Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0512300 | XP_003601499.1 | 76.957 | 230 | 51 | 2 | 19 | 247 | 1 | 229 | 1.98e-128 | 373 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0512300 | sp|P25773|CATL1_FELCA | 28.767 | 219 | 137 | 7 | 16 | 228 | 111 | 316 | 6.03e-19 | 87.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0512300 | G7J853 | 76.957 | 230 | 51 | 2 | 19 | 247 | 1 | 229 | 9.45e-129 | 373 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0512300 | Msa0883630 | 0.969739 | 1.441211e-130 | -8.615850e-47 |
| Msa0512300 | Msa0896210 | 0.809903 | 1.502895e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0512300 | MtrunA17_Chr3g0120601 | 76.957 | 230 | 51 | 2 | 19 | 247 | 1 | 229 | 1.82e-132 | 373 |
| Msa0512300 | MtrunA17_Chr4g0040881 | 27.897 | 233 | 142 | 8 | 10 | 232 | 119 | 335 | 2.27e-19 | 85.9 |
| Msa0512300 | MtrunA17_Chr4g0041061 | 27.897 | 233 | 142 | 8 | 10 | 232 | 119 | 335 | 2.63e-19 | 85.5 |
| Msa0512300 | MtrunA17_Chr4g0041081 | 26.180 | 233 | 146 | 7 | 10 | 232 | 119 | 335 | 4.98e-18 | 82.0 |
| Msa0512300 | MtrunA17_Chr4g0060251 | 26.860 | 242 | 149 | 10 | 3 | 232 | 110 | 335 | 7.46e-18 | 81.6 |
| Msa0512300 | MtrunA17_Chr5g0405751 | 27.313 | 227 | 142 | 8 | 3 | 222 | 109 | 319 | 1.55e-17 | 80.5 |
| Msa0512300 | MtrunA17_Chr7g0248811 | 28.444 | 225 | 134 | 9 | 17 | 232 | 120 | 326 | 3.42e-17 | 79.7 |
| Msa0512300 | MtrunA17_Chr4g0024411 | 27.397 | 219 | 137 | 7 | 10 | 222 | 116 | 318 | 3.72e-17 | 79.3 |
| Msa0512300 | MtrunA17_Chr4g0040851 | 27.753 | 227 | 135 | 8 | 17 | 232 | 142 | 350 | 1.20e-15 | 75.5 |
| Msa0512300 | MtrunA17_Chr2g0283671 | 29.767 | 215 | 124 | 8 | 17 | 225 | 13 | 206 | 1.85e-15 | 73.2 |
| Msa0512300 | MtrunA17_Chr4g0041521 | 26.316 | 247 | 134 | 9 | 7 | 232 | 111 | 330 | 3.12e-15 | 73.9 |
| Msa0512300 | MtrunA17_Chr3g0121021 | 36.471 | 85 | 47 | 3 | 142 | 226 | 37 | 114 | 4.56e-14 | 67.4 |
| Msa0512300 | MtrunA17_Chr2g0319991 | 26.606 | 218 | 139 | 7 | 17 | 229 | 125 | 326 | 1.09e-12 | 66.6 |
| Msa0512300 | MtrunA17_Chr4g0070441 | 27.523 | 218 | 138 | 8 | 23 | 234 | 138 | 341 | 1.76e-12 | 66.2 |
| Msa0512300 | MtrunA17_Chr2g0325121 | 26.168 | 214 | 132 | 9 | 22 | 228 | 124 | 318 | 2.01e-12 | 65.9 |
| Msa0512300 | MtrunA17_Chr0c27g0493921 | 27.778 | 216 | 136 | 8 | 23 | 232 | 138 | 339 | 2.15e-12 | 65.9 |
| Msa0512300 | MtrunA17_Chr2g0315491 | 25.664 | 226 | 142 | 7 | 17 | 232 | 122 | 331 | 4.73e-12 | 64.7 |
| Msa0512300 | MtrunA17_Chr3g0134231 | 28.837 | 215 | 124 | 10 | 23 | 229 | 150 | 343 | 1.64e-11 | 63.5 |
| Msa0512300 | MtrunA17_Chr2g0311381 | 23.810 | 210 | 139 | 7 | 20 | 226 | 138 | 329 | 1.94e-11 | 63.2 |
| Msa0512300 | MtrunA17_Chr4g0053311 | 27.982 | 218 | 122 | 10 | 23 | 229 | 130 | 323 | 3.33e-11 | 62.4 |
| Msa0512300 | MtrunA17_Chr1g0199131 | 26.724 | 232 | 144 | 12 | 20 | 237 | 143 | 362 | 4.63e-11 | 62.0 |
| Msa0512300 | MtrunA17_Chr1g0208261 | 28.111 | 217 | 131 | 11 | 20 | 230 | 181 | 378 | 6.62e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0512300 | AT1G29080.1 | 30.000 | 220 | 126 | 9 | 23 | 232 | 135 | 336 | 3.18e-16 | 77.4 |
| Msa0512300 | AT4G36880.1 | 28.384 | 229 | 139 | 9 | 9 | 231 | 136 | 345 | 3.32e-14 | 71.6 |
| Msa0512300 | AT1G06260.1 | 26.389 | 216 | 132 | 7 | 17 | 225 | 126 | 321 | 8.17e-14 | 70.5 |
| Msa0512300 | AT3G48340.1 | 28.638 | 213 | 127 | 9 | 23 | 229 | 133 | 326 | 3.66e-13 | 68.6 |
| Msa0512300 | AT2G27420.1 | 26.407 | 231 | 136 | 11 | 17 | 232 | 127 | 338 | 1.71e-12 | 66.6 |
| Msa0512300 | AT2G21430.1 | 26.180 | 233 | 144 | 11 | 20 | 237 | 134 | 353 | 2.18e-12 | 66.2 |
| Msa0512300 | AT3G45310.1 | 27.004 | 237 | 151 | 8 | 3 | 232 | 126 | 347 | 3.24e-12 | 65.9 |
| Msa0512300 | AT5G45890.1 | 27.273 | 220 | 132 | 10 | 23 | 232 | 135 | 336 | 5.79e-12 | 65.1 |
| Msa0512300 | AT3G45310.2 | 26.407 | 231 | 149 | 7 | 3 | 227 | 126 | 341 | 1.46e-11 | 63.9 |
| Msa0512300 | AT3G19390.1 | 30.088 | 226 | 124 | 12 | 15 | 229 | 126 | 328 | 2.29e-11 | 63.5 |
