCAT+TGG | - | chr6_1:30392443-30392462 | Msa0881950:intron | 35.0% |
| !! | TATTTCTAGCCTTCACCATT+GGG | - | chr6_1:30392444-30392463 | Msa0881950:intron | 35.0% |
| ATACCAGAAGGAATAGAATG+AGG | + | chr6_1:30392470-30392489 | None:intergenic | 35.0% | |
| GATATGAATACACTCATCAC+TGG | + | chr6_1:30392721-30392740 | None:intergenic | 35.0% | |
| TCAGCAACAGATGATTCATA+TGG | + | chr6_1:30392841-30392860 | None:intergenic | 35.0% | |
| ! | TTTAGAGGTTTAGAACCATC+AGG | + | chr6_1:30392927-30392946 | None:intergenic | 35.0% |
| TGAGATTAACAAAGAGTCGA+AGG | - | chr6_1:30393027-30393046 | Msa0881950:intron | 35.0% | |
| ! | TTTTTGTATACGGAACGGAA+AGG | - | chr6_1:30393227-30393246 | Msa0881950:intron | 35.0% |
| TAACACTATGCTCTCTATCT+TGG | + | chr6_1:30393268-30393287 | None:intergenic | 35.0% | |
| AGAGGTGACAAGAAAGAAAA+AGG | + | chr6_1:30393300-30393319 | None:intergenic | 35.0% | |
| !! | GCAATGAGTTTCAAGTTTAG+AGG | + | chr6_1:30393318-30393337 | None:intergenic | 35.0% |
| ATGAACCATTTGCAAGTAAC+AGG | - | chr6_1:30393338-30393357 | Msa0881950:intron | 35.0% | |
| ! | GATGAATCTAGTCCTTTTCT+AGG | + | chr6_1:30393411-30393430 | None:intergenic | 35.0% |
| TCTCTTCTTGTACTGAGTTT+GGG | + | chr6_1:30393587-30393606 | None:intergenic | 35.0% | |
| TTCTCTTCTTGTACTGAGTT+TGG | + | chr6_1:30393588-30393607 | None:intergenic | 35.0% | |
| TACAAGAAGAGAAAAGACCA+TGG | - | chr6_1:30393595-30393614 | Msa0881950:CDS | 35.0% | |
| ACAAGAAGAGAAAAGACCAT+GGG | - | chr6_1:30393596-30393615 | Msa0881950:CDS | 35.0% | |
| !!! | TGGATGGGAAAGTTTTAAAG+AGG | - | chr6_1:30393716-30393735 | Msa0881950:intron | 35.0% |
| CAAGTCATTGTTGTCAAGTA+AGG | - | chr6_1:30393833-30393852 | Msa0881950:CDS | 35.0% | |
| TGGTATTTGGAAAAAGCTCA+TGG | - | chr6_1:30393858-30393877 | Msa0881950:CDS | 35.0% | |
| ATTTCTTTCCTGGTACTCAA+AGG | - | chr6_1:30393886-30393905 | Msa0881950:CDS | 35.0% | |
| CAACTATTACAGGACGATGA+AGG | + | chr6_1:30386727-30386746 | None:intergenic | 40.0% | |
| GCAGCATCTTCAACTATTAC+AGG | + | chr6_1:30386737-30386756 | None:intergenic | 40.0% | |
| TTCGACGTACAACACTCATA+CGG | - | chr6_1:30386977-30386996 | Msa0881950:CDS | 40.0% | |
| AAGTGTCCAATGAGTGTCTA+AGG | + | chr6_1:30387051-30387070 | None:intergenic | 40.0% | |
| TAGTGTCTACCTATGAAGCA+CGG | + | chr6_1:30387364-30387383 | None:intergenic | 40.0% | |
| TGTACAACACGTCACATTGA+AGG | + | chr6_1:30387431-30387450 | None:intergenic | 40.0% | |
| ! | ATTTGGGCTTCTTTTTGCAG+TGG | - | chr6_1:30387973-30387992 | Msa0881950:intron | 40.0% |
| ! | TTTGGGCTTCTTTTTGCAGT+GGG | - | chr6_1:30387974-30387993 | Msa0881950:intron | 40.0% |
| TCTTCAACCAACCCTCTTAT+TGG | - | chr6_1:30388032-30388051 | Msa0881950:intron | 40.0% | |
| CTTCAACCAACCCTCTTATT+GGG | - | chr6_1:30388033-30388052 | Msa0881950:intron | 40.0% | |
| ATAAAGCCCAATAAGAGGGT+TGG | + | chr6_1:30388042-30388061 | None:intergenic | 40.0% | |
| CCTCATAAAGCCCAATAAGA+GGG | + | chr6_1:30388046-30388065 | None:intergenic | 40.0% | |
| TCCTCATAAAGCCCAATAAG+AGG | + | chr6_1:30388047-30388066 | None:intergenic | 40.0% | |
| ! | TCTTATTGGGCTTTATGAGG+AGG | - | chr6_1:30388046-30388065 | Msa0881950:intron | 40.0% |
| ! | CTTATTGGGCTTTATGAGGA+GGG | - | chr6_1:30388047-30388066 | Msa0881950:intron | 40.0% |
