Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0883630 | XP_003601499.1 | 76.957 | 230 | 51 | 2 | 19 | 247 | 1 | 229 | 1.98e-128 | 373 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0883630 | sp|P25773|CATL1_FELCA | 28.767 | 219 | 137 | 7 | 16 | 228 | 111 | 316 | 6.03e-19 | 87.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0883630 | G7J853 | 76.957 | 230 | 51 | 2 | 19 | 247 | 1 | 229 | 9.45e-129 | 373 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0512300 | Msa0883630 | 0.969739 | 1.441211e-130 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0883630 | MtrunA17_Chr3g0120601 | 76.957 | 230 | 51 | 2 | 19 | 247 | 1 | 229 | 1.82e-132 | 373 |
| Msa0883630 | MtrunA17_Chr4g0040881 | 27.897 | 233 | 142 | 8 | 10 | 232 | 119 | 335 | 2.27e-19 | 85.9 |
| Msa0883630 | MtrunA17_Chr4g0041061 | 27.897 | 233 | 142 | 8 | 10 | 232 | 119 | 335 | 2.63e-19 | 85.5 |
| Msa0883630 | MtrunA17_Chr4g0041081 | 26.180 | 233 | 146 | 7 | 10 | 232 | 119 | 335 | 4.98e-18 | 82.0 |
| Msa0883630 | MtrunA17_Chr4g0060251 | 26.860 | 242 | 149 | 10 | 3 | 232 | 110 | 335 | 7.46e-18 | 81.6 |
| Msa0883630 | MtrunA17_Chr5g0405751 | 27.313 | 227 | 142 | 8 | 3 | 222 | 109 | 319 | 1.55e-17 | 80.5 |
| Msa0883630 | MtrunA17_Chr7g0248811 | 28.444 | 225 | 134 | 9 | 17 | 232 | 120 | 326 | 3.42e-17 | 79.7 |
| Msa0883630 | MtrunA17_Chr4g0024411 | 27.397 | 219 | 137 | 7 | 10 | 222 | 116 | 318 | 3.72e-17 | 79.3 |
| Msa0883630 | MtrunA17_Chr4g0040851 | 27.753 | 227 | 135 | 8 | 17 | 232 | 142 | 350 | 1.20e-15 | 75.5 |
| Msa0883630 | MtrunA17_Chr2g0283671 | 29.767 | 215 | 124 | 8 | 17 | 225 | 13 | 206 | 1.85e-15 | 73.2 |
| Msa0883630 | MtrunA17_Chr4g0041521 | 26.316 | 247 | 134 | 9 | 7 | 232 | 111 | 330 | 3.12e-15 | 73.9 |
| Msa0883630 | MtrunA17_Chr3g0121021 | 36.471 | 85 | 47 | 3 | 142 | 226 | 37 | 114 | 4.56e-14 | 67.4 |
| Msa0883630 | MtrunA17_Chr2g0319991 | 26.606 | 218 | 139 | 7 | 17 | 229 | 125 | 326 | 1.09e-12 | 66.6 |
| Msa0883630 | MtrunA17_Chr4g0070441 | 27.523 | 218 | 138 | 8 | 23 | 234 | 138 | 341 | 1.76e-12 | 66.2 |
| Msa0883630 | MtrunA17_Chr2g0325121 | 26.168 | 214 | 132 | 9 | 22 | 228 | 124 | 318 | 2.01e-12 | 65.9 |
| Msa0883630 | MtrunA17_Chr0c27g0493921 | 27.778 | 216 | 136 | 8 | 23 | 232 | 138 | 339 | 2.15e-12 | 65.9 |
| Msa0883630 | MtrunA17_Chr2g0315491 | 25.664 | 226 | 142 | 7 | 17 | 232 | 122 | 331 | 4.73e-12 | 64.7 |
| Msa0883630 | MtrunA17_Chr3g0134231 | 28.837 | 215 | 124 | 10 | 23 | 229 | 150 | 343 | 1.64e-11 | 63.5 |
| Msa0883630 | MtrunA17_Chr2g0311381 | 23.810 | 210 | 139 | 7 | 20 | 226 | 138 | 329 | 1.94e-11 | 63.2 |
| Msa0883630 | MtrunA17_Chr4g0053311 | 27.982 | 218 | 122 | 10 | 23 | 229 | 130 | 323 | 3.33e-11 | 62.4 |
| Msa0883630 | MtrunA17_Chr1g0199131 | 26.724 | 232 | 144 | 12 | 20 | 237 | 143 | 362 | 4.63e-11 | 62.0 |
| Msa0883630 | MtrunA17_Chr1g0208261 | 28.111 | 217 | 131 | 11 | 20 | 230 | 181 | 378 | 6.62e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0883630 | AT1G29080.1 | 30.000 | 220 | 126 | 9 | 23 | 232 | 135 | 336 | 3.18e-16 | 77.4 |
| Msa0883630 | AT4G36880.1 | 28.384 | 229 | 139 | 9 | 9 | 231 | 136 | 345 | 3.32e-14 | 71.6 |
| Msa0883630 | AT1G06260.1 | 26.389 | 216 | 132 | 7 | 17 | 225 | 126 | 321 | 8.17e-14 | 70.5 |
| Msa0883630 | AT3G48340.1 | 28.638 | 213 | 127 | 9 | 23 | 229 | 133 | 326 | 3.66e-13 | 68.6 |
| Msa0883630 | AT2G27420.1 | 26.407 | 231 | 136 | 11 | 17 | 232 | 127 | 338 | 1.71e-12 | 66.6 |
| Msa0883630 | AT2G21430.1 | 26.180 | 233 | 144 | 11 | 20 | 237 | 134 | 353 | 2.18e-12 | 66.2 |
| Msa0883630 | AT3G45310.1 | 27.004 | 237 | 151 | 8 | 3 | 232 | 126 | 347 | 3.24e-12 | 65.9 |
| Msa0883630 | AT5G45890.1 | 27.273 | 220 | 132 | 10 | 23 | 232 | 135 | 336 | 5.79e-12 | 65.1 |
| Msa0883630 | AT3G45310.2 | 26.407 | 231 | 149 | 7 | 3 | 227 | 126 | 341 | 1.46e-11 | 63.9 |
| Msa0883630 | AT3G19390.1 | 30.088 | 226 | 124 | 12 | 15 | 229 | 126 | 328 | 2.29e-11 | 63.5 |
