Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0893190 | KAE9610406.1 | 80.263 | 228 | 45 | 0 | 1 | 228 | 1 | 228 | 1.89e-135 | 389 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0893190 | sp|Q9FQA3|GST23_MAIZE | 49.550 | 222 | 111 | 1 | 1 | 221 | 1 | 222 | 4.38e-74 | 226 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0893190 | Msa0893220 | 0.860491 | 1.990639e-63 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0893190 | MtrunA17_Chr8g0379581 | 85.526 | 228 | 29 | 1 | 1 | 228 | 1 | 224 | 1.47e-133 | 374 |
| Msa0893190 | MtrunA17_Chr8g0379561 | 65.625 | 224 | 77 | 0 | 1 | 224 | 2 | 225 | 8.25e-109 | 312 |
| Msa0893190 | MtrunA17_Chr6g0483141 | 53.623 | 207 | 96 | 0 | 5 | 211 | 3 | 209 | 7.88e-78 | 233 |
| Msa0893190 | MtrunA17_Chr7g0240681 | 45.495 | 222 | 118 | 2 | 2 | 221 | 4 | 224 | 9.97e-72 | 218 |
| Msa0893190 | MtrunA17_Chr4g0008781 | 49.528 | 212 | 107 | 0 | 2 | 213 | 5 | 216 | 5.98e-71 | 216 |
| Msa0893190 | MtrunA17_Chr3g0132581 | 48.165 | 218 | 113 | 0 | 1 | 218 | 1 | 218 | 7.87e-69 | 210 |
| Msa0893190 | MtrunA17_Chr7g0240561 | 45.662 | 219 | 117 | 2 | 1 | 218 | 3 | 220 | 1.27e-66 | 205 |
| Msa0893190 | MtrunA17_Chr7g0240581 | 47.489 | 219 | 113 | 2 | 2 | 219 | 4 | 221 | 1.42e-66 | 204 |
| Msa0893190 | MtrunA17_Chr7g0240641 | 43.694 | 222 | 123 | 2 | 1 | 221 | 3 | 223 | 3.91e-66 | 204 |
| Msa0893190 | MtrunA17_Chr1g0196771 | 47.248 | 218 | 112 | 2 | 4 | 219 | 2 | 218 | 5.84e-66 | 203 |
| Msa0893190 | MtrunA17_Chr7g0240631 | 42.793 | 222 | 125 | 2 | 1 | 221 | 3 | 223 | 1.52e-65 | 202 |
| Msa0893190 | MtrunA17_Chr4g0008791 | 44.495 | 218 | 119 | 2 | 5 | 221 | 7 | 223 | 2.18e-65 | 202 |
| Msa0893190 | MtrunA17_Chr7g0240691 | 42.273 | 220 | 124 | 2 | 4 | 221 | 36 | 254 | 9.81e-65 | 201 |
| Msa0893190 | MtrunA17_Chr1g0212301 | 46.977 | 215 | 111 | 2 | 5 | 216 | 3 | 217 | 8.64e-63 | 195 |
| Msa0893190 | MtrunA17_Chr7g0240551 | 43.891 | 221 | 122 | 2 | 2 | 221 | 4 | 223 | 1.82e-62 | 194 |
| Msa0893190 | MtrunA17_Chr7g0240541 | 43.891 | 221 | 122 | 2 | 2 | 221 | 4 | 223 | 2.83e-61 | 191 |
| Msa0893190 | MtrunA17_Chr7g0240611 | 44.037 | 218 | 116 | 3 | 2 | 218 | 4 | 216 | 1.67e-60 | 189 |
| Msa0893190 | MtrunA17_Chr7g0240531 | 42.986 | 221 | 124 | 2 | 2 | 221 | 4 | 223 | 6.27e-60 | 188 |
| Msa0893190 | MtrunA17_Chr7g0240521 | 46.977 | 215 | 112 | 2 | 2 | 215 | 11 | 224 | 7.03e-58 | 183 |
| Msa0893190 | MtrunA17_Chr7g0240511 | 44.495 | 218 | 114 | 3 | 2 | 218 | 4 | 215 | 2.21e-57 | 181 |
| Msa0893190 | MtrunA17_Chr7g0240671 | 44.928 | 207 | 108 | 3 | 6 | 211 | 5 | 206 | 3.25e-57 | 181 |
| Msa0893190 | MtrunA17_Chr7g0240651 | 43.318 | 217 | 115 | 4 | 4 | 218 | 6 | 216 | 8.64e-54 | 172 |
| Msa0893190 | MtrunA17_Chr5g0417011 | 41.475 | 217 | 121 | 2 | 3 | 213 | 5 | 221 | 9.74e-54 | 172 |
| Msa0893190 | MtrunA17_Chr1g0196661 | 42.381 | 210 | 119 | 1 | 5 | 212 | 3 | 212 | 2.28e-52 | 169 |
| Msa0893190 | MtrunA17_Chr2g0312771 | 41.395 | 215 | 123 | 2 | 3 | 216 | 2 | 214 | 4.04e-52 | 167 |
| Msa0893190 | MtrunA17_Chr2g0312751 | 41.395 | 215 | 123 | 2 | 3 | 216 | 2 | 214 | 1.22e-51 | 166 |
| Msa0893190 | MtrunA17_Chr4g0029341 | 41.860 | 215 | 119 | 3 | 3 | 213 | 2 | 214 | 1.07e-50 | 164 |
| Msa0893190 | MtrunA17_Chr2g0312721 | 38.785 | 214 | 128 | 2 | 3 | 215 | 2 | 213 | 2.64e-49 | 160 |
| Msa0893190 | MtrunA17_Chr1g0196711 | 41.706 | 211 | 120 | 2 | 5 | 213 | 3 | 212 | 3.98e-49 | 160 |
| Msa0893190 | MtrunA17_Chr7g0240661 | 43.541 | 209 | 112 | 3 | 4 | 211 | 6 | 209 | 1.31e-48 | 159 |
| Msa0893190 | MtrunA17_Chr5g0415411 | 38.991 | 218 | 125 | 3 | 1 | 210 | 1 | 218 | 1.40e-48 | 159 |
| Msa0893190 | MtrunA17_Chr8g0363751 | 41.204 | 216 | 119 | 5 | 1 | 208 | 1 | 216 | 2.14e-48 | 159 |
| Msa0893190 | MtrunA17_Chr1g0196721 | 42.029 | 207 | 118 | 1 | 6 | 210 | 3 | 209 | 3.16e-48 | 158 |
| Msa0893190 | MtrunA17_Chr2g0312781 | 40.887 | 203 | 117 | 2 | 6 | 207 | 22 | 222 | 3.86e-48 | 158 |
| Msa0893190 | MtrunA17_Chr2g0312731 | 38.350 | 206 | 124 | 2 | 3 | 207 | 2 | 205 | 1.27e-46 | 154 |
| Msa0893190 | MtrunA17_Chr3g0107731 | 41.206 | 199 | 114 | 2 | 5 | 202 | 9 | 205 | 1.38e-46 | 154 |
| Msa0893190 | MtrunA17_Chr2g0312811 | 37.443 | 219 | 132 | 3 | 3 | 218 | 2 | 218 | 6.53e-46 | 152 |
| Msa0893190 | MtrunA17_Chr1g0196691 | 38.278 | 209 | 126 | 2 | 5 | 210 | 28 | 236 | 1.99e-45 | 151 |