| AACTTCAAACCTTTGCACTC+TGG | + | chr6_1:30388095-30388114 | None:intergenic | 40.0% | |
| ! | AAGGTGTGGTCTTACATATC+AGG | + | chr6_1:30388314-30388333 | None:intergenic | 40.0% |
| CCTAAGAATTGTCCCAGTAT+GGG | + | chr6_1:30388521-30388540 | None:intergenic | 40.0% | |
| CTTATAGACCATGCGACTAA+TGG | - | chr6_1:30388711-30388730 | Msa0881950:intron | 40.0% | |
| TGGAAATTCCACCTTCATTG+CGG | - | chr6_1:30388950-30388969 | Msa0881950:CDS | 40.0% | |
| !! | CTTCATTGTGTTGGCTTTGA+GGG | - | chr6_1:30389009-30389028 | Msa0881950:intron | 40.0% |
| !! | TTCATTGTGTTGGCTTTGAG+GGG | - | chr6_1:30389010-30389029 | Msa0881950:intron | 40.0% |
| !! | CGGTTTTGTAAGGATGAGTT+AGG | - | chr6_1:30389111-30389130 | Msa0881950:CDS | 40.0% |
| GGCATCTCAACTTATTGAGA+AGG | - | chr6_1:30389245-30389264 | Msa0881950:intron | 40.0% | |
| GTTTGGGAAACCACGTTTAA+GGG | + | chr6_1:30389520-30389539 | None:intergenic | 40.0% | |
| TGTTTGGGAAACCACGTTTA+AGG | + | chr6_1:30389521-30389540 | None:intergenic | 40.0% | |
| ! | GTCTGGAATTACTGGTGTTT+GGG | + | chr6_1:30389536-30389555 | None:intergenic | 40.0% |
| ! | AGTCTGGAATTACTGGTGTT+TGG | + | chr6_1:30389537-30389556 | None:intergenic | 40.0% |
| TAGCTTATACTGAGACCATG+AGG | + | chr6_1:30389868-30389887 | None:intergenic | 40.0% | |
| ATTATTGAGGGCAATGCTCT+AGG | - | chr6_1:30389970-30389989 | Msa0881950:intron | 40.0% | |
| GAGATGTGTTAGAGACTTAG+AGG | - | chr6_1:30390119-30390138 | Msa0881950:intron | 40.0% | |
| AGCTTTCCTCAACATTATCC+AGG | - | chr6_1:30390861-30390880 | Msa0881950:intron | 40.0% | |
| GTGCCTTCATCTTCAAGATA+TGG | + | chr6_1:30390909-30390928 | None:intergenic | 40.0% | |
| ! | TATCTTGAAGATGAAGGCAC+CGG | - | chr6_1:30390909-30390928 | Msa0881950:intron | 40.0% |
| CTGAACATATCGCAAATTGC+CGG | + | chr6_1:30390931-30390950 | None:intergenic | 40.0% | |
| GAATTCGGGAAGTTAACTGA+CGG | - | chr6_1:30391011-30391030 | Msa0881950:intron | 40.0% | |
| ACTCATATATCTTTCCCCAG+CGG | + | chr6_1:30391085-30391104 | None:intergenic | 40.0% | |
| ! | AGGTAAGGTTCAGGTTACAT+TGG | - | chr6_1:30391214-30391233 | Msa0881950:intron | 40.0% |
| ! | AGGTTCAGGTTACATTGGTT+TGG | - | chr6_1:30391219-30391238 | Msa0881950:intron | 40.0% |
| CATTCAGTTTGTCTGAACCA+TGG | + | chr6_1:30391265-30391284 | None:intergenic | 40.0% | |
| TTCAGACAAACTGAATGCAC+TGG | - | chr6_1:30391268-30391287 | Msa0881950:intron | 40.0% | |
| TGCCACAGTTAGGACAAATA+TGG | + | chr6_1:30391322-30391341 | None:intergenic | 40.0% | |
| ACGTTGTCGTTACAGTTAGA+AGG | - | chr6_1:30391577-30391596 | Msa0881950:intron | 40.0% | |
| CGTTGTCGTTACAGTTAGAA+GGG | - | chr6_1:30391578-30391597 | Msa0881950:intron | 40.0% | |
| ATATCATGTTTCAGGGACTC+AGG | + | chr6_1:30391777-30391796 | None:intergenic | 40.0% | |
| !! | GATTTTTGGGAACATGTTGG+TGG | - | chr6_1:30392001-30392020 | Msa0881950:intron | 40.0% |
| TGGTGGAATTGATGTCTCAT+TGG | - | chr6_1:30392018-30392037 | Msa0881950:intron | 40.0% | |
| ATGACAAGTGTGTGTGTGTT+CGG | + | chr6_1:30392180-30392199 | None:intergenic | 40.0% | |
| AGAAAAGAAAAGGACTGCAC+TGG | - | chr6_1:30392239-30392258 | Msa0881950:intron | 40.0% | |
| CCAGAGTCTATGACTTCAAA+GGG | - | chr6_1:30392280-30392299 | Msa0881950:CDS | 40.0% | |
| AAGGGAAAAATTCTCTGCAC+AGG | - | chr6_1:30392298-30392317 | Msa0881950:intron | 40.0% | |