| Msa0883630 | AT5G43060.1 | 28.959 | 221 | 122 | 11 | 20 | 229 | 140 | 336 | 9.72e-11 | 61.6 |
Find 89 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACTTTCACCTCAAGATATT+TGG | 0.091163 | 6_1:-35055268 | Msa0883630:CDS |
| AGCCTTCACCATGGCTATTT+TGG | 0.110748 | 6_1:+35053847 | None:intergenic |
| GCCTTACTTGTGATTGGTTT+CGG | 0.287089 | 6_1:-35053915 | Msa0883630:CDS |
| TGACCCTTCATCTTTCTAAA+TGG | 0.294917 | 6_1:+35054192 | None:intergenic |
| GTCAAGACCTTCAAATTTAG+AGG | 0.316229 | 6_1:+35056762 | None:intergenic |
| AGGGAAAGCTGGTGGAATAT+TGG | 0.316333 | 6_1:-35053875 | Msa0883630:CDS |
| ACTTTCACCTCAAGATATTT+GGG | 0.339917 | 6_1:-35055267 | Msa0883630:CDS |
| ATGGTTTCTCATCCAGTTAT+AGG | 0.348514 | 6_1:+35055190 | None:intergenic |
| GATCATGCCTTACTTGTGAT+TGG | 0.351517 | 6_1:-35053921 | Msa0883630:CDS |
| CACTTACTGATGCCTATAAC+TGG | 0.366175 | 6_1:-35055202 | Msa0883630:CDS |
| CCTGATGACTGGCTCCTAAC+GGG | 0.370747 | 6_1:+35056697 | None:intergenic |
| TCAAGATATTTGGGACAATC+TGG | 0.374553 | 6_1:-35055258 | Msa0883630:CDS |
| GACCACACCTCTAAATTTGA+AGG | 0.381254 | 6_1:-35056769 | Msa0883630:CDS |
| TAGATTCGATTTGCGGGATA+CGG | 0.386125 | 6_1:-35056731 | Msa0883630:CDS |
| GGTAATGAGCGACTAATATA+TGG | 0.401750 | 6_1:-35053780 | Msa0883630:CDS |
| AAAGATGAAGGGTCATCTAA+TGG | 0.426610 | 6_1:-35054184 | Msa0883630:CDS |
| CGGATCTGAGAGGACGGTTG+AGG | 0.442911 | 6_1:-35053895 | Msa0883630:CDS |
| GACGGGATGAGAAAGTTTAG+AGG | 0.444258 | 6_1:-35054126 | Msa0883630:CDS |
| GATGGATAGATTCGATTTGC+GGG | 0.444813 | 6_1:-35056737 | Msa0883630:CDS |
| CATGATATCCATGTTGAACT+TGG | 0.447673 | 6_1:+35053806 | None:intergenic |
| AAAATAGCCATGGTGAAGGC+TGG | 0.455443 | 6_1:-35053845 | Msa0883630:CDS |
| AGATTCGATTTGCGGGATAC+GGG | 0.469086 | 6_1:-35056730 | Msa0883630:CDS |
| GGTCCAAGGACTCCTCTATA+CGG | 0.475083 | 6_1:+35055143 | None:intergenic |
| GGTGAAGGCTGGGGAATGGA+TGG | 0.476327 | 6_1:-35053834 | Msa0883630:CDS |
| GGATCTGAGAGGACGGTTGA+GGG | 0.477043 | 6_1:-35053894 | Msa0883630:CDS |
| CCCGTTAGGAGCCAGTCATC+AGG | 0.478212 | 6_1:-35056697 | Msa0883630:CDS |
| AACAAAGGGGTGTGAATCCT+CGG | 0.481738 | 6_1:-35055295 | Msa0883630:CDS |
| TTATAGGATGGGATTTATAA+CGG | 0.485004 | 6_1:-35053993 | Msa0883630:intron |
| GTTCTTGTATCACAAACAAA+GGG | 0.489907 | 6_1:-35055309 | Msa0883630:CDS |
| TCCGAAACCAATCACAAGTA+AGG | 0.499592 | 6_1:+35053914 | None:intergenic |
| TCCTGATGACTGGCTCCTAA+CGG | 0.502752 | 6_1:+35056696 | None:intergenic |
| AAATAGCCATGGTGAAGGCT+GGG | 0.508217 | 6_1:-35053844 | Msa0883630:CDS |
| GGTACCATTTAGAAAGATGA+AGG | 0.509153 | 6_1:-35054196 | Msa0883630:CDS |
| GAGGAGTCATGGCCGTATAG+AGG | 0.510826 | 6_1:-35055155 | Msa0883630:CDS |
| GACCTTCAAATTTAGAGGTG+TGG | 0.511270 | 6_1:+35056767 | None:intergenic |
| ATTTGAAGGTCTTGACGTGA+TGG | 0.521921 | 6_1:-35056755 | Msa0883630:CDS |
| CCATGGTGAAGGCTGGGGAA+TGG | 0.523082 | 6_1:-35053838 | Msa0883630:CDS |
| TGGCCGTATAGAGGAGTCCT+TGG | 0.530116 | 6_1:-35055146 | Msa0883630:CDS |
| ATACTTACCTTCCTGATGAC+TGG | 0.532672 | 6_1:+35056686 | None:intergenic |
| TGATGGATAGATTCGATTTG+CGG | 0.532687 | 6_1:-35056738 | Msa0883630:CDS |
| TACCGGTGAAGTGGATTGAC+GGG | 0.533086 | 6_1:-35054143 | Msa0883630:CDS |
| GGTGTGTTCTCGAGGAGTCA+TGG | 0.542918 | 6_1:-35055166 | Msa0883630:CDS |
| ACAAATGCACTAGCTTGTGT+TGG | 0.543645 | 6_1:+35053969 | None:intergenic |
| CAGTAAGTGTCCTACCATCA+TGG | 0.545971 | 6_1:+35055216 | None:intergenic |
| TGAAGGACCTATCGCCGTAC+CGG | 0.553269 | 6_1:-35054160 | Msa0883630:CDS |
| CTTTCCTCCTTGTGCTGCTG+TGG | 0.553959 | 6_1:-35055333 | Msa0883630:CDS |
| GTCAATCCACTTCACCGGTA+CGG | 0.559616 | 6_1:+35054146 | None:intergenic |
| CACAGCAGCACAAGGAGGAA+AGG | 0.559784 | 6_1:+35055334 | None:intergenic |
| ACCACCACCTCAAAACCGTC+AGG | 0.559788 | 6_1:-35055123 | Msa0883630:intron |
| TAGTATCAACTAATCAGCAC+AGG | 0.560943 | 6_1:+35053747 | None:intergenic |
| CACTTCACCGGTACGGCGAT+AGG | 0.562452 | 6_1:+35054153 | None:intergenic |
| ATCCCGTCAATCCACTTCAC+CGG | 0.563017 | 6_1:+35054141 | None:intergenic |