| Msa0893190 | MtrunA17_Chr2g0312791 | 39.901 | 203 | 118 | 3 | 3 | 203 | 2 | 202 | 4.47e-45 | 150 |
| Msa0893190 | MtrunA17_Chr2g0312681 | 38.073 | 218 | 130 | 4 | 3 | 218 | 2 | 216 | 3.35e-43 | 145 |
| Msa0893190 | MtrunA17_Chr4g0069471 | 47.159 | 176 | 91 | 2 | 5 | 178 | 25 | 200 | 5.74e-43 | 144 |
| Msa0893190 | MtrunA17_Chr3g0107741 | 39.409 | 203 | 120 | 2 | 1 | 202 | 5 | 205 | 1.76e-42 | 143 |
| Msa0893190 | MtrunA17_Chr8g0357241 | 35.349 | 215 | 136 | 2 | 3 | 216 | 2 | 214 | 4.83e-41 | 139 |
| Msa0893190 | MtrunA17_Chr5g0433801 | 38.426 | 216 | 128 | 3 | 3 | 216 | 4 | 216 | 5.93e-41 | 139 |
| Msa0893190 | MtrunA17_Chr8g0357211 | 40.805 | 174 | 102 | 1 | 3 | 175 | 2 | 175 | 4.03e-40 | 137 |
| Msa0893190 | MtrunA17_Chr2g0312711 | 38.249 | 217 | 130 | 3 | 3 | 218 | 2 | 215 | 1.68e-39 | 135 |
| Msa0893190 | MtrunA17_Chr8g0391631 | 46.541 | 159 | 77 | 5 | 1 | 151 | 17 | 175 | 5.19e-39 | 132 |
| Msa0893190 | MtrunA17_Chr2g0312691 | 36.697 | 218 | 133 | 4 | 3 | 218 | 2 | 216 | 7.60e-39 | 134 |
| Msa0893190 | MtrunA17_Chr2g0313561 | 46.032 | 63 | 33 | 1 | 48 | 109 | 1 | 63 | 3.10e-16 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0893190 | AT2G29420.1 | 42.857 | 217 | 124 | 0 | 2 | 218 | 6 | 222 | 3.86e-65 | 201 |
| Msa0893190 | AT3G09270.1 | 42.727 | 220 | 120 | 3 | 4 | 221 | 5 | 220 | 2.32e-60 | 189 |
| Msa0893190 | AT2G29490.1 | 45.146 | 206 | 112 | 1 | 4 | 208 | 6 | 211 | 3.34e-57 | 181 |
| Msa0893190 | AT2G29460.1 | 43.961 | 207 | 115 | 1 | 3 | 208 | 5 | 211 | 1.78e-56 | 179 |
| Msa0893190 | AT2G29480.1 | 43.137 | 204 | 115 | 1 | 4 | 206 | 6 | 209 | 8.94e-56 | 177 |
| Msa0893190 | AT2G29450.1 | 43.062 | 209 | 111 | 3 | 3 | 206 | 4 | 209 | 4.92e-55 | 176 |
| Msa0893190 | AT2G29440.1 | 40.359 | 223 | 131 | 2 | 1 | 221 | 1 | 223 | 2.62e-53 | 171 |
| Msa0893190 | AT1G10370.1 | 43.925 | 214 | 113 | 2 | 1 | 207 | 1 | 214 | 3.51e-53 | 171 |
| Msa0893190 | AT1G17170.1 | 42.396 | 217 | 121 | 3 | 3 | 218 | 2 | 215 | 6.72e-52 | 167 |
| Msa0893190 | AT1G59670.1 | 42.593 | 216 | 115 | 5 | 1 | 207 | 1 | 216 | 3.06e-51 | 166 |
| Msa0893190 | AT2G29470.1 | 42.927 | 205 | 115 | 2 | 4 | 206 | 6 | 210 | 5.63e-51 | 165 |
| Msa0893190 | AT1G78370.1 | 40.000 | 210 | 123 | 2 | 8 | 216 | 7 | 214 | 4.83e-50 | 162 |
| Msa0893190 | AT1G78380.1 | 40.465 | 215 | 125 | 2 | 3 | 216 | 2 | 214 | 6.36e-50 | 162 |
| Msa0893190 | AT1G59700.1 | 41.176 | 221 | 121 | 5 | 1 | 212 | 1 | 221 | 4.68e-49 | 160 |
| Msa0893190 | AT1G78340.1 | 39.535 | 215 | 127 | 3 | 3 | 216 | 2 | 214 | 3.09e-47 | 155 |
| Msa0893190 | AT1G17180.1 | 38.249 | 217 | 131 | 2 | 3 | 218 | 2 | 216 | 6.88e-47 | 155 |
| Msa0893190 | AT1G78320.1 | 38.710 | 217 | 130 | 2 | 4 | 219 | 3 | 217 | 1.04e-46 | 154 |
| Msa0893190 | AT1G10360.1 | 38.182 | 220 | 117 | 3 | 1 | 207 | 1 | 214 | 3.71e-46 | 153 |
| Msa0893190 | AT1G17190.1 | 38.249 | 217 | 131 | 2 | 1 | 216 | 1 | 215 | 4.68e-46 | 152 |
| Msa0893190 | AT1G53680.1 | 40.094 | 212 | 120 | 4 | 1 | 207 | 1 | 210 | 1.10e-44 | 149 |
| Msa0893190 | AT5G62480.1 | 37.850 | 214 | 124 | 2 | 12 | 216 | 15 | 228 | 2.47e-43 | 146 |
| Msa0893190 | AT1G74590.1 | 37.838 | 222 | 132 | 3 | 6 | 221 | 8 | 229 | 7.47e-43 | 145 |
| Msa0893190 | AT1G69920.1 | 38.164 | 207 | 116 | 5 | 6 | 202 | 35 | 239 | 1.35e-42 | 145 |
| Msa0893190 | AT3G43800.1 | 39.713 | 209 | 115 | 6 | 1 | 202 | 1 | 205 | 1.76e-41 | 141 |
| Msa0893190 | AT1G78360.1 | 37.500 | 216 | 131 | 4 | 3 | 216 | 2 | 215 | 2.07e-41 | 140 |
| Msa0893190 | AT1G69930.1 | 35.545 | 211 | 130 | 2 | 6 | 210 | 13 | 223 | 3.67e-39 | 135 |
| Msa0893190 | AT1G27130.1 | 35.455 | 220 | 131 | 7 | 1 | 210 | 1 | 219 | 1.40e-37 | 131 |
| Msa0893190 | AT1G27140.1 | 36.321 | 212 | 125 | 5 | 1 | 202 | 1 | 212 | 1.61e-35 | 126 |
| Msa0893190 | AT1G78320.2 | 32.870 | 216 | 117 | 2 | 4 | 219 | 3 | 190 | 9.14e-34 | 120 |
| Msa0893190 | AT5G62480.2 | 30.986 | 213 | 114 | 2 | 12 | 216 | 15 | 202 | 1.44e-28 | 107 |
| Msa0893190 | AT5G62480.3 | 30.986 | 213 | 113 | 2 | 12 | 216 | 15 | 201 | 3.03e-28 | 106 |
| Msa0893190 | AT2G02390.2 | 41.667 | 96 | 52 | 2 | 2 | 94 | 5 | 99 | 9.56e-15 | 70.5 |
| Msa0893190 | AT2G02390.1 | 41.667 | 96 | 52 | 2 | 2 | 94 | 5 | 99 | 1.88e-14 | 70.1 |
| Msa0893190 | AT2G02380.1 | 41.304 | 92 | 50 | 2 | 6 | 94 | 12 | 102 | 2.27e-13 | 67.4 |
