AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0171920


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0171920 MtrunA17_Chr1g0190081 94.432 449 18 2 1 442 1 449 0.0 855
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0171920 AT3G04550.1 58.081 396 150 6 56 442 61 449 1.11e-153 443
Msa0171920 AT5G28500.1 53.864 440 188 9 8 442 5 434 3.82e-143 416
Msa0171920 AT5G28500.2 59.434 212 86 0 55 266 50 261 1.79e-82 255

Find 117 sgRNAs with CRISPR-Local

Find 306 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGGGTGGTGTTACCGGCTT+GGG 0.218551 1_4:-56777253 Msa0171920:CDS
TAAAGCTAGAAAAGTGATTT+TGG 0.219981 1_4:-56777502 Msa0171920:CDS
TGGTAATGATGTTGGTTTAA+AGG 0.259795 1_4:-56777064 Msa0171920:CDS
GGAAGGAGAAAGGGTGATTA+TGG 0.275153 1_4:-56777343 Msa0171920:CDS
TGTTCAAGAAAAGCAGTTCT+TGG 0.278998 1_4:+56777549 None:intergenic
CGGAGAAAGGGTGGGAGAAA+TGG 0.285910 1_4:-56777272 Msa0171920:CDS
GGACGGCTGAGATTGATTTA+AGG 0.286999 1_4:+56778153 None:intergenic
CTATCAGCAACCACCAAAAT+AGG 0.309921 1_4:+56777138 None:intergenic
ATGGGTGTTAACGAGTGTTT+AGG 0.310994 1_4:-56777015 Msa0171920:CDS
GTATAAGGAAGAGCCTATTT+TGG 0.313854 1_4:-56777151 Msa0171920:CDS
GGAGAAATGGGTGGTGTTAC+CGG 0.322308 1_4:-56777259 Msa0171920:CDS
GAATGATGATGGGCTCTATT+TGG 0.341099 1_4:-56777097 Msa0171920:CDS
GGTATTGTGGTGGCGGAGAA+AGG 0.343947 1_4:-56777285 Msa0171920:CDS
ATATGTTGAGTGAAGAAGTT+TGG 0.346774 1_4:-56776948 Msa0171920:CDS
TTCAATCTCACCACATTAAC+AGG 0.351102 1_4:+56777423 None:intergenic
GGAGAAAGGGTGGGAGAAAT+GGG 0.357471 1_4:-56777271 Msa0171920:CDS
GAAGGCTAATAGGTGGTATA+AGG 0.372638 1_4:-56777166 Msa0171920:CDS
TGGGTGTTAACGAGTGTTTA+GGG 0.380614 1_4:-56777014 Msa0171920:CDS
AGATCTAGCTCGTTCGATAA+AGG 0.388492 1_4:-56777688 Msa0171920:CDS
TTTGTATTACAGACAAAGTA+AGG 0.394057 1_4:-56777592 Msa0171920:CDS
GGAATGTAGTTATTGTTGTT+AGG 0.400847 1_4:-56776993 Msa0171920:CDS
TTTGATGGGAGAGGTGTTGG+TGG 0.417794 1_4:+56778053 None:intergenic
AATGGGTGGTGTTACCGGCT+TGG 0.425130 1_4:-56777254 Msa0171920:CDS
GATGCCGGTGGTTTCTTCAA+TGG 0.425964 1_4:+56777914 None:intergenic
TGGTTGCTGATAGGAGTAAG+AGG 0.436269 1_4:-56777128 Msa0171920:CDS
GGAGAGGTGTTGGTGGTGGC+CGG 0.440619 1_4:+56778060 None:intergenic
AGAAGAGATATGATGGTAAA+GGG 0.442786 1_4:-56777716 Msa0171920:CDS
GTAATAAGAACGGTTGAGAT+TGG 0.442968 1_4:+56778178 None:intergenic
AGGTGTTGGTGGTGGCCGGA+AGG 0.444065 1_4:+56778064 None:intergenic
TGCTGCAGCGCGTTGCGAAG+TGG 0.449630 1_4:+56777755 None:intergenic
ACGGTTGAGATTGGAGGAAG+AGG 0.450106 1_4:+56778187 None:intergenic
GAGAATTTCTTCATCAGTGT+TGG 0.451727 1_4:+56777830 None:intergenic
TTGGTGGTGGCCGGAAGGGT+TGG 0.452401 1_4:+56778069 None:intergenic
AACAACTATACCAACCCTTC+CGG 0.455105 1_4:-56778079 Msa0171920:CDS
TGTTGGTTTAAAGGTTCAAA+GGG 0.456616 1_4:-56777055 Msa0171920:CDS
CTGTTCAACGCCGGTGATGC+CGG 0.456625 1_4:+56777899 None:intergenic
AGGGAGGTGGAGAATGATGA+TGG 0.457400 1_4:-56777108 Msa0171920:CDS
GTATTGTGGTGGCGGAGAAA+GGG 0.458441 1_4:-56777284 Msa0171920:CDS
TTGTGGTGGCGGAGAAAGGG+TGG 0.459053 1_4:-56777281 Msa0171920:CDS
TGGGAAGGCTGAAGAGGAGG+AGG 0.459630 1_4:-56777469 Msa0171920:CDS
GCGAGGATGTCGATGCGACC+TGG 0.461881 1_4:+56778011 None:intergenic
GTTGAGTGGGAAGGCTGAAG+AGG 0.478627 1_4:-56777475 Msa0171920:CDS
GAGAAGAGATATGATGGTAA+AGG 0.482933 1_4:-56777717 Msa0171920:CDS
GAGTGGGAAGGCTGAAGAGG+AGG 0.488401 1_4:-56777472 Msa0171920:CDS
TCGCCAACCGTCTCGGTGCA+TGG 0.488440 1_4:-56777992 Msa0171920:CDS
CTCTATTTGGTAAAAGATGA+TGG 0.490267 1_4:-56777084 Msa0171920:CDS
TGGGAGGTGAAAAGCCTTCA+CGG 0.490867 1_4:+56777937 None:intergenic
AAAGATGATGGTAATGATGT+TGG 0.491642 1_4:-56777072 Msa0171920:CDS
GATGGGAGAGGTGTTGGTGG+TGG 0.491919 1_4:+56778056 None:intergenic
GGTGTTGGTGGTGGCCGGAA+GGG 0.494017 1_4:+56778065 None:intergenic
TAAAGCTGAGGAAGGAGAAA+GGG 0.501190 1_4:-56777352 Msa0171920:CDS
CTCTCTTACTTTGATAGCGG+TGG 0.504853 1_4:-56777810 Msa0171920:CDS
GACATCCTCGCCAACCGTCT+CGG 0.514848 1_4:-56777999 Msa0171920:CDS
TATGTTGAGTGAAGAAGTTT+GGG 0.515005 1_4:-56776947 Msa0171920:CDS
GGTTGGTATAGTTGTTTCTG+TGG 0.515153 1_4:+56778086 None:intergenic
CGGTTGAGATTGGAGGAAGA+GGG 0.515311 1_4:+56778188 None:intergenic
GTGAAAAGCCTTCACGGAGG+AGG 0.515910 1_4:+56777943 None:intergenic