| Msa0512300 | AT5G43060.1 | 28.959 | 221 | 122 | 11 | 20 | 229 | 140 | 336 | 9.72e-11 | 61.6 |
Find 89 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACTTTCACCTCAAGATATT+TGG | 0.091163 | 3_4:-62042245 | Msa0512300:CDS |
| AGCCTTCACCATGGCTATTT+TGG | 0.110748 | 3_4:+62040824 | None:intergenic |
| GCCTTACTTGTGATTGGTTT+CGG | 0.287089 | 3_4:-62040892 | Msa0512300:CDS |
| TGACCCTTCATCTTTCTAAA+TGG | 0.294917 | 3_4:+62041169 | None:intergenic |
| GTCAAGACCTTCAAATTTAG+AGG | 0.316229 | 3_4:+62043739 | None:intergenic |
| AGGGAAAGCTGGTGGAATAT+TGG | 0.316333 | 3_4:-62040852 | Msa0512300:CDS |
| ACTTTCACCTCAAGATATTT+GGG | 0.339917 | 3_4:-62042244 | Msa0512300:CDS |
| ATGGTTTCTCATCCAGTTAT+AGG | 0.348514 | 3_4:+62042167 | None:intergenic |
| GATCATGCCTTACTTGTGAT+TGG | 0.351517 | 3_4:-62040898 | Msa0512300:CDS |
| CACTTACTGATGCCTATAAC+TGG | 0.366175 | 3_4:-62042179 | Msa0512300:CDS |
| CCTGATGACTGGCTCCTAAC+GGG | 0.370747 | 3_4:+62043674 | None:intergenic |
| TCAAGATATTTGGGACAATC+TGG | 0.374553 | 3_4:-62042235 | Msa0512300:CDS |
| GACCACACCTCTAAATTTGA+AGG | 0.381254 | 3_4:-62043746 | Msa0512300:CDS |
| TAGATTCGATTTGCGGGATA+CGG | 0.386125 | 3_4:-62043708 | Msa0512300:CDS |
| GGTAATGAGCGACTAATATA+TGG | 0.401750 | 3_4:-62040757 | Msa0512300:CDS |
| AAAGATGAAGGGTCATCTAA+TGG | 0.426610 | 3_4:-62041161 | Msa0512300:CDS |
| CGGATCTGAGAGGACGGTTG+AGG | 0.442911 | 3_4:-62040872 | Msa0512300:CDS |
| GACGGGATGAGAAAGTTTAG+AGG | 0.444258 | 3_4:-62041103 | Msa0512300:CDS |
| GATGGATAGATTCGATTTGC+GGG | 0.444813 | 3_4:-62043714 | Msa0512300:CDS |
| CATGATATCCATGTTGAACT+TGG | 0.447673 | 3_4:+62040783 | None:intergenic |
| AAAATAGCCATGGTGAAGGC+TGG | 0.455443 | 3_4:-62040822 | Msa0512300:CDS |
| AGATTCGATTTGCGGGATAC+GGG | 0.469086 | 3_4:-62043707 | Msa0512300:CDS |
| GGTCCAAGGACTCCTCTATA+CGG | 0.475083 | 3_4:+62042120 | None:intergenic |
| GGTGAAGGCTGGGGAATGGA+TGG | 0.476327 | 3_4:-62040811 | Msa0512300:CDS |
| GGATCTGAGAGGACGGTTGA+GGG | 0.477043 | 3_4:-62040871 | Msa0512300:CDS |
| CCCGTTAGGAGCCAGTCATC+AGG | 0.478212 | 3_4:-62043674 | Msa0512300:CDS |
| AACAAAGGGGTGTGAATCCT+CGG | 0.481738 | 3_4:-62042272 | Msa0512300:CDS |
| TTATAGGATGGGATTTATAA+CGG | 0.485004 | 3_4:-62040970 | Msa0512300:intron |
| GTTCTTGTATCACAAACAAA+GGG | 0.489907 | 3_4:-62042286 | Msa0512300:CDS |
| TCCGAAACCAATCACAAGTA+AGG | 0.499592 | 3_4:+62040891 | None:intergenic |
| TCCTGATGACTGGCTCCTAA+CGG | 0.502752 | 3_4:+62043673 | None:intergenic |
| AAATAGCCATGGTGAAGGCT+GGG | 0.508217 | 3_4:-62040821 | Msa0512300:CDS |
| GGTACCATTTAGAAAGATGA+AGG | 0.509153 | 3_4:-62041173 | Msa0512300:CDS |
| GAGGAGTCATGGCCGTATAG+AGG | 0.510826 | 3_4:-62042132 | Msa0512300:CDS |
| GACCTTCAAATTTAGAGGTG+TGG | 0.511270 | 3_4:+62043744 | None:intergenic |
| ATTTGAAGGTCTTGACGTGA+TGG | 0.521921 | 3_4:-62043732 | Msa0512300:CDS |
| CCATGGTGAAGGCTGGGGAA+TGG | 0.523082 | 3_4:-62040815 | Msa0512300:CDS |
| TGGCCGTATAGAGGAGTCCT+TGG | 0.530116 | 3_4:-62042123 | Msa0512300:CDS |
| ATACTTACCTTCCTGATGAC+TGG | 0.532672 | 3_4:+62043663 | None:intergenic |
| TGATGGATAGATTCGATTTG+CGG | 0.532687 | 3_4:-62043715 | Msa0512300:CDS |
| TACCGGTGAAGTGGATTGAC+GGG | 0.533086 | 3_4:-62041120 | Msa0512300:CDS |
| GGTGTGTTCTCGAGGAGTCA+TGG | 0.542918 | 3_4:-62042143 | Msa0512300:CDS |
| ACAAATGCACTAGCTTGTGT+TGG | 0.543645 | 3_4:+62040946 | None:intergenic |
| CAGTAAGTGTCCTACCATCA+TGG | 0.545971 | 3_4:+62042193 | None:intergenic |
| TGAAGGACCTATCGCCGTAC+CGG | 0.553269 | 3_4:-62041137 | Msa0512300:CDS |
| CTTTCCTCCTTGTGCTGCTG+TGG | 0.553959 | 3_4:-62042310 | Msa0512300:CDS |
| GTCAATCCACTTCACCGGTA+CGG | 0.559616 | 3_4:+62041123 | None:intergenic |
| CACAGCAGCACAAGGAGGAA+AGG | 0.559784 | 3_4:+62042311 | None:intergenic |
| ACCACCACCTCAAAACCGTC+AGG | 0.559788 | 3_4:-62042100 | Msa0512300:intron |
| TAGTATCAACTAATCAGCAC+AGG | 0.560943 | 3_4:+62040724 | None:intergenic |
| CACTTCACCGGTACGGCGAT+AGG | 0.562452 | 3_4:+62041130 | None:intergenic |