| GGATACTAGTGTATAGGAGA+TGG | + | chr6_1:30392390-30392409 | None:intergenic | 40.0% | |
| ACTGTCAGTCCCAAATATGA+AGG | + | chr6_1:30392552-30392571 | None:intergenic | 40.0% | |
| ! | CACTCATGTGATTACCCTTT+TGG | + | chr6_1:30392643-30392662 | None:intergenic | 40.0% |
| CTCTATGCCATTAGCATGAA+AGG | - | chr6_1:30392744-30392763 | Msa0881950:intron | 40.0% | |
| TTTCTGTAACTTCTGCAGCA+AGG | + | chr6_1:30392812-30392831 | None:intergenic | 40.0% | |
| !! | TCTGTTGCTGATTTGTATGC+TGG | - | chr6_1:30392850-30392869 | Msa0881950:intron | 40.0% |
| ! | AGGATCCTGTTACTTGCAAA+TGG | + | chr6_1:30393346-30393365 | None:intergenic | 40.0% |
| AGTAACAGGATCCTATTTCG+TGG | - | chr6_1:30393352-30393371 | Msa0881950:intron | 40.0% | |
| ! | GAATCTAGTCCTTTTCTAGG+AGG | + | chr6_1:30393408-30393427 | None:intergenic | 40.0% |
| ! | AAGCTTTGTCGTCATCAGAA+CGG | - | chr6_1:30393472-30393491 | Msa0881950:intron | 40.0% |
| TCTTCTTGTACTGAGTTTGG+GGG | + | chr6_1:30393585-30393604 | None:intergenic | 40.0% | |
| CTCTTCTTGTACTGAGTTTG+GGG | + | chr6_1:30393586-30393605 | None:intergenic | 40.0% | |
| TCATTAGCACGTAAAACCCA+TGG | + | chr6_1:30393615-30393634 | None:intergenic | 40.0% | |
| !! | CAGGTGATTTGCTTCTAATC+TGG | + | chr6_1:30393647-30393666 | None:intergenic | 40.0% |
| GATTAGAAGCAAATCACCTG+AGG | - | chr6_1:30393647-30393666 | Msa0881950:CDS | 40.0% | |
| !! | TCTAAAATTTGCTGCATGGC+AGG | - | chr6_1:30393806-30393825 | Msa0881950:CDS | 40.0% |
| CATTGTTGTCAAGTAAGGCA+TGG | - | chr6_1:30393838-30393857 | Msa0881950:CDS | 40.0% | |
| GTCAAGTAAGGCATGGTATT+TGG | - | chr6_1:30393845-30393864 | Msa0881950:CDS | 40.0% | |
| GTGTGGAGTTGAAGAAATGG+GGG | + | chr6_1:30386565-30386584 | None:intergenic | 45.0% | |
| GGTGTGGAGTTGAAGAAATG+GGG | + | chr6_1:30386566-30386585 | None:intergenic | 45.0% | |
| GGGTGTGGAGTTGAAGAAAT+GGG | + | chr6_1:30386567-30386586 | None:intergenic | 45.0% | |
| CAATGAAGTGCGCATGTTAG+TGG | + | chr6_1:30386594-30386613 | None:intergenic | 45.0% | |
| !! | GCATAGACACTTCTGGGATT+AGG | - | chr6_1:30386931-30386950 | Msa0881950:CDS | 45.0% |
| !! | TTCTGGGATTAGGTGTGTCT+CGG | - | chr6_1:30386941-30386960 | Msa0881950:CDS | 45.0% |
| AGTAGTAGACGGATCGATGA+AGG | - | chr6_1:30387173-30387192 | Msa0881950:intron | 45.0% | |
| ACATATGTGTGTGTGTGAGG+AGG | + | chr6_1:30387270-30387289 | None:intergenic | 45.0% | |
| !! | TGGTGTCGACATGTTTGTGT+TGG | - | chr6_1:30387335-30387354 | Msa0881950:CDS | 45.0% |
| GTGACGTGTTGTACAACATC+AGG | - | chr6_1:30387436-30387455 | Msa0881950:intron | 45.0% | |
| ! | TTGGGCTTCTTTTTGCAGTG+GGG | - | chr6_1:30387975-30387994 | Msa0881950:intron | 45.0% |
| ! | CCCTCTTATTGGGCTTTATG+AGG | - | chr6_1:30388043-30388062 | Msa0881950:intron | 45.0% |
| ATCGACATTCCAGAGTGCAA+AGG | - | chr6_1:30388083-30388102 | Msa0881950:intron | 45.0% | |
| CTTGTAAGAAGCAGAAGGTG+TGG | + | chr6_1:30388328-30388347 | None:intergenic | 45.0% | |
| CTCAGCTTGTAAGAAGCAGA+AGG | + | chr6_1:30388333-30388352 | None:intergenic | 45.0% | |
| CTTCTGCTTCTTACAAGCTG+AGG | - | chr6_1:30388331-30388350 | Msa0881950:CDS | 45.0% | |
| GGAGATGGTCTAAGGATACA+AGG | + | chr6_1:30388405-30388424 | None:intergenic | 45.0% | |
