AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0894550

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0894550 MtrunA17_Chr6g0486531 86.928 153 20 0 73 225 844 996 3.70e-83 267
Msa0894550 MtrunA17_Chr6g0486531 53.252 246 79 2 15 224 509 754 1.18e-74 244
Msa0894550 MtrunA17_Chr6g0486321 64.706 153 24 2 73 225 34 156 4.99e-54 171
Msa0894550 MtrunA17_Chr6g0486491 67.593 108 21 1 96 203 1 94 6.86e-42 137
Msa0894550 MtrunA17_Chr6g0486241 73.077 104 14 1 73 176 38 127 2.13e-39 134
Msa0894550 MtrunA17_Chr2g0299581 64.912 114 25 2 113 225 34 133 5.61e-39 133
Msa0894550 MtrunA17_Chr6g0460441 47.260 146 56 1 79 224 13 137 6.12e-36 124
Msa0894550 MtrunA17_Chr6g0484381 60.000 115 17 1 111 225 37 122 4.18e-34 120
Msa0894550 MtrunA17_Chr6g0486211 81.429 70 13 0 72 141 12 81 8.10e-32 111
Msa0894550 MtrunA17_Chr6g0486461 90.000 50 5 0 176 225 8 57 8.29e-24 91.7
Msa0894550 MtrunA17_Chr2g0299591 88.000 50 6 0 73 122 15 64 1.29e-22 87.4
Msa0894550 MtrunA17_Chr6g0486281 85.106 47 7 0 174 220 1 47 1.45e-20 81.3
Msa0894550 MtrunA17_Chr6g0477831 50.633 79 39 0 123 201 12 90 1.67e-19 80.1
Msa0894550 MtrunA17_Chr6g0448841 45.133 113 59 2 66 177 14 124 5.86e-19 84.0
Msa0894550 MtrunA17_Chr6g0486301 45.122 82 35 1 139 220 1033 1104 6.14e-14 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0894550 AT4G29060.1 77.333 150 34 0 76 225 754 903 6.34e-70 230
Msa0894550 AT4G29060.1 69.863 146 44 0 79 224 519 664 3.08e-63 212
Msa0894550 AT4G29060.2 70.748 147 37 1 79 225 519 659 6.24e-62 205
Msa0894550 AT4G11120.1 42.735 117 62 3 52 166 46 159 9.27e-17 78.6

Find 328 sgRNAs with CRISPR-Local

Find 531 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTCCCTCTCACCCAATTT+TGG 0.139288 6_1:+80554733 None:intergenic
TTCTGTTTCTTTGGCTGATA+TGG 0.165426 6_1:+80553793 None:intergenic
TGGCTAGAAAGATTAAATTT+AGG 0.167667 6_1:-80554973 Msa0894550:five_prime_UTR
AAAGCTTGTTTACTTGAATT+TGG 0.181954 6_1:-80555308 Msa0894550:five_prime_UTR
TTTGGTGCGTTTGTTGATTT+TGG 0.187251 6_1:-80553542 Msa0894550:five_prime_UTR
ACAATAATTGATTGGTTTAC+TGG 0.192876 6_1:+80558009 None:intergenic
CTAGAAAAGATAATAGATTT+TGG 0.199854 6_1:-80555412 Msa0894550:five_prime_UTR
TATGAGTAATTATGAAAATT+TGG 0.204510 6_1:-80556410 Msa0894550:five_prime_UTR
CACGGATACTTCTGTTTCTT+TGG 0.210977 6_1:+80553784 None:intergenic
TCATCTGCAACAGGTGAATT+TGG 0.213637 6_1:+80553755 None:intergenic
GGCTCGGAAATGCAAGATTT+TGG 0.220530 6_1:-80554215 Msa0894550:five_prime_UTR
TAGATCCAATGTCCTCAAAT+TGG 0.223757 6_1:+80555450 None:intergenic
GTGTTCGTGCTATAGGAATT+TGG 0.237140 6_1:-80556888 Msa0894550:five_prime_UTR
TTGTTATTGTCATGCATAAT+TGG 0.242300 6_1:+80554556 None:intergenic
CGAGAGTGCTATCATGAATT+TGG 0.245129 6_1:-80554361 Msa0894550:five_prime_UTR
AACATACCCAACAACATATT+TGG 0.253821 6_1:-80555265 Msa0894550:five_prime_UTR
GGCTCAACTGTCTCTGTTGC+AGG 0.255865 6_1:+80552746 None:intergenic
TTCATTCATTTCAAAAGATT+TGG 0.257344 6_1:-80556971 Msa0894550:five_prime_UTR
AGATTTAGCTTCTCAAGATT+TGG 0.258099 6_1:+80555382 None:intergenic
GAGCATATATTGAAAGAGTA+TGG 0.259539 6_1:-80556523 Msa0894550:five_prime_UTR
ATGGATGATGCAATTCATTA+AGG 0.262168 6_1:-80554689 Msa0894550:five_prime_UTR
TTTAAAATTACAGAATATTC+AGG 0.269878 6_1:-80554328 Msa0894550:five_prime_UTR
GGCTAGAAAGATTAAATTTA+GGG 0.272492 6_1:-80554972 Msa0894550:five_prime_UTR
CTATGCCGAGAGTTTGAAAT+AGG 0.273768 6_1:+80556722 None:intergenic
CAACTTGGTATTTCACTTCC+TGG 0.273996 6_1:+80554625 None:intergenic
TTGCTAAGTTGAACTCTTGT+AGG 0.276303 6_1:+80554260 None:intergenic
ACCAAATCCTCATTCTTTAC+AGG 0.301884 6_1:+80553608 None:intergenic
ATTACAAAATCATTTACTTT+TGG 0.303922 6_1:-80556923 Msa0894550:five_prime_UTR
CTTGAGGATTCAATGATAAC+AGG 0.307821 6_1:+80552719 None:intergenic
ACCCTTGCTATGGATTTATA+TGG 0.309480 6_1:-80556841 Msa0894550:five_prime_UTR
TGTTCGTGCTATAGGAATTT+GGG 0.310129 6_1:-80556887 Msa0894550:five_prime_UTR
CAACAATCATAAACTGATAA+TGG 0.310238 6_1:-80552785 Msa0894550:exon
TCCTTCAGCTGCTAGTCTTC+CGG 0.310289 6_1:+80550540 None:intergenic
TATCCATAGGTGACTTGATT+TGG 0.312621 6_1:+80554396 None:intergenic
CAATGTTATGAATGAGAAAA+TGG 0.314195 6_1:-80555954 Msa0894550:intron
CGATGGATTCGGGAATATAA+TGG 0.316965 6_1:-80553161 Msa0894550:five_prime_UTR
CTTCAATTCTACAAGTTCAT+TGG 0.318544 6_1:+80555635 None:intergenic
TCACTCATAAGCATAGAAAA+TGG 0.321400 6_1:-80556088 Msa0894550:five_prime_UTR
TTCAATTCTACAAGTTCATT+GGG 0.324926 6_1:+80555636 None:intergenic
AGGAAGATGGCGATGGATTC+GGG 0.325331 6_1:-80553171 Msa0894550:five_prime_UTR
CAAGTTTAAATATACAAGTT+TGG 0.330101 6_1:+80554909 None:intergenic
GAGGAAGATGGCGATGGATT+CGG 0.330444 6_1:-80553172 Msa0894550:five_prime_UTR
GATTTAGCTTCTCAAGATTT+GGG 0.336452 6_1:+80555383 None:intergenic
CACAAAATTTGTTGTAGGTT+AGG 0.337629 6_1:-80553265 Msa0894550:five_prime_UTR
CCGGATTTCTCTGTATTGTT+TGG 0.339087 6_1:+80553338 None:intergenic
TCCTGTAAAGAATGAGGATT+TGG 0.339661 6_1:-80553609 Msa0894550:five_prime_UTR