| ATCCCGTCAATCCACTTCAC+CGG | 0.563017 | 3_4:+62041118 | None:intergenic |
| CTATCGCCGTACCGGTGAAG+TGG | 0.566204 | 3_4:-62041129 | Msa0512300:CDS |
| AATAGCCATGGTGAAGGCTG+GGG | 0.568716 | 3_4:-62040820 | Msa0512300:CDS |
| AAGGGTCATCTAATGGATGA+AGG | 0.570470 | 3_4:-62041154 | Msa0512300:CDS |
| CTGATGACTGGCTCCTAACG+GGG | 0.573191 | 3_4:+62043675 | None:intergenic |
| AAACCATGGGTGTGTTCTCG+AGG | 0.579121 | 3_4:-62042151 | Msa0512300:CDS |
| AATGAAGAGCAGAACCATGA+TGG | 0.580938 | 3_4:-62042207 | Msa0512300:CDS |
| AACACAGCAACCAATCATGT+GGG | 0.583455 | 3_4:-62040922 | Msa0512300:CDS |
| TGGTTTCGGATCTGAGAGGA+CGG | 0.584689 | 3_4:-62040878 | Msa0512300:CDS |
| GAGGACGGTTGAGGGAAAGC+TGG | 0.586987 | 3_4:-62040863 | Msa0512300:CDS |
| GACGGTTGAGGGAAAGCTGG+TGG | 0.598316 | 3_4:-62040860 | Msa0512300:CDS |
| AGTTCTTGTATCACAAACAA+AGG | 0.601284 | 3_4:-62042287 | Msa0512300:CDS |
| GTACCGGTGAAGTGGATTGA+CGG | 0.602026 | 3_4:-62041121 | Msa0512300:CDS |
| GTCCAAAATAGCCATGGTGA+AGG | 0.603456 | 3_4:-62040826 | Msa0512300:CDS |
| AAGAGCAGAACCATGATGGT+AGG | 0.617675 | 3_4:-62042203 | Msa0512300:CDS |
| TGGATTGTCCAAAATAGCCA+TGG | 0.626284 | 3_4:-62040832 | Msa0512300:CDS |
| TTAGCATTACAAGGTGTACG+TGG | 0.627813 | 3_4:-62041195 | Msa0512300:CDS |
| AAACACAGCAACCAATCATG+TGG | 0.628207 | 3_4:-62040923 | Msa0512300:CDS |
| TGGATATGCCAAGTTCAACA+TGG | 0.639324 | 3_4:-62040791 | Msa0512300:CDS |
| AGATTGTCCCAAATATCTTG+AGG | 0.640127 | 3_4:+62042237 | None:intergenic |
| AAGAACTCCACAGCAGCACA+AGG | 0.645764 | 3_4:+62042303 | None:intergenic |
| TTCAACATGGATATCATGTG+TGG | 0.647455 | 3_4:-62040778 | Msa0512300:CDS |
| ATAACTGGATGAGAAACCAT+GGG | 0.658279 | 3_4:-62042164 | Msa0512300:CDS |
| AGTATCAACTAATCAGCACA+GGG | 0.661895 | 3_4:+62040725 | None:intergenic |
| TGAGGTGAAAGTAGAATCCG+AGG | 0.665361 | 3_4:+62042255 | None:intergenic |
| CCATTCCCCAGCCTTCACCA+TGG | 0.666001 | 3_4:+62040815 | None:intergenic |
| TATAACTGGATGAGAAACCA+TGG | 0.667415 | 3_4:-62042165 | Msa0512300:CDS |
| ACACAGCAACCAATCATGTG+GGG | 0.668366 | 3_4:-62040921 | Msa0512300:CDS |
| CACAGCAACCAATCATGTGG+GGG | 0.671987 | 3_4:-62040920 | Msa0512300:CDS |
| TGATTGGTTTCGGATCTGAG+AGG | 0.677886 | 3_4:-62040882 | Msa0512300:CDS |
| AATGAGCGACTAATATATGG+AGG | 0.677975 | 3_4:-62040754 | Msa0512300:CDS |
| TAGCATTACAAGGTGTACGT+GGG | 0.683474 | 3_4:-62041194 | Msa0512300:CDS |
| GTACCATTTAGAAAGATGAA+GGG | 0.685091 | 3_4:-62041172 | Msa0512300:CDS |
| ACTCCTCGAGAACACACCCA+TGG | 0.685353 | 3_4:+62042148 | None:intergenic |
| AACTCCACAGCAGCACAAGG+AGG | 0.712937 | 3_4:+62042306 | None:intergenic |
| TTAGGAGCCAGTCATCAGGA+AGG | 0.713074 | 3_4:-62043670 | Msa0512300:intron |
| TTCTTGTATCACAAACAAAG+GGG | 0.726196 | 3_4:-62042285 | Msa0512300:CDS |
| GTATCAACTAATCAGCACAG+GGG | 0.831637 | 3_4:+62040726 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTAATTAAATTTAA+CGG | - | chr3_4:62041987-62042006 | Msa0512300:intron | 0.0% |
| !!! | GCTAAATTTTTATTTTTATT+AGG | - | chr3_4:62040868-62040887 | Msa0512300:CDS | 10.0% |
| !! | ATAATTCAAAATTTAGTTAA+GGG | + | chr3_4:62042053-62042072 | None:intergenic | 10.0% |
| !! | AATAATTCAAAATTTAGTTA+AGG | + | chr3_4:62042052-62042071 | None:intergenic | 10.0% |
| !!! | GCTAAATTTTTATTTTTATT+AGG | - | chr3_4:62040868-62040887 | Msa0512300:CDS | 10.0% |
| !! | ATAATTCAAAATTTAGTTAA+GGG | + | chr3_4:62042053-62042072 | None:intergenic | 10.0% |
| !! | AATAATTCAAAATTTAGTTA+AGG | + | chr3_4:62042052-62042071 | None:intergenic | 10.0% |
| !!! | CGTTTTTTAATTAAATTTAA+CGG | + | chr3_4:62041168-62041187 | None:intergenic | 10.0% |
| !! | AAATTTAATTAAAAAACGTT+AGG | - | chr3_4:62041170-62041189 | Msa0512300:CDS | 10.0% |
| !! | AATTTAATTAAAAAACGTTA+GGG | - | chr3_4:62041171-62041190 | Msa0512300:CDS | 10.0% |
| !!! | AACTAAATTTTGAATTATTT+TGG | + | chr3_4:62040945-62040964 | None:intergenic | 10.0% |
| !! | AATAATTCAAAATTTAGTTA+AGG | - | chr3_4:62042052-62042071 | Msa0512300:intron | 10.0% |