GAAGAAACCACCGGCATCAC+CGG 0.516277 1_4:-56777909 Msa0171920:CDS
GTAAAGCTGAGGAAGGAGAA+AGG 0.520531 1_4:-56777353 Msa0171920:CDS
ATGTTGGTTTAAAGGTTCAA+AGG 0.522076 1_4:-56777056 Msa0171920:CDS
AAAGCAGTTCTTGGATCAGA+AGG 0.525966 1_4:+56777558 None:intergenic
GGAAGGTGAGTTTGGTATTG+TGG 0.527760 1_4:-56777298 Msa0171920:CDS
CCGGTGGTTTCTTCAATGGT+GGG 0.529159 1_4:+56777918 None:intergenic
ATTGTGGAGAAGAGATATGA+TGG 0.533595 1_4:-56777723 Msa0171920:CDS
TGATAGGAGTAAGAGGGAGG+TGG 0.538668 1_4:-56777121 Msa0171920:CDS
CCTTTCCCTAAATTAACCAC+CGG 0.543574 1_4:+56777228 None:intergenic
TGAGTTTGGTATTGTGGTGG+CGG 0.548046 1_4:-56777292 Msa0171920:CDS
TGGGTGGTGTTACCGGCTTG+GGG 0.549034 1_4:-56777252 Msa0171920:CDS
GCCGGTGGTTTCTTCAATGG+TGG 0.549809 1_4:+56777917 None:intergenic
ATCACTTCCCTCCTCCGTGA+AGG 0.550355 1_4:-56777951 Msa0171920:CDS
TACCACCTATTAGCCTTCCA+TGG 0.550710 1_4:+56777171 None:intergenic
TACGACAACCTCGACATCCC+AGG 0.551748 1_4:-56778029 Msa0171920:CDS
GGTTGCTGATAGGAGTAAGA+GGG 0.554153 1_4:-56777127 Msa0171920:CDS
AGTTCGTGACACTCTTGTAC+AGG 0.555093 1_4:-56777853 Msa0171920:CDS
TGAAAAGCCTTCACGGAGGA+GGG 0.561008 1_4:+56777944 None:intergenic
CCGGTGGTTAATTTAGGGAA+AGG 0.562795 1_4:-56777228 Msa0171920:CDS
ATTTAAGGCGGTAATAAGAA+CGG 0.564306 1_4:+56778168 None:intergenic
ATAAGAACGGTTGAGATTGG+AGG 0.569107 1_4:+56778181 None:intergenic
TGCAGCAGCGCGTTTCATTG+TGG 0.569545 1_4:-56777739 Msa0171920:CDS
TGCTGATAGGAGTAAGAGGG+AGG 0.570809 1_4:-56777124 Msa0171920:CDS
ACGAATTTCGTATAAAACTT+CGG 0.573452 1_4:+56777785 None:intergenic
AAATAAGCAAGACAATCTCC+CGG 0.574397 1_4:+56777612 None:intergenic
AGGTGAGTTTGGTATTGTGG+TGG 0.575600 1_4:-56777295 Msa0171920:CDS
TGTGGTGGCGGAGAAAGGGT+GGG 0.576608 1_4:-56777280 Msa0171920:CDS
AATAAGCAAGACAATCTCCC+GGG 0.581163 1_4:+56777613 None:intergenic
TTTGGAGGAGTTGAGTGGGA+AGG 0.583878 1_4:-56777484 Msa0171920:CDS
AATGTGGTGAGATTGAAGAT+TGG 0.584496 1_4:-56777417 Msa0171920:CDS
GGGTGGTGTTACCGGCTTGG+GGG 0.590439 1_4:-56777251 Msa0171920:CDS
TTCAACGCCGGTGATGCCGG+TGG 0.591596 1_4:+56777902 None:intergenic
CAGCGCGTTGCGAAGTGGAG+AGG 0.594130 1_4:+56777760 None:intergenic
GGGAGGTGGAGAATGATGAT+GGG 0.594428 1_4:-56777107 Msa0171920:CDS
CGAGGATGTCGATGCGACCT+GGG 0.601264 1_4:+56778012 None:intergenic
ATTAAAAGTGCCTGTTAATG+TGG 0.605844 1_4:-56777433 Msa0171920:CDS
ATTCTCTCTTACTTTGATAG+CGG 0.611214 1_4:-56777813 Msa0171920:CDS
GAAAGGGTGGGAGAAATGGG+TGG 0.611751 1_4:-56777268 Msa0171920:CDS
CCTTCCTCAGCTTTACACAC+CGG 0.615461 1_4:+56777360 None:intergenic
ATGCACCGAGACGGTTGGCG+AGG 0.618334 1_4:+56777994 None:intergenic
TGATGAAGGGTTGTTGAGGA+CGG 0.618497 1_4:+56778136 None:intergenic
CGGAGGAGGGAAGTGATGAG+AGG 0.622871 1_4:+56777957 None:intergenic
CCGGTGTGTAAAGCTGAGGA+AGG 0.623619 1_4:-56777360 Msa0171920:CDS
GTGCCATGCACCGAGACGGT+TGG 0.624137 1_4:+56777989 None:intergenic
GTGGTTTCTTCAATGGTGGG+AGG 0.629301 1_4:+56777921 None:intergenic
AGTAGCTGAGGCGACTTCAG+TGG 0.630858 1_4:-56777391 Msa0171920:CDS
CGGCTGAGATTGATTTAAGG+CGG 0.631698 1_4:+56778156 None:intergenic
GAAGATTGGTGAAGTAGCTG+AGG 0.639205 1_4:-56777403 Msa0171920:CDS
TACCATGGAAGGCTAATAGG+TGG 0.643378 1_4:-56777173 Msa0171920:CDS
CCCACCATTGAAGAAACCAC+CGG 0.643863 1_4:-56777918 Msa0171920:CDS
GAAGAGATATGATGGTAAAG+GGG 0.645708 1_4:-56777715 Msa0171920:CDS
ATTCGTGCCATGCACCGAGA+CGG 0.651777 1_4:+56777985 None:intergenic
AGGCCACCTACTGAAAATGA+TGG 0.653259 1_4:-56776973 Msa0171920:CDS
CGATGCGACCTGGGATGTCG+AGG 0.661450 1_4:+56778021 None:intergenic
GTGTTTACAGAACTGATACA+TGG 0.661658 1_4:+56778239 None:intergenic
GATACGATTCTGTTCAACGC+CGG 0.685752 1_4:+56777890 None:intergenic
GTTGGTTTAAAGGTTCAAAG+GGG 0.692675 1_4:-56777054 Msa0171920:CDS
TTTGCCGGTGTGTAAAGCTG+AGG 0.704737 1_4:-56777364 Msa0171920:CDS
TGTGTGATGAAGGGTTGTTG+AGG 0.731033 1_4:+56778132 None:intergenic
GAGGTGAAAAGCCTTCACGG+AGG 0.826855 1_4:+56777940 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! ACGAATTTCGTATAAAACTT+CGG + chr1_4:56777408-56777427 None:intergenic 25.0%
! TTTGTATTACAGACAAAGTA+AGG - chr1_4:56777598-56777617 Msa0171920:CDS 25.0%
!! TAAAGCTAGAAAAGTGATTT+TGG - chr1_4:56777688-56777707 Msa0171920:CDS 25.0%
! ACGAATTTCGTATAAAACTT+CGG + chr1_4:56777408-56777427 None:intergenic 25.0%