GAAGTAGTTATGACTTGTTC+TGG 0.343479 6_1:+80554160 None:intergenic
CTCAACATTATACAAATATA+TGG 0.343990 6_1:+80555812 None:intergenic
TCGTAGGCTACGTTGTAAAA+AGG 0.345614 6_1:-80556653 Msa0894550:five_prime_UTR
GGAAAATCTTTGTTGGAGAT+TGG 0.350910 6_1:-80553139 Msa0894550:five_prime_UTR
ATACTTTCATCGAGAATTGC+TGG 0.351035 6_1:+80554427 None:intergenic
CCATTAGCAATTACAGTATT+GGG 0.353373 6_1:-80556355 Msa0894550:five_prime_UTR
AAGAATGAGGATTTGGTTCC+CGG 0.354645 6_1:-80553602 Msa0894550:five_prime_UTR
GAAATCACAAAATTTGTTGT+AGG 0.358719 6_1:-80553270 Msa0894550:five_prime_UTR
CTGAATATACAAGTGTTTAG+AGG 0.359501 6_1:+80557890 None:intergenic
AGAAACCGGTGCAGGGATAA+TGG 0.359757 6_1:-80550656 Msa0894550:CDS
TGTGGATTTCATGCTGATAT+TGG 0.365713 6_1:-80556133 Msa0894550:five_prime_UTR
GACCAAGGAAGTGTTATAAA+TGG 0.367748 6_1:-80552998 Msa0894550:five_prime_UTR
GATGACACTAATCTTCAAAA+AGG 0.370396 6_1:-80557711 Msa0894550:five_prime_UTR
GCTTACATCATCAATGAAAC+AGG 0.371102 6_1:+80556792 None:intergenic
CATCAAATCGATGAGAGATT+TGG 0.372400 6_1:+80556818 None:intergenic
TGTGATTTCCTATCTTTCCT+TGG 0.374590 6_1:+80553284 None:intergenic
ACCATTAGCAATTACAGTAT+TGG 0.377852 6_1:-80556356 Msa0894550:five_prime_UTR
GATGTGTTTGTCACCTTTAG+AGG 0.383369 6_1:-80557807 Msa0894550:five_prime_UTR
CACTGATTGTCAGGCAAGAA+AGG 0.383554 6_1:+80552410 None:intergenic
GCATGAAGGTGGAGAGTTGC+GGG 0.386580 6_1:-80554306 Msa0894550:five_prime_UTR
AGAGCAAGATTAAACAACTA+TGG 0.389511 6_1:-80555605 Msa0894550:five_prime_UTR
GTTGATGGTGTTCGTGCTAT+AGG 0.393529 6_1:-80556895 Msa0894550:five_prime_UTR
CTAGCAGCTGAAGGAAGAAT+TGG 0.394602 6_1:-80550532 Msa0894550:CDS
TGTGATGATTGCATATTTGA+TGG 0.400435 6_1:+80556695 None:intergenic
CTTTCTTTACAATAATTGAT+TGG 0.401667 6_1:+80558001 None:intergenic
TATACAAGTGTTTAGAGGAT+TGG 0.404838 6_1:+80557895 None:intergenic
CACAGTATCTTCCCAATTTG+AGG 0.405085 6_1:-80555462 Msa0894550:intron
ACACCATTGGAGAGTCTTGT+TGG 0.405159 6_1:+80557451 None:intergenic
TTCGAAGAATCCCTCCTCTC+AGG 0.405650 6_1:+80553314 None:intergenic
TATTGGATTGTTAAACACTT+TGG 0.408030 6_1:+80555204 None:intergenic
TTTCTTAGAAGTCCAATAGA+TGG 0.408303 6_1:+80555328 None:intergenic
TCTGAAAGTTTAGCTGTTGA+AGG 0.410361 6_1:-80552947 Msa0894550:five_prime_UTR
GACAATAACAATAATATCAT+TGG 0.411857 6_1:-80554544 Msa0894550:five_prime_UTR
CAAACTTGTATATTTAAACT+TGG 0.412358 6_1:-80554908 Msa0894550:five_prime_UTR
CTTGTTCGAACTTCAGCTAA+AGG 0.414251 6_1:+80553716 None:intergenic
AGGAGGGATTCTTCGAAATC+TGG 0.415946 6_1:-80553308 Msa0894550:five_prime_UTR
CTTGGAGCATTGCATGTTGT+TGG 0.418472 6_1:-80554890 Msa0894550:five_prime_UTR
GTGGAGTTGGATCCATCTAT+TGG 0.418581 6_1:-80555340 Msa0894550:five_prime_UTR
TCATTTCAAAAGATTTGGTT+GGG 0.418707 6_1:-80556966 Msa0894550:five_prime_UTR
TATAATGGGAAAATCTTTGT+TGG 0.419087 6_1:-80553146 Msa0894550:five_prime_UTR
AACAAGATGAGAACAAATAT+TGG 0.419375 6_1:-80554825 Msa0894550:five_prime_UTR
GGATCAACATCAAGGAAAAC+AGG 0.420452 6_1:+80557537 None:intergenic
AAAGATTTGTGAATGCGTTA+AGG 0.420693 6_1:-80557580 Msa0894550:five_prime_UTR
CCCAATACTGTAATTGCTAA+TGG 0.421570 6_1:+80556355 None:intergenic
TTCTCATGCTACATATAAGT+TGG 0.421573 6_1:-80550197 Msa0894550:three_prime_UTR
AACTTAAAGCGTTGATTTCG+TGG 0.423956 6_1:+80557976 None:intergenic
AGCATCAATCTCATTGTTCT+CGG 0.427717 6_1:+80552508 None:intergenic
TGTGGATCAAGTTCAACAAT+TGG 0.428159 6_1:-80556611 Msa0894550:five_prime_UTR
ATTGTCAGGCAAGAAAGGTT+TGG 0.429668 6_1:+80552415 None:intergenic
AGATCCAATGTCCTCAAATT+GGG 0.429785 6_1:+80555451 None:intergenic
CTCTGATTGTTGATCCAACT+TGG 0.430642 6_1:+80554610 None:intergenic
AAGCAAGTGGGGAATATCTC+TGG 0.434713 6_1:-80557408 Msa0894550:five_prime_UTR
TCATTGGGGTGAAAACTTGA+TGG 0.435111 6_1:+80555651 None:intergenic
ACATCCATGACATCATTATC+TGG 0.435323 6_1:+80556268 None:intergenic
CACCATTTATAACACTTCCT+TGG 0.437574 6_1:+80552996 None:intergenic
AAGAGCAAAGAAAGTGGAGC+AGG 0.438922 6_1:-80556000 Msa0894550:five_prime_UTR
CGCCCAATGGTGGTAGCAAA+AGG 0.442263 6_1:+80554850 None:intergenic
CTTGAAAATCTTAATATGAA+TGG 0.444845 6_1:-80555232 Msa0894550:five_prime_UTR
TCTTATCAAAGTAGGATTGT+TGG 0.445940 6_1:+80554662 None:intergenic
AACTAGCTGTGCATCGTGTA+TGG 0.446874 6_1:-80556585 Msa0894550:five_prime_UTR
GGAAGAATCTCATAGAGGTT+AGG 0.450821 6_1:-80550259 Msa0894550:exon
TTTACTAGTGTTACTATATG+TGG 0.455536 6_1:+80558107 None:intergenic
CAAATTCATGATAGCACTCT+CGG 0.456830 6_1:+80554362 None:intergenic
CAACGTCCTCTGTTGTCAAA+TGG 0.456889 6_1:-80555129 Msa0894550:five_prime_UTR
TCCCTCCATCTTGACACCAT+TGG 0.457127 6_1:+80557438 None:intergenic
AATTTGAATCTTATCAAAGT+AGG 0.457750 6_1:+80554654 None:intergenic
AGCATCGGTGTTCTAATTGA+AGG 0.459553 6_1:-80550490 Msa0894550:CDS
GACAACAGAGGACGTTGATC+GGG 0.460244 6_1:+80555135 None:intergenic
TTCATTTCAAAAGATTTGGT+TGG 0.460348 6_1:-80556967 Msa0894550:five_prime_UTR
TTCTGCTGTGGGAATATCTC+AGG 0.460426 6_1:-80555741 Msa0894550:five_prime_UTR