| !! | TTTGAACTATAATAATAAAA+AGG | + | chr3_4:62042128-62042147 | None:intergenic | 10.0% |
| !!! | AAATTATAGTGATTATTTTT+AGG | - | chr3_4:62042818-62042837 | Msa0512300:intron | 10.0% |
| !! | AATCACTATAATAATAATTA+AGG | + | chr3_4:62042934-62042953 | None:intergenic | 10.0% |
| !!! | AATTGAATAAATTTTTTCTA+AGG | - | chr3_4:62043012-62043031 | Msa0512300:intron | 10.0% |
| !!! | TTTTTTATTTAACTTATTGT+AGG | - | chr3_4:62043272-62043291 | Msa0512300:intron | 10.0% |
| !!! | ATTAACTATTTAATTGGTTT+CGG | - | chr3_4:62040911-62040930 | Msa0512300:CDS | 15.0% |
| !!! | ATTAACTATTTAATTGGTTT+CGG | - | chr3_4:62040911-62040930 | Msa0512300:CDS | 15.0% |
| !!! | ATGATTATGATTTTTGTTTA+TGG | - | chr3_4:62041782-62041801 | Msa0512300:intron | 15.0% |
| !!! | ATGGTTTTTGTTATAAAATT+TGG | - | chr3_4:62041865-62041884 | Msa0512300:intron | 15.0% |
| !! | TTTAATTAAATTTAACGGAA+AGG | - | chr3_4:62041992-62042011 | Msa0512300:intron | 15.0% |
| !! | GTAAAAAAATTACTATATGA+TGG | - | chr3_4:62042550-62042569 | Msa0512300:intron | 15.0% |
| !! | ATTTATTAGACATTCAATTA+TGG | - | chr3_4:62042685-62042704 | Msa0512300:intron | 15.0% |
| !! | CAACAAATATTTAAAAAAGT+TGG | + | chr3_4:62042741-62042760 | None:intergenic | 15.0% |
| !!! | TTTGATTTACATTTCATATA+AGG | - | chr3_4:62042793-62042812 | Msa0512300:intron | 15.0% |
| !! | ATCTATAGATTTCATATATT+TGG | - | chr3_4:62043081-62043100 | Msa0512300:intron | 15.0% |
| !!! | TATTTTTGCCTATTTTTTAT+TGG | - | chr3_4:62043234-62043253 | Msa0512300:intron | 15.0% |
| !!! | TTTTTCGTTTTTACAATTAT+AGG | - | chr3_4:62043510-62043529 | Msa0512300:intron | 15.0% |
| !!! | ATTAGGCTAAATTACATTTT+TGG | - | chr3_4:62040885-62040904 | Msa0512300:CDS | 20.0% |
| !! | GAAACCAATTAAATAGTTAA+TGG | + | chr3_4:62042084-62042103 | None:intergenic | 20.0% |
| !! | GCAATGTTAGATAAATTTAA+CGG | + | chr3_4:62041009-62041028 | None:intergenic | 20.0% |
| !! | GAAACCAATTAAATAGTTAA+TGG | + | chr3_4:62042084-62042103 | None:intergenic | 20.0% |
| !!! | GATTTTTTGAAATGATTTGA+TGG | + | chr3_4:62041422-62041441 | None:intergenic | 20.0% |
| !!! | ATGATTTTTGTTTATGGTTT+TGG | - | chr3_4:62041788-62041807 | Msa0512300:intron | 20.0% |
| !! | AATTTGTATGGAAAAGATAT+TGG | - | chr3_4:62041811-62041830 | Msa0512300:intron | 20.0% |
| !! | ATTTGTATGGAAAAGATATT+GGG | - | chr3_4:62041812-62041831 | Msa0512300:intron | 20.0% |
| !!! | GAAATGATTTTTCTTGTTTA+TGG | - | chr3_4:62041846-62041865 | Msa0512300:intron | 20.0% |
| !!! | TATTTTTGTTTATGAAGTTC+TGG | - | chr3_4:62041891-62041910 | Msa0512300:intron | 20.0% |
| !!! | ATTTTTGTTTATGAAGTTCT+GGG | - | chr3_4:62041892-62041911 | Msa0512300:intron | 20.0% |
| !!! | TATGAATTTTATGAGTTTCT+GGG | - | chr3_4:62041921-62041940 | Msa0512300:intron | 20.0% |
| !!! | CTTAACTATTTAATTGGTTT+CGG | + | chr3_4:62042085-62042104 | None:intergenic | 20.0% |
| !! | GAAACCAATTAAATAGTTAA+GGG | - | chr3_4:62042084-62042103 | Msa0512300:intron | 20.0% |
| !!! | AAAAGGCTAAATTACTTTTT+TGG | + | chr3_4:62042111-62042130 | None:intergenic | 20.0% |
| !!! | TGAAGAATAGATTCTTTTTT+GGG | + | chr3_4:62042435-62042454 | None:intergenic | 20.0% |
| !!! | TTGAAGAATAGATTCTTTTT+TGG | + | chr3_4:62042436-62042455 | None:intergenic | 20.0% |
| !! | GTAGCTCAATATTTATTATT+TGG | + | chr3_4:62042488-62042507 | None:intergenic | 20.0% |
| !!! | TAGTGATTATTTTTAGGTAT+TGG | - | chr3_4:62042824-62042843 | Msa0512300:intron | 20.0% |
| !!! | ATTTTTAAGTTAAGTTCGTA+AGG | - | chr3_4:62042891-62042910 | Msa0512300:intron | 20.0% |
| !! | AAAAAGAAAATATTGAAGGA+TGG | + | chr3_4:62043190-62043209 | None:intergenic | 20.0% |
| !!! | TCCTTCAATATTTTCTTTTT+TGG | - | chr3_4:62043190-62043209 | Msa0512300:intron | 20.0% |
| !!! | CCTTCAATATTTTCTTTTTT+GGG | - | chr3_4:62043191-62043210 | Msa0512300:intron | 20.0% |
| !! | AAACTCAACCAATAAAAAAT+AGG | + | chr3_4:62043245-62043264 | None:intergenic | 20.0% |
| ! | TGGTCCATTAACTATTTAAT+TGG | - | chr3_4:62040905-62040924 | Msa0512300:CDS | 25.0% |