! TTTGTATTACAGACAAAGTA+AGG - chr1_4:56777598-56777617 Msa0171920:CDS 25.0%
!! TAAAGCTAGAAAAGTGATTT+TGG - chr1_4:56777688-56777707 Msa0171920:CDS 25.0%
! ATTTAAGGCGGTAATAAGAA+CGG + chr1_4:56777025-56777044 None:intergenic 30.0%
ATTCTCTCTTACTTTGATAG+CGG - chr1_4:56777377-56777396 Msa0171920:CDS 30.0%
AGAAGAGATATGATGGTAAA+GGG - chr1_4:56777474-56777493 Msa0171920:CDS 30.0%
!! ATTAAAAGTGCCTGTTAATG+TGG - chr1_4:56777757-56777776 Msa0171920:CDS 30.0%
!!! AGCACCTTTTGAGATTAAAA+AGG - chr1_4:56777871-56777890 Msa0171920:CDS 30.0%
! CCTTCCTTTTTAATCTCAAA+AGG + chr1_4:56777878-56777897 None:intergenic 30.0%
!!! CCTTTTGAGATTAAAAAGGA+AGG - chr1_4:56777875-56777894 Msa0171920:CDS 30.0%
ATTAAAAAGGAAGGTGAGTT+TGG - chr1_4:56777884-56777903 Msa0171920:CDS 30.0%
CTCTATTTGGTAAAAGATGA+TGG - chr1_4:56778106-56778125 Msa0171920:CDS 30.0%
! AAAGATGATGGTAATGATGT+TGG - chr1_4:56778118-56778137 Msa0171920:CDS 30.0%
!! TGGTAATGATGTTGGTTTAA+AGG - chr1_4:56778126-56778145 Msa0171920:CDS 30.0%
!! ATGTTGGTTTAAAGGTTCAA+AGG - chr1_4:56778134-56778153 Msa0171920:CDS 30.0%
!! TGTTGGTTTAAAGGTTCAAA+GGG - chr1_4:56778135-56778154 Msa0171920:CDS 30.0%
! GGAATGTAGTTATTGTTGTT+AGG - chr1_4:56778197-56778216 Msa0171920:CDS 30.0%
! ATATCACCATCATTTTCAGT+AGG + chr1_4:56778226-56778245 None:intergenic 30.0%
ATATGTTGAGTGAAGAAGTT+TGG - chr1_4:56778242-56778261 Msa0171920:CDS 30.0%
TATGTTGAGTGAAGAAGTTT+GGG - chr1_4:56778243-56778262 Msa0171920:CDS 30.0%
! ATTTAAGGCGGTAATAAGAA+CGG + chr1_4:56777025-56777044 None:intergenic 30.0%
ATTCTCTCTTACTTTGATAG+CGG - chr1_4:56777377-56777396 Msa0171920:CDS 30.0%
AGAAGAGATATGATGGTAAA+GGG - chr1_4:56777474-56777493 Msa0171920:CDS 30.0%
!! ATTAAAAGTGCCTGTTAATG+TGG - chr1_4:56777757-56777776 Msa0171920:CDS 30.0%
!!! AGCACCTTTTGAGATTAAAA+AGG - chr1_4:56777871-56777890 Msa0171920:CDS 30.0%
! CCTTCCTTTTTAATCTCAAA+AGG + chr1_4:56777878-56777897 None:intergenic 30.0%
!!! CCTTTTGAGATTAAAAAGGA+AGG - chr1_4:56777875-56777894 Msa0171920:CDS 30.0%
ATTAAAAAGGAAGGTGAGTT+TGG - chr1_4:56777884-56777903 Msa0171920:CDS 30.0%
CTCTATTTGGTAAAAGATGA+TGG - chr1_4:56778106-56778125 Msa0171920:CDS 30.0%
! AAAGATGATGGTAATGATGT+TGG - chr1_4:56778118-56778137 Msa0171920:CDS 30.0%
!! TGGTAATGATGTTGGTTTAA+AGG - chr1_4:56778126-56778145 Msa0171920:CDS 30.0%
!! ATGTTGGTTTAAAGGTTCAA+AGG - chr1_4:56778134-56778153 Msa0171920:CDS 30.0%
!! TGTTGGTTTAAAGGTTCAAA+GGG - chr1_4:56778135-56778154 Msa0171920:CDS 30.0%
! GGAATGTAGTTATTGTTGTT+AGG - chr1_4:56778197-56778216 Msa0171920:CDS 30.0%
! ATATCACCATCATTTTCAGT+AGG + chr1_4:56778226-56778245 None:intergenic 30.0%
ATATGTTGAGTGAAGAAGTT+TGG - chr1_4:56778242-56778261 Msa0171920:CDS 30.0%
TATGTTGAGTGAAGAAGTTT+GGG - chr1_4:56778243-56778262 Msa0171920:CDS 30.0%
GTGTTTACAGAACTGATACA+TGG + chr1_4:56776954-56776973 None:intergenic 35.0%
GTAATAAGAACGGTTGAGAT+TGG + chr1_4:56777015-56777034 None:intergenic 35.0%
!!! GTTTTTTGCTGTGTGATGAA+GGG + chr1_4:56777070-56777089 None:intergenic 35.0%
!!! TGTTTTTTGCTGTGTGATGA+AGG + chr1_4:56777071-56777090 None:intergenic 35.0%
GAGAATTTCTTCATCAGTGT+TGG + chr1_4:56777363-56777382 None:intergenic 35.0%
ATTGTGGAGAAGAGATATGA+TGG - chr1_4:56777467-56777486 Msa0171920:CDS 35.0%
GAGAAGAGATATGATGGTAA+AGG - chr1_4:56777473-56777492 Msa0171920:CDS 35.0%
GAAGAGATATGATGGTAAAG+GGG - chr1_4:56777475-56777494 Msa0171920:CDS 35.0%
TAGACGCGGTGAAAAAAATT+GGG - chr1_4:56777535-56777554 Msa0171920:CDS 35.0%
!!! GAGTTTTGATTATCATCTCC+CGG - chr1_4:56777559-56777578 Msa0171920:CDS 35.0%
!!! AGTTTTGATTATCATCTCCC+GGG - chr1_4:56777560-56777579 Msa0171920:CDS 35.0%
AAATAAGCAAGACAATCTCC+CGG + chr1_4:56777581-56777600 None:intergenic 35.0%
TGTTCAAGAAAAGCAGTTCT+TGG + chr1_4:56777644-56777663 None:intergenic 35.0%
! AGCTAGAAAAGTGATTTTGG+AGG - chr1_4:56777691-56777710 Msa0171920:CDS 35.0%
TTCAATCTCACCACATTAAC+AGG + chr1_4:56777770-56777789 None:intergenic 35.0%
AATGTGGTGAGATTGAAGAT+TGG - chr1_4:56777773-56777792 Msa0171920:CDS 35.0%
! TTTTACCATGGAAGGCTAAT+AGG - chr1_4:56778014-56778033 Msa0171920:CDS 35.0%
! GTATAAGGAAGAGCCTATTT+TGG - chr1_4:56778039-56778058 Msa0171920:CDS 35.0%
! GTTGGTTTAAAGGTTCAAAG+GGG - chr1_4:56778136-56778155 Msa0171920:CDS 35.0%