GTAAAATCTATCCAACGGTT+TGG 0.461463 6_1:-80553560 Msa0894550:five_prime_UTR
AATCTGGTCCAAGGAAAGAT+AGG 0.464733 6_1:-80553292 Msa0894550:five_prime_UTR
AGTGTTTAGAGGATTGGATA+TGG 0.465069 6_1:+80557901 None:intergenic
TGTAAACATTCAATTGCATC+AGG 0.467015 6_1:+80554997 None:intergenic
GATGGATTCGGGAATATAAT+GGG 0.470226 6_1:-80553160 Msa0894550:five_prime_UTR
CCTGAGGGAAGCTTGAATAA+AGG 0.470228 6_1:-80552455 Msa0894550:CDS
GATTGACAACACTGATTGTC+AGG 0.470813 6_1:+80552401 None:intergenic
ATAGTTTGTGAGATTCTGTC+CGG 0.471995 6_1:+80556467 None:intergenic
GCTAAGACCAAATATGTTGT+TGG 0.473201 6_1:+80555258 None:intergenic
GTAGAAACTTCATCTGCAAC+AGG 0.475621 6_1:+80553746 None:intergenic
CAAGTTTGGTAAGCTTCCTC+AGG 0.477197 6_1:+80554923 None:intergenic
CTCATCTTGTTCCCGCCCAA+TGG 0.477230 6_1:+80554837 None:intergenic
CTAAGACCAAATATGTTGTT+GGG 0.482986 6_1:+80555259 None:intergenic
GGAGAGTTGCGGGTATCGTT+GGG 0.483264 6_1:-80554296 Msa0894550:five_prime_UTR
TAGAAATCCTTCCTCCCCTT+CGG 0.483516 6_1:+80553204 None:intergenic
GAGATTGATGCTAGTTTGAC+TGG 0.484458 6_1:-80552497 Msa0894550:CDS
TGGAGAGTTGCGGGTATCGT+TGG 0.484573 6_1:-80554297 Msa0894550:five_prime_UTR
CAAGAACCTTCTCCTTCTTG+AGG 0.485334 6_1:+80552703 None:intergenic
TCTTCCCAATTTGAGGACAT+TGG 0.485671 6_1:-80555455 Msa0894550:five_prime_UTR
GCGAGTGTCTTCACCTCTAA+AGG 0.485792 6_1:+80557794 None:intergenic
AACACATATGTGTTTGTCTT+GGG 0.486762 6_1:+80555073 None:intergenic
TAAACTTTCAGAAGTCGCTT+CGG 0.489229 6_1:+80552958 None:intergenic
TTATCCGCTGATAAGAAATC+CGG 0.489725 6_1:-80550559 Msa0894550:CDS
GAAATCAACGGTAATGGTCT+CGG 0.490019 6_1:-80550704 Msa0894550:CDS
TCGCCATCTTCCTCAGCTTA+CGG 0.490050 6_1:+80553181 None:intergenic
AAGATTCAAATTGTTAGTCC+AGG 0.491162 6_1:-80554643 Msa0894550:five_prime_UTR
GATGAAAGTGTAACAGAAAG+TGG 0.492231 6_1:-80552836 Msa0894550:five_prime_UTR
GCAAGTGTTTGCTTGTCCAC+AGG 0.492659 6_1:-80550401 Msa0894550:CDS
GGCTTTCGTAAAACCAGCGT+TGG 0.494577 6_1:+80553667 None:intergenic
AGTGGGGAATATCTCTGGTT+GGG 0.494967 6_1:-80557403 Msa0894550:five_prime_UTR
CCTTTATTCAAGCTTCCCTC+AGG 0.497257 6_1:+80552455 None:intergenic
TGACAACAGAGGACGTTGAT+CGG 0.498371 6_1:+80555134 None:intergenic
CTGAAAGTTTAGCTGTTGAA+GGG 0.499165 6_1:-80552946 Msa0894550:five_prime_UTR
TCTCGATGAAAGTATTGTTA+CGG 0.500645 6_1:-80554419 Msa0894550:five_prime_UTR
CGGCCAAATCAAGTCACCTA+TGG 0.500745 6_1:-80554399 Msa0894550:five_prime_UTR
TTTCCCAGTAAAAGCTGCCC+CGG 0.500991 6_1:+80553583 None:intergenic
CTGCGAGAAGAAACCGGTGC+AGG 0.501344 6_1:-80550664 Msa0894550:CDS
ACTTGTAGAATTGAAGTTGA+CGG 0.501651 6_1:-80555628 Msa0894550:five_prime_UTR
AGCATATATTGAAAGAGTAT+GGG 0.503135 6_1:-80556522 Msa0894550:five_prime_UTR
CGTAAAACCAGCGTTGGGAT+CGG 0.504127 6_1:+80553673 None:intergenic
CAAACAAAGAGCAAAGAAAG+TGG 0.505327 6_1:-80556006 Msa0894550:five_prime_UTR
CCTTGATGTTGATCCTTCTG+AGG 0.507835 6_1:-80557529 Msa0894550:five_prime_UTR
TTGGTCGTAGTGTGGTTGAA+TGG 0.509363 6_1:-80556321 Msa0894550:five_prime_UTR
GGTAATGGTCTCGGCCTCAT+TGG 0.509725 6_1:-80550695 Msa0894550:CDS
ATCTTCAGTACCTCTGCTTG+CGG 0.511083 6_1:+80554077 None:intergenic
CAAATCCTATTTCAAACTCT+CGG 0.513944 6_1:-80556727 Msa0894550:five_prime_UTR
TGTTTCTTTGGCTGATATGG+AGG 0.514335 6_1:+80553796 None:intergenic
AAATTCATGATAGCACTCTC+GGG 0.514389 6_1:+80554363 None:intergenic
GAGTGGTCCGAAGGGGAGGA+AGG 0.515972 6_1:-80553211 Msa0894550:five_prime_UTR
CAAGATTTGCGTTTCACAAG+AGG 0.517861 6_1:-80553100 Msa0894550:five_prime_UTR
GGCCATATAAATCCATAGCA+AGG 0.518220 6_1:+80556839 None:intergenic
CGGCAGAAGTGAGAAATTCA+AGG 0.519937 6_1:-80550446 Msa0894550:CDS
AAGCAACTGCGAGAAGAAAC+CGG 0.521340 6_1:-80550670 Msa0894550:CDS
TGTACATTTATGATAATGAA+TGG 0.521352 6_1:-80554472 Msa0894550:five_prime_UTR
GCTTTCGTAAAACCAGCGTT+GGG 0.522883 6_1:+80553668 None:intergenic
AGGGAAGACAACCCTTGCTA+TGG 0.523012 6_1:-80556851 Msa0894550:five_prime_UTR
TATACATACGCACTTATATG+AGG 0.523497 6_1:-80552920 Msa0894550:five_prime_UTR
CTCACTTCTGCCGACAAAGT+CGG 0.524777 6_1:+80550456 None:intergenic
GTTCGTGCTATAGGAATTTG+GGG 0.528223 6_1:-80556886 Msa0894550:five_prime_UTR
TGGGAGTGGGAAGTGATGAA+TGG 0.529024 6_1:+80555092 None:intergenic
CATTCTTTGTTGAAAGAGCT+AGG 0.530427 6_1:-80556052 Msa0894550:five_prime_UTR
TTTCAAGTAGATGAAGATGT+TGG 0.530580 6_1:-80552539 Msa0894550:intron
TGCTCATCATATTCTGCTGT+GGG 0.530904 6_1:-80555752 Msa0894550:five_prime_UTR
CAATACATTTGAATCAAAAG+AGG 0.530973 6_1:-80555186 Msa0894550:five_prime_UTR
CCAAACAATACAGAGAAATC+CGG 0.531094 6_1:-80553338 Msa0894550:five_prime_UTR
ACTTGTTCTGGTTGCAGTTG+CGG 0.532498 6_1:+80554172 None:intergenic
GCATCAATCTCATTGTTCTC+GGG 0.532732 6_1:+80552509 None:intergenic
CTGTCCAAAATTGGGTGAGA+GGG 0.532907 6_1:-80554737 Msa0894550:five_prime_UTR
AGAATCCCTCCTCTCAGGGC+CGG 0.535622 6_1:+80553319 None:intergenic
GCAACAGAGACAGTTGAGCC+TGG 0.535824 6_1:-80552743 Msa0894550:CDS
TTGCAGGAAATCAACGGTAA+TGG 0.535839 6_1:-80550710 Msa0894550:intron