| ACTGCATTGGAGATGGTCTA+AGG | + | chr6_1:30388413-30388432 | None:intergenic | 45.0% | |
| TGTCAGTAGAGTTCCCATAC+TGG | - | chr6_1:30388505-30388524 | Msa0881950:intron | 45.0% | |
| GTCAGTAGAGTTCCCATACT+GGG | - | chr6_1:30388506-30388525 | Msa0881950:intron | 45.0% | |
| CCCATACTGGGACAATTCTT+AGG | - | chr6_1:30388518-30388537 | Msa0881950:intron | 45.0% | |
| GCCTAAGAATTGTCCCAGTA+TGG | + | chr6_1:30388522-30388541 | None:intergenic | 45.0% | |
| GAGTGCTCTTGAATCACATG+TGG | - | chr6_1:30388616-30388635 | Msa0881950:intron | 45.0% | |
| ACAAGAGACAAGCAGAGAGT+TGG | + | chr6_1:30388782-30388801 | None:intergenic | 45.0% | |
| TATTTGTGGGATGTCGCTGT+TGG | - | chr6_1:30388930-30388949 | Msa0881950:CDS | 45.0% | |
| !! | CAACACAATGAAGGTGTTGG+AGG | + | chr6_1:30389002-30389021 | None:intergenic | 45.0% |
| CTCCAACACCTTCATTGTGT+TGG | - | chr6_1:30389000-30389019 | Msa0881950:intron | 45.0% | |
| ! | AGCCAACACAATGAAGGTGT+TGG | + | chr6_1:30389005-30389024 | None:intergenic | 45.0% |
| CCTCAAAGCCAACACAATGA+AGG | + | chr6_1:30389011-30389030 | None:intergenic | 45.0% | |
| !! | CCTTCATTGTGTTGGCTTTG+AGG | - | chr6_1:30389008-30389027 | Msa0881950:intron | 45.0% |
| !! | TCATTGTGTTGGCTTTGAGG+GGG | - | chr6_1:30389011-30389030 | Msa0881950:intron | 45.0% |
| !! | CCTTACAAAACCGGCTTGTA+CGG | + | chr6_1:30389104-30389123 | None:intergenic | 45.0% |
| ACTGAGAGAGACAGAATGAG+AGG | - | chr6_1:30390227-30390246 | Msa0881950:intron | 45.0% | |
| ! | TTTTGTGCAAGGAGCAAGTG+CGG | + | chr6_1:30390253-30390272 | None:intergenic | 45.0% |
| CGGCAATTTGCGATATGTTC+AGG | - | chr6_1:30390929-30390948 | Msa0881950:intron | 45.0% | |
| CTCATATATCTTTCCCCAGC+GGG | + | chr6_1:30391084-30391103 | None:intergenic | 45.0% | |
| GCTGGGGAAAGATATATGAG+TGG | - | chr6_1:30391084-30391103 | Msa0881950:intron | 45.0% | |
| CAAGAGAATCTGCCACAGTT+AGG | + | chr6_1:30391332-30391351 | None:intergenic | 45.0% | |
| !! | TATGGAAAAATGGTGGGCCA+CGG | - | chr6_1:30391406-30391425 | Msa0881950:intron | 45.0% |
| TGTCGTTACAGTTAGAAGGG+AGG | - | chr6_1:30391581-30391600 | Msa0881950:intron | 45.0% | |
| GTCGTTACAGTTAGAAGGGA+GGG | - | chr6_1:30391582-30391601 | Msa0881950:intron | 45.0% | |
| CTTATGAAATGGGGGTTGAC+AGG | - | chr6_1:30391710-30391729 | Msa0881950:intron | 45.0% | |
| TTGCTTGGCCAAAACTGGAT+GGG | + | chr6_1:30392045-30392064 | None:intergenic | 45.0% | |
| TTTGCTTGGCCAAAACTGGA+TGG | + | chr6_1:30392046-30392065 | None:intergenic | 45.0% | |
| TGTGTTTGCTTGGCCAAAAC+TGG | + | chr6_1:30392050-30392069 | None:intergenic | 45.0% | |
| !! | GTTTTGGCCAAGCAAACACA+CGG | - | chr6_1:30392050-30392069 | Msa0881950:intron | 45.0% |
| ! | TTTTGGCCAAGCAAACACAC+GGG | - | chr6_1:30392051-30392070 | Msa0881950:intron | 45.0% |
| ! | CTTTTACCCGTGTGTTTGCT+TGG | + | chr6_1:30392060-30392079 | None:intergenic | 45.0% |
| CCTTGTGTCCATGCTTTGAT+AGG | + | chr6_1:30392155-30392174 | None:intergenic | 45.0% | |
| CCTATCAAAGCATGGACACA+AGG | - | chr6_1:30392152-30392171 | Msa0881950:intron | 45.0% | |
| TGACAAGTGTGTGTGTGTTC+GGG | + | chr6_1:30392179-30392198 | None:intergenic | 45.0% | |
| AAGAAAAGGACTGCACTGGA+TGG | - | chr6_1:30392243-30392262 | Msa0881950:intron | 45.0% | |
| ATAGACTCTGGCTAACTGGA+GGG | + | chr6_1:30392271-30392290 | None:intergenic | 45.0% | |