!! GGTTCGATTTTGAAGGAAAT+GGG - chr1_4:56778157-56778176 Msa0171920:CDS 35.0%
GTGTTTACAGAACTGATACA+TGG + chr1_4:56776954-56776973 None:intergenic 35.0%
GTAATAAGAACGGTTGAGAT+TGG + chr1_4:56777015-56777034 None:intergenic 35.0%
!!! GTTTTTTGCTGTGTGATGAA+GGG + chr1_4:56777070-56777089 None:intergenic 35.0%
!!! TGTTTTTTGCTGTGTGATGA+AGG + chr1_4:56777071-56777090 None:intergenic 35.0%
GAGAATTTCTTCATCAGTGT+TGG + chr1_4:56777363-56777382 None:intergenic 35.0%
ATTGTGGAGAAGAGATATGA+TGG - chr1_4:56777467-56777486 Msa0171920:CDS 35.0%
GAGAAGAGATATGATGGTAA+AGG - chr1_4:56777473-56777492 Msa0171920:CDS 35.0%
GAAGAGATATGATGGTAAAG+GGG - chr1_4:56777475-56777494 Msa0171920:CDS 35.0%
TAGACGCGGTGAAAAAAATT+GGG - chr1_4:56777535-56777554 Msa0171920:CDS 35.0%
!!! GAGTTTTGATTATCATCTCC+CGG - chr1_4:56777559-56777578 Msa0171920:CDS 35.0%
!!! AGTTTTGATTATCATCTCCC+GGG - chr1_4:56777560-56777579 Msa0171920:CDS 35.0%
AAATAAGCAAGACAATCTCC+CGG + chr1_4:56777581-56777600 None:intergenic 35.0%
TGTTCAAGAAAAGCAGTTCT+TGG + chr1_4:56777644-56777663 None:intergenic 35.0%
! AGCTAGAAAAGTGATTTTGG+AGG - chr1_4:56777691-56777710 Msa0171920:CDS 35.0%
TTCAATCTCACCACATTAAC+AGG + chr1_4:56777770-56777789 None:intergenic 35.0%
AATGTGGTGAGATTGAAGAT+TGG - chr1_4:56777773-56777792 Msa0171920:CDS 35.0%
! TTTTACCATGGAAGGCTAAT+AGG - chr1_4:56778014-56778033 Msa0171920:CDS 35.0%
! GTATAAGGAAGAGCCTATTT+TGG - chr1_4:56778039-56778058 Msa0171920:CDS 35.0%
! GTTGGTTTAAAGGTTCAAAG+GGG - chr1_4:56778136-56778155 Msa0171920:CDS 35.0%
!! GGTTCGATTTTGAAGGAAAT+GGG - chr1_4:56778157-56778176 Msa0171920:CDS 35.0%
ATAAGAACGGTTGAGATTGG+AGG + chr1_4:56777012-56777031 None:intergenic 40.0%
!! GGTTGGTATAGTTGTTTCTG+TGG + chr1_4:56777107-56777126 None:intergenic 40.0%
AACAACTATACCAACCCTTC+CGG - chr1_4:56777111-56777130 Msa0171920:CDS 40.0%
!!! TATTTTGATGGGAGAGGTGT+TGG + chr1_4:56777143-56777162 None:intergenic 40.0%
!!! TTGTCGTATTTTGATGGGAG+AGG + chr1_4:56777149-56777168 None:intergenic 40.0%
!!! CGAGGTTGTCGTATTTTGAT+GGG + chr1_4:56777154-56777173 None:intergenic 40.0%
!! TCGAGGTTGTCGTATTTTGA+TGG + chr1_4:56777155-56777174 None:intergenic 40.0%
! AGATCTAGCTCGTTCGATAA+AGG - chr1_4:56777502-56777521 Msa0171920:CDS 40.0%
! AAGGATTTTCCTAGTAGACG+CGG - chr1_4:56777521-56777540 Msa0171920:CDS 40.0%
!!! TTTTTTTCACCGCGTCTACT+AGG + chr1_4:56777533-56777552 None:intergenic 40.0%
GTAGACGCGGTGAAAAAAAT+TGG - chr1_4:56777534-56777553 Msa0171920:CDS 40.0%
AATAAGCAAGACAATCTCCC+GGG + chr1_4:56777580-56777599 None:intergenic 40.0%
AAAGCAGTTCTTGGATCAGA+AGG + chr1_4:56777635-56777654 None:intergenic 40.0%
!! TGATTTTGGAGGAGTTGAGT+GGG - chr1_4:56777702-56777721 Msa0171920:CDS 40.0%
TAAAGCTGAGGAAGGAGAAA+GGG - chr1_4:56777838-56777857 Msa0171920:CDS 40.0%
CCTTTCCCTAAATTAACCAC+CGG + chr1_4:56777965-56777984 None:intergenic 40.0%
! TGGATGCTAGAGTTTTACCA+TGG - chr1_4:56778002-56778021 Msa0171920:CDS 40.0%
! TGCTAGAGTTTTACCATGGA+AGG - chr1_4:56778006-56778025 Msa0171920:CDS 40.0%
GAAGGCTAATAGGTGGTATA+AGG - chr1_4:56778024-56778043 Msa0171920:CDS 40.0%
!! TAAGGAAGAGCCTATTTTGG+TGG - chr1_4:56778042-56778061 Msa0171920:CDS 40.0%
CTATCAGCAACCACCAAAAT+AGG + chr1_4:56778055-56778074 None:intergenic 40.0%
!!! CTATTTTGGTGGTTGCTGAT+AGG - chr1_4:56778053-56778072 Msa0171920:CDS 40.0%
!! GAATGATGATGGGCTCTATT+TGG - chr1_4:56778093-56778112 Msa0171920:CDS 40.0%
! TCAAAGGGGTTCGATTTTGA+AGG - chr1_4:56778150-56778169 Msa0171920:CDS 40.0%
!! GGGTTCGATTTTGAAGGAAA+TGG - chr1_4:56778156-56778175 Msa0171920:CDS 40.0%
ATGGGTGTTAACGAGTGTTT+AGG - chr1_4:56778175-56778194 Msa0171920:CDS 40.0%
TGGGTGTTAACGAGTGTTTA+GGG - chr1_4:56778176-56778195 Msa0171920:CDS 40.0%
! TCACCATCATTTTCAGTAGG+TGG + chr1_4:56778223-56778242 None:intergenic 40.0%
ATAAGAACGGTTGAGATTGG+AGG + chr1_4:56777012-56777031 None:intergenic 40.0%
!! GGTTGGTATAGTTGTTTCTG+TGG + chr1_4:56777107-56777126 None:intergenic 40.0%
AACAACTATACCAACCCTTC+CGG - chr1_4:56777111-56777130 Msa0171920:CDS 40.0%
!!! TATTTTGATGGGAGAGGTGT+TGG + chr1_4:56777143-56777162 None:intergenic 40.0%
!!! TTGTCGTATTTTGATGGGAG+AGG + chr1_4:56777149-56777168 None:intergenic 40.0%
!!! CGAGGTTGTCGTATTTTGAT+GGG + chr1_4:56777154-56777173 None:intergenic 40.0%