| !! | TTTCTATCTGCTACATATTT+TGG | - | chr3_4:62040977-62040996 | Msa0512300:intron | 25.0% |
| !! | ATTAGGCTAAATTACCTTTT+TGG | - | chr3_4:62041044-62041063 | Msa0512300:intron | 25.0% |
| !! | AAATAGTTAATGGACCAAAA+AGG | + | chr3_4:62040902-62040921 | None:intergenic | 25.0% |
| ! | TGGTCCATTAACTATTTAAT+TGG | - | chr3_4:62040905-62040924 | Msa0512300:CDS | 25.0% |
| ! | TAATGAAGATGATGAAGATA+AGG | + | chr3_4:62041272-62041291 | None:intergenic | 25.0% |
| !! | TTGTTGTTGAAATTGAGATT+GGG | + | chr3_4:62041394-62041413 | None:intergenic | 25.0% |
| !! | ATTTGAGAAAGAAATTTTGC+TGG | + | chr3_4:62041472-62041491 | None:intergenic | 25.0% |
| !!! | TTATGGTTTTGGAATTTGTA+TGG | - | chr3_4:62041799-62041818 | Msa0512300:intron | 25.0% |
| !! | GTATGAATTTTATGAGTTTC+TGG | - | chr3_4:62041920-62041939 | Msa0512300:intron | 25.0% |
| ! | CGAAACCAATTAAATAGTTA+AGG | - | chr3_4:62042083-62042102 | Msa0512300:intron | 25.0% |
| ! | AGAATCTATTCTTCAATTTG+TGG | - | chr3_4:62042440-62042459 | Msa0512300:intron | 25.0% |
| !!! | TTTAGGTATTGGTTAACTTT+TGG | - | chr3_4:62042835-62042854 | Msa0512300:intron | 25.0% |
| ! | CCCAAAAAAGAAAATATTGA+AGG | + | chr3_4:62043194-62043213 | None:intergenic | 25.0% |
| !!! | TCGTTTTTACAATTATAGGA+TGG | - | chr3_4:62043514-62043533 | Msa0512300:intron | 25.0% |
| !! | CGTTTTTACAATTATAGGAT+GGG | - | chr3_4:62043515-62043534 | Msa0512300:intron | 25.0% |
| ! | TTATAGGATGGGATTTATAA+CGG | - | chr3_4:62043526-62043545 | Msa0512300:intron | 25.0% |
| ! | CTATTTAATTGGTTTCGGTT+TGG | - | chr3_4:62040916-62040935 | Msa0512300:CDS | 30.0% |
| ! | CTATTTAATTGGTTTCGGTT+TGG | - | chr3_4:62040916-62040935 | Msa0512300:CDS | 30.0% |
| GAAAAGACCAAAATGTGTTA+CGG | + | chr3_4:62041146-62041165 | None:intergenic | 30.0% | |
| AAATTGAGATTGGGTATTTG+TGG | + | chr3_4:62041385-62041404 | None:intergenic | 30.0% | |
| ! | GTTGTTGTTGAAATTGAGAT+TGG | + | chr3_4:62041395-62041414 | None:intergenic | 30.0% |
| ! | AGAAATTTTGCTGGAATTGT+TGG | + | chr3_4:62041463-62041482 | None:intergenic | 30.0% |
| GGAAAATGGAAAAACGATTA+GGG | + | chr3_4:62041531-62041550 | None:intergenic | 30.0% | |
| ACACAACAAACACATCAATT+GGG | + | chr3_4:62041586-62041605 | None:intergenic | 30.0% | |
| AACACAACAAACACATCAAT+TGG | + | chr3_4:62041587-62041606 | None:intergenic | 30.0% | |
| !!! | TGCTTTGCTGTTTTTCTATT+TGG | - | chr3_4:62041702-62041721 | Msa0512300:intron | 30.0% |
| ! | CTATTTGGTCTTTGTACTTA+TGG | - | chr3_4:62041717-62041736 | Msa0512300:intron | 30.0% |
| ! | CTATTTAATTGGTTTCGGTT+TGG | + | chr3_4:62040916-62040935 | None:intergenic | 30.0% |
| TGGTCCCTTAACTATTTAAT+TGG | + | chr3_4:62042091-62042110 | None:intergenic | 30.0% | |
| AGTTCTTGTATCACAAACAA+AGG | - | chr3_4:62042209-62042228 | Msa0512300:CDS | 30.0% | |
| GTTCTTGTATCACAAACAAA+GGG | - | chr3_4:62042210-62042229 | Msa0512300:CDS | 30.0% | |
| TTCTTGTATCACAAACAAAG+GGG | - | chr3_4:62042211-62042230 | Msa0512300:CDS | 30.0% | |
| TACTTTCACCTCAAGATATT+TGG | - | chr3_4:62042251-62042270 | Msa0512300:CDS | 30.0% | |
| ACTTTCACCTCAAGATATTT+GGG | - | chr3_4:62042252-62042271 | Msa0512300:CDS | 30.0% | |
| AGTCTCAATAACGAGTTAAA+CGG | - | chr3_4:62042604-62042623 | Msa0512300:intron | 30.0% | |
| AATATTGAAGGATGGAAAAG+AGG | + | chr3_4:62043182-62043201 | None:intergenic | 30.0% | |
| !! | AGGTTCATTTTAGCATTACA+AGG | - | chr3_4:62043292-62043311 | Msa0512300:intron | 30.0% |
| GTACCATTTAGAAAGATGAA+GGG | - | chr3_4:62043324-62043343 | Msa0512300:intron | 30.0% | |
| GTCAAGACCTTCAAATTTAG+AGG | + | chr3_4:62040760-62040779 | None:intergenic | 35.0% | |
| ! | TGATGGATAGATTCGATTTG+CGG | - | chr3_4:62040781-62040800 | Msa0512300:CDS | 35.0% |
| TGTAGCAGATAGAAAGTCAA+GGG | + | chr3_4:62040972-62040991 | None:intergenic | 35.0% | |
| ATGTAGCAGATAGAAAGTCA+AGG | + | chr3_4:62040973-62040992 | None:intergenic | 35.0% | |
| TGTTACGGAGAGAAAGTTAA+GGG | + | chr3_4:62041131-62041150 | None:intergenic | 35.0% | |
| ! | TTTCTCTCCGTAACACATTT+TGG | - | chr3_4:62041136-62041155 | Msa0512300:CDS | 35.0% |