CTACCGTAAGCTGAGGAAGA+TGG 0.537175 6_1:-80553184 Msa0894550:five_prime_UTR
AGTGGGAAGTGATGAATGGT+GGG 0.537864 6_1:+80555096 None:intergenic
TCGAAGAATCCCTCCTCTCA+GGG 0.539017 6_1:+80553315 None:intergenic
ATCTTGTTCCCGCCCAATGG+TGG 0.539224 6_1:+80554840 None:intergenic
ATCATCCGCAACAGTTGTTG+AGG 0.540849 6_1:+80553027 None:intergenic
GTTTGCTTTCGCACCTCAGA+AGG 0.542302 6_1:+80557516 None:intergenic
GATTCTGTCCGGGTCAAAAG+TGG 0.542586 6_1:+80556478 None:intergenic
AATCTTGCATTTCCGAGCCA+AGG 0.543035 6_1:+80554219 None:intergenic
CCTTCTGATTCTTGATAATG+TGG 0.543639 6_1:-80556629 Msa0894550:five_prime_UTR
CTTGATGGCAAATACTTGAA+AGG 0.545275 6_1:+80555666 None:intergenic
GTTGAGTGATAGCTATGTAA+AGG 0.545322 6_1:-80553486 Msa0894550:five_prime_UTR
ACTCTCCAATGGTGTCAAGA+TGG 0.545390 6_1:-80557443 Msa0894550:five_prime_UTR
CATATATTTGTATAATGTTG+AGG 0.545600 6_1:-80555811 Msa0894550:five_prime_UTR
AAAGAAAGTGGAGCAGGGTG+TGG 0.546404 6_1:-80555994 Msa0894550:five_prime_UTR
GTGATGAGGAGTGGTCCGAA+GGG 0.548531 6_1:-80553219 Msa0894550:five_prime_UTR
CAATGTTGAAACTGACTCAC+TGG 0.549543 6_1:-80552870 Msa0894550:five_prime_UTR
GTTGCAAGTGTGGTGGCTGT+TGG 0.549928 6_1:-80553461 Msa0894550:five_prime_UTR
GATTCAATGATAACAGGGCC+AGG 0.550972 6_1:+80552725 None:intergenic
GAAGGAAGGAGCTAGTTCAT+TGG 0.552591 6_1:-80553056 Msa0894550:five_prime_UTR
AACTGTGAAACCGACTTTGT+CGG 0.552624 6_1:-80550466 Msa0894550:CDS
GAAAGCTCTTTCTGAAACAG+AGG 0.553530 6_1:-80550626 Msa0894550:CDS
CAACACATATGTGTTTGTCT+TGG 0.554422 6_1:+80555072 None:intergenic
ATGAGAACAAATATTGGTGG+CGG 0.554690 6_1:-80554819 Msa0894550:five_prime_UTR
CTAGAAAGATTAAATTTAGG+GGG 0.556718 6_1:-80554970 Msa0894550:five_prime_UTR
AGCGACGTTGATTACAAAGA+AGG 0.557648 6_1:-80553074 Msa0894550:five_prime_UTR
CTTAAGTCCGATCCCAACGC+TGG 0.558449 6_1:-80553680 Msa0894550:five_prime_UTR
TACAGAATATTCAGGCATGA+AGG 0.558724 6_1:-80554320 Msa0894550:five_prime_UTR
GAAATCCGGCCCTGAGAGGA+GGG 0.559070 6_1:-80553324 Msa0894550:five_prime_UTR
AGAAATCCGGCCCTGAGAGG+AGG 0.560282 6_1:-80553325 Msa0894550:five_prime_UTR
CAACAAACGCACCAAACCGT+TGG 0.560336 6_1:+80553549 None:intergenic
TAAACACTTGTATATTCAGA+TGG 0.561380 6_1:-80557886 Msa0894550:five_prime_UTR
TACAATCACGATTCAAGCAT+CGG 0.562819 6_1:-80550505 Msa0894550:CDS
TTGCTCATCATATTCTGCTG+TGG 0.564559 6_1:-80555753 Msa0894550:five_prime_UTR
GAAAATAATCTATGCAAGGA+TGG 0.564768 6_1:+80555049 None:intergenic
AAAATTTATAGATTACATGA+TGG 0.565188 6_1:-80556769 Msa0894550:five_prime_UTR
CTTGAGAAGCTAAATCTGAA+AGG 0.566418 6_1:-80555376 Msa0894550:five_prime_UTR
TGTGATGAGGAGTGGTCCGA+AGG 0.566790 6_1:-80553220 Msa0894550:five_prime_UTR
ATAGCAGAGAAAATTGTTGA+GGG 0.566801 6_1:-80550280 Msa0894550:CDS
TCTTGAAACCATTGTGACGA+AGG 0.567384 6_1:-80550353 Msa0894550:CDS
CTCCAATGGTGTCAAGATGG+AGG 0.568265 6_1:-80557440 Msa0894550:five_prime_UTR
AGAATGAGGATTTGGTTCCC+GGG 0.569157 6_1:-80553601 Msa0894550:five_prime_UTR
CATAGCAGAGAAAATTGTTG+AGG 0.569678 6_1:-80550281 Msa0894550:CDS
GGCATGAAGGTGGAGAGTTG+CGG 0.571127 6_1:-80554307 Msa0894550:five_prime_UTR
GCTGTGCATCGTGTATGGTT+AGG 0.571303 6_1:-80556580 Msa0894550:five_prime_UTR
TGAGAACAAATATTGGTGGC+GGG 0.572691 6_1:-80554818 Msa0894550:five_prime_UTR
CGGTTCCTCAACAACTGTTG+CGG 0.573354 6_1:-80553032 Msa0894550:five_prime_UTR
AACTGACTCACTGGTTGAAG+TGG 0.573670 6_1:-80552861 Msa0894550:five_prime_UTR
GAGTGGGAAGTGATGAATGG+TGG 0.574666 6_1:+80555095 None:intergenic
TATAAATGGTGCCACTGAGA+AGG 0.575300 6_1:-80552984 Msa0894550:five_prime_UTR
TTCTTGCAAGCACCATGTTG+AGG 0.576677 6_1:+80557608 None:intergenic
TATGTGTTTGTCTTGGGAGT+GGG 0.576844 6_1:+80555079 None:intergenic
CAGGCAAGAAAGGTTTGGAA+AGG 0.577815 6_1:+80552420 None:intergenic
GCCATATAAATCCATAGCAA+GGG 0.578499 6_1:+80556840 None:intergenic
AAGTCCAGATAATGATGTCA+TGG 0.578591 6_1:-80556272 Msa0894550:five_prime_UTR
ACAGTCCATTATCCCTGCAC+CGG 0.579376 6_1:+80550651 None:intergenic
ATCATAAACTGATAATGGAA+AGG 0.582675 6_1:-80552780 Msa0894550:exon
GGCTGTTGGACAAGAAGTTA+CGG 0.583153 6_1:-80553447 Msa0894550:five_prime_UTR
GTTGTAGGTTAGGAGTTGCA+TGG 0.583293 6_1:-80553255 Msa0894550:five_prime_UTR
TGAGGAGTGGTCCGAAGGGG+AGG 0.583749 6_1:-80553215 Msa0894550:five_prime_UTR
ATGCAATTGAATGTTTACAT+TGG 0.585040 6_1:-80554993 Msa0894550:five_prime_UTR
AAGTGGGGAATATCTCTGGT+TGG 0.586824 6_1:-80557404 Msa0894550:five_prime_UTR
CCTCAGAAGGATCAACATCA+AGG 0.588053 6_1:+80557529 None:intergenic
ACTGTCCAAAATTGGGTGAG+AGG 0.590994 6_1:-80554738 Msa0894550:five_prime_UTR
CGCTTCGGTTTCCTTCTCAG+TGG 0.591068 6_1:+80552973 None:intergenic
AAGATGAGAACAAATATTGG+TGG 0.591298 6_1:-80554822 Msa0894550:five_prime_UTR
TCCAATGGTGTCAAGATGGA+GGG 0.591588 6_1:-80557439 Msa0894550:five_prime_UTR
AACAGAGGGTGATCTTGTAA+AGG 0.592332 6_1:-80550611 Msa0894550:CDS
CCACATTATCAAGAATCAGA+AGG 0.595484 6_1:+80556629 None:intergenic
AGGTTAGGAGTTGCATGGTA+CGG 0.596006 6_1:-80553250 Msa0894550:five_prime_UTR