| AGTCATAGACTCTGGCTAAC+TGG | + | chr6_1:30392275-30392294 | None:intergenic | 45.0% | |
| GCCAGAGTCTATGACTTCAA+AGG | - | chr6_1:30392279-30392298 | Msa0881950:CDS | 45.0% | |
| !! | CCCTTTGAAGTCATAGACTC+TGG | + | chr6_1:30392283-30392302 | None:intergenic | 45.0% |
| AGGAATAGAATGAGGCCCAA+TGG | + | chr6_1:30392462-30392481 | None:intergenic | 45.0% | |
| CAGGGAAGGTTTATACCAGA+AGG | + | chr6_1:30392482-30392501 | None:intergenic | 45.0% | |
| CTTCTGGTATAAACCTTCCC+TGG | - | chr6_1:30392480-30392499 | Msa0881950:intron | 45.0% | |
| ATAAACCAAACCAAAGGCCC+AGG | + | chr6_1:30392506-30392525 | None:intergenic | 45.0% | |
| ACTGACAGTCTGACATGCAT+GGG | - | chr6_1:30392563-30392582 | Msa0881950:intron | 45.0% | |
| GGGTAATCACATGAGTGAGA+TGG | - | chr6_1:30392646-30392665 | Msa0881950:intron | 45.0% | |
| ! | CTGATTTGTATGCTGGAGCT+GGG | - | chr6_1:30392857-30392876 | Msa0881950:intron | 45.0% |
| ! | TGATTTGTATGCTGGAGCTG+GGG | - | chr6_1:30392858-30392877 | Msa0881950:intron | 45.0% |
| ! | GATCCTATTTCGTGGCTTGT+GGG | - | chr6_1:30393360-30393379 | Msa0881950:intron | 45.0% |
| GTCATCGATCCTCCTAGAAA+AGG | - | chr6_1:30393396-30393415 | Msa0881950:intron | 45.0% | |
| CTAAATCAGACACTGACCGA+GGG | + | chr6_1:30393545-30393564 | None:intergenic | 45.0% | |
| ACTAAATCAGACACTGACCG+AGG | + | chr6_1:30393546-30393565 | None:intergenic | 45.0% | |
| CTTCTTGTACTGAGTTTGGG+GGG | + | chr6_1:30393584-30393603 | None:intergenic | 45.0% | |
| AGTGGAGTAATGTTTGCCTC+AGG | + | chr6_1:30393666-30393685 | None:intergenic | 45.0% | |
| TGAGGCAAACATTACTCCAC+TGG | - | chr6_1:30393665-30393684 | Msa0881950:CDS | 45.0% | |
| !!! | TATAATTTTATATCAAATAA+TGG | + | chr6_1:30391188-30391207 | None:intergenic | 5.0% |
| !!! | ATATAAAATATAAATTTTAG+AGG | + | chr6_1:30392942-30392961 | None:intergenic | 5.0% |
| GGAGATTTGAGGAGGAGGAT+GGG | + | chr6_1:30386535-30386554 | None:intergenic | 50.0% | |
| TGGAGATTTGAGGAGGAGGA+TGG | + | chr6_1:30386536-30386555 | None:intergenic | 50.0% | |
| GTTGCTGTGGAGATTTGAGG+AGG | + | chr6_1:30386543-30386562 | None:intergenic | 50.0% | |
| TGAAGAAATGGGGGTTGCTG+TGG | + | chr6_1:30386556-30386575 | None:intergenic | 50.0% | |
| GGGGTGTGGAGTTGAAGAAA+TGG | + | chr6_1:30386568-30386587 | None:intergenic | 50.0% | |
| AAGTGCGCATGTTAGTGGAG+GGG | + | chr6_1:30386589-30386608 | None:intergenic | 50.0% | |
| GAAGTGCGCATGTTAGTGGA+GGG | + | chr6_1:30386590-30386609 | None:intergenic | 50.0% | |
| TGAAGTGCGCATGTTAGTGG+AGG | + | chr6_1:30386591-30386610 | None:intergenic | 50.0% | |
| GGGGTGAAGAAGCTTACGAT+TGG | + | chr6_1:30386626-30386645 | None:intergenic | 50.0% | |
| GTCGTATCACGTGTCTGTGT+CGG | + | chr6_1:30386894-30386913 | None:intergenic | 50.0% | |
| GACGGATCGATGAAGGTGAA+CGG | - | chr6_1:30387180-30387199 | Msa0881950:intron | 50.0% | |
| TGTTGGACTCCGTGCTTCAT+AGG | - | chr6_1:30387352-30387371 | Msa0881950:intron | 50.0% | |
| ! | GCTTCTTTTTGCAGTGGGGT+TGG | - | chr6_1:30387979-30387998 | Msa0881950:intron | 50.0% |
| ! | TCTTTTTGCAGTGGGGTTGG+AGG | - | chr6_1:30387982-30388001 | Msa0881950:intron | 50.0% |
| !! | TTGGAGGTGTCGTGCGAAAT+TGG | - | chr6_1:30387998-30388017 | Msa0881950:intron | 50.0% |
| GTTGGTTGAAGAACCACGCA+CGG | + | chr6_1:30388024-30388043 | None:intergenic | 50.0% | |