| ATGTCATAATGACACGTGTA+CGG | + | chr3_4:62041220-62041239 | None:intergenic | 35.0% | |
| ! | TACACGTGTCATTATGACAT+TGG | - | chr3_4:62041220-62041239 | Msa0512300:intron | 35.0% |
| GGGAAAATGGAAAAACGATT+AGG | + | chr3_4:62041532-62041551 | None:intergenic | 35.0% | |
| TCGATTAGGGTTGTTCAATT+GGG | + | chr3_4:62041553-62041572 | None:intergenic | 35.0% | |
| ATCGATTAGGGTTGTTCAAT+TGG | + | chr3_4:62041554-62041573 | None:intergenic | 35.0% | |
| CACAACAAACACATCAATTG+GGG | + | chr3_4:62041585-62041604 | None:intergenic | 35.0% | |
| GAAAAACAGCAAAGCAAATG+AGG | + | chr3_4:62041698-62041717 | None:intergenic | 35.0% | |
| GTCTTTGTACTTATGGTTCT+AGG | - | chr3_4:62041724-62041743 | Msa0512300:intron | 35.0% | |
| ! | TTCCTCTCTGTTACACATTT+TGG | + | chr3_4:62042019-62042038 | None:intergenic | 35.0% |
| TGTAACAGAGAGGAAGTTAA+GGG | - | chr3_4:62042024-62042043 | Msa0512300:intron | 35.0% | |
| AGATTGTCCCAAATATCTTG+AGG | + | chr3_4:62042262-62042281 | None:intergenic | 35.0% | |
| ! | TCAAGATATTTGGGACAATC+TGG | - | chr3_4:62042261-62042280 | Msa0512300:CDS | 35.0% |
| ATGGTTTCTCATCCAGTTAT+AGG | + | chr3_4:62042332-62042351 | None:intergenic | 35.0% | |
| TATAACTGGATGAGAAACCA+TGG | - | chr3_4:62042331-62042350 | Msa0512300:intron | 35.0% | |
| ATAACTGGATGAGAAACCAT+GGG | - | chr3_4:62042332-62042351 | Msa0512300:intron | 35.0% | |
| !! | AATTTTCGCTAGCTTCGTAA+AGG | - | chr3_4:62043145-62043164 | Msa0512300:intron | 35.0% |
| GGTACCATTTAGAAAGATGA+AGG | - | chr3_4:62043323-62043342 | Msa0512300:intron | 35.0% | |
| TGACCCTTCATCTTTCTAAA+TGG | + | chr3_4:62043330-62043349 | None:intergenic | 35.0% | |
| AAAGATGAAGGGTCATCTAA+TGG | - | chr3_4:62043335-62043354 | Msa0512300:intron | 35.0% | |
| CATGATATCCATGTTGAACT+TGG | + | chr3_4:62043716-62043735 | None:intergenic | 35.0% | |
| TTCAACATGGATATCATGTG+TGG | - | chr3_4:62043718-62043737 | Msa0512300:CDS | 35.0% | |
| GGTAATGAGCGACTAATATA+TGG | - | chr3_4:62043739-62043758 | Msa0512300:CDS | 35.0% | |
| AATGAGCGACTAATATATGG+AGG | - | chr3_4:62043742-62043761 | Msa0512300:CDS | 35.0% | |
| GACCACACCTCTAAATTTGA+AGG | - | chr3_4:62040750-62040769 | Msa0512300:CDS | 40.0% | |
| GACCTTCAAATTTAGAGGTG+TGG | + | chr3_4:62040755-62040774 | None:intergenic | 40.0% | |
| ATTTGAAGGTCTTGACGTGA+TGG | - | chr3_4:62040764-62040783 | Msa0512300:CDS | 40.0% | |
| ! | GATGGATAGATTCGATTTGC+GGG | - | chr3_4:62040782-62040801 | Msa0512300:CDS | 40.0% |
| ! | TAGATTCGATTTGCGGGATA+CGG | - | chr3_4:62040788-62040807 | Msa0512300:CDS | 40.0% |
| ATACTTACCTTCCTGATGAC+TGG | + | chr3_4:62040836-62040855 | None:intergenic | 40.0% | |
| GTGTTACGGAGAGAAAGTTA+AGG | + | chr3_4:62041132-62041151 | None:intergenic | 40.0% | |
| !! | TGTCATTATGACATTGGCTC+TGG | - | chr3_4:62041226-62041245 | Msa0512300:intron | 40.0% |
| GTTGTGAGAAGATGAAGATC+TGG | + | chr3_4:62041323-62041342 | None:intergenic | 40.0% | |
| ! | GAATTCGTTTTCCCCAATTC+TGG | - | chr3_4:62041503-62041522 | Msa0512300:intron | 40.0% |
| ACGATTAGGGTTCCAGAATT+GGG | + | chr3_4:62041518-62041537 | None:intergenic | 40.0% | |
| AACGATTAGGGTTCCAGAAT+TGG | + | chr3_4:62041519-62041538 | None:intergenic | 40.0% | |
| GGTTGTTCAATTGGGGAAAA+TGG | + | chr3_4:62041545-62041564 | None:intergenic | 40.0% | |
| CGATTAGGGTTGTTCAATTG+GGG | + | chr3_4:62041552-62041571 | None:intergenic | 40.0% | |
| GGGGAAAACGAAATCGATTA+GGG | + | chr3_4:62041566-62041585 | None:intergenic | 40.0% | |
| TGGGGAAAACGAAATCGATT+AGG | + | chr3_4:62041567-62041586 | None:intergenic | 40.0% | |
| ! | TTGAGAGTGTGATTTGTGTG+TGG | - | chr3_4:62041614-62041633 | Msa0512300:intron | 40.0% |
| !!! | TTTTCCTGTGTTTGCTGTCA+TGG | - | chr3_4:62041653-62041672 | Msa0512300:intron | 40.0% |
| GACCAAAATGTGTAACAGAG+AGG | - | chr3_4:62042014-62042033 | Msa0512300:intron | 40.0% | |
| GTGTAACAGAGAGGAAGTTA+AGG | - | chr3_4:62042023-62042042 | Msa0512300:intron | 40.0% | |
| AATGAAGAGCAGAACCATGA+TGG | - | chr3_4:62042289-62042308 | Msa0512300:CDS | 40.0% | |