!! TCGAGGTTGTCGTATTTTGA+TGG + chr1_4:56777155-56777174 None:intergenic 40.0%
! AGATCTAGCTCGTTCGATAA+AGG - chr1_4:56777502-56777521 Msa0171920:CDS 40.0%
! AAGGATTTTCCTAGTAGACG+CGG - chr1_4:56777521-56777540 Msa0171920:CDS 40.0%
!!! TTTTTTTCACCGCGTCTACT+AGG + chr1_4:56777533-56777552 None:intergenic 40.0%
GTAGACGCGGTGAAAAAAAT+TGG - chr1_4:56777534-56777553 Msa0171920:CDS 40.0%
AATAAGCAAGACAATCTCCC+GGG + chr1_4:56777580-56777599 None:intergenic 40.0%
AAAGCAGTTCTTGGATCAGA+AGG + chr1_4:56777635-56777654 None:intergenic 40.0%
!! TGATTTTGGAGGAGTTGAGT+GGG - chr1_4:56777702-56777721 Msa0171920:CDS 40.0%
TAAAGCTGAGGAAGGAGAAA+GGG - chr1_4:56777838-56777857 Msa0171920:CDS 40.0%
CCTTTCCCTAAATTAACCAC+CGG + chr1_4:56777965-56777984 None:intergenic 40.0%
! TGGATGCTAGAGTTTTACCA+TGG - chr1_4:56778002-56778021 Msa0171920:CDS 40.0%
! TGCTAGAGTTTTACCATGGA+AGG - chr1_4:56778006-56778025 Msa0171920:CDS 40.0%
GAAGGCTAATAGGTGGTATA+AGG - chr1_4:56778024-56778043 Msa0171920:CDS 40.0%
!! TAAGGAAGAGCCTATTTTGG+TGG - chr1_4:56778042-56778061 Msa0171920:CDS 40.0%
CTATCAGCAACCACCAAAAT+AGG + chr1_4:56778055-56778074 None:intergenic 40.0%
!!! CTATTTTGGTGGTTGCTGAT+AGG - chr1_4:56778053-56778072 Msa0171920:CDS 40.0%
!! GAATGATGATGGGCTCTATT+TGG - chr1_4:56778093-56778112 Msa0171920:CDS 40.0%
! TCAAAGGGGTTCGATTTTGA+AGG - chr1_4:56778150-56778169 Msa0171920:CDS 40.0%
!! GGGTTCGATTTTGAAGGAAA+TGG - chr1_4:56778156-56778175 Msa0171920:CDS 40.0%
ATGGGTGTTAACGAGTGTTT+AGG - chr1_4:56778175-56778194 Msa0171920:CDS 40.0%
TGGGTGTTAACGAGTGTTTA+GGG - chr1_4:56778176-56778195 Msa0171920:CDS 40.0%
! TCACCATCATTTTCAGTAGG+TGG + chr1_4:56778223-56778242 None:intergenic 40.0%
! CGGCTGAGATTGATTTAAGG+CGG + chr1_4:56777037-56777056 None:intergenic 45.0%
! GGACGGCTGAGATTGATTTA+AGG + chr1_4:56777040-56777059 None:intergenic 45.0%
TGATGAAGGGTTGTTGAGGA+CGG + chr1_4:56777057-56777076 None:intergenic 45.0%
TGTGTGATGAAGGGTTGTTG+AGG + chr1_4:56777061-56777080 None:intergenic 45.0%
GATACGATTCTGTTCAACGC+CGG + chr1_4:56777303-56777322 None:intergenic 45.0%
AGTTCGTGACACTCTTGTAC+AGG - chr1_4:56777337-56777356 Msa0171920:CDS 45.0%
!! CTCTCTTACTTTGATAGCGG+TGG - chr1_4:56777380-56777399 Msa0171920:CDS 45.0%
!! GTGATTTTGGAGGAGTTGAG+TGG - chr1_4:56777701-56777720 Msa0171920:CDS 45.0%
GAAGATTGGTGAAGTAGCTG+AGG - chr1_4:56777787-56777806 Msa0171920:CDS 45.0%
!! GACTTCAGTGGTTGTTTTGC+CGG - chr1_4:56777811-56777830 Msa0171920:CDS 45.0%
GTAAAGCTGAGGAAGGAGAA+AGG - chr1_4:56777837-56777856 Msa0171920:CDS 45.0%
GGAAGGAGAAAGGGTGATTA+TGG - chr1_4:56777847-56777866 Msa0171920:CDS 45.0%
GGAAGGTGAGTTTGGTATTG+TGG - chr1_4:56777892-56777911 Msa0171920:CDS 45.0%
AGGTGAGTTTGGTATTGTGG+TGG - chr1_4:56777895-56777914 Msa0171920:CDS 45.0%
TGAGTTTGGTATTGTGGTGG+CGG - chr1_4:56777898-56777917 Msa0171920:CDS 45.0%
CCGGTGGTTAATTTAGGGAA+AGG - chr1_4:56777962-56777981 Msa0171920:CDS 45.0%
!!! AGGCGTTGTTGTGTCGTTTT+TGG - chr1_4:56777982-56778001 Msa0171920:CDS 45.0%
TACCATGGAAGGCTAATAGG+TGG - chr1_4:56778017-56778036 Msa0171920:CDS 45.0%
!! TACCACCTATTAGCCTTCCA+TGG + chr1_4:56778022-56778041 None:intergenic 45.0%
TGGTTGCTGATAGGAGTAAG+AGG - chr1_4:56778062-56778081 Msa0171920:CDS 45.0%
GGTTGCTGATAGGAGTAAGA+GGG - chr1_4:56778063-56778082 Msa0171920:CDS 45.0%
AGGCCACCTACTGAAAATGA+TGG - chr1_4:56778217-56778236 Msa0171920:CDS 45.0%
! CGGCTGAGATTGATTTAAGG+CGG + chr1_4:56777037-56777056 None:intergenic 45.0%
! GGACGGCTGAGATTGATTTA+AGG + chr1_4:56777040-56777059 None:intergenic 45.0%
TGATGAAGGGTTGTTGAGGA+CGG + chr1_4:56777057-56777076 None:intergenic 45.0%
TGTGTGATGAAGGGTTGTTG+AGG + chr1_4:56777061-56777080 None:intergenic 45.0%
GATACGATTCTGTTCAACGC+CGG + chr1_4:56777303-56777322 None:intergenic 45.0%
AGTTCGTGACACTCTTGTAC+AGG - chr1_4:56777337-56777356 Msa0171920:CDS 45.0%
!! CTCTCTTACTTTGATAGCGG+TGG - chr1_4:56777380-56777399 Msa0171920:CDS 45.0%
!! GTGATTTTGGAGGAGTTGAG+TGG - chr1_4:56777701-56777720 Msa0171920:CDS 45.0%
GAAGATTGGTGAAGTAGCTG+AGG - chr1_4:56777787-56777806 Msa0171920:CDS 45.0%
!! GACTTCAGTGGTTGTTTTGC+CGG - chr1_4:56777811-56777830 Msa0171920:CDS 45.0%
GTAAAGCTGAGGAAGGAGAA+AGG - chr1_4:56777837-56777856 Msa0171920:CDS 45.0%
GGAAGGAGAAAGGGTGATTA+TGG - chr1_4:56777847-56777866 Msa0171920:CDS 45.0%