| Msa0893190 | AT2G02390.3 | 37.864 | 103 | 53 | 2 | 2 | 94 | 5 | 106 | 2.39e-13 | 67.4 |
Find 55 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGATAGAAGAGGAGATTA+AGG | 0.148070 | 6_1:-76091171 | Msa0893190:CDS |
| ATGCATTTCATGGCTGGTTT+AGG | 0.194117 | 6_1:-76090911 | Msa0893190:CDS |
| AAAGAGCTCTTGCTCGCTTT+TGG | 0.194907 | 6_1:-76091833 | Msa0893190:CDS |
| CACTTGGATGGATTTCTTAT+TGG | 0.201056 | 6_1:-76091103 | Msa0893190:CDS |
| GGGCGAGTCCAAATGCTATT+AGG | 0.217870 | 6_1:-76092070 | Msa0893190:CDS |
| CAACAAAAGCAGTCTCCTTT+TGG | 0.238706 | 6_1:-76091988 | Msa0893190:CDS |
| TGCATTTCATGGCTGGTTTA+GGG | 0.244296 | 6_1:-76090910 | Msa0893190:CDS |
| ATGTGAAGTTGGTCAGCTTT+TGG | 0.285798 | 6_1:-76092091 | Msa0893190:CDS |
| AAAGTTCCAGTTCTTGTTCA+TGG | 0.293506 | 6_1:-76091945 | Msa0893190:CDS |
| CACAGGGTGGTTGAGAAAAT+TGG | 0.324936 | 6_1:+76091004 | None:intergenic |
| GGCGAGTCCAAATGCTATTA+GGG | 0.336307 | 6_1:-76092069 | Msa0893190:CDS |
| ATTAAGGGGAAGAAATTCTT+TGG | 0.361287 | 6_1:-76091155 | Msa0893190:CDS |
| AAACAAGCATCTTGTCTCTT+GGG | 0.386025 | 6_1:+76090964 | None:intergenic |
| CACTCAACCCTAATAGCATT+TGG | 0.388273 | 6_1:+76092062 | None:intergenic |
| ATGTTTCATCAATGTATTCA+AGG | 0.395354 | 6_1:+76091892 | None:intergenic |
| TTCTGACCATGAACAAGAAC+TGG | 0.395430 | 6_1:+76091939 | None:intergenic |
| AGCTGACCAACTTCACATCT+TGG | 0.414575 | 6_1:+76092096 | None:intergenic |
| TTAAGGGGAAGAAATTCTTT+GGG | 0.414625 | 6_1:-76091154 | Msa0893190:CDS |
| TGTTTGATGCATTTCATGGC+TGG | 0.425305 | 6_1:-76090917 | Msa0893190:CDS |
| GCATTGTTTGATGCATTTCA+TGG | 0.426003 | 6_1:-76090921 | Msa0893190:CDS |
| TAAACAAGCATCTTGTCTCT+TGG | 0.433195 | 6_1:+76090963 | None:intergenic |
| AAGATAGAAGAGGAGATTAA+GGG | 0.438814 | 6_1:-76091170 | Msa0893190:CDS |
| ACCTTGACATTGCACTTGGA+TGG | 0.446170 | 6_1:-76091115 | Msa0893190:CDS |
| TTACTTTCACTCTCGTAGAA+AGG | 0.482693 | 6_1:-76090943 | Msa0893190:CDS |
| TAAGGGGAAGAAATTCTTTG+GGG | 0.491142 | 6_1:-76091153 | Msa0893190:CDS |
| GGCAAGCTGTCATTGATCAC+AGG | 0.503255 | 6_1:+76090987 | None:intergenic |
| GTGATGGCTGAATGTTTCAA+TGG | 0.509537 | 6_1:+76091038 | None:intergenic |
| AAACCGGGTTCAATTCCAAA+AGG | 0.513746 | 6_1:+76091973 | None:intergenic |
| TGAGGATGGTGAGGCAAAAG+TGG | 0.517868 | 6_1:+76091858 | None:intergenic |
| AGATAGAAGAGGAGATTAAG+GGG | 0.523184 | 6_1:-76091169 | Msa0893190:CDS |
| AACAAGCATCTTGTCTCTTG+GGG | 0.526950 | 6_1:+76090965 | None:intergenic |
| CAAGAGCTCTTTGATGAGGA+TGG | 0.547929 | 6_1:+76091844 | None:intergenic |
| GGGAAGCCAAGATGTGAAGT+TGG | 0.550319 | 6_1:-76092102 | Msa0893190:CDS |
| TAGTGGGGAAGAACAAGAAA+AGG | 0.553760 | 6_1:-76091222 | Msa0893190:CDS |
| GGGGAAGAAATTCTTTGGGG+GGG | 0.555270 | 6_1:-76091150 | Msa0893190:CDS |
| GGGTGGCAATGTGTAGTAGT+GGG | 0.560181 | 6_1:-76091238 | Msa0893190:CDS |
| TGATGGCTGAATGTTTCAAT+GGG | 0.563256 | 6_1:+76091039 | None:intergenic |
| AGGGGAAGAAATTCTTTGGG+GGG | 0.570087 | 6_1:-76091151 | Msa0893190:CDS |
| TGGGTGGCAATGTGTAGTAG+TGG | 0.580207 | 6_1:-76091239 | Msa0893190:CDS |
| AAATGCTATTAGGGTTGAGT+GGG | 0.580708 | 6_1:-76092060 | Msa0893190:CDS |
| AGCAATAGAGAAGATAGAAG+AGG | 0.584428 | 6_1:-76091180 | Msa0893190:CDS |
| GGGTACCTTGACATTGCACT+TGG | 0.587514 | 6_1:-76091119 | Msa0893190:CDS |
| CAAATGCTATTAGGGTTGAG+TGG | 0.596635 | 6_1:-76092061 | Msa0893190:CDS |
| AACATTCAGCCATCACTGCA+TGG | 0.598710 | 6_1:-76091031 | Msa0893190:CDS |
| TTGAATACATTGATGAAACA+TGG | 0.606392 | 6_1:-76091890 | Msa0893190:CDS |
| ATTGGTCATCCATGCAGTGA+TGG | 0.606643 | 6_1:+76091022 | None:intergenic |
| GAGTGGGCCTTAAAACTCAA+AGG | 0.607725 | 6_1:-76092044 | Msa0893190:CDS |
| TCCATCCAAGTGCAATGTCA+AGG | 0.611281 | 6_1:+76091114 | None:intergenic |
| AAGGGGAAGAAATTCTTTGG+GGG | 0.618537 | 6_1:-76091152 | Msa0893190:CDS |
| CGAGCAAGAGCTCTTTGATG+AGG | 0.630214 | 6_1:+76091840 | None:intergenic |
| GCTCTTTGATGAGGATGGTG+AGG | 0.637791 | 6_1:+76091849 | None:intergenic |
| GCAAGCTGTCATTGATCACA+GGG | 0.645559 | 6_1:+76090988 | None:intergenic |
| ACAAGCATCTTGTCTCTTGG+GGG | 0.676610 | 6_1:+76090966 | None:intergenic |
| GGTGGCAATGTGTAGTAGTG+GGG | 0.694384 | 6_1:-76091237 | Msa0893190:CDS |
| AGCTGTCATTGATCACAGGG+TGG | 0.734389 | 6_1:+76090991 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATAAAAAGGATTTTTTTAA+AGG | + | chr6_1:76091451-76091470 | None:intergenic | 10.0% |