| CACTTACTGATGCCTATAAC+TGG | - | chr3_4:62042317-62042336 | Msa0512300:CDS | 40.0% | |
| ! | TATGTTACCTGACGGTTTTG+AGG | + | chr3_4:62042406-62042425 | None:intergenic | 40.0% |
| GGTCTTGATATGTTACCTGA+CGG | + | chr3_4:62042414-62042433 | None:intergenic | 40.0% | |
| !! | TTTTCTTTACACCTGACTCG+TGG | - | chr3_4:62043118-62043137 | Msa0512300:intron | 40.0% |
| GAAAATTCTATCCACGAGTC+AGG | + | chr3_4:62043132-62043151 | None:intergenic | 40.0% | |
| GGATGGAAAAGAGGAAAAGA+TGG | + | chr3_4:62043173-62043192 | None:intergenic | 40.0% | |
| TTAGCATTACAAGGTGTACG+TGG | - | chr3_4:62043301-62043320 | Msa0512300:intron | 40.0% | |
| TAGCATTACAAGGTGTACGT+GGG | - | chr3_4:62043302-62043321 | Msa0512300:intron | 40.0% | |
| ! | AAGGGTCATCTAATGGATGA+AGG | - | chr3_4:62043342-62043361 | Msa0512300:intron | 40.0% |
| ! | ACAAATGCACTAGCTTGTGT+TGG | + | chr3_4:62043553-62043572 | None:intergenic | 40.0% |
| AAACACAGCAACCAATCATG+TGG | - | chr3_4:62043573-62043592 | Msa0512300:intron | 40.0% | |
| AACACAGCAACCAATCATGT+GGG | - | chr3_4:62043574-62043593 | Msa0512300:intron | 40.0% | |
| GATCATGCCTTACTTGTGAT+TGG | - | chr3_4:62043598-62043617 | Msa0512300:intron | 40.0% | |
| !! | GCCTTACTTGTGATTGGTTT+CGG | - | chr3_4:62043604-62043623 | Msa0512300:intron | 40.0% |
| TCCGAAACCAATCACAAGTA+AGG | + | chr3_4:62043608-62043627 | None:intergenic | 40.0% | |
| TGGATTGTCCAAAATAGCCA+TGG | - | chr3_4:62043664-62043683 | Msa0512300:intron | 40.0% | |
| TGGATATGCCAAGTTCAACA+TGG | - | chr3_4:62043705-62043724 | Msa0512300:CDS | 40.0% | |
| ! | AGATTCGATTTGCGGGATAC+GGG | - | chr3_4:62040789-62040808 | Msa0512300:CDS | 45.0% |
| !!! | CGGGTTTTTTAAACCCCGTT+AGG | - | chr3_4:62040808-62040827 | Msa0512300:CDS | 45.0% |
| CGATTAGGGTTCCAGAATTG+GGG | + | chr3_4:62041517-62041536 | None:intergenic | 45.0% | |
| ACATCCATGACAGCAAACAC+AGG | + | chr3_4:62041660-62041679 | None:intergenic | 45.0% | |
| !! | TGTGTTTGCTGTCATGGATG+TGG | - | chr3_4:62041659-62041678 | Msa0512300:intron | 45.0% |
| ! | AACAAAGGGGTGTGAATCCT+CGG | - | chr3_4:62042224-62042243 | Msa0512300:CDS | 45.0% |
| TGAGGTGAAAGTAGAATCCG+AGG | + | chr3_4:62042244-62042263 | None:intergenic | 45.0% | |
| AAGAGCAGAACCATGATGGT+AGG | - | chr3_4:62042293-62042312 | Msa0512300:CDS | 45.0% | |
| CAGTAAGTGTCCTACCATCA+TGG | + | chr3_4:62042306-62042325 | None:intergenic | 45.0% | |
| GACGGGATGAGAAAGTTTAG+AGG | - | chr3_4:62043393-62043412 | Msa0512300:intron | 45.0% | |
| ACACAGCAACCAATCATGTG+GGG | - | chr3_4:62043575-62043594 | Msa0512300:intron | 45.0% | |
| !! | TGATTGGTTTCGGATCTGAG+AGG | - | chr3_4:62043614-62043633 | Msa0512300:intron | 45.0% |
| AGGGAAAGCTGGTGGAATAT+TGG | - | chr3_4:62043644-62043663 | Msa0512300:intron | 45.0% | |
| GTCCAAAATAGCCATGGTGA+AGG | - | chr3_4:62043670-62043689 | Msa0512300:intron | 45.0% | |
| ! | AGCCTTCACCATGGCTATTT+TGG | + | chr3_4:62043675-62043694 | None:intergenic | 45.0% |
| AAAATAGCCATGGTGAAGGC+TGG | - | chr3_4:62043674-62043693 | Msa0512300:CDS | 45.0% | |
| AAATAGCCATGGTGAAGGCT+GGG | - | chr3_4:62043675-62043694 | Msa0512300:CDS | 45.0% | |
| !! | ATTTAATTAAAAAAATGTTA+GGG | + | chr3_4:62041983-62042002 | None:intergenic | 5.0% |
| !! | AATTTAATTAAAAAAATGTT+AGG | + | chr3_4:62041984-62042003 | None:intergenic | 5.0% |
| !!! | TCATAAATTATAAATTTTTT+AGG | + | chr3_4:62043044-62043063 | None:intergenic | 5.0% |
| ! | TCCTGATGACTGGCTCCTAA+CGG | + | chr3_4:62040826-62040845 | None:intergenic | 50.0% |
| TTAGGAGCCAGTCATCAGGA+AGG | - | chr3_4:62040826-62040845 | Msa0512300:CDS | 50.0% | |
| AAGAACTCCACAGCAGCACA+AGG | + | chr3_4:62042196-62042215 | None:intergenic | 50.0% | |
| AAACCATGGGTGTGTTCTCG+AGG | - | chr3_4:62042345-62042364 | Msa0512300:intron | 50.0% | |
| GGTCCAAGGACTCCTCTATA+CGG | + | chr3_4:62042379-62042398 | None:intergenic | 50.0% | |
| !!! | GTTACCTGACGGTTTTGAGG+TGG | + | chr3_4:62042403-62042422 | None:intergenic | 50.0% |