| CTATCGCCGTACCGGTGAAG+TGG | 0.566204 | 6_1:-35054152 | Msa0883630:CDS |
| AATAGCCATGGTGAAGGCTG+GGG | 0.568716 | 6_1:-35053843 | Msa0883630:CDS |
| AAGGGTCATCTAATGGATGA+AGG | 0.570470 | 6_1:-35054177 | Msa0883630:CDS |
| CTGATGACTGGCTCCTAACG+GGG | 0.573191 | 6_1:+35056698 | None:intergenic |
| AAACCATGGGTGTGTTCTCG+AGG | 0.579121 | 6_1:-35055174 | Msa0883630:CDS |
| AATGAAGAGCAGAACCATGA+TGG | 0.580938 | 6_1:-35055230 | Msa0883630:CDS |
| AACACAGCAACCAATCATGT+GGG | 0.583455 | 6_1:-35053945 | Msa0883630:CDS |
| TGGTTTCGGATCTGAGAGGA+CGG | 0.584689 | 6_1:-35053901 | Msa0883630:CDS |
| GAGGACGGTTGAGGGAAAGC+TGG | 0.586987 | 6_1:-35053886 | Msa0883630:CDS |
| GACGGTTGAGGGAAAGCTGG+TGG | 0.598316 | 6_1:-35053883 | Msa0883630:CDS |
| AGTTCTTGTATCACAAACAA+AGG | 0.601284 | 6_1:-35055310 | Msa0883630:CDS |
| GTACCGGTGAAGTGGATTGA+CGG | 0.602026 | 6_1:-35054144 | Msa0883630:CDS |
| GTCCAAAATAGCCATGGTGA+AGG | 0.603456 | 6_1:-35053849 | Msa0883630:CDS |
| AAGAGCAGAACCATGATGGT+AGG | 0.617675 | 6_1:-35055226 | Msa0883630:CDS |
| TGGATTGTCCAAAATAGCCA+TGG | 0.626284 | 6_1:-35053855 | Msa0883630:CDS |
| TTAGCATTACAAGGTGTACG+TGG | 0.627813 | 6_1:-35054218 | Msa0883630:CDS |
| AAACACAGCAACCAATCATG+TGG | 0.628207 | 6_1:-35053946 | Msa0883630:CDS |
| TGGATATGCCAAGTTCAACA+TGG | 0.639324 | 6_1:-35053814 | Msa0883630:CDS |
| AGATTGTCCCAAATATCTTG+AGG | 0.640127 | 6_1:+35055260 | None:intergenic |
| AAGAACTCCACAGCAGCACA+AGG | 0.645764 | 6_1:+35055326 | None:intergenic |
| TTCAACATGGATATCATGTG+TGG | 0.647455 | 6_1:-35053801 | Msa0883630:CDS |
| ATAACTGGATGAGAAACCAT+GGG | 0.658279 | 6_1:-35055187 | Msa0883630:CDS |
| AGTATCAACTAATCAGCACA+GGG | 0.661895 | 6_1:+35053748 | None:intergenic |
| TGAGGTGAAAGTAGAATCCG+AGG | 0.665361 | 6_1:+35055278 | None:intergenic |
| CCATTCCCCAGCCTTCACCA+TGG | 0.666001 | 6_1:+35053838 | None:intergenic |
| TATAACTGGATGAGAAACCA+TGG | 0.667415 | 6_1:-35055188 | Msa0883630:CDS |
| ACACAGCAACCAATCATGTG+GGG | 0.668366 | 6_1:-35053944 | Msa0883630:CDS |
| CACAGCAACCAATCATGTGG+GGG | 0.671987 | 6_1:-35053943 | Msa0883630:CDS |
| TGATTGGTTTCGGATCTGAG+AGG | 0.677886 | 6_1:-35053905 | Msa0883630:CDS |
| AATGAGCGACTAATATATGG+AGG | 0.677975 | 6_1:-35053777 | Msa0883630:CDS |
| TAGCATTACAAGGTGTACGT+GGG | 0.683474 | 6_1:-35054217 | Msa0883630:CDS |
| GTACCATTTAGAAAGATGAA+GGG | 0.685091 | 6_1:-35054195 | Msa0883630:CDS |
| ACTCCTCGAGAACACACCCA+TGG | 0.685353 | 6_1:+35055171 | None:intergenic |
| AACTCCACAGCAGCACAAGG+AGG | 0.712937 | 6_1:+35055329 | None:intergenic |
| TTAGGAGCCAGTCATCAGGA+AGG | 0.713074 | 6_1:-35056693 | Msa0883630:intron |
| TTCTTGTATCACAAACAAAG+GGG | 0.726196 | 6_1:-35055308 | Msa0883630:CDS |
| GTATCAACTAATCAGCACAG+GGG | 0.831637 | 6_1:+35053749 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTAATTAAATTTAA+CGG | - | chr6_1:35055010-35055029 | Msa0883630:intron | 0.0% |
| !!! | GCTAAATTTTTATTTTTATT+AGG | - | chr6_1:35053891-35053910 | Msa0883630:CDS | 10.0% |
| !! | ATAATTCAAAATTTAGTTAA+GGG | + | chr6_1:35055076-35055095 | None:intergenic | 10.0% |
| !! | AATAATTCAAAATTTAGTTA+AGG | + | chr6_1:35055075-35055094 | None:intergenic | 10.0% |
| !!! | GCTAAATTTTTATTTTTATT+AGG | - | chr6_1:35053891-35053910 | Msa0883630:CDS | 10.0% |
| !! | ATAATTCAAAATTTAGTTAA+GGG | + | chr6_1:35055076-35055095 | None:intergenic | 10.0% |
| !! | AATAATTCAAAATTTAGTTA+AGG | + | chr6_1:35055075-35055094 | None:intergenic | 10.0% |
| !!! | CGTTTTTTAATTAAATTTAA+CGG | + | chr6_1:35054191-35054210 | None:intergenic | 10.0% |
| !! | AAATTTAATTAAAAAACGTT+AGG | - | chr6_1:35054193-35054212 | Msa0883630:CDS | 10.0% |
| !! | AATTTAATTAAAAAACGTTA+GGG | - | chr6_1:35054194-35054213 | Msa0883630:CDS | 10.0% |
| !!! | AACTAAATTTTGAATTATTT+TGG | + | chr6_1:35053968-35053987 | None:intergenic | 10.0% |
| !! | AATAATTCAAAATTTAGTTA+AGG | - | chr6_1:35055075-35055094 | Msa0883630:intron | 10.0% |