CAAAGAAAATAATCTATGCA+AGG 0.599117 6_1:+80555045 None:intergenic
GAATGAGGATTTGGTTCCCG+GGG 0.599120 6_1:-80553600 Msa0894550:five_prime_UTR
CAGGAAGTGAAATACCAAGT+TGG 0.599951 6_1:-80554624 Msa0894550:five_prime_UTR
AGGATCTCAGATTTACGTTG+TGG 0.600753 6_1:-80557652 Msa0894550:five_prime_UTR
GAGGGAAGCTCTAAAGCAAG+TGG 0.601872 6_1:-80557421 Msa0894550:five_prime_UTR
GGAACTATGCTTCCTCAACA+TGG 0.603254 6_1:-80557620 Msa0894550:five_prime_UTR
GCATCGGTGTTCTAATTGAA+GGG 0.603411 6_1:-80550489 Msa0894550:CDS
AAAGCTCTTTCTGAAACAGA+GGG 0.603411 6_1:-80550625 Msa0894550:CDS
TTGAGGGAAGAATCTCATAG+AGG 0.603694 6_1:-80550264 Msa0894550:exon
AAATCCTCATTCTTTACAGG+AGG 0.604341 6_1:+80553611 None:intergenic
AAGTGATGATTTGTCTCCTG+AGG 0.605174 6_1:-80552471 Msa0894550:CDS
TCCGGAAGACTAGCAGCTGA+AGG 0.605549 6_1:-80550541 Msa0894550:CDS
TGTAAAGGACGTTGCAAGTG+TGG 0.605803 6_1:-80553471 Msa0894550:five_prime_UTR
ATTCTTCGAAATCTGGTCCA+AGG 0.607021 6_1:-80553301 Msa0894550:five_prime_UTR
TTGAATCCTCAAGAAGGAGA+AGG 0.607295 6_1:-80552709 Msa0894550:intron
GCTAGAAAGATTAAATTTAG+GGG 0.607842 6_1:-80554971 Msa0894550:five_prime_UTR
GAGATACTGCATTATGCTAG+AGG 0.608434 6_1:-80556382 Msa0894550:five_prime_UTR
TGCGAGAAGAAACCGGTGCA+GGG 0.608538 6_1:-80550663 Msa0894550:CDS
TCGCAGTTGCTTAACCAATG+AGG 0.608617 6_1:+80550681 None:intergenic
TAGTTTGTGAGATTCTGTCC+GGG 0.608647 6_1:+80556468 None:intergenic
ACAGATACAAACTGAACCTG+TGG 0.609443 6_1:+80550385 None:intergenic
GAAGGAGCTAGTTCATTGGT+CGG 0.610923 6_1:-80553052 Msa0894550:five_prime_UTR
GATGCCTCCTGTAAAGAATG+AGG 0.611247 6_1:-80553615 Msa0894550:five_prime_UTR
CACATTATCAAGAATCAGAA+GGG 0.615373 6_1:+80556630 None:intergenic
TTCCCAGTAAAAGCTGCCCC+GGG 0.615600 6_1:+80553584 None:intergenic
ATATGTGTTTGTCTTGGGAG+TGG 0.615821 6_1:+80555078 None:intergenic
TGGATCAACAATCAGAGCAT+CGG 0.615912 6_1:-80554604 Msa0894550:five_prime_UTR
TGAAAGTTTAGCTGTTGAAG+GGG 0.616343 6_1:-80552945 Msa0894550:five_prime_UTR
TGATGAATGGTGGGGCAACA+TGG 0.617347 6_1:+80555105 None:intergenic
CAGTAGATTTGATAAGTCGT+AGG 0.620137 6_1:-80556669 Msa0894550:five_prime_UTR
GAGCTTCTTCGAGCAATCGA+AGG 0.620816 6_1:-80557672 Msa0894550:five_prime_UTR
CAGAGAAATCCGGCCCTGAG+AGG 0.622169 6_1:-80553328 Msa0894550:five_prime_UTR
GGAAAGTAAAATCTATCCAA+CGG 0.624178 6_1:-80553565 Msa0894550:five_prime_UTR
AGAATATTCAGGCATGAAGG+TGG 0.625067 6_1:-80554317 Msa0894550:five_prime_UTR
TTGTGACATTATCTAGCCTG+AGG 0.625311 6_1:-80554939 Msa0894550:five_prime_UTR
AGTTGCGGGTATCGTTGGGT+AGG 0.625399 6_1:-80554292 Msa0894550:five_prime_UTR
TAAGCTGAGGAAGATGGCGA+TGG 0.627679 6_1:-80553178 Msa0894550:five_prime_UTR
TTATCATTGAATCCTCAAGA+AGG 0.628644 6_1:-80552715 Msa0894550:CDS
AGTGATGATTTGTCTCCTGA+GGG 0.629295 6_1:-80552470 Msa0894550:CDS
CATCGTGTATGGTTAGGTGC+AGG 0.630261 6_1:-80556574 Msa0894550:five_prime_UTR
AATTCATGATAGCACTCTCG+GGG 0.633166 6_1:+80554364 None:intergenic
GCGGATGATGAAAGCGACCA+AGG 0.634703 6_1:-80553013 Msa0894550:five_prime_UTR
TTGAGGATTCAATGATAACA+GGG 0.637169 6_1:+80552720 None:intergenic
TCTTCCGGATTTCTTATCAG+CGG 0.637237 6_1:+80550555 None:intergenic
ACGTTGATTACAAAGAAGGA+AGG 0.638116 6_1:-80553070 Msa0894550:five_prime_UTR
AGGGAAGCTCTAAAGCAAGT+GGG 0.639649 6_1:-80557420 Msa0894550:five_prime_UTR
CTGTTGTCAACCGCAAGCAG+AGG 0.641803 6_1:-80554087 Msa0894550:intron
ATTCCAACAAGACTCTCCAA+TGG 0.647060 6_1:-80557454 Msa0894550:five_prime_UTR
GTATATTAATATTATGAACA+AGG 0.647137 6_1:+80557953 None:intergenic
GCATATATTGAAAGAGTATG+GGG 0.648403 6_1:-80556521 Msa0894550:five_prime_UTR
AGAGCAAAGAAAGTGGAGCA+GGG 0.654078 6_1:-80555999 Msa0894550:five_prime_UTR
TCAATTCTACAAGTTCATTG+GGG 0.654382 6_1:+80555637 None:intergenic
TATATTGAAAGAGTATGGGG+TGG 0.655376 6_1:-80556518 Msa0894550:five_prime_UTR
AGGATTTCTACCGTAAGCTG+AGG 0.660330 6_1:-80553191 Msa0894550:five_prime_UTR
AGGTGAATTTGGTACCTCCA+CGG 0.661265 6_1:+80553766 None:intergenic
TGGACAAGAAGTTACGGTGA+AGG 0.662070 6_1:-80553441 Msa0894550:five_prime_UTR
ATCAACAATCAGAGCATCGG+TGG 0.664098 6_1:-80554601 Msa0894550:five_prime_UTR
GGGAAGCTCTAAAGCAAGTG+GGG 0.665829 6_1:-80557419 Msa0894550:five_prime_UTR
GGTTGAATGGAAGAGTGCAT+TGG 0.677619 6_1:-80556308 Msa0894550:five_prime_UTR
CAAAGAAACAGAAGTATCCG+TGG 0.681393 6_1:-80553783 Msa0894550:five_prime_UTR
TGATGAGGAGTGGTCCGAAG+GGG 0.681529 6_1:-80553218 Msa0894550:five_prime_UTR
GTTCTGTTGCAGGAAATCAA+CGG 0.691087 6_1:-80550716 Msa0894550:intron
GTGGGAAGTGATGAATGGTG+GGG 0.695781 6_1:+80555097 None:intergenic
GTGAAGAATGTGATGAGGAG+TGG 0.696151 6_1:-80553228 Msa0894550:five_prime_UTR
TTCGTGCTATAGGAATTTGG+GGG 0.706461 6_1:-80556885 Msa0894550:five_prime_UTR
AAAGGACGTTGCAAGTGTGG+TGG 0.708689 6_1:-80553468 Msa0894550:five_prime_UTR
GTGGTAGCAAAAGGAAGTTG+AGG 0.710047 6_1:+80554859 None:intergenic
CATGGTCCATTTGACAACAG+AGG 0.715233 6_1:+80555123 None:intergenic
GTACGGTGAAGAATGTGATG+AGG 0.733128 6_1:-80553233 Msa0894550:five_prime_UTR