| CAACAACGGGGGATCTAACT+TGG | + | chr6_1:30388813-30388832 | None:intergenic | 50.0% | |
| GCTGCGATGAAAGCAACTAG+GGG | + | chr6_1:30388980-30388999 | None:intergenic | 50.0% | |
| GGCTGCGATGAAAGCAACTA+GGG | + | chr6_1:30388981-30389000 | None:intergenic | 50.0% | |
| AGGCTGCGATGAAAGCAACT+AGG | + | chr6_1:30388982-30389001 | None:intergenic | 50.0% | |
| !! | AAAACCGGCTTGTACGGTGA+GGG | + | chr6_1:30389098-30389117 | None:intergenic | 50.0% |
| !! | CCGTACAAGCCGGTTTTGTA+AGG | - | chr6_1:30389101-30389120 | Msa0881950:CDS | 50.0% |
| TTCGGGAAGTTAACTGACGG+TGG | - | chr6_1:30391014-30391033 | Msa0881950:intron | 50.0% | |
| TCGGGAAGTTAACTGACGGT+GGG | - | chr6_1:30391015-30391034 | Msa0881950:intron | 50.0% | |
| GAAGTTAACTGACGGTGGGT+GGG | - | chr6_1:30391019-30391038 | Msa0881950:intron | 50.0% | |
| ATTAAATGAAGCCCGCTCCG+TGG | + | chr6_1:30391426-30391445 | None:intergenic | 50.0% | |
| ! | TCATTGGCCCCATCCAGTTT+TGG | - | chr6_1:30392034-30392053 | Msa0881950:intron | 50.0% |
| TGCTTGGCCAAAACTGGATG+GGG | + | chr6_1:30392044-30392063 | None:intergenic | 50.0% | |
| GACAAGTGTGTGTGTGTTCG+GGG | + | chr6_1:30392178-30392197 | None:intergenic | 50.0% | |
| CATAGACTCTGGCTAACTGG+AGG | + | chr6_1:30392272-30392291 | None:intergenic | 50.0% | |
| AGAATGAGGCCCAATGGTGA+AGG | + | chr6_1:30392456-30392475 | None:intergenic | 50.0% | |
| GGGCCTCATTCTATTCCTTC+TGG | - | chr6_1:30392464-30392483 | Msa0881950:intron | 50.0% | |
| GTATAAACCTTCCCTGGCCT+GGG | - | chr6_1:30392486-30392505 | Msa0881950:intron | 50.0% | |
| GACTGACAGTCTGACATGCA+TGG | - | chr6_1:30392562-30392581 | Msa0881950:intron | 50.0% | |
| TGACATGCATGGGACGCAAT+AGG | - | chr6_1:30392573-30392592 | Msa0881950:intron | 50.0% | |
| !! | GCTGATTTGTATGCTGGAGC+TGG | - | chr6_1:30392856-30392875 | Msa0881950:intron | 50.0% |
| TTGCCTGCACTTTCTTGTCG+CGG | + | chr6_1:30392902-30392921 | None:intergenic | 50.0% | |
| AAAGTGCAGGCAAGACCTGA+TGG | - | chr6_1:30392909-30392928 | Msa0881950:intron | 50.0% | |
| TGTGATGCTGCTGTCAACAG+TGG | + | chr6_1:30393086-30393105 | None:intergenic | 50.0% | |
| CTGTTGACAGCAGCATCACA+TGG | - | chr6_1:30393086-30393105 | Msa0881950:intron | 50.0% | |
| GGATCCTATTTCGTGGCTTG+TGG | - | chr6_1:30393359-30393378 | Msa0881950:intron | 50.0% | |
| ATAAGGGTTTGTGGCACCAG+TGG | + | chr6_1:30393684-30393703 | None:intergenic | 50.0% | |
| ATGACAGGTGAAGCGGTGGA+AGG | + | chr6_1:30386505-30386524 | None:intergenic | 55.0% | |
| TGGTGGCATGACAGGTGAAG+CGG | + | chr6_1:30386512-30386531 | None:intergenic | 55.0% | |
| GATTTGAGGAGGAGGATGGG+TGG | + | chr6_1:30386532-30386551 | None:intergenic | 55.0% | |
| GCTGTGGAGATTTGAGGAGG+AGG | + | chr6_1:30386540-30386559 | None:intergenic | 55.0% | |
| GGGGTTGCTGTGGAGATTTG+AGG | + | chr6_1:30386546-30386565 | None:intergenic | 55.0% | |
| AGTGCGCATGTTAGTGGAGG+GGG | + | chr6_1:30386588-30386607 | None:intergenic | 55.0% | |
| !! | TTGTGTTGGCTTTGAGGGGG+TGG | - | chr6_1:30389014-30389033 | Msa0881950:intron | 55.0% |
| !! | CAAAACCGGCTTGTACGGTG+AGG | + | chr6_1:30389099-30389118 | None:intergenic | 55.0% |
| CTCAGTCGCACGCAACATTG+TGG | + | chr6_1:30390213-30390232 | None:intergenic | 55.0% | |