| !! | TTTGAACTATAATAATAAAA+AGG | + | chr6_1:35055151-35055170 | None:intergenic | 10.0% |
| !!! | AAATTATAGTGATTATTTTT+AGG | - | chr6_1:35055841-35055860 | Msa0883630:intron | 10.0% |
| !! | AATCACTATAATAATAATTA+AGG | + | chr6_1:35055957-35055976 | None:intergenic | 10.0% |
| !!! | AATTGAATAAATTTTTTCTA+AGG | - | chr6_1:35056035-35056054 | Msa0883630:intron | 10.0% |
| !!! | TTTTTTATTTAACTTATTGT+AGG | - | chr6_1:35056295-35056314 | Msa0883630:intron | 10.0% |
| !!! | ATTAACTATTTAATTGGTTT+CGG | - | chr6_1:35053934-35053953 | Msa0883630:CDS | 15.0% |
| !!! | ATTAACTATTTAATTGGTTT+CGG | - | chr6_1:35053934-35053953 | Msa0883630:CDS | 15.0% |
| !!! | ATGATTATGATTTTTGTTTA+TGG | - | chr6_1:35054805-35054824 | Msa0883630:intron | 15.0% |
| !!! | ATGGTTTTTGTTATAAAATT+TGG | - | chr6_1:35054888-35054907 | Msa0883630:intron | 15.0% |
| !! | TTTAATTAAATTTAACGGAA+AGG | - | chr6_1:35055015-35055034 | Msa0883630:intron | 15.0% |
| !! | GTAAAAAAATTACTATATGA+TGG | - | chr6_1:35055573-35055592 | Msa0883630:intron | 15.0% |
| !! | ATTTATTAGACATTCAATTA+TGG | - | chr6_1:35055708-35055727 | Msa0883630:intron | 15.0% |
| !! | CAACAAATATTTAAAAAAGT+TGG | + | chr6_1:35055764-35055783 | None:intergenic | 15.0% |
| !!! | TTTGATTTACATTTCATATA+AGG | - | chr6_1:35055816-35055835 | Msa0883630:intron | 15.0% |
| !! | ATCTATAGATTTCATATATT+TGG | - | chr6_1:35056104-35056123 | Msa0883630:intron | 15.0% |
| !!! | TATTTTTGCCTATTTTTTAT+TGG | - | chr6_1:35056257-35056276 | Msa0883630:intron | 15.0% |
| !!! | TTTTTCGTTTTTACAATTAT+AGG | - | chr6_1:35056533-35056552 | Msa0883630:intron | 15.0% |
| !!! | ATTAGGCTAAATTACATTTT+TGG | - | chr6_1:35053908-35053927 | Msa0883630:CDS | 20.0% |
| !! | GAAACCAATTAAATAGTTAA+TGG | + | chr6_1:35055107-35055126 | None:intergenic | 20.0% |
| !! | GCAATGTTAGATAAATTTAA+CGG | + | chr6_1:35054032-35054051 | None:intergenic | 20.0% |
| !! | GAAACCAATTAAATAGTTAA+TGG | + | chr6_1:35055107-35055126 | None:intergenic | 20.0% |
| !!! | GATTTTTTGAAATGATTTGA+TGG | + | chr6_1:35054445-35054464 | None:intergenic | 20.0% |
| !!! | ATGATTTTTGTTTATGGTTT+TGG | - | chr6_1:35054811-35054830 | Msa0883630:intron | 20.0% |
| !! | AATTTGTATGGAAAAGATAT+TGG | - | chr6_1:35054834-35054853 | Msa0883630:intron | 20.0% |
| !! | ATTTGTATGGAAAAGATATT+GGG | - | chr6_1:35054835-35054854 | Msa0883630:intron | 20.0% |
| !!! | GAAATGATTTTTCTTGTTTA+TGG | - | chr6_1:35054869-35054888 | Msa0883630:intron | 20.0% |
| !!! | TATTTTTGTTTATGAAGTTC+TGG | - | chr6_1:35054914-35054933 | Msa0883630:intron | 20.0% |
| !!! | ATTTTTGTTTATGAAGTTCT+GGG | - | chr6_1:35054915-35054934 | Msa0883630:intron | 20.0% |
| !!! | TATGAATTTTATGAGTTTCT+GGG | - | chr6_1:35054944-35054963 | Msa0883630:intron | 20.0% |
| !!! | CTTAACTATTTAATTGGTTT+CGG | + | chr6_1:35055108-35055127 | None:intergenic | 20.0% |
| !! | GAAACCAATTAAATAGTTAA+GGG | - | chr6_1:35055107-35055126 | Msa0883630:intron | 20.0% |
| !!! | AAAAGGCTAAATTACTTTTT+TGG | + | chr6_1:35055134-35055153 | None:intergenic | 20.0% |
| !!! | TGAAGAATAGATTCTTTTTT+GGG | + | chr6_1:35055458-35055477 | None:intergenic | 20.0% |
| !!! | TTGAAGAATAGATTCTTTTT+TGG | + | chr6_1:35055459-35055478 | None:intergenic | 20.0% |
| !! | GTAGCTCAATATTTATTATT+TGG | + | chr6_1:35055511-35055530 | None:intergenic | 20.0% |
| !!! | TAGTGATTATTTTTAGGTAT+TGG | - | chr6_1:35055847-35055866 | Msa0883630:intron | 20.0% |
| !!! | ATTTTTAAGTTAAGTTCGTA+AGG | - | chr6_1:35055914-35055933 | Msa0883630:intron | 20.0% |
| !! | AAAAAGAAAATATTGAAGGA+TGG | + | chr6_1:35056213-35056232 | None:intergenic | 20.0% |
| !!! | TCCTTCAATATTTTCTTTTT+TGG | - | chr6_1:35056213-35056232 | Msa0883630:intron | 20.0% |
| !!! | CCTTCAATATTTTCTTTTTT+GGG | - | chr6_1:35056214-35056233 | Msa0883630:intron | 20.0% |
| !! | AAACTCAACCAATAAAAAAT+AGG | + | chr6_1:35056268-35056287 | None:intergenic | 20.0% |
| ! | TGGTCCATTAACTATTTAAT+TGG | - | chr6_1:35053928-35053947 | Msa0883630:CDS | 25.0% |
| !! | TTTCTATCTGCTACATATTT+TGG | - | chr6_1:35054000-35054019 | Msa0883630:intron | 25.0% |