CCAGACGTTCAAAACCTGCG+AGG 0.752155 6_1:-80553646 Msa0894550:five_prime_UTR
AGAAACAGAAGTATCCGTGG+AGG 0.756395 6_1:-80553780 Msa0894550:five_prime_UTR
ATTCATGATAGCACTCTCGG+GGG 0.771405 6_1:+80554365 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTATAGTTTTCAATAAAA+TGG + chr6_1:80552336-80552355 None:intergenic 10.0%
!!! AATATTCTGTAATTTTAAAA+TGG + chr6_1:80553901-80553920 None:intergenic 10.0%
!! GTATATTAATATTATGAACA+AGG + chr6_1:80550280-80550299 None:intergenic 15.0%
!! AATCTATCACTTAAAAAAAA+GGG + chr6_1:80550302-80550321 None:intergenic 15.0%
!!! ATTTTTTGGTAGAAAATATA+GGG - chr6_1:80550906-80550925 Msa0894550:intron 15.0%
!! AAGTTTAAAAAGTTTATCAA+TGG + chr6_1:80551172-80551191 None:intergenic 15.0%
!!! ATTACAAAATCATTTACTTT+TGG - chr6_1:80551307-80551326 Msa0894550:intron 15.0%
!! AAAATTTATAGATTACATGA+TGG - chr6_1:80551461-80551480 Msa0894550:intron 15.0%
!! TATGAGTAATTATGAAAATT+TGG - chr6_1:80551820-80551839 Msa0894550:intron 15.0%
!!! AAAAACATTTTAAATTGTTG+TGG - chr6_1:80552079-80552098 Msa0894550:intron 15.0%
!!! TGATAAGCATTTTATTAAAA+TGG + chr6_1:80553735-80553754 None:intergenic 15.0%
!!! TTTTAATAAAATGCTTATCA+CGG - chr6_1:80553735-80553754 Msa0894550:five_prime_UTR 15.0%
!!! TTTAAAATTACAGAATATTC+AGG - chr6_1:80553902-80553921 Msa0894550:intron 15.0%
!!! ATTTTTTTCCATTATTTTGT+TGG - chr6_1:80554210-80554229 Msa0894550:five_prime_UTR 15.0%
!! AATTATGGAAATGTTATAAT+GGG + chr6_1:80557153-80557172 None:intergenic 15.0%
!! TAATTATGGAAATGTTATAA+TGG + chr6_1:80557154-80557173 None:intergenic 15.0%
!! AACATATATATAAGTATAGA+GGG + chr6_1:80557230-80557249 None:intergenic 15.0%
!! TAACATATATATAAGTATAG+AGG + chr6_1:80557231-80557250 None:intergenic 15.0%
!! TATATTATCTGAATTATTCT+AGG - chr6_1:80557251-80557270 Msa0894550:intron 15.0%
!! AAGAAAAATTGAGAAAAAAA+TGG - chr6_1:80557459-80557478 Msa0894550:five_prime_UTR 15.0%
!!! ATGTTTTTATGAAAGTAAAA+TGG + chr6_1:80558085-80558104 None:intergenic 15.0%
!! CTTTCTTTACAATAATTGAT+TGG + chr6_1:80550232-80550251 None:intergenic 20.0%
!! GAATCTATCACTTAAAAAAA+AGG + chr6_1:80550303-80550322 None:intergenic 20.0%
!!! ATTATAGTTGTCTCATTTTT+TGG - chr6_1:80550892-80550911 Msa0894550:intron 20.0%
!!! CATTTTTTGGTAGAAAATAT+AGG - chr6_1:80550905-80550924 Msa0894550:intron 20.0%
!!! TTTTTTGGTAGAAAATATAG+GGG - chr6_1:80550907-80550926 Msa0894550:intron 20.0%
!!! GATAAACTTTTTAAACTTTC+AGG - chr6_1:80551174-80551193 Msa0894550:intron 20.0%
!! TTCATTCATTTCAAAAGATT+TGG - chr6_1:80551259-80551278 Msa0894550:intron 20.0%
!!! AATGTTTTTAACAATTTTCG+CGG + chr6_1:80552068-80552087 None:intergenic 20.0%
!!! TTTATTTTTTGCAATGCTTT+AGG - chr6_1:80552380-80552399 Msa0894550:intron 20.0%
!! CTCAACATTATACAAATATA+TGG + chr6_1:80552421-80552440 None:intergenic 20.0%
!! CATATATTTGTATAATGTTG+AGG - chr6_1:80552419-80552438 Msa0894550:CDS 20.0%
!!! CAAACGAATTAAGATATTTT+TGG - chr6_1:80552529-80552548 Msa0894550:CDS 20.0%
!!! CTAGAAAAGATAATAGATTT+TGG - chr6_1:80552818-80552837 Msa0894550:five_prime_UTR 20.0%
!! CTTGAAAATCTTAATATGAA+TGG - chr6_1:80552998-80553017 Msa0894550:five_prime_UTR 20.0%
!! CAAGTTTAAATATACAAGTT+TGG + chr6_1:80553324-80553343 None:intergenic 20.0%
!! CAAACTTGTATATTTAAACT+TGG - chr6_1:80553322-80553341 Msa0894550:five_prime_UTR 20.0%
!! AATTTGAATCTTATCAAAGT+AGG + chr6_1:80553579-80553598 None:intergenic 20.0%
!! GACAATAACAATAATATCAT+TGG - chr6_1:80553686-80553705 Msa0894550:five_prime_UTR 20.0%
!!! TGTACATTTATGATAATGAA+TGG - chr6_1:80553758-80553777 Msa0894550:five_prime_UTR 20.0%
!!! AGACTGAATTTTATTATTTG+TGG - chr6_1:80554268-80554287 Msa0894550:five_prime_UTR 20.0%
!!! GACTGAATTTTATTATTTGT+GGG - chr6_1:80554269-80554288 Msa0894550:five_prime_UTR 20.0%
!!! ACTGAATTTTATTATTTGTG+GGG - chr6_1:80554270-80554289 Msa0894550:five_prime_UTR 20.0%
!!! TCATATACAACAACATTTTA+AGG - chr6_1:80554357-80554376 Msa0894550:five_prime_UTR 20.0%
!!! TATTTTACATATGGAAATAC+TGG - chr6_1:80555588-80555607 Msa0894550:intron 20.0%
!! AATGGAAAGGAAATATTATT+TGG + chr6_1:80555673-80555692 None:intergenic 20.0%
!!! AATCTAGTGTTTTTAAATAG+TGG + chr6_1:80555983-80556002 None:intergenic 20.0%
!!! AAAAACACTAGATTGAATTT+TGG - chr6_1:80555989-80556008 Msa0894550:five_prime_UTR 20.0%
!!! CCTTTAACTGTTTTTTATTA+TGG + chr6_1:80556269-80556288 None:intergenic 20.0%
!! CCATAATAAAAAACAGTTAA+AGG - chr6_1:80556266-80556285 Msa0894550:five_prime_UTR 20.0%
!! ATACATATATTCATACTGTT+TGG - chr6_1:80556442-80556461 Msa0894550:five_prime_UTR 20.0%
!!! ATGTAATGTACCTTTTAAAA+TGG + chr6_1:80556856-80556875 None:intergenic 20.0%
!!! AACTATCGTTTTAATTTTGA+CGG + chr6_1:80556937-80556956 None:intergenic 20.0%
!! TTTACTAGTGTTACTATATG+TGG + chr6_1:80550126-80550145 None:intergenic 25.0%
!!! ACAATAATTGATTGGTTTAC+TGG + chr6_1:80550224-80550243 None:intergenic 25.0%
! TAAACACTTGTATATTCAGA+TGG - chr6_1:80550344-80550363 Msa0894550:CDS 25.0%