| !!! | TTTAAAAAAATCCTTTTTAT+TGG | - | chr6_1:76091450-76091469 | Msa0893190:intron | 10.0% |
| !! | AAAAATTATTTCCAATAAAA+AGG | + | chr6_1:76091464-76091483 | None:intergenic | 10.0% |
| !!! | TAAGAATTTTTTTTTTTGAA+AGG | - | chr6_1:76091559-76091578 | Msa0893190:intron | 10.0% |
| !!! | AGTTCTTTTTTATTTTTTTA+TGG | + | chr6_1:76091694-76091713 | None:intergenic | 10.0% |
| !!! | AATAAAAAGGATTTTTTTAA+AGG | + | chr6_1:76091451-76091470 | None:intergenic | 10.0% |
| !!! | TTTAAAAAAATCCTTTTTAT+TGG | - | chr6_1:76091450-76091469 | Msa0893190:intron | 10.0% |
| !! | AAAAATTATTTCCAATAAAA+AGG | + | chr6_1:76091464-76091483 | None:intergenic | 10.0% |
| !!! | TAAGAATTTTTTTTTTTGAA+AGG | - | chr6_1:76091559-76091578 | Msa0893190:intron | 10.0% |
| !!! | AGTTCTTTTTTATTTTTTTA+TGG | + | chr6_1:76091694-76091713 | None:intergenic | 10.0% |
| !!! | CTTAATTTTTTTAAACCAAA+CGG | + | chr6_1:76091261-76091280 | None:intergenic | 15.0% |
| !!! | TTTGGTTTAAAAAAATTAAG+TGG | - | chr6_1:76091261-76091280 | Msa0893190:intron | 15.0% |
| !! | TTGGTTTAAAAAAATTAAGT+GGG | - | chr6_1:76091262-76091281 | Msa0893190:intron | 15.0% |
| !!! | TTAAGTACCTTATTTTTTAT+CGG | - | chr6_1:76091483-76091502 | Msa0893190:intron | 15.0% |
| !! | ATTATTTCCGATAAAAAATA+AGG | + | chr6_1:76091493-76091512 | None:intergenic | 15.0% |
| !! | TAAAGATTCATTCATAAATA+AGG | + | chr6_1:76091526-76091545 | None:intergenic | 15.0% |
| !!! | CTTAATTTTTTTAAACCAAA+CGG | + | chr6_1:76091261-76091280 | None:intergenic | 15.0% |
| !!! | TTTGGTTTAAAAAAATTAAG+TGG | - | chr6_1:76091261-76091280 | Msa0893190:intron | 15.0% |
| !! | TTGGTTTAAAAAAATTAAGT+GGG | - | chr6_1:76091262-76091281 | Msa0893190:intron | 15.0% |
| !!! | TTAAGTACCTTATTTTTTAT+CGG | - | chr6_1:76091483-76091502 | Msa0893190:intron | 15.0% |
| !! | ATTATTTCCGATAAAAAATA+AGG | + | chr6_1:76091493-76091512 | None:intergenic | 15.0% |
| !! | TAAAGATTCATTCATAAATA+AGG | + | chr6_1:76091526-76091545 | None:intergenic | 15.0% |
| !! | TTAAAAAAATTAAGTGGGAT+TGG | - | chr6_1:76091267-76091286 | Msa0893190:intron | 20.0% |
| !! | TTAAAAAAATTAAGTGGGAT+TGG | - | chr6_1:76091267-76091286 | Msa0893190:intron | 20.0% |
| !!! | ACTGGAACTTTTTTATAAAC+CGG | + | chr6_1:76091055-76091074 | None:intergenic | 25.0% |
| ! | ATGTTTCATCAATGTATTCA+AGG | + | chr6_1:76091120-76091139 | None:intergenic | 25.0% |
| ! | TTGAATACATTGATGAAACA+TGG | - | chr6_1:76091119-76091138 | Msa0893190:CDS | 25.0% |
| !!! | TAAAAAAATGGTATTTTGGG+CGG | + | chr6_1:76091377-76091396 | None:intergenic | 25.0% |
| !! | CCCTAAAAAAATGGTATTTT+GGG | + | chr6_1:76091380-76091399 | None:intergenic | 25.0% |
| !!! | CCCAAAATACCATTTTTTTA+GGG | - | chr6_1:76091377-76091396 | Msa0893190:intron | 25.0% |
| !!! | ATTTTAGTGCCCTAAAAAAA+TGG | + | chr6_1:76091389-76091408 | None:intergenic | 25.0% |
| !!! | AGGACACAATTTTATTGATT+CGG | - | chr6_1:76091579-76091598 | Msa0893190:intron | 25.0% |
| !!! | ACTGGAACTTTTTTATAAAC+CGG | + | chr6_1:76091055-76091074 | None:intergenic | 25.0% |
| ! | ATGTTTCATCAATGTATTCA+AGG | + | chr6_1:76091120-76091139 | None:intergenic | 25.0% |
| ! | TTGAATACATTGATGAAACA+TGG | - | chr6_1:76091119-76091138 | Msa0893190:CDS | 25.0% |
| !!! | TAAAAAAATGGTATTTTGGG+CGG | + | chr6_1:76091377-76091396 | None:intergenic | 25.0% |
| !! | CCCTAAAAAAATGGTATTTT+GGG | + | chr6_1:76091380-76091399 | None:intergenic | 25.0% |
| !!! | CCCAAAATACCATTTTTTTA+GGG | - | chr6_1:76091377-76091396 | Msa0893190:intron | 25.0% |
| !!! | ATTTTAGTGCCCTAAAAAAA+TGG | + | chr6_1:76091389-76091408 | None:intergenic | 25.0% |
| !!! | AGGACACAATTTTATTGATT+CGG | - | chr6_1:76091579-76091598 | Msa0893190:intron | 25.0% |
| !! | ATCAACACCTTTGAGTTTTA+AGG | + | chr6_1:76090975-76090994 | None:intergenic | 30.0% |
| !!! | CTGGAACTTTTTTATAAACC+GGG | + | chr6_1:76091054-76091073 | None:intergenic | 30.0% |
| AACGGATAAAGAAAAGGATT+TGG | + | chr6_1:76091243-76091262 | None:intergenic | 30.0% | |
| ! | AATCCTTTTCTTTATCCGTT+TGG | - | chr6_1:76091243-76091262 | Msa0893190:CDS | 30.0% |
| AAACCAAACGGATAAAGAAA+AGG | + | chr6_1:76091249-76091268 | None:intergenic | 30.0% | |
| !!! | GCCCAAAATACCATTTTTTT+AGG | - | chr6_1:76091376-76091395 | Msa0893190:intron | 30.0% |
| ! | GCCCTAAAAAAATGGTATTT+TGG | + | chr6_1:76091381-76091400 | None:intergenic | 30.0% |
| AAGATAGAAGAGGAGATTAA+GGG | - | chr6_1:76091839-76091858 | Msa0893190:CDS | 30.0% | |