| !! | ATTAGGCTAAATTACCTTTT+TGG | - | chr6_1:35054067-35054086 | Msa0883630:intron | 25.0% |
| !! | AAATAGTTAATGGACCAAAA+AGG | + | chr6_1:35053925-35053944 | None:intergenic | 25.0% |
| ! | TGGTCCATTAACTATTTAAT+TGG | - | chr6_1:35053928-35053947 | Msa0883630:CDS | 25.0% |
| ! | TAATGAAGATGATGAAGATA+AGG | + | chr6_1:35054295-35054314 | None:intergenic | 25.0% |
| !! | TTGTTGTTGAAATTGAGATT+GGG | + | chr6_1:35054417-35054436 | None:intergenic | 25.0% |
| !! | ATTTGAGAAAGAAATTTTGC+TGG | + | chr6_1:35054495-35054514 | None:intergenic | 25.0% |
| !!! | TTATGGTTTTGGAATTTGTA+TGG | - | chr6_1:35054822-35054841 | Msa0883630:intron | 25.0% |
| !! | GTATGAATTTTATGAGTTTC+TGG | - | chr6_1:35054943-35054962 | Msa0883630:intron | 25.0% |
| ! | CGAAACCAATTAAATAGTTA+AGG | - | chr6_1:35055106-35055125 | Msa0883630:intron | 25.0% |
| ! | AGAATCTATTCTTCAATTTG+TGG | - | chr6_1:35055463-35055482 | Msa0883630:intron | 25.0% |
| !!! | TTTAGGTATTGGTTAACTTT+TGG | - | chr6_1:35055858-35055877 | Msa0883630:intron | 25.0% |
| ! | CCCAAAAAAGAAAATATTGA+AGG | + | chr6_1:35056217-35056236 | None:intergenic | 25.0% |
| !!! | TCGTTTTTACAATTATAGGA+TGG | - | chr6_1:35056537-35056556 | Msa0883630:intron | 25.0% |
| !! | CGTTTTTACAATTATAGGAT+GGG | - | chr6_1:35056538-35056557 | Msa0883630:intron | 25.0% |
| ! | TTATAGGATGGGATTTATAA+CGG | - | chr6_1:35056549-35056568 | Msa0883630:intron | 25.0% |
| ! | CTATTTAATTGGTTTCGGTT+TGG | - | chr6_1:35053939-35053958 | Msa0883630:CDS | 30.0% |
| ! | CTATTTAATTGGTTTCGGTT+TGG | - | chr6_1:35053939-35053958 | Msa0883630:CDS | 30.0% |
| GAAAAGACCAAAATGTGTTA+CGG | + | chr6_1:35054169-35054188 | None:intergenic | 30.0% | |
| AAATTGAGATTGGGTATTTG+TGG | + | chr6_1:35054408-35054427 | None:intergenic | 30.0% | |
| ! | GTTGTTGTTGAAATTGAGAT+TGG | + | chr6_1:35054418-35054437 | None:intergenic | 30.0% |
| ! | AGAAATTTTGCTGGAATTGT+TGG | + | chr6_1:35054486-35054505 | None:intergenic | 30.0% |
| GGAAAATGGAAAAACGATTA+GGG | + | chr6_1:35054554-35054573 | None:intergenic | 30.0% | |
| ACACAACAAACACATCAATT+GGG | + | chr6_1:35054609-35054628 | None:intergenic | 30.0% | |
| AACACAACAAACACATCAAT+TGG | + | chr6_1:35054610-35054629 | None:intergenic | 30.0% | |
| !!! | TGCTTTGCTGTTTTTCTATT+TGG | - | chr6_1:35054725-35054744 | Msa0883630:intron | 30.0% |
| ! | CTATTTGGTCTTTGTACTTA+TGG | - | chr6_1:35054740-35054759 | Msa0883630:intron | 30.0% |
| ! | CTATTTAATTGGTTTCGGTT+TGG | + | chr6_1:35053939-35053958 | None:intergenic | 30.0% |
| TGGTCCCTTAACTATTTAAT+TGG | + | chr6_1:35055114-35055133 | None:intergenic | 30.0% | |
| AGTTCTTGTATCACAAACAA+AGG | - | chr6_1:35055232-35055251 | Msa0883630:CDS | 30.0% | |
| GTTCTTGTATCACAAACAAA+GGG | - | chr6_1:35055233-35055252 | Msa0883630:CDS | 30.0% | |
| TTCTTGTATCACAAACAAAG+GGG | - | chr6_1:35055234-35055253 | Msa0883630:CDS | 30.0% | |
| TACTTTCACCTCAAGATATT+TGG | - | chr6_1:35055274-35055293 | Msa0883630:CDS | 30.0% | |
| ACTTTCACCTCAAGATATTT+GGG | - | chr6_1:35055275-35055294 | Msa0883630:CDS | 30.0% | |
| AGTCTCAATAACGAGTTAAA+CGG | - | chr6_1:35055627-35055646 | Msa0883630:intron | 30.0% | |
| AATATTGAAGGATGGAAAAG+AGG | + | chr6_1:35056205-35056224 | None:intergenic | 30.0% | |
| !! | AGGTTCATTTTAGCATTACA+AGG | - | chr6_1:35056315-35056334 | Msa0883630:intron | 30.0% |
| GTACCATTTAGAAAGATGAA+GGG | - | chr6_1:35056347-35056366 | Msa0883630:intron | 30.0% | |
| GTCAAGACCTTCAAATTTAG+AGG | + | chr6_1:35053783-35053802 | None:intergenic | 35.0% | |
| ! | TGATGGATAGATTCGATTTG+CGG | - | chr6_1:35053804-35053823 | Msa0883630:CDS | 35.0% |
| TGTAGCAGATAGAAAGTCAA+GGG | + | chr6_1:35053995-35054014 | None:intergenic | 35.0% | |
| ATGTAGCAGATAGAAAGTCA+AGG | + | chr6_1:35053996-35054015 | None:intergenic | 35.0% | |
| TGTTACGGAGAGAAAGTTAA+GGG | + | chr6_1:35054154-35054173 | None:intergenic | 35.0% | |
| ! | TTTCTCTCCGTAACACATTT+TGG | - | chr6_1:35054159-35054178 | Msa0883630:CDS | 35.0% |