GGAAGGTGAGTTTGGTATTG+TGG - chr1_4:56777892-56777911 Msa0171920:CDS 45.0%
AGGTGAGTTTGGTATTGTGG+TGG - chr1_4:56777895-56777914 Msa0171920:CDS 45.0%
TGAGTTTGGTATTGTGGTGG+CGG - chr1_4:56777898-56777917 Msa0171920:CDS 45.0%
CCGGTGGTTAATTTAGGGAA+AGG - chr1_4:56777962-56777981 Msa0171920:CDS 45.0%
!!! AGGCGTTGTTGTGTCGTTTT+TGG - chr1_4:56777982-56778001 Msa0171920:CDS 45.0%
TACCATGGAAGGCTAATAGG+TGG - chr1_4:56778017-56778036 Msa0171920:CDS 45.0%
!! TACCACCTATTAGCCTTCCA+TGG + chr1_4:56778022-56778041 None:intergenic 45.0%
TGGTTGCTGATAGGAGTAAG+AGG - chr1_4:56778062-56778081 Msa0171920:CDS 45.0%
GGTTGCTGATAGGAGTAAGA+GGG - chr1_4:56778063-56778082 Msa0171920:CDS 45.0%
AGGCCACCTACTGAAAATGA+TGG - chr1_4:56778217-56778236 Msa0171920:CDS 45.0%
CGGTTGAGATTGGAGGAAGA+GGG + chr1_4:56777005-56777024 None:intergenic 50.0%
ACGGTTGAGATTGGAGGAAG+AGG + chr1_4:56777006-56777025 None:intergenic 50.0%
!! TTTGATGGGAGAGGTGTTGG+TGG + chr1_4:56777140-56777159 None:intergenic 50.0%
TGAAAAGCCTTCACGGAGGA+GGG + chr1_4:56777249-56777268 None:intergenic 50.0%
TGGGAGGTGAAAAGCCTTCA+CGG + chr1_4:56777256-56777275 None:intergenic 50.0%
! GTGGTTTCTTCAATGGTGGG+AGG + chr1_4:56777272-56777291 None:intergenic 50.0%
CCGGTGGTTTCTTCAATGGT+GGG + chr1_4:56777275-56777294 None:intergenic 50.0%
CCCACCATTGAAGAAACCAC+CGG - chr1_4:56777272-56777291 Msa0171920:CDS 50.0%
GATGCCGGTGGTTTCTTCAA+TGG + chr1_4:56777279-56777298 None:intergenic 50.0%
TTTGGAGGAGTTGAGTGGGA+AGG - chr1_4:56777706-56777725 Msa0171920:CDS 50.0%
TTTGCCGGTGTGTAAAGCTG+AGG - chr1_4:56777826-56777845 Msa0171920:CDS 50.0%
CCTTCCTCAGCTTTACACAC+CGG + chr1_4:56777833-56777852 None:intergenic 50.0%
!! GTATTGTGGTGGCGGAGAAA+GGG - chr1_4:56777906-56777925 Msa0171920:CDS 50.0%
GGAGAAAGGGTGGGAGAAAT+GGG - chr1_4:56777919-56777938 Msa0171920:CDS 50.0%
!! GGAGAAATGGGTGGTGTTAC+CGG - chr1_4:56777931-56777950 Msa0171920:CDS 50.0%
TGCTGATAGGAGTAAGAGGG+AGG - chr1_4:56778066-56778085 Msa0171920:CDS 50.0%
TGATAGGAGTAAGAGGGAGG+TGG - chr1_4:56778069-56778088 Msa0171920:CDS 50.0%
AGGGAGGTGGAGAATGATGA+TGG - chr1_4:56778082-56778101 Msa0171920:CDS 50.0%
GGGAGGTGGAGAATGATGAT+GGG - chr1_4:56778083-56778102 Msa0171920:CDS 50.0%
CGGTTGAGATTGGAGGAAGA+GGG + chr1_4:56777005-56777024 None:intergenic 50.0%
ACGGTTGAGATTGGAGGAAG+AGG + chr1_4:56777006-56777025 None:intergenic 50.0%
!! TTTGATGGGAGAGGTGTTGG+TGG + chr1_4:56777140-56777159 None:intergenic 50.0%
TGAAAAGCCTTCACGGAGGA+GGG + chr1_4:56777249-56777268 None:intergenic 50.0%
TGGGAGGTGAAAAGCCTTCA+CGG + chr1_4:56777256-56777275 None:intergenic 50.0%
! GTGGTTTCTTCAATGGTGGG+AGG + chr1_4:56777272-56777291 None:intergenic 50.0%
CCGGTGGTTTCTTCAATGGT+GGG + chr1_4:56777275-56777294 None:intergenic 50.0%
CCCACCATTGAAGAAACCAC+CGG - chr1_4:56777272-56777291 Msa0171920:CDS 50.0%
GATGCCGGTGGTTTCTTCAA+TGG + chr1_4:56777279-56777298 None:intergenic 50.0%
TTTGGAGGAGTTGAGTGGGA+AGG - chr1_4:56777706-56777725 Msa0171920:CDS 50.0%
TTTGCCGGTGTGTAAAGCTG+AGG - chr1_4:56777826-56777845 Msa0171920:CDS 50.0%
CCTTCCTCAGCTTTACACAC+CGG + chr1_4:56777833-56777852 None:intergenic 50.0%
!! GTATTGTGGTGGCGGAGAAA+GGG - chr1_4:56777906-56777925 Msa0171920:CDS 50.0%
GGAGAAAGGGTGGGAGAAAT+GGG - chr1_4:56777919-56777938 Msa0171920:CDS 50.0%
!! GGAGAAATGGGTGGTGTTAC+CGG - chr1_4:56777931-56777950 Msa0171920:CDS 50.0%
TGCTGATAGGAGTAAGAGGG+AGG - chr1_4:56778066-56778085 Msa0171920:CDS 50.0%
TGATAGGAGTAAGAGGGAGG+TGG - chr1_4:56778069-56778088 Msa0171920:CDS 50.0%
AGGGAGGTGGAGAATGATGA+TGG - chr1_4:56778082-56778101 Msa0171920:CDS 50.0%
GGGAGGTGGAGAATGATGAT+GGG - chr1_4:56778083-56778102 Msa0171920:CDS 50.0%
TACGACAACCTCGACATCCC+AGG - chr1_4:56777161-56777180 Msa0171920:CDS 55.0%
ATTCGTGCCATGCACCGAGA+CGG + chr1_4:56777208-56777227 None:intergenic 55.0%
ATCACTTCCCTCCTCCGTGA+AGG - chr1_4:56777239-56777258 Msa0171920:CDS 55.0%
GTGAAAAGCCTTCACGGAGG+AGG + chr1_4:56777250-56777269 None:intergenic 55.0%
GAGGTGAAAAGCCTTCACGG+AGG + chr1_4:56777253-56777272 None:intergenic 55.0%
GCCGGTGGTTTCTTCAATGG+TGG + chr1_4:56777276-56777295 None:intergenic 55.0%
GAAGAAACCACCGGCATCAC+CGG - chr1_4:56777281-56777300 Msa0171920:CDS 55.0%
TGCAGCAGCGCGTTTCATTG+TGG - chr1_4:56777451-56777470 Msa0171920:CDS 55.0%