| ATGCTGCTGTGGAGCTCCTT+AGG | - | chr6_1:30390763-30390782 | Msa0881950:intron | 55.0% | |
| GGAAGTTAACTGACGGTGGG+TGG | - | chr6_1:30391018-30391037 | Msa0881950:intron | 55.0% | |
| GGTGGGTGGGTGTTTACAGA+TGG | - | chr6_1:30391032-30391051 | Msa0881950:intron | 55.0% | |
| ACAACACGTCTCTTCCCGCT+GGG | - | chr6_1:30391067-30391086 | Msa0881950:intron | 55.0% | |
| !! | AAAAATGGTGGGCCACGGAG+CGG | - | chr6_1:30391411-30391430 | Msa0881950:intron | 55.0% |
| CAGTTAGAAGGGAGGGCTCT+TGG | - | chr6_1:30391589-30391608 | Msa0881950:intron | 55.0% | |
| AGGGCTCTTGGCTCATGTAC+TGG | - | chr6_1:30391601-30391620 | Msa0881950:intron | 55.0% | |
| GGTATAAACCTTCCCTGGCC+TGG | - | chr6_1:30392485-30392504 | Msa0881950:intron | 55.0% | |
| TATGCTGGAGCTGGGGTCAT+TGG | - | chr6_1:30392865-30392884 | Msa0881950:intron | 55.0% | |
| ATGCTGGAGCTGGGGTCATT+GGG | - | chr6_1:30392866-30392885 | Msa0881950:intron | 55.0% | |
| ! | TAGCCGCGACAAGAAAGTGC+AGG | - | chr6_1:30392896-30392915 | Msa0881950:intron | 55.0% |
| ATGCTGCTGTCAACAGTGGC+AGG | + | chr6_1:30393082-30393101 | None:intergenic | 55.0% | |
| GAGCCCACAAGCCACGAAAT+AGG | + | chr6_1:30393366-30393385 | None:intergenic | 55.0% | |
| ATGGCGGTGGTGAGACGAGT+CGG | + | chr6_1:30386482-30386501 | None:intergenic | 60.0% | |
| GTGAAGCGGTGGAAGGATGG+CGG | + | chr6_1:30386498-30386517 | None:intergenic | 60.0% | |
| CAGGTGAAGCGGTGGAAGGA+TGG | + | chr6_1:30386501-30386520 | None:intergenic | 60.0% | |
| TGGCATGACAGGTGAAGCGG+TGG | + | chr6_1:30386509-30386528 | None:intergenic | 60.0% | |
| ! | AGGATGGGTGGTGGCATGAC+AGG | + | chr6_1:30386520-30386539 | None:intergenic | 60.0% |
| TTGAGGAGGAGGATGGGTGG+TGG | + | chr6_1:30386529-30386548 | None:intergenic | 60.0% | |
| CATGTTAGTGGAGGGGGGTG+TGG | + | chr6_1:30386582-30386601 | None:intergenic | 60.0% | |
| GTGCGCATGTTAGTGGAGGG+GGG | + | chr6_1:30386587-30386606 | None:intergenic | 60.0% | |
| CTAGGGGCAGACCGCAATGA+AGG | + | chr6_1:30388964-30388983 | None:intergenic | 60.0% | |
| CACAACACGTCTCTTCCCGC+TGG | - | chr6_1:30391066-30391085 | Msa0881950:intron | 60.0% | |
| CAACACGTCTCTTCCCGCTG+GGG | - | chr6_1:30391068-30391087 | Msa0881950:intron | 60.0% | |
| !! | AAAATGGTGGGCCACGGAGC+GGG | - | chr6_1:30391412-30391431 | Msa0881950:intron | 60.0% |
| CAAACCAAAGGCCCAGGCCA+GGG | + | chr6_1:30392500-30392519 | None:intergenic | 60.0% | |
| ! | AAGCGGTGGAAGGATGGCGG+TGG | + | chr6_1:30386495-30386514 | None:intergenic | 65.0% |
| CGTGCGAAATTGGCCGTGCG+TGG | - | chr6_1:30388008-30388027 | Msa0881950:intron | 65.0% | |
| GGGGCAGACCGCAATGAAGG+TGG | + | chr6_1:30388961-30388980 | None:intergenic | 65.0% | |
| GCAGCCCTCACCGTACAAGC+CGG | - | chr6_1:30389091-30389110 | Msa0881950:CDS | 65.0% | |
| GCTGTGGAGCTCCTTAGGCG+AGG | - | chr6_1:30390768-30390787 | Msa0881950:intron | 65.0% | |
| CCAAACCAAAGGCCCAGGCC+AGG | + | chr6_1:30392501-30392520 | None:intergenic | 65.0% | |
| CCTGGCCTGGGCCTTTGGTT+TGG | - | chr6_1:30392498-30392517 | Msa0881950:intron | 65.0% | |
| CCAAAGGCCCAGGCCAGGGA+AGG | + | chr6_1:30392496-30392515 | None:intergenic | 70.0% | |
| CCTTCCCTGGCCTGGGCCTT+TGG | - | chr6_1:30392493-30392512 | Msa0881950:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 30386471 | 30393911 | 30386471 | ID=Msa0881950;Name=Msa0881950 |