| ATTAAGGGGAAGAAATTCTT+TGG | - | chr6_1:76091854-76091873 | Msa0893190:CDS | 30.0% | |
| TTAAGGGGAAGAAATTCTTT+GGG | - | chr6_1:76091855-76091874 | Msa0893190:CDS | 30.0% | |
| !!! | TTATTGGCTTCCTATTTTTG+AGG | - | chr6_1:76091922-76091941 | Msa0893190:CDS | 30.0% |
| !!! | TTCCTATTTTTGAGGAAGTT+GGG | - | chr6_1:76091930-76091949 | Msa0893190:CDS | 30.0% |
| !! | ATCAACACCTTTGAGTTTTA+AGG | + | chr6_1:76090975-76090994 | None:intergenic | 30.0% |
| !!! | CTGGAACTTTTTTATAAACC+GGG | + | chr6_1:76091054-76091073 | None:intergenic | 30.0% |
| AACGGATAAAGAAAAGGATT+TGG | + | chr6_1:76091243-76091262 | None:intergenic | 30.0% | |
| ! | AATCCTTTTCTTTATCCGTT+TGG | - | chr6_1:76091243-76091262 | Msa0893190:CDS | 30.0% |
| AAACCAAACGGATAAAGAAA+AGG | + | chr6_1:76091249-76091268 | None:intergenic | 30.0% | |
| !!! | GCCCAAAATACCATTTTTTT+AGG | - | chr6_1:76091376-76091395 | Msa0893190:intron | 30.0% |
| ! | GCCCTAAAAAAATGGTATTT+TGG | + | chr6_1:76091381-76091400 | None:intergenic | 30.0% |
| AAGATAGAAGAGGAGATTAA+GGG | - | chr6_1:76091839-76091858 | Msa0893190:CDS | 30.0% | |
| ATTAAGGGGAAGAAATTCTT+TGG | - | chr6_1:76091854-76091873 | Msa0893190:CDS | 30.0% | |
| TTAAGGGGAAGAAATTCTTT+GGG | - | chr6_1:76091855-76091874 | Msa0893190:CDS | 30.0% | |
| !!! | TTATTGGCTTCCTATTTTTG+AGG | - | chr6_1:76091922-76091941 | Msa0893190:CDS | 30.0% |
| !!! | TTCCTATTTTTGAGGAAGTT+GGG | - | chr6_1:76091930-76091949 | Msa0893190:CDS | 30.0% |
| AAATGCTATTAGGGTTGAGT+GGG | - | chr6_1:76090949-76090968 | Msa0893190:CDS | 35.0% | |
| AAAGTTCCAGTTCTTGTTCA+TGG | - | chr6_1:76091064-76091083 | Msa0893190:CDS | 35.0% | |
| ! | GGCTAATTTTGCTGAACAAA+AGG | - | chr6_1:76091198-76091217 | Msa0893190:CDS | 35.0% |
| AGTGCGATACTATCATACTA+TGG | + | chr6_1:76091313-76091332 | None:intergenic | 35.0% | |
| !!! | CAATTTTATTGATTCGGCCA+AGG | - | chr6_1:76091585-76091604 | Msa0893190:intron | 35.0% |
| AACTCAAAAGAGACATTGAG+AGG | + | chr6_1:76091636-76091655 | None:intergenic | 35.0% | |
| CTATGACATATGCACAACAT+AGG | + | chr6_1:76091735-76091754 | None:intergenic | 35.0% | |
| ! | TGTGCATATGTCATAGCTTT+TGG | - | chr6_1:76091739-76091758 | Msa0893190:intron | 35.0% |
| AGCAATAGAGAAGATAGAAG+AGG | - | chr6_1:76091829-76091848 | Msa0893190:CDS | 35.0% | |
| GAAGATAGAAGAGGAGATTA+AGG | - | chr6_1:76091838-76091857 | Msa0893190:CDS | 35.0% | |
| AGATAGAAGAGGAGATTAAG+GGG | - | chr6_1:76091840-76091859 | Msa0893190:CDS | 35.0% | |
| TAAGGGGAAGAAATTCTTTG+GGG | - | chr6_1:76091856-76091875 | Msa0893190:CDS | 35.0% | |
| ! | CACTTGGATGGATTTCTTAT+TGG | - | chr6_1:76091906-76091925 | Msa0893190:CDS | 35.0% |
| !!! | CTTCCTATTTTTGAGGAAGT+TGG | - | chr6_1:76091929-76091948 | Msa0893190:CDS | 35.0% |
| TGATGGCTGAATGTTTCAAT+GGG | + | chr6_1:76091973-76091992 | None:intergenic | 35.0% | |
| AAACAAGCATCTTGTCTCTT+GGG | + | chr6_1:76092048-76092067 | None:intergenic | 35.0% | |
| TAAACAAGCATCTTGTCTCT+TGG | + | chr6_1:76092049-76092068 | None:intergenic | 35.0% | |
| TTACTTTCACTCTCGTAGAA+AGG | - | chr6_1:76092066-76092085 | Msa0893190:CDS | 35.0% | |
| GCATTGTTTGATGCATTTCA+TGG | - | chr6_1:76092088-76092107 | Msa0893190:CDS | 35.0% | |
| AAATGCTATTAGGGTTGAGT+GGG | - | chr6_1:76090949-76090968 | Msa0893190:CDS | 35.0% | |
| AAAGTTCCAGTTCTTGTTCA+TGG | - | chr6_1:76091064-76091083 | Msa0893190:CDS | 35.0% | |
| ! | GGCTAATTTTGCTGAACAAA+AGG | - | chr6_1:76091198-76091217 | Msa0893190:CDS | 35.0% |
| AGTGCGATACTATCATACTA+TGG | + | chr6_1:76091313-76091332 | None:intergenic | 35.0% | |
| !!! | CAATTTTATTGATTCGGCCA+AGG | - | chr6_1:76091585-76091604 | Msa0893190:intron | 35.0% |
| AACTCAAAAGAGACATTGAG+AGG | + | chr6_1:76091636-76091655 | None:intergenic | 35.0% | |
| CTATGACATATGCACAACAT+AGG | + | chr6_1:76091735-76091754 | None:intergenic | 35.0% | |
| ! | TGTGCATATGTCATAGCTTT+TGG | - | chr6_1:76091739-76091758 | Msa0893190:intron | 35.0% |
| AGCAATAGAGAAGATAGAAG+AGG | - | chr6_1:76091829-76091848 | Msa0893190:CDS | 35.0% | |
| GAAGATAGAAGAGGAGATTA+AGG | - | chr6_1:76091838-76091857 | Msa0893190:CDS | 35.0% | |
| AGATAGAAGAGGAGATTAAG+GGG | - | chr6_1:76091840-76091859 | Msa0893190:CDS | 35.0% | |
| TAAGGGGAAGAAATTCTTTG+GGG | - | chr6_1:76091856-76091875 | Msa0893190:CDS | 35.0% | |
| ! | CACTTGGATGGATTTCTTAT+TGG | - | chr6_1:76091906-76091925 | Msa0893190:CDS | 35.0% |