| ATGTCATAATGACACGTGTA+CGG | + | chr6_1:35054243-35054262 | None:intergenic | 35.0% | |
| ! | TACACGTGTCATTATGACAT+TGG | - | chr6_1:35054243-35054262 | Msa0883630:intron | 35.0% |
| GGGAAAATGGAAAAACGATT+AGG | + | chr6_1:35054555-35054574 | None:intergenic | 35.0% | |
| TCGATTAGGGTTGTTCAATT+GGG | + | chr6_1:35054576-35054595 | None:intergenic | 35.0% | |
| ATCGATTAGGGTTGTTCAAT+TGG | + | chr6_1:35054577-35054596 | None:intergenic | 35.0% | |
| CACAACAAACACATCAATTG+GGG | + | chr6_1:35054608-35054627 | None:intergenic | 35.0% | |
| GAAAAACAGCAAAGCAAATG+AGG | + | chr6_1:35054721-35054740 | None:intergenic | 35.0% | |
| GTCTTTGTACTTATGGTTCT+AGG | - | chr6_1:35054747-35054766 | Msa0883630:intron | 35.0% | |
| ! | TTCCTCTCTGTTACACATTT+TGG | + | chr6_1:35055042-35055061 | None:intergenic | 35.0% |
| TGTAACAGAGAGGAAGTTAA+GGG | - | chr6_1:35055047-35055066 | Msa0883630:intron | 35.0% | |
| AGATTGTCCCAAATATCTTG+AGG | + | chr6_1:35055285-35055304 | None:intergenic | 35.0% | |
| ! | TCAAGATATTTGGGACAATC+TGG | - | chr6_1:35055284-35055303 | Msa0883630:CDS | 35.0% |
| ATGGTTTCTCATCCAGTTAT+AGG | + | chr6_1:35055355-35055374 | None:intergenic | 35.0% | |
| TATAACTGGATGAGAAACCA+TGG | - | chr6_1:35055354-35055373 | Msa0883630:intron | 35.0% | |
| ATAACTGGATGAGAAACCAT+GGG | - | chr6_1:35055355-35055374 | Msa0883630:intron | 35.0% | |
| !! | AATTTTCGCTAGCTTCGTAA+AGG | - | chr6_1:35056168-35056187 | Msa0883630:intron | 35.0% |
| GGTACCATTTAGAAAGATGA+AGG | - | chr6_1:35056346-35056365 | Msa0883630:intron | 35.0% | |
| TGACCCTTCATCTTTCTAAA+TGG | + | chr6_1:35056353-35056372 | None:intergenic | 35.0% | |
| AAAGATGAAGGGTCATCTAA+TGG | - | chr6_1:35056358-35056377 | Msa0883630:intron | 35.0% | |
| CATGATATCCATGTTGAACT+TGG | + | chr6_1:35056739-35056758 | None:intergenic | 35.0% | |
| TTCAACATGGATATCATGTG+TGG | - | chr6_1:35056741-35056760 | Msa0883630:CDS | 35.0% | |
| GGTAATGAGCGACTAATATA+TGG | - | chr6_1:35056762-35056781 | Msa0883630:CDS | 35.0% | |
| AATGAGCGACTAATATATGG+AGG | - | chr6_1:35056765-35056784 | Msa0883630:CDS | 35.0% | |
| GACCACACCTCTAAATTTGA+AGG | - | chr6_1:35053773-35053792 | Msa0883630:CDS | 40.0% | |
| GACCTTCAAATTTAGAGGTG+TGG | + | chr6_1:35053778-35053797 | None:intergenic | 40.0% | |
| ATTTGAAGGTCTTGACGTGA+TGG | - | chr6_1:35053787-35053806 | Msa0883630:CDS | 40.0% | |
| ! | GATGGATAGATTCGATTTGC+GGG | - | chr6_1:35053805-35053824 | Msa0883630:CDS | 40.0% |
| ! | TAGATTCGATTTGCGGGATA+CGG | - | chr6_1:35053811-35053830 | Msa0883630:CDS | 40.0% |
| ATACTTACCTTCCTGATGAC+TGG | + | chr6_1:35053859-35053878 | None:intergenic | 40.0% | |
| GTGTTACGGAGAGAAAGTTA+AGG | + | chr6_1:35054155-35054174 | None:intergenic | 40.0% | |
| !! | TGTCATTATGACATTGGCTC+TGG | - | chr6_1:35054249-35054268 | Msa0883630:intron | 40.0% |
| GTTGTGAGAAGATGAAGATC+TGG | + | chr6_1:35054346-35054365 | None:intergenic | 40.0% | |
| ! | GAATTCGTTTTCCCCAATTC+TGG | - | chr6_1:35054526-35054545 | Msa0883630:intron | 40.0% |
| ACGATTAGGGTTCCAGAATT+GGG | + | chr6_1:35054541-35054560 | None:intergenic | 40.0% | |
| AACGATTAGGGTTCCAGAAT+TGG | + | chr6_1:35054542-35054561 | None:intergenic | 40.0% | |
| GGTTGTTCAATTGGGGAAAA+TGG | + | chr6_1:35054568-35054587 | None:intergenic | 40.0% | |
| CGATTAGGGTTGTTCAATTG+GGG | + | chr6_1:35054575-35054594 | None:intergenic | 40.0% | |
| GGGGAAAACGAAATCGATTA+GGG | + | chr6_1:35054589-35054608 | None:intergenic | 40.0% | |
| TGGGGAAAACGAAATCGATT+AGG | + | chr6_1:35054590-35054609 | None:intergenic | 40.0% | |
| ! | TTGAGAGTGTGATTTGTGTG+TGG | - | chr6_1:35054637-35054656 | Msa0883630:intron | 40.0% |
| !!! | TTTTCCTGTGTTTGCTGTCA+TGG | - | chr6_1:35054676-35054695 | Msa0883630:intron | 40.0% |
| GACCAAAATGTGTAACAGAG+AGG | - | chr6_1:35055037-35055056 | Msa0883630:intron | 40.0% | |
| GTGTAACAGAGAGGAAGTTA+AGG | - | chr6_1:35055046-35055065 | Msa0883630:intron | 40.0% | |
| AATGAAGAGCAGAACCATGA+TGG | - | chr6_1:35055312-35055331 | Msa0883630:CDS | 40.0% | |