| chr6_1 | mRNA | 30386471 | 30393911 | 30386471 | ID=Msa0881950-mRNA-1;Parent=Msa0881950;Name=Msa0881950-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0|0|1|0.84|0.92|14|0|453 |
| chr6_1 | exon | 30393754 | 30393911 | 30393754 | ID=Msa0881950-mRNA-1:exon:7608;Parent=Msa0881950-mRNA-1 |
| chr6_1 | exon | 30393571 | 30393685 | 30393571 | ID=Msa0881950-mRNA-1:exon:7607;Parent=Msa0881950-mRNA-1 |
| chr6_1 | exon | 30392278 | 30392314 | 30392278 | ID=Msa0881950-mRNA-1:exon:7606;Parent=Msa0881950-mRNA-1 |
| chr6_1 | exon | 30389593 | 30389637 | 30389593 | ID=Msa0881950-mRNA-1:exon:7605;Parent=Msa0881950-mRNA-1 |
| chr6_1 | exon | 30389432 | 30389499 | 30389432 | ID=Msa0881950-mRNA-1:exon:7604;Parent=Msa0881950-mRNA-1 |
| chr6_1 | exon | 30389277 | 30389331 | 30389277 | ID=Msa0881950-mRNA-1:exon:7603;Parent=Msa0881950-mRNA-1 |
| chr6_1 | exon | 30389087 | 30389166 | 30389087 | ID=Msa0881950-mRNA-1:exon:7602;Parent=Msa0881950-mRNA-1 |
| chr6_1 | exon | 30388897 | 30388980 | 30388897 | ID=Msa0881950-mRNA-1:exon:7601;Parent=Msa0881950-mRNA-1 |
| chr6_1 | exon | 30388310 | 30388423 | 30388310 | ID=Msa0881950-mRNA-1:exon:7600;Parent=Msa0881950-mRNA-1 |
| chr6_1 | exon | 30387471 | 30387583 | 30387471 | ID=Msa0881950-mRNA-1:exon:7599;Parent=Msa0881950-mRNA-1 |
| chr6_1 | exon | 30387253 | 30387370 | 30387253 | ID=Msa0881950-mRNA-1:exon:7598;Parent=Msa0881950-mRNA-1 |
| chr6_1 | exon | 30386889 | 30387022 | 30386889 | ID=Msa0881950-mRNA-1:exon:7597;Parent=Msa0881950-mRNA-1 |
| chr6_1 | exon | 30386645 | 30386801 | 30386645 | ID=Msa0881950-mRNA-1:exon:7596;Parent=Msa0881950-mRNA-1 |
| chr6_1 | exon | 30386471 | 30386554 | 30386471 | ID=Msa0881950-mRNA-1:exon:7595;Parent=Msa0881950-mRNA-1 |
| chr6_1 | CDS | 30393754 | 30393911 | 30393754 | ID=Msa0881950-mRNA-1:cds;Parent=Msa0881950-mRNA-1 |
| chr6_1 | CDS | 30393571 | 30393685 | 30393571 | ID=Msa0881950-mRNA-1:cds;Parent=Msa0881950-mRNA-1 |
| chr6_1 | CDS | 30392278 | 30392314 | 30392278 | ID=Msa0881950-mRNA-1:cds;Parent=Msa0881950-mRNA-1 |
| chr6_1 | CDS | 30389593 | 30389637 | 30389593 | ID=Msa0881950-mRNA-1:cds;Parent=Msa0881950-mRNA-1 |
| chr6_1 | CDS | 30389432 | 30389499 | 30389432 | ID=Msa0881950-mRNA-1:cds;Parent=Msa0881950-mRNA-1 |
| chr6_1 | CDS | 30389277 | 30389331 | 30389277 | ID=Msa0881950-mRNA-1:cds;Parent=Msa0881950-mRNA-1 |
| chr6_1 | CDS | 30389087 | 30389166 | 30389087 | ID=Msa0881950-mRNA-1:cds;Parent=Msa0881950-mRNA-1 |
| chr6_1 | CDS | 30388897 | 30388980 | 30388897 | ID=Msa0881950-mRNA-1:cds;Parent=Msa0881950-mRNA-1 |
| chr6_1 | CDS | 30388310 | 30388423 | 30388310 | ID=Msa0881950-mRNA-1:cds;Parent=Msa0881950-mRNA-1 |
| chr6_1 | CDS | 30387471 | 30387583 | 30387471 | ID=Msa0881950-mRNA-1:cds;Parent=Msa0881950-mRNA-1 |
| chr6_1 | CDS | 30387253 | 30387370 | 30387253 | ID=Msa0881950-mRNA-1:cds;Parent=Msa0881950-mRNA-1 |
| chr6_1 | CDS | 30386889 | 30387022 | 30386889 | ID=Msa0881950-mRNA-1:cds;Parent=Msa0881950-mRNA-1 |
| chr6_1 | CDS | 30386645 | 30386801 | 30386645 | ID=Msa0881950-mRNA-1:cds;Parent=Msa0881950-mRNA-1 |
| chr6_1 | CDS | 30386471 | 30386554 | 30386471 | ID=Msa0881950-mRNA-1:cds;Parent=Msa0881950-mRNA-1 |
| Gene Sequence |
| Protein sequence |