| !!! | CTTCCTATTTTTGAGGAAGT+TGG | - | chr6_1:76091929-76091948 | Msa0893190:CDS | 35.0% |
| TGATGGCTGAATGTTTCAAT+GGG | + | chr6_1:76091973-76091992 | None:intergenic | 35.0% | |
| AAACAAGCATCTTGTCTCTT+GGG | + | chr6_1:76092048-76092067 | None:intergenic | 35.0% | |
| TAAACAAGCATCTTGTCTCT+TGG | + | chr6_1:76092049-76092068 | None:intergenic | 35.0% | |
| TTACTTTCACTCTCGTAGAA+AGG | - | chr6_1:76092066-76092085 | Msa0893190:CDS | 35.0% | |
| GCATTGTTTGATGCATTTCA+TGG | - | chr6_1:76092088-76092107 | Msa0893190:CDS | 35.0% | |
| !! | ATGTGAAGTTGGTCAGCTTT+TGG | - | chr6_1:76090918-76090937 | Msa0893190:CDS | 40.0% |
| !! | TGTGAAGTTGGTCAGCTTTT+GGG | - | chr6_1:76090919-76090938 | Msa0893190:CDS | 40.0% |
| CACTCAACCCTAATAGCATT+TGG | + | chr6_1:76090950-76090969 | None:intergenic | 40.0% | |
| CAAATGCTATTAGGGTTGAG+TGG | - | chr6_1:76090948-76090967 | Msa0893190:CDS | 40.0% | |
| ! | CAACAAAAGCAGTCTCCTTT+TGG | - | chr6_1:76091021-76091040 | Msa0893190:CDS | 40.0% |
| !!! | TCTCCTTTTGGAATTGAACC+CGG | - | chr6_1:76091033-76091052 | Msa0893190:CDS | 40.0% |
| AAACCGGGTTCAATTCCAAA+AGG | + | chr6_1:76091039-76091058 | None:intergenic | 40.0% | |
| TTCTGACCATGAACAAGAAC+TGG | + | chr6_1:76091073-76091092 | None:intergenic | 40.0% | |
| ATAGTATCGCACTCTCAATC+AGG | - | chr6_1:76091320-76091339 | Msa0893190:intron | 40.0% | |
| TAGTATCGCACTCTCAATCA+GGG | - | chr6_1:76091321-76091340 | Msa0893190:intron | 40.0% | |
| CAAAAGAGACATTGAGAGGA+GGG | + | chr6_1:76091632-76091651 | None:intergenic | 40.0% | |
| TCAAAAGAGACATTGAGAGG+AGG | + | chr6_1:76091633-76091652 | None:intergenic | 40.0% | |
| ! | ATAGCTTTTGGATGCAGCAT+GGG | - | chr6_1:76091751-76091770 | Msa0893190:intron | 40.0% |
| TAGTGGGGAAGAACAAGAAA+AGG | - | chr6_1:76091787-76091806 | Msa0893190:intron | 40.0% | |
| AAGGGGAAGAAATTCTTTGG+GGG | - | chr6_1:76091857-76091876 | Msa0893190:CDS | 40.0% | |
| GACCCAACTTCCTCAAAAAT+AGG | + | chr6_1:76091935-76091954 | None:intergenic | 40.0% | |
| GTGATGGCTGAATGTTTCAA+TGG | + | chr6_1:76091974-76091993 | None:intergenic | 40.0% | |
| AACAAGCATCTTGTCTCTTG+GGG | + | chr6_1:76092047-76092066 | None:intergenic | 40.0% | |
| TGTTTGATGCATTTCATGGC+TGG | - | chr6_1:76092092-76092111 | Msa0893190:CDS | 40.0% | |
| !! | ATGCATTTCATGGCTGGTTT+AGG | - | chr6_1:76092098-76092117 | Msa0893190:CDS | 40.0% |
| !! | TGCATTTCATGGCTGGTTTA+GGG | - | chr6_1:76092099-76092118 | Msa0893190:CDS | 40.0% |
| !! | ATGTGAAGTTGGTCAGCTTT+TGG | - | chr6_1:76090918-76090937 | Msa0893190:CDS | 40.0% |
| !! | TGTGAAGTTGGTCAGCTTTT+GGG | - | chr6_1:76090919-76090938 | Msa0893190:CDS | 40.0% |
| CACTCAACCCTAATAGCATT+TGG | + | chr6_1:76090950-76090969 | None:intergenic | 40.0% | |
| CAAATGCTATTAGGGTTGAG+TGG | - | chr6_1:76090948-76090967 | Msa0893190:CDS | 40.0% | |
| ! | CAACAAAAGCAGTCTCCTTT+TGG | - | chr6_1:76091021-76091040 | Msa0893190:CDS | 40.0% |
| !!! | TCTCCTTTTGGAATTGAACC+CGG | - | chr6_1:76091033-76091052 | Msa0893190:CDS | 40.0% |
| AAACCGGGTTCAATTCCAAA+AGG | + | chr6_1:76091039-76091058 | None:intergenic | 40.0% | |
| TTCTGACCATGAACAAGAAC+TGG | + | chr6_1:76091073-76091092 | None:intergenic | 40.0% | |
| ATAGTATCGCACTCTCAATC+AGG | - | chr6_1:76091320-76091339 | Msa0893190:intron | 40.0% | |
| TAGTATCGCACTCTCAATCA+GGG | - | chr6_1:76091321-76091340 | Msa0893190:intron | 40.0% | |
| CAAAAGAGACATTGAGAGGA+GGG | + | chr6_1:76091632-76091651 | None:intergenic | 40.0% | |
| TCAAAAGAGACATTGAGAGG+AGG | + | chr6_1:76091633-76091652 | None:intergenic | 40.0% | |
| ! | ATAGCTTTTGGATGCAGCAT+GGG | - | chr6_1:76091751-76091770 | Msa0893190:intron | 40.0% |
| TAGTGGGGAAGAACAAGAAA+AGG | - | chr6_1:76091787-76091806 | Msa0893190:intron | 40.0% | |
| AAGGGGAAGAAATTCTTTGG+GGG | - | chr6_1:76091857-76091876 | Msa0893190:CDS | 40.0% | |
| GACCCAACTTCCTCAAAAAT+AGG | + | chr6_1:76091935-76091954 | None:intergenic | 40.0% | |
| GTGATGGCTGAATGTTTCAA+TGG | + | chr6_1:76091974-76091993 | None:intergenic | 40.0% | |
| AACAAGCATCTTGTCTCTTG+GGG | + | chr6_1:76092047-76092066 | None:intergenic | 40.0% | |
| TGTTTGATGCATTTCATGGC+TGG | - | chr6_1:76092092-76092111 | Msa0893190:CDS | 40.0% | |
| !! | ATGCATTTCATGGCTGGTTT+AGG | - | chr6_1:76092098-76092117 | Msa0893190:CDS | 40.0% |
| !! | TGCATTTCATGGCTGGTTTA+GGG | - | chr6_1:76092099-76092118 | Msa0893190:CDS | 40.0% |