| CACTTACTGATGCCTATAAC+TGG | - | chr6_1:35055340-35055359 | Msa0883630:CDS | 40.0% | |
| ! | TATGTTACCTGACGGTTTTG+AGG | + | chr6_1:35055429-35055448 | None:intergenic | 40.0% |
| GGTCTTGATATGTTACCTGA+CGG | + | chr6_1:35055437-35055456 | None:intergenic | 40.0% | |
| !! | TTTTCTTTACACCTGACTCG+TGG | - | chr6_1:35056141-35056160 | Msa0883630:intron | 40.0% |
| GAAAATTCTATCCACGAGTC+AGG | + | chr6_1:35056155-35056174 | None:intergenic | 40.0% | |
| GGATGGAAAAGAGGAAAAGA+TGG | + | chr6_1:35056196-35056215 | None:intergenic | 40.0% | |
| TTAGCATTACAAGGTGTACG+TGG | - | chr6_1:35056324-35056343 | Msa0883630:intron | 40.0% | |
| TAGCATTACAAGGTGTACGT+GGG | - | chr6_1:35056325-35056344 | Msa0883630:intron | 40.0% | |
| ! | AAGGGTCATCTAATGGATGA+AGG | - | chr6_1:35056365-35056384 | Msa0883630:intron | 40.0% |
| ! | ACAAATGCACTAGCTTGTGT+TGG | + | chr6_1:35056576-35056595 | None:intergenic | 40.0% |
| AAACACAGCAACCAATCATG+TGG | - | chr6_1:35056596-35056615 | Msa0883630:intron | 40.0% | |
| AACACAGCAACCAATCATGT+GGG | - | chr6_1:35056597-35056616 | Msa0883630:intron | 40.0% | |
| GATCATGCCTTACTTGTGAT+TGG | - | chr6_1:35056621-35056640 | Msa0883630:intron | 40.0% | |
| !! | GCCTTACTTGTGATTGGTTT+CGG | - | chr6_1:35056627-35056646 | Msa0883630:intron | 40.0% |
| TCCGAAACCAATCACAAGTA+AGG | + | chr6_1:35056631-35056650 | None:intergenic | 40.0% | |
| TGGATTGTCCAAAATAGCCA+TGG | - | chr6_1:35056687-35056706 | Msa0883630:intron | 40.0% | |
| TGGATATGCCAAGTTCAACA+TGG | - | chr6_1:35056728-35056747 | Msa0883630:CDS | 40.0% | |
| ! | AGATTCGATTTGCGGGATAC+GGG | - | chr6_1:35053812-35053831 | Msa0883630:CDS | 45.0% |
| !!! | CGGGTTTTTTAAACCCCGTT+AGG | - | chr6_1:35053831-35053850 | Msa0883630:CDS | 45.0% |
| CGATTAGGGTTCCAGAATTG+GGG | + | chr6_1:35054540-35054559 | None:intergenic | 45.0% | |
| ACATCCATGACAGCAAACAC+AGG | + | chr6_1:35054683-35054702 | None:intergenic | 45.0% | |
| !! | TGTGTTTGCTGTCATGGATG+TGG | - | chr6_1:35054682-35054701 | Msa0883630:intron | 45.0% |
| ! | AACAAAGGGGTGTGAATCCT+CGG | - | chr6_1:35055247-35055266 | Msa0883630:CDS | 45.0% |
| TGAGGTGAAAGTAGAATCCG+AGG | + | chr6_1:35055267-35055286 | None:intergenic | 45.0% | |
| AAGAGCAGAACCATGATGGT+AGG | - | chr6_1:35055316-35055335 | Msa0883630:CDS | 45.0% | |
| CAGTAAGTGTCCTACCATCA+TGG | + | chr6_1:35055329-35055348 | None:intergenic | 45.0% | |
| GACGGGATGAGAAAGTTTAG+AGG | - | chr6_1:35056416-35056435 | Msa0883630:intron | 45.0% | |
| ACACAGCAACCAATCATGTG+GGG | - | chr6_1:35056598-35056617 | Msa0883630:intron | 45.0% | |
| !! | TGATTGGTTTCGGATCTGAG+AGG | - | chr6_1:35056637-35056656 | Msa0883630:intron | 45.0% |
| AGGGAAAGCTGGTGGAATAT+TGG | - | chr6_1:35056667-35056686 | Msa0883630:intron | 45.0% | |
| GTCCAAAATAGCCATGGTGA+AGG | - | chr6_1:35056693-35056712 | Msa0883630:intron | 45.0% | |
| ! | AGCCTTCACCATGGCTATTT+TGG | + | chr6_1:35056698-35056717 | None:intergenic | 45.0% |
| AAAATAGCCATGGTGAAGGC+TGG | - | chr6_1:35056697-35056716 | Msa0883630:CDS | 45.0% | |
| AAATAGCCATGGTGAAGGCT+GGG | - | chr6_1:35056698-35056717 | Msa0883630:CDS | 45.0% | |
| !! | ATTTAATTAAAAAAATGTTA+GGG | + | chr6_1:35055006-35055025 | None:intergenic | 5.0% |
| !! | AATTTAATTAAAAAAATGTT+AGG | + | chr6_1:35055007-35055026 | None:intergenic | 5.0% |
| !!! | TCATAAATTATAAATTTTTT+AGG | + | chr6_1:35056067-35056086 | None:intergenic | 5.0% |
| ! | TCCTGATGACTGGCTCCTAA+CGG | + | chr6_1:35053849-35053868 | None:intergenic | 50.0% |
| TTAGGAGCCAGTCATCAGGA+AGG | - | chr6_1:35053849-35053868 | Msa0883630:CDS | 50.0% | |
| AAGAACTCCACAGCAGCACA+AGG | + | chr6_1:35055219-35055238 | None:intergenic | 50.0% | |
| AAACCATGGGTGTGTTCTCG+AGG | - | chr6_1:35055368-35055387 | Msa0883630:intron | 50.0% | |
| GGTCCAAGGACTCCTCTATA+CGG | + | chr6_1:35055402-35055421 | None:intergenic | 50.0% | |
| !!! | GTTACCTGACGGTTTTGAGG+TGG | + | chr6_1:35055426-35055445 | None:intergenic | 50.0% |