GTTGAGTGGGAAGGCTGAAG+AGG - chr1_4:56777715-56777734 Msa0171920:CDS 55.0%
AGTAGCTGAGGCGACTTCAG+TGG - chr1_4:56777799-56777818 Msa0171920:CDS 55.0%
CCGGTGTGTAAAGCTGAGGA+AGG - chr1_4:56777830-56777849 Msa0171920:CDS 55.0%
!! GGTATTGTGGTGGCGGAGAA+AGG - chr1_4:56777905-56777924 Msa0171920:CDS 55.0%
CGGAGAAAGGGTGGGAGAAA+TGG - chr1_4:56777918-56777937 Msa0171920:CDS 55.0%
GAAAGGGTGGGAGAAATGGG+TGG - chr1_4:56777922-56777941 Msa0171920:CDS 55.0%
!! AATGGGTGGTGTTACCGGCT+TGG - chr1_4:56777936-56777955 Msa0171920:CDS 55.0%
!! ATGGGTGGTGTTACCGGCTT+GGG - chr1_4:56777937-56777956 Msa0171920:CDS 55.0%
TGGGGGCCGGTGGTTAATTT+AGG - chr1_4:56777956-56777975 Msa0171920:CDS 55.0%
GGGGGCCGGTGGTTAATTTA+GGG - chr1_4:56777957-56777976 Msa0171920:CDS 55.0%
TACGACAACCTCGACATCCC+AGG - chr1_4:56777161-56777180 Msa0171920:CDS 55.0%
ATTCGTGCCATGCACCGAGA+CGG + chr1_4:56777208-56777227 None:intergenic 55.0%
ATCACTTCCCTCCTCCGTGA+AGG - chr1_4:56777239-56777258 Msa0171920:CDS 55.0%
GTGAAAAGCCTTCACGGAGG+AGG + chr1_4:56777250-56777269 None:intergenic 55.0%
GAGGTGAAAAGCCTTCACGG+AGG + chr1_4:56777253-56777272 None:intergenic 55.0%
GCCGGTGGTTTCTTCAATGG+TGG + chr1_4:56777276-56777295 None:intergenic 55.0%
GAAGAAACCACCGGCATCAC+CGG - chr1_4:56777281-56777300 Msa0171920:CDS 55.0%
TGCAGCAGCGCGTTTCATTG+TGG - chr1_4:56777451-56777470 Msa0171920:CDS 55.0%
GTTGAGTGGGAAGGCTGAAG+AGG - chr1_4:56777715-56777734 Msa0171920:CDS 55.0%
AGTAGCTGAGGCGACTTCAG+TGG - chr1_4:56777799-56777818 Msa0171920:CDS 55.0%
CCGGTGTGTAAAGCTGAGGA+AGG - chr1_4:56777830-56777849 Msa0171920:CDS 55.0%
!! GGTATTGTGGTGGCGGAGAA+AGG - chr1_4:56777905-56777924 Msa0171920:CDS 55.0%
CGGAGAAAGGGTGGGAGAAA+TGG - chr1_4:56777918-56777937 Msa0171920:CDS 55.0%
GAAAGGGTGGGAGAAATGGG+TGG - chr1_4:56777922-56777941 Msa0171920:CDS 55.0%
!! AATGGGTGGTGTTACCGGCT+TGG - chr1_4:56777936-56777955 Msa0171920:CDS 55.0%
!! ATGGGTGGTGTTACCGGCTT+GGG - chr1_4:56777937-56777956 Msa0171920:CDS 55.0%
TGGGGGCCGGTGGTTAATTT+AGG - chr1_4:56777956-56777975 Msa0171920:CDS 55.0%
GGGGGCCGGTGGTTAATTTA+GGG - chr1_4:56777957-56777976 Msa0171920:CDS 55.0%
!! GATGGGAGAGGTGTTGGTGG+TGG + chr1_4:56777137-56777156 None:intergenic 60.0%
CGAGGATGTCGATGCGACCT+GGG + chr1_4:56777181-56777200 None:intergenic 60.0%
GACATCCTCGCCAACCGTCT+CGG - chr1_4:56777191-56777210 Msa0171920:CDS 60.0%
CGGAGGAGGGAAGTGATGAG+AGG + chr1_4:56777236-56777255 None:intergenic 60.0%
CTGTTCAACGCCGGTGATGC+CGG + chr1_4:56777294-56777313 None:intergenic 60.0%
GAGTGGGAAGGCTGAAGAGG+AGG - chr1_4:56777718-56777737 Msa0171920:CDS 60.0%
TGGGAAGGCTGAAGAGGAGG+AGG - chr1_4:56777721-56777740 Msa0171920:CDS 60.0%
!! TTGTGGTGGCGGAGAAAGGG+TGG - chr1_4:56777909-56777928 Msa0171920:CDS 60.0%
!! TGTGGTGGCGGAGAAAGGGT+GGG - chr1_4:56777910-56777929 Msa0171920:CDS 60.0%
!! TGGGTGGTGTTACCGGCTTG+GGG - chr1_4:56777938-56777957 Msa0171920:CDS 60.0%
!! GATGGGAGAGGTGTTGGTGG+TGG + chr1_4:56777137-56777156 None:intergenic 60.0%
CGAGGATGTCGATGCGACCT+GGG + chr1_4:56777181-56777200 None:intergenic 60.0%
GACATCCTCGCCAACCGTCT+CGG - chr1_4:56777191-56777210 Msa0171920:CDS 60.0%
CGGAGGAGGGAAGTGATGAG+AGG + chr1_4:56777236-56777255 None:intergenic 60.0%
CTGTTCAACGCCGGTGATGC+CGG + chr1_4:56777294-56777313 None:intergenic 60.0%
GAGTGGGAAGGCTGAAGAGG+AGG - chr1_4:56777718-56777737 Msa0171920:CDS 60.0%
TGGGAAGGCTGAAGAGGAGG+AGG - chr1_4:56777721-56777740 Msa0171920:CDS 60.0%
!! TTGTGGTGGCGGAGAAAGGG+TGG - chr1_4:56777909-56777928 Msa0171920:CDS 60.0%
!! TGTGGTGGCGGAGAAAGGGT+GGG - chr1_4:56777910-56777929 Msa0171920:CDS 60.0%
!! TGGGTGGTGTTACCGGCTTG+GGG - chr1_4:56777938-56777957 Msa0171920:CDS 60.0%
!! TTGGTGGTGGCCGGAAGGGT+TGG + chr1_4:56777124-56777143 None:intergenic 65.0%
!! GGTGTTGGTGGTGGCCGGAA+GGG + chr1_4:56777128-56777147 None:intergenic 65.0%
!! AGGTGTTGGTGGTGGCCGGA+AGG + chr1_4:56777129-56777148 None:intergenic 65.0%
!! GGAGAGGTGTTGGTGGTGGC+CGG + chr1_4:56777133-56777152 None:intergenic 65.0%
CGATGCGACCTGGGATGTCG+AGG + chr1_4:56777172-56777191 None:intergenic 65.0%
GCGAGGATGTCGATGCGACC+TGG + chr1_4:56777182-56777201 None:intergenic 65.0%
ATGCACCGAGACGGTTGGCG+AGG + chr1_4:56777199-56777218 None:intergenic 65.0%