| AGCTGACCAACTTCACATCT+TGG | + | chr6_1:76090916-76090935 | None:intergenic | 45.0% | |
| GGCGAGTCCAAATGCTATTA+GGG | - | chr6_1:76090940-76090959 | Msa0893190:CDS | 45.0% | |
| GAGTGGGCCTTAAAACTCAA+AGG | - | chr6_1:76090965-76090984 | Msa0893190:CDS | 45.0% | |
| CAAGAGCTCTTTGATGAGGA+TGG | + | chr6_1:76091168-76091187 | None:intergenic | 45.0% | |
| ! | AAAGAGCTCTTGCTCGCTTT+TGG | - | chr6_1:76091176-76091195 | Msa0893190:CDS | 45.0% |
| !! | AAGAGCTCTTGCTCGCTTTT+GGG | - | chr6_1:76091177-76091196 | Msa0893190:CDS | 45.0% |
| AGTATCGCACTCTCAATCAG+GGG | - | chr6_1:76091322-76091341 | Msa0893190:intron | 45.0% | |
| !!! | TCCTAAGACTTTTGGTGCCT+TGG | + | chr6_1:76091605-76091624 | None:intergenic | 45.0% |
| ! | CATAGCTTTTGGATGCAGCA+TGG | - | chr6_1:76091750-76091769 | Msa0893190:intron | 45.0% |
| AGGGGAAGAAATTCTTTGGG+GGG | - | chr6_1:76091858-76091877 | Msa0893190:CDS | 45.0% | |
| ! | TTCTTTGGGGGGGACAATAT+AGG | - | chr6_1:76091869-76091888 | Msa0893190:CDS | 45.0% |
| ! | TCTTTGGGGGGGACAATATA+GGG | - | chr6_1:76091870-76091889 | Msa0893190:CDS | 45.0% |
| ACCTTGACATTGCACTTGGA+TGG | - | chr6_1:76091894-76091913 | Msa0893190:CDS | 45.0% | |
| TCCATCCAAGTGCAATGTCA+AGG | + | chr6_1:76091898-76091917 | None:intergenic | 45.0% | |
| AACATTCAGCCATCACTGCA+TGG | - | chr6_1:76091978-76091997 | Msa0893190:CDS | 45.0% | |
| ATTGGTCATCCATGCAGTGA+TGG | + | chr6_1:76091990-76092009 | None:intergenic | 45.0% | |
| CACAGGGTGGTTGAGAAAAT+TGG | + | chr6_1:76092008-76092027 | None:intergenic | 45.0% | |
| GCAAGCTGTCATTGATCACA+GGG | + | chr6_1:76092024-76092043 | None:intergenic | 45.0% | |
| ACAAGCATCTTGTCTCTTGG+GGG | + | chr6_1:76092046-76092065 | None:intergenic | 45.0% | |
| AGCTGACCAACTTCACATCT+TGG | + | chr6_1:76090916-76090935 | None:intergenic | 45.0% | |
| GGCGAGTCCAAATGCTATTA+GGG | - | chr6_1:76090940-76090959 | Msa0893190:CDS | 45.0% | |
| GAGTGGGCCTTAAAACTCAA+AGG | - | chr6_1:76090965-76090984 | Msa0893190:CDS | 45.0% | |
| CAAGAGCTCTTTGATGAGGA+TGG | + | chr6_1:76091168-76091187 | None:intergenic | 45.0% | |
| ! | AAAGAGCTCTTGCTCGCTTT+TGG | - | chr6_1:76091176-76091195 | Msa0893190:CDS | 45.0% |
| !! | AAGAGCTCTTGCTCGCTTTT+GGG | - | chr6_1:76091177-76091196 | Msa0893190:CDS | 45.0% |
| AGTATCGCACTCTCAATCAG+GGG | - | chr6_1:76091322-76091341 | Msa0893190:intron | 45.0% | |
| !!! | TCCTAAGACTTTTGGTGCCT+TGG | + | chr6_1:76091605-76091624 | None:intergenic | 45.0% |
| ! | CATAGCTTTTGGATGCAGCA+TGG | - | chr6_1:76091750-76091769 | Msa0893190:intron | 45.0% |
| AGGGGAAGAAATTCTTTGGG+GGG | - | chr6_1:76091858-76091877 | Msa0893190:CDS | 45.0% | |
| ! | TTCTTTGGGGGGGACAATAT+AGG | - | chr6_1:76091869-76091888 | Msa0893190:CDS | 45.0% |
| ! | TCTTTGGGGGGGACAATATA+GGG | - | chr6_1:76091870-76091889 | Msa0893190:CDS | 45.0% |
| ACCTTGACATTGCACTTGGA+TGG | - | chr6_1:76091894-76091913 | Msa0893190:CDS | 45.0% | |
| TCCATCCAAGTGCAATGTCA+AGG | + | chr6_1:76091898-76091917 | None:intergenic | 45.0% | |
| AACATTCAGCCATCACTGCA+TGG | - | chr6_1:76091978-76091997 | Msa0893190:CDS | 45.0% | |
| ATTGGTCATCCATGCAGTGA+TGG | + | chr6_1:76091990-76092009 | None:intergenic | 45.0% | |
| CACAGGGTGGTTGAGAAAAT+TGG | + | chr6_1:76092008-76092027 | None:intergenic | 45.0% | |
| GCAAGCTGTCATTGATCACA+GGG | + | chr6_1:76092024-76092043 | None:intergenic | 45.0% | |
| ACAAGCATCTTGTCTCTTGG+GGG | + | chr6_1:76092046-76092065 | None:intergenic | 45.0% | |
| GGGAAGCCAAGATGTGAAGT+TGG | - | chr6_1:76090907-76090926 | Msa0893190:CDS | 50.0% | |
| GGGCGAGTCCAAATGCTATT+AGG | - | chr6_1:76090939-76090958 | Msa0893190:CDS | 50.0% | |
| TGAGGATGGTGAGGCAAAAG+TGG | + | chr6_1:76091154-76091173 | None:intergenic | 50.0% | |
| GCTCTTTGATGAGGATGGTG+AGG | + | chr6_1:76091163-76091182 | None:intergenic | 50.0% | |
| CGAGCAAGAGCTCTTTGATG+AGG | + | chr6_1:76091172-76091191 | None:intergenic | 50.0% | |
| ! | GCCAAGGCACCAAAAGTCTT+AGG | - | chr6_1:76091601-76091620 | Msa0893190:intron | 50.0% |
| ! | AGGGTCGGTCCTAAGACTTT+TGG | + | chr6_1:76091613-76091632 | None:intergenic | 50.0% |
| AGAGACATTGAGAGGAGGGT+CGG | + | chr6_1:76091628-76091647 | None:intergenic | 50.0% | |
| TGGGTGGCAATGTGTAGTAG+TGG | - | chr6_1:76091770-76091789 | Msa0893190:intron | 50.0% | |
| GGGTGGCAATGTGTAGTAGT+GGG | - | chr6_1:76091771-76091790 | Msa0893190:intron | 50.0% | |