| GTCAATCCACTTCACCGGTA+CGG | + | chr3_4:62043376-62043395 | None:intergenic | 50.0% | |
| !! | GTACCGGTGAAGTGGATTGA+CGG | - | chr3_4:62043375-62043394 | Msa0512300:intron | 50.0% |
| !! | TACCGGTGAAGTGGATTGAC+GGG | - | chr3_4:62043376-62043395 | Msa0512300:intron | 50.0% |
| ATCCCGTCAATCCACTTCAC+CGG | + | chr3_4:62043381-62043400 | None:intergenic | 50.0% | |
| CACAGCAACCAATCATGTGG+GGG | - | chr3_4:62043576-62043595 | Msa0512300:intron | 50.0% | |
| TGGTTTCGGATCTGAGAGGA+CGG | - | chr3_4:62043618-62043637 | Msa0512300:intron | 50.0% | |
| AATAGCCATGGTGAAGGCTG+GGG | - | chr3_4:62043676-62043695 | Msa0512300:CDS | 50.0% | |
| ! | CTGATGACTGGCTCCTAACG+GGG | + | chr3_4:62040824-62040843 | None:intergenic | 55.0% |
| ! | CCTGATGACTGGCTCCTAAC+GGG | + | chr3_4:62040825-62040844 | None:intergenic | 55.0% |
| CACAGCAGCACAAGGAGGAA+AGG | + | chr3_4:62042188-62042207 | None:intergenic | 55.0% | |
| ! | CTTTCCTCCTTGTGCTGCTG+TGG | - | chr3_4:62042186-62042205 | Msa0512300:CDS | 55.0% |
| AACTCCACAGCAGCACAAGG+AGG | + | chr3_4:62042193-62042212 | None:intergenic | 55.0% | |
| ACTCCTCGAGAACACACCCA+TGG | + | chr3_4:62042351-62042370 | None:intergenic | 55.0% | |
| GGTGTGTTCTCGAGGAGTCA+TGG | - | chr3_4:62042353-62042372 | Msa0512300:intron | 55.0% | |
| GAGGAGTCATGGCCGTATAG+AGG | - | chr3_4:62042364-62042383 | Msa0512300:intron | 55.0% | |
| TGGCCGTATAGAGGAGTCCT+TGG | - | chr3_4:62042373-62042392 | Msa0512300:intron | 55.0% | |
| !!! | GGTTTTGAGGTGGTGGTCCA+AGG | + | chr3_4:62042393-62042412 | None:intergenic | 55.0% |
| ACCACCACCTCAAAACCGTC+AGG | - | chr3_4:62042396-62042415 | Msa0512300:intron | 55.0% | |
| !!! | ACCTGACGGTTTTGAGGTGG+TGG | + | chr3_4:62042400-62042419 | None:intergenic | 55.0% |
| TGAAGGACCTATCGCCGTAC+CGG | - | chr3_4:62043359-62043378 | Msa0512300:intron | 55.0% | |
| GGCATGATCCCCCACATGAT+TGG | + | chr3_4:62043587-62043606 | None:intergenic | 55.0% | |
| GGATCTGAGAGGACGGTTGA+GGG | - | chr3_4:62043625-62043644 | Msa0512300:intron | 55.0% | |
| CCCGTTAGGAGCCAGTCATC+AGG | - | chr3_4:62040822-62040841 | Msa0512300:CDS | 60.0% | |
| CACTTCACCGGTACGGCGAT+AGG | + | chr3_4:62043369-62043388 | None:intergenic | 60.0% | |
| ! | CTATCGCCGTACCGGTGAAG+TGG | - | chr3_4:62043367-62043386 | Msa0512300:intron | 60.0% |
| CGGATCTGAGAGGACGGTTG+AGG | - | chr3_4:62043624-62043643 | Msa0512300:intron | 60.0% | |
| GAGGACGGTTGAGGGAAAGC+TGG | - | chr3_4:62043633-62043652 | Msa0512300:intron | 60.0% | |
| GACGGTTGAGGGAAAGCTGG+TGG | - | chr3_4:62043636-62043655 | Msa0512300:intron | 60.0% | |
| CCATTCCCCAGCCTTCACCA+TGG | + | chr3_4:62043684-62043703 | None:intergenic | 60.0% | |
| CCATGGTGAAGGCTGGGGAA+TGG | - | chr3_4:62043681-62043700 | Msa0512300:CDS | 60.0% | |
| GGTGAAGGCTGGGGAATGGA+TGG | - | chr3_4:62043685-62043704 | Msa0512300:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 62040729 | 62043789 | 62040729 | ID=Msa0512300;Name=Msa0512300 |
| chr3_4 | mRNA | 62040729 | 62043789 | 62040729 | ID=Msa0512300-mRNA-1;Parent=Msa0512300;Name=Msa0512300-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0|0|0.75|1|1|4|0|247 |
| chr3_4 | exon | 62043671 | 62043789 | 62043671 | ID=Msa0512300-mRNA-1:exon:15319;Parent=Msa0512300-mRNA-1 |
| chr3_4 | exon | 62042101 | 62042344 | 62042101 | ID=Msa0512300-mRNA-1:exon:15318;Parent=Msa0512300-mRNA-1 |
| chr3_4 | exon | 62041102 | 62041224 | 62041102 | ID=Msa0512300-mRNA-1:exon:15317;Parent=Msa0512300-mRNA-1 |
| chr3_4 | exon | 62040729 | 62040986 | 62040729 | ID=Msa0512300-mRNA-1:exon:15316;Parent=Msa0512300-mRNA-1 |
| chr3_4 | CDS | 62043671 | 62043789 | 62043671 | ID=Msa0512300-mRNA-1:cds;Parent=Msa0512300-mRNA-1 |
| chr3_4 | CDS | 62042101 | 62042344 | 62042101 | ID=Msa0512300-mRNA-1:cds;Parent=Msa0512300-mRNA-1 |
| chr3_4 | CDS | 62041102 | 62041224 | 62041102 | ID=Msa0512300-mRNA-1:cds;Parent=Msa0512300-mRNA-1 |
| chr3_4 | CDS | 62040729 | 62040986 | 62040729 | ID=Msa0512300-mRNA-1:cds;Parent=Msa0512300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