!!! CATAATGCCTTTTTTTTCAA+GGG + chr6_1:80550490-80550509 None:intergenic 25.0%
!!! TTGGAATCTTTTTTCATGTT+TGG + chr6_1:80550763-80550782 None:intergenic 25.0%
!!! TTTTTGGTAGAAAATATAGG+GGG - chr6_1:80550908-80550927 Msa0894550:intron 25.0%
!!! TTGAATTTTTGCTTTGAACT+CGG + chr6_1:80550946-80550965 None:intergenic 25.0%
!! TTCATTTCAAAAGATTTGGT+TGG - chr6_1:80551263-80551282 Msa0894550:intron 25.0%
!! TCATTTCAAAAGATTTGGTT+GGG - chr6_1:80551264-80551283 Msa0894550:intron 25.0%
!!! AAATCATTTACTTTTGGACT+CGG - chr6_1:80551313-80551332 Msa0894550:intron 25.0%
!! AGCATATATTGAAAGAGTAT+GGG - chr6_1:80551708-80551727 Msa0894550:intron 25.0%
!!! TTTTGATGGTCTAAATCATA+CGG - chr6_1:80551997-80552016 Msa0894550:intron 25.0%
!!! AACATTGTAGAGTTGTTTTT+TGG + chr6_1:80552263-80552282 None:intergenic 25.0%
! CAATGTTATGAATGAGAAAA+TGG - chr6_1:80552276-80552295 Msa0894550:intron 25.0%
! ATTCGTTTGAAAAACTTGAT+GGG + chr6_1:80552518-80552537 None:intergenic 25.0%
! AATTCGTTTGAAAAACTTGA+TGG + chr6_1:80552519-80552538 None:intergenic 25.0%
!!! ACGAATTAAGATATTTTTGG+TGG - chr6_1:80552532-80552551 Msa0894550:CDS 25.0%
!!! CGAATTAAGATATTTTTGGT+GGG - chr6_1:80552533-80552552 Msa0894550:intron 25.0%
! TTCAATTCTACAAGTTCATT+GGG + chr6_1:80552597-80552616 None:intergenic 25.0%
! TTCTCTTATAGTCAAACTAA+TGG - chr6_1:80552720-80552739 Msa0894550:CDS 25.0%
!!! TATTATCTTTTCTAGCTTTG+TGG + chr6_1:80552813-80552832 None:intergenic 25.0%
!! AAAGCTTGTTTACTTGAATT+TGG - chr6_1:80552922-80552941 Msa0894550:five_prime_UTR 25.0%
! TATTGGATTGTTAAACACTT+TGG + chr6_1:80553029-80553048 None:intergenic 25.0%
!!! CTCTTTTGATTCAAATGTAT+TGG + chr6_1:80553046-80553065 None:intergenic 25.0%
! CAATACATTTGAATCAAAAG+AGG - chr6_1:80553044-80553063 Msa0894550:five_prime_UTR 25.0%
! CAAAGAAAATAATCTATGCA+AGG + chr6_1:80553188-80553207 None:intergenic 25.0%
! ATGCAATTGAATGTTTACAT+TGG - chr6_1:80553237-80553256 Msa0894550:five_prime_UTR 25.0%
! TGGCTAGAAAGATTAAATTT+AGG - chr6_1:80553257-80553276 Msa0894550:five_prime_UTR 25.0%
! GGCTAGAAAGATTAAATTTA+GGG - chr6_1:80553258-80553277 Msa0894550:five_prime_UTR 25.0%
! GCTAGAAAGATTAAATTTAG+GGG - chr6_1:80553259-80553278 Msa0894550:five_prime_UTR 25.0%
! CTAGAAAGATTAAATTTAGG+GGG - chr6_1:80553260-80553279 Msa0894550:five_prime_UTR 25.0%
! AACAAGATGAGAACAAATAT+TGG - chr6_1:80553405-80553424 Msa0894550:five_prime_UTR 25.0%
!! ATTTTCAACTGTCCAAAATT+GGG - chr6_1:80553485-80553504 Msa0894550:five_prime_UTR 25.0%
!! TTGTTATTGTCATGCATAAT+TGG + chr6_1:80553677-80553696 None:intergenic 25.0%
!! AATTTTATTATTTGTGGGGT+GGG - chr6_1:80554274-80554293 Msa0894550:five_prime_UTR 25.0%
!!! GAAATCACAAAATTTGTTGT+AGG - chr6_1:80554960-80554979 Msa0894550:five_prime_UTR 25.0%
!! TATAATGGGAAAATCTTTGT+TGG - chr6_1:80555084-80555103 Msa0894550:five_prime_UTR 25.0%
! CAACAATCATAAACTGATAA+TGG - chr6_1:80555445-80555464 Msa0894550:five_prime_UTR 25.0%
!!! ATCATAAACTGATAATGGAA+AGG - chr6_1:80555450-80555469 Msa0894550:five_prime_UTR 25.0%
! TACATAAAGATCAAATAGAC+AGG + chr6_1:80556052-80556071 None:intergenic 25.0%
!! TTGCATAAAGTTGATTGATT+GGG + chr6_1:80556123-80556142 None:intergenic 25.0%
!! TTTGCATAAAGTTGATTGAT+TGG + chr6_1:80556124-80556143 None:intergenic 25.0%
! TAAAAAACAGTTAAAGGTGA+AGG - chr6_1:80556272-80556291 Msa0894550:five_prime_UTR 25.0%
! TTGTTCATCAGAATTAGTAA+AGG + chr6_1:80556298-80556317 None:intergenic 25.0%
! TCAAATAAGTCAATCCAAAA+GGG + chr6_1:80556469-80556488 None:intergenic 25.0%
! TTCAAATAAGTCAATCCAAA+AGG + chr6_1:80556470-80556489 None:intergenic 25.0%
! TTATGCAAATAAGCTGAAAA+CGG + chr6_1:80556569-80556588 None:intergenic 25.0%
!!! GAAACTTTGAATTAAGTTGA+AGG + chr6_1:80556713-80556732 None:intergenic 25.0%
!!! GGTTGTTTTGTTTAAAATGT+AGG - chr6_1:80556787-80556806 Msa0894550:five_prime_UTR 25.0%
! ATTACATCTTCATTTCATCA+AGG - chr6_1:80556869-80556888 Msa0894550:five_prime_UTR 25.0%
! TACACAATCAATTAATGATC+AGG + chr6_1:80556990-80557009 None:intergenic 25.0%
! TATATATAAGTATAGAGGGA+AGG + chr6_1:80557226-80557245 None:intergenic 25.0%
! ATCACGCGTTGAAATTTTTA+AGG + chr6_1:80550198-80550217 None:intergenic 30.0%
TATACAAGTGTTTAGAGGAT+TGG + chr6_1:80550338-80550357 None:intergenic 30.0%
CTGAATATACAAGTGTTTAG+AGG + chr6_1:80550343-80550362 None:intergenic 30.0%
TTTGATGCCCTTGAAAAAAA+AGG - chr6_1:80550480-80550499 Msa0894550:CDS 30.0%
!!! CCATAATGCCTTTTTTTTCA+AGG + chr6_1:80550491-80550510 None:intergenic 30.0%
!! CCTTGAAAAAAAAGGCATTA+TGG - chr6_1:80550488-80550507 Msa0894550:CDS 30.0%
GATGACACTAATCTTCAAAA+AGG - chr6_1:80550519-80550538 Msa0894550:CDS 30.0%
CTTCAAAAAGGTGAATCTAT+AGG - chr6_1:80550531-80550550 Msa0894550:CDS 30.0%
AAAGATTTGTGAATGCGTTA+AGG - chr6_1:80550650-80550669 Msa0894550:CDS 30.0%
!!! TCTTTTTTCATGTTTGGCAA+AGG + chr6_1:80550757-80550776 None:intergenic 30.0%
CGCGATAAGTAAGTAAATTA+TGG - chr6_1:80550855-80550874 Msa0894550:intron 30.0%
!! TGAATTTTTGCTTTGAACTC+GGG + chr6_1:80550945-80550964 None:intergenic 30.0%