| GGTGGCAATGTGTAGTAGTG+GGG | - | chr6_1:76091772-76091791 | Msa0893190:intron | 50.0% | |
| ! | GGGGAAGAAATTCTTTGGGG+GGG | - | chr6_1:76091859-76091878 | Msa0893190:CDS | 50.0% |
| GGGTACCTTGACATTGCACT+TGG | - | chr6_1:76091890-76091909 | Msa0893190:CDS | 50.0% | |
| AGCTGTCATTGATCACAGGG+TGG | + | chr6_1:76092021-76092040 | None:intergenic | 50.0% | |
| GGCAAGCTGTCATTGATCAC+AGG | + | chr6_1:76092025-76092044 | None:intergenic | 50.0% | |
| GGGAAGCCAAGATGTGAAGT+TGG | - | chr6_1:76090907-76090926 | Msa0893190:CDS | 50.0% | |
| GGGCGAGTCCAAATGCTATT+AGG | - | chr6_1:76090939-76090958 | Msa0893190:CDS | 50.0% | |
| TGAGGATGGTGAGGCAAAAG+TGG | + | chr6_1:76091154-76091173 | None:intergenic | 50.0% | |
| GCTCTTTGATGAGGATGGTG+AGG | + | chr6_1:76091163-76091182 | None:intergenic | 50.0% | |
| CGAGCAAGAGCTCTTTGATG+AGG | + | chr6_1:76091172-76091191 | None:intergenic | 50.0% | |
| ! | GCCAAGGCACCAAAAGTCTT+AGG | - | chr6_1:76091601-76091620 | Msa0893190:intron | 50.0% |
| ! | AGGGTCGGTCCTAAGACTTT+TGG | + | chr6_1:76091613-76091632 | None:intergenic | 50.0% |
| AGAGACATTGAGAGGAGGGT+CGG | + | chr6_1:76091628-76091647 | None:intergenic | 50.0% | |
| TGGGTGGCAATGTGTAGTAG+TGG | - | chr6_1:76091770-76091789 | Msa0893190:intron | 50.0% | |
| GGGTGGCAATGTGTAGTAGT+GGG | - | chr6_1:76091771-76091790 | Msa0893190:intron | 50.0% | |
| GGTGGCAATGTGTAGTAGTG+GGG | - | chr6_1:76091772-76091791 | Msa0893190:intron | 50.0% | |
| ! | GGGGAAGAAATTCTTTGGGG+GGG | - | chr6_1:76091859-76091878 | Msa0893190:CDS | 50.0% |
| GGGTACCTTGACATTGCACT+TGG | - | chr6_1:76091890-76091909 | Msa0893190:CDS | 50.0% | |
| AGCTGTCATTGATCACAGGG+TGG | + | chr6_1:76092021-76092040 | None:intergenic | 50.0% | |
| GGCAAGCTGTCATTGATCAC+AGG | + | chr6_1:76092025-76092044 | None:intergenic | 50.0% | |
| ATCGCACTCTCAATCAGGGG+TGG | - | chr6_1:76091325-76091344 | Msa0893190:intron | 55.0% | |
| ATCAGGGGTGGCCATGAGTA+TGG | - | chr6_1:76091337-76091356 | Msa0893190:intron | 55.0% | |
| TCAGGGGTGGCCATGAGTAT+GGG | - | chr6_1:76091338-76091357 | Msa0893190:intron | 55.0% | |
| ACCTCTCCCACCCATACTCA+TGG | + | chr6_1:76091351-76091370 | None:intergenic | 55.0% | |
| ATGAGTATGGGTGGGAGAGG+TGG | - | chr6_1:76091350-76091369 | Msa0893190:intron | 55.0% | |
| TGAGTATGGGTGGGAGAGGT+GGG | - | chr6_1:76091351-76091370 | Msa0893190:intron | 55.0% | |
| ! | GCTTTTGGATGCAGCATGGG+TGG | - | chr6_1:76091754-76091773 | Msa0893190:intron | 55.0% |
| ATCGCACTCTCAATCAGGGG+TGG | - | chr6_1:76091325-76091344 | Msa0893190:intron | 55.0% | |
| ATCAGGGGTGGCCATGAGTA+TGG | - | chr6_1:76091337-76091356 | Msa0893190:intron | 55.0% | |
| TCAGGGGTGGCCATGAGTAT+GGG | - | chr6_1:76091338-76091357 | Msa0893190:intron | 55.0% | |
| ACCTCTCCCACCCATACTCA+TGG | + | chr6_1:76091351-76091370 | None:intergenic | 55.0% | |
| ATGAGTATGGGTGGGAGAGG+TGG | - | chr6_1:76091350-76091369 | Msa0893190:intron | 55.0% | |
| TGAGTATGGGTGGGAGAGGT+GGG | - | chr6_1:76091351-76091370 | Msa0893190:intron | 55.0% | |
| ! | GCTTTTGGATGCAGCATGGG+TGG | - | chr6_1:76091754-76091773 | Msa0893190:intron | 55.0% |
| GGGTGGCCATGAGTATGGGT+GGG | - | chr6_1:76091342-76091361 | Msa0893190:intron | 60.0% | |
| GCCATGAGTATGGGTGGGAG+AGG | - | chr6_1:76091347-76091366 | Msa0893190:intron | 60.0% | |
| GGGTGGCCATGAGTATGGGT+GGG | - | chr6_1:76091342-76091361 | Msa0893190:intron | 60.0% | |
| GCCATGAGTATGGGTGGGAG+AGG | - | chr6_1:76091347-76091366 | Msa0893190:intron | 60.0% | |
| GGGGTGGCCATGAGTATGGG+TGG | - | chr6_1:76091341-76091360 | Msa0893190:intron | 65.0% | |
| GGGGTGGCCATGAGTATGGG+TGG | - | chr6_1:76091341-76091360 | Msa0893190:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 76090905 | 76092126 | 76090905 | ID=Msa0893190;Name=Msa0893190 |
| chr6_1 | mRNA | 76090905 | 76092126 | 76090905 | ID=Msa0893190-mRNA-1;Parent=Msa0893190;Name=Msa0893190-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0|0|1|1|1|2|0|228 |
| chr6_1 | exon | 76091812 | 76092126 | 76091812 | ID=Msa0893190-mRNA-1:exon:12767;Parent=Msa0893190-mRNA-1 |
| chr6_1 | exon | 76090905 | 76091276 | 76090905 | ID=Msa0893190-mRNA-1:exon:12766;Parent=Msa0893190-mRNA-1 |
| chr6_1 | CDS | 76091812 | 76092126 | 76091812 | ID=Msa0893190-mRNA-1:cds;Parent=Msa0893190-mRNA-1 |
| chr6_1 | CDS | 76090905 | 76091276 | 76090905 | ID=Msa0893190-mRNA-1:cds;Parent=Msa0893190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