| GTCAATCCACTTCACCGGTA+CGG | + | chr6_1:35056399-35056418 | None:intergenic | 50.0% | |
| !! | GTACCGGTGAAGTGGATTGA+CGG | - | chr6_1:35056398-35056417 | Msa0883630:intron | 50.0% |
| !! | TACCGGTGAAGTGGATTGAC+GGG | - | chr6_1:35056399-35056418 | Msa0883630:intron | 50.0% |
| ATCCCGTCAATCCACTTCAC+CGG | + | chr6_1:35056404-35056423 | None:intergenic | 50.0% | |
| CACAGCAACCAATCATGTGG+GGG | - | chr6_1:35056599-35056618 | Msa0883630:intron | 50.0% | |
| TGGTTTCGGATCTGAGAGGA+CGG | - | chr6_1:35056641-35056660 | Msa0883630:intron | 50.0% | |
| AATAGCCATGGTGAAGGCTG+GGG | - | chr6_1:35056699-35056718 | Msa0883630:CDS | 50.0% | |
| ! | CTGATGACTGGCTCCTAACG+GGG | + | chr6_1:35053847-35053866 | None:intergenic | 55.0% |
| ! | CCTGATGACTGGCTCCTAAC+GGG | + | chr6_1:35053848-35053867 | None:intergenic | 55.0% |
| CACAGCAGCACAAGGAGGAA+AGG | + | chr6_1:35055211-35055230 | None:intergenic | 55.0% | |
| ! | CTTTCCTCCTTGTGCTGCTG+TGG | - | chr6_1:35055209-35055228 | Msa0883630:CDS | 55.0% |
| AACTCCACAGCAGCACAAGG+AGG | + | chr6_1:35055216-35055235 | None:intergenic | 55.0% | |
| ACTCCTCGAGAACACACCCA+TGG | + | chr6_1:35055374-35055393 | None:intergenic | 55.0% | |
| GGTGTGTTCTCGAGGAGTCA+TGG | - | chr6_1:35055376-35055395 | Msa0883630:intron | 55.0% | |
| GAGGAGTCATGGCCGTATAG+AGG | - | chr6_1:35055387-35055406 | Msa0883630:intron | 55.0% | |
| TGGCCGTATAGAGGAGTCCT+TGG | - | chr6_1:35055396-35055415 | Msa0883630:intron | 55.0% | |
| !!! | GGTTTTGAGGTGGTGGTCCA+AGG | + | chr6_1:35055416-35055435 | None:intergenic | 55.0% |
| ACCACCACCTCAAAACCGTC+AGG | - | chr6_1:35055419-35055438 | Msa0883630:intron | 55.0% | |
| !!! | ACCTGACGGTTTTGAGGTGG+TGG | + | chr6_1:35055423-35055442 | None:intergenic | 55.0% |
| TGAAGGACCTATCGCCGTAC+CGG | - | chr6_1:35056382-35056401 | Msa0883630:intron | 55.0% | |
| GGCATGATCCCCCACATGAT+TGG | + | chr6_1:35056610-35056629 | None:intergenic | 55.0% | |
| GGATCTGAGAGGACGGTTGA+GGG | - | chr6_1:35056648-35056667 | Msa0883630:intron | 55.0% | |
| CCCGTTAGGAGCCAGTCATC+AGG | - | chr6_1:35053845-35053864 | Msa0883630:CDS | 60.0% | |
| CACTTCACCGGTACGGCGAT+AGG | + | chr6_1:35056392-35056411 | None:intergenic | 60.0% | |
| ! | CTATCGCCGTACCGGTGAAG+TGG | - | chr6_1:35056390-35056409 | Msa0883630:intron | 60.0% |
| CGGATCTGAGAGGACGGTTG+AGG | - | chr6_1:35056647-35056666 | Msa0883630:intron | 60.0% | |
| GAGGACGGTTGAGGGAAAGC+TGG | - | chr6_1:35056656-35056675 | Msa0883630:intron | 60.0% | |
| GACGGTTGAGGGAAAGCTGG+TGG | - | chr6_1:35056659-35056678 | Msa0883630:intron | 60.0% | |
| CCATTCCCCAGCCTTCACCA+TGG | + | chr6_1:35056707-35056726 | None:intergenic | 60.0% | |
| CCATGGTGAAGGCTGGGGAA+TGG | - | chr6_1:35056704-35056723 | Msa0883630:CDS | 60.0% | |
| GGTGAAGGCTGGGGAATGGA+TGG | - | chr6_1:35056708-35056727 | Msa0883630:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 35053752 | 35056812 | 35053752 | ID=Msa0883630;Name=Msa0883630 |
| chr6_1 | mRNA | 35053752 | 35056812 | 35053752 | ID=Msa0883630-mRNA-1;Parent=Msa0883630;Name=Msa0883630-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0|0|0.75|1|1|4|0|247 |
| chr6_1 | exon | 35056694 | 35056812 | 35056694 | ID=Msa0883630-mRNA-1:exon:8481;Parent=Msa0883630-mRNA-1 |
| chr6_1 | exon | 35055124 | 35055367 | 35055124 | ID=Msa0883630-mRNA-1:exon:8480;Parent=Msa0883630-mRNA-1 |
| chr6_1 | exon | 35054125 | 35054247 | 35054125 | ID=Msa0883630-mRNA-1:exon:8479;Parent=Msa0883630-mRNA-1 |
| chr6_1 | exon | 35053752 | 35054009 | 35053752 | ID=Msa0883630-mRNA-1:exon:8478;Parent=Msa0883630-mRNA-1 |
| chr6_1 | CDS | 35056694 | 35056812 | 35056694 | ID=Msa0883630-mRNA-1:cds;Parent=Msa0883630-mRNA-1 |
| chr6_1 | CDS | 35055124 | 35055367 | 35055124 | ID=Msa0883630-mRNA-1:cds;Parent=Msa0883630-mRNA-1 |
| chr6_1 | CDS | 35054125 | 35054247 | 35054125 | ID=Msa0883630-mRNA-1:cds;Parent=Msa0883630-mRNA-1 |
| chr6_1 | CDS | 35053752 | 35054009 | 35053752 | ID=Msa0883630-mRNA-1:cds;Parent=Msa0883630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