! TCGCCAACCGTCTCGGTGCA+TGG - chr1_4:56777198-56777217 Msa0171920:CDS 65.0%
GTGCCATGCACCGAGACGGT+TGG + chr1_4:56777204-56777223 None:intergenic 65.0%
TTCAACGCCGGTGATGCCGG+TGG + chr1_4:56777291-56777310 None:intergenic 65.0%
CAGCGCGTTGCGAAGTGGAG+AGG + chr1_4:56777433-56777452 None:intergenic 65.0%
TGCTGCAGCGCGTTGCGAAG+TGG + chr1_4:56777438-56777457 None:intergenic 65.0%
!! GGGTGGTGTTACCGGCTTGG+GGG - chr1_4:56777939-56777958 Msa0171920:CDS 65.0%
TTAACCACCGGCCCCCAAGC+CGG + chr1_4:56777953-56777972 None:intergenic 65.0%
!! TTGGTGGTGGCCGGAAGGGT+TGG + chr1_4:56777124-56777143 None:intergenic 65.0%
!! GGTGTTGGTGGTGGCCGGAA+GGG + chr1_4:56777128-56777147 None:intergenic 65.0%
!! AGGTGTTGGTGGTGGCCGGA+AGG + chr1_4:56777129-56777148 None:intergenic 65.0%
!! GGAGAGGTGTTGGTGGTGGC+CGG + chr1_4:56777133-56777152 None:intergenic 65.0%
CGATGCGACCTGGGATGTCG+AGG + chr1_4:56777172-56777191 None:intergenic 65.0%
GCGAGGATGTCGATGCGACC+TGG + chr1_4:56777182-56777201 None:intergenic 65.0%
ATGCACCGAGACGGTTGGCG+AGG + chr1_4:56777199-56777218 None:intergenic 65.0%
! TCGCCAACCGTCTCGGTGCA+TGG - chr1_4:56777198-56777217 Msa0171920:CDS 65.0%
GTGCCATGCACCGAGACGGT+TGG + chr1_4:56777204-56777223 None:intergenic 65.0%
TTCAACGCCGGTGATGCCGG+TGG + chr1_4:56777291-56777310 None:intergenic 65.0%
CAGCGCGTTGCGAAGTGGAG+AGG + chr1_4:56777433-56777452 None:intergenic 65.0%
TGCTGCAGCGCGTTGCGAAG+TGG + chr1_4:56777438-56777457 None:intergenic 65.0%
!! GGGTGGTGTTACCGGCTTGG+GGG - chr1_4:56777939-56777958 Msa0171920:CDS 65.0%
TTAACCACCGGCCCCCAAGC+CGG + chr1_4:56777953-56777972 None:intergenic 65.0%
!! GGTGTTACCGGCTTGGGGGC+CGG - chr1_4:56777943-56777962 Msa0171920:CDS 70.0%
!! GGTGTTACCGGCTTGGGGGC+CGG - chr1_4:56777943-56777962 Msa0171920:CDS 70.0%
!! GTTACCGGCTTGGGGGCCGG+TGG - chr1_4:56777946-56777965 Msa0171920:CDS 75.0%
!! GTTACCGGCTTGGGGGCCGG+TGG - chr1_4:56777946-56777965 Msa0171920:CDS 75.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 56776942 56778270 56776942 ID=Msa0171920;Name=Msa0171920
chr1_4 mRNA 56776942 56778270 56776942 ID=Msa0171920-mRNA-1;Parent=Msa0171920;Name=Msa0171920-mRNA-1;_AED=0.36;_eAED=0.36;_QI=0|-1|0|1|-1|1|1|0|442
chr1_4 exon 56776942 56778270 56776942 ID=Msa0171920-mRNA-1:exon:17302;Parent=Msa0171920-mRNA-1
chr1_4 CDS 56776942 56778270 56776942 ID=Msa0171920-mRNA-1:cds;Parent=Msa0171920-mRNA-1
Gene Sequence

>Msa0171920

ATGCTTTCACCATGTATCAGTTCTGTAAACACTCTAAATCTAAAATTTCTCAATATCTCACCCTCTTCCTCCAATCTCAACCGTTCTTATTACCGCCTTAAATCAATCTCAGCCGTCCTCAACAACCCTTCATCACACAGCAAAAAACAACAAGTACAACAACCACAGAAACAACTATACCAACCCTTCCGGCCACCACCAACACCTCTCCCATCAAAATACGACAACCTCGACATCCCAGGTCGCATCGACATCCTCGCCAACCGTCTCGGTGCATGGCACGAATACGCTCCTCTCATCACTTCCCTCCTCCGTGAAGGCTTTTCACCTCCCACCATTGAAGAAACCACCGGCATCACCGGCGTTGAACAGAATCGTATCATAGTTGCAACTAAAGTTCGTGACACTCTTGTACAGGCCAACACTGATGAAGAAATTCTCTCTTACTTTGATAGCGGTGGTGCCGAAGTTTTATACGAAATTCGTCTCCTCTCCACTTCGCAACGCGCTGCAGCAGCGCGTTTCATTGTGGAGAAGAGATATGATGGTAAAGGGGCTCAAGATCTAGCTCGTTCGATAAAGGATTTTCCTAGTAGACGCGGTGAAAAAAATTGGGAGAGTTTTGATTATCATCTCCCGGGAGATTGTCTTGCTTATTTGTATTACAGACAAAGTAAGGAACATAAGAATCCTTCTGATCCAAGAACTGCTTTTCTTGAACAAGCGTTGACTGCTGTAGAGTCTGATAAAGCTAGAAAAGTGATTTTGGAGGAGTTGAGTGGGAAGGCTGAAGAGGAGGAGGTTGAAGATGTTGTATTAAAAGTGCCTGTTAATGTGGTGAGATTGAAGATTGGTGAAGTAGCTGAGGCGACTTCAGTGGTTGTTTTGCCGGTGTGTAAAGCTGAGGAAGGAGAAAGGGTGATTATGGAAGCACCTTTTGAGATTAAAAAGGAAGGTGAGTTTGGTATTGTGGTGGCGGAGAAAGGGTGGGAGAAATGGGTGGTGTTACCGGCTTGGGGGCCGGTGGTTAATTTAGGGAAAGGCGTTGTTGTGTCGTTTTTGGATGCTAGAGTTTTACCATGGAAGGCTAATAGGTGGTATAAGGAAGAGCCTATTTTGGTGGTTGCTGATAGGAGTAAGAGGGAGGTGGAGAATGATGATGGGCTCTATTTGGTAAAAGATGATGGTAATGATGTTGGTTTAAAGGTTCAAAGGGGTTCGATTTTGAAGGAAATGGGTGTTAACGAGTGTTTAGGGAATGTAGTTATTGTTGTTAGGCCACCTACTGAAAATGATGGTGATATGTTGAGTGAAGAAGTTTGGGACTGA

Protein sequence

>Msa0171920

MLSPCISSVNTLNLKFLNISPSSSNLNRSYYRLKSISAVLNNPSSHSKKQQVQQPQKQLYQPFRPPPTPLPSKYDNLDIPGRIDILANRLGAWHEYAPLITSLLREGFSPPTIEETTGITGVEQNRIIVATKVRDTLVQANTDEEILSYFDSGGAEVLYEIRLLSTSQRAAAARFIVEKRYDGKGAQDLARSIKDFPSRRGEKNWESFDYHLPGDCLAYLYYRQSKEHKNPSDPRTAFLEQALTAVESDKARKVILEELSGKAEEEEVEDVVLKVPVNVVRLKIGEVAEATSVVVLPVCKAEEGERVIMEAPFEIKKEGEFGIVVAEKGWEKWVVLPAWGPVVNLGKGVVVSFLDARVLPWKANRWYKEEPILVVADRSKREVENDDGLYLVKDDGNDVGLKVQRGSILKEMGVNECLGNVVIVVRPPTENDGDMLSEEVWD*