TAAACTATAGTTTGAACTCC+AGG + chr6_1:80551078-80551097 None:intergenic 30.0%
CAAATCCTATTTCAAACTCT+CGG - chr6_1:80551503-80551522 Msa0894550:intron 30.0%
TGTGATGATTGCATATTTGA+TGG + chr6_1:80551538-80551557 None:intergenic 30.0%
CACATTATCAAGAATCAGAA+GGG + chr6_1:80551603-80551622 None:intergenic 30.0%
GAGCATATATTGAAAGAGTA+TGG - chr6_1:80551707-80551726 Msa0894550:intron 30.0%
! GCATATATTGAAAGAGTATG+GGG - chr6_1:80551709-80551728 Msa0894550:intron 30.0%
ACCATTAGCAATTACAGTAT+TGG - chr6_1:80551874-80551893 Msa0894550:intron 30.0%
CCATTAGCAATTACAGTATT+GGG - chr6_1:80551875-80551894 Msa0894550:intron 30.0%
!!! CACATTGCTTGTTTTTTCAA+CGG - chr6_1:80552037-80552056 Msa0894550:intron 30.0%
TCACTCATAAGCATAGAAAA+TGG - chr6_1:80552142-80552161 Msa0894550:intron 30.0%
!!! ATTAAGATATTTTTGGTGGG+AGG - chr6_1:80552536-80552555 Msa0894550:intron 30.0%
TCAATTCTACAAGTTCATTG+GGG + chr6_1:80552596-80552615 None:intergenic 30.0%
CTTCAATTCTACAAGTTCAT+TGG + chr6_1:80552598-80552617 None:intergenic 30.0%
ACTTGTAGAATTGAAGTTGA+CGG - chr6_1:80552602-80552621 Msa0894550:intron 30.0%
AGAGCAAGATTAAACAACTA+TGG - chr6_1:80552625-80552644 Msa0894550:intron 30.0%
ACAACTATGGAAAAACAAGA+AGG - chr6_1:80552638-80552657 Msa0894550:intron 30.0%
!!! ACTAATGGCTCTATTTTTGT+TGG - chr6_1:80552735-80552754 Msa0894550:CDS 30.0%
! GATTTAGCTTCTCAAGATTT+GGG + chr6_1:80552850-80552869 None:intergenic 30.0%
! AGATTTAGCTTCTCAAGATT+TGG + chr6_1:80552851-80552870 None:intergenic 30.0%
GAAAGGATGTAAAAAACTAG+TGG - chr6_1:80552871-80552890 Msa0894550:five_prime_UTR 30.0%
ATGTAAAAAACTAGTGGAGT+TGG - chr6_1:80552877-80552896 Msa0894550:five_prime_UTR 30.0%
TTTCTTAGAAGTCCAATAGA+TGG + chr6_1:80552905-80552924 None:intergenic 30.0%
AACATACCCAACAACATATT+TGG - chr6_1:80552965-80552984 Msa0894550:five_prime_UTR 30.0%
CTAAGACCAAATATGTTGTT+GGG + chr6_1:80552974-80552993 None:intergenic 30.0%
AACACATATGTGTTTGTCTT+GGG + chr6_1:80553160-80553179 None:intergenic 30.0%
GAAAATAATCTATGCAAGGA+TGG + chr6_1:80553184-80553203 None:intergenic 30.0%
TGTAAACATTCAATTGCATC+AGG + chr6_1:80553236-80553255 None:intergenic 30.0%
AAGATGAGAACAAATATTGG+TGG - chr6_1:80553408-80553427 Msa0894550:five_prime_UTR 30.0%
TGAAGCTGAAAAAATATGAG+TGG - chr6_1:80553447-80553466 Msa0894550:five_prime_UTR 30.0%
GAAGCTGAAAAAATATGAGT+GGG - chr6_1:80553448-80553467 Msa0894550:five_prime_UTR 30.0%
!! AAAAAATATGAGTGGGTTAC+AGG - chr6_1:80553455-80553474 Msa0894550:five_prime_UTR 30.0%
! CATTTTCAACTGTCCAAAAT+TGG - chr6_1:80553484-80553503 Msa0894550:five_prime_UTR 30.0%
ATGGATGATGCAATTCATTA+AGG - chr6_1:80553541-80553560 Msa0894550:five_prime_UTR 30.0%
TCTTATCAAAGTAGGATTGT+TGG + chr6_1:80553571-80553590 None:intergenic 30.0%
AAGATTCAAATTGTTAGTCC+AGG - chr6_1:80553587-80553606 Msa0894550:five_prime_UTR 30.0%
!! TCTCGATGAAAGTATTGTTA+CGG - chr6_1:80553811-80553830 Msa0894550:five_prime_UTR 30.0%
! GAATTTTATTATTTGTGGGG+TGG - chr6_1:80554273-80554292 Msa0894550:five_prime_UTR 30.0%
! ATTTTATTATTTGTGGGGTG+GGG - chr6_1:80554275-80554294 Msa0894550:five_prime_UTR 30.0%
GGAAAGTAAAATCTATCCAA+CGG - chr6_1:80554665-80554684 Msa0894550:five_prime_UTR 30.0%
!! CACAAAATTTGTTGTAGGTT+AGG - chr6_1:80554965-80554984 Msa0894550:five_prime_UTR 30.0%
TATACATACGCACTTATATG+AGG - chr6_1:80555310-80555329 Msa0894550:five_prime_UTR 30.0%
TTGAGGATTCAATGATAACA+GGG + chr6_1:80555513-80555532 None:intergenic 30.0%
TTATCATTGAATCCTCAAGA+AGG - chr6_1:80555515-80555534 Msa0894550:intron 30.0%
CCATATGTAAAATACGAATG+CGG + chr6_1:80555582-80555601 None:intergenic 30.0%
TTCATCTACTTGAAATGGAA+AGG + chr6_1:80555686-80555705 None:intergenic 30.0%
ACATCTTCATCTACTTGAAA+TGG + chr6_1:80555691-80555710 None:intergenic 30.0%
! TTTCAAGTAGATGAAGATGT+TGG - chr6_1:80555691-80555710 Msa0894550:five_prime_UTR 30.0%
GTACAATATCATGCATTATG+TGG + chr6_1:80556079-80556098 None:intergenic 30.0%
TTGATTGATTGGGATCATAT+AGG + chr6_1:80556113-80556132 None:intergenic 30.0%
ACTAATTCTGATGAACAAAC+TGG - chr6_1:80556300-80556319 Msa0894550:five_prime_UTR 30.0%
TCTGTGTATCACATTTACTT+CGG + chr6_1:80556413-80556432 None:intergenic 30.0%
CAAATAAGTCAATCCAAAAG+GGG + chr6_1:80556468-80556487 None:intergenic 30.0%
AGACTGTTTGGAAGAATTTA+TGG - chr6_1:80556516-80556535 Msa0894550:five_prime_UTR 30.0%
TACACATACACACTTATATG+AGG - chr6_1:80556674-80556693 Msa0894550:five_prime_UTR 30.0%
CTTAATTCAAAGTTTCAAGC+AGG - chr6_1:80556717-80556736 Msa0894550:five_prime_UTR 30.0%
ATTTGACACAAACAAGATCA+AGG + chr6_1:80556744-80556763 None:intergenic 30.0%
GTCATTTCTTCATGTCAATT+TGG - chr6_1:80556766-80556785 Msa0894550:five_prime_UTR 30.0%
GTTACATCTAAGTTACATCA+TGG - chr6_1:80556891-80556910 Msa0894550:five_prime_UTR 30.0%
ATCAATTAATGATCAGGACA+AGG + chr6_1:80556984-80557003 None:intergenic 30.0%
CTAAAAACTGTAACAGAAGT+CGG - chr6_1:80557010-80557029 Msa0894550:five_prime_UTR 30.0%
GATAAAGCATGGCATAATTA+TGG + chr6_1:80557168-80557187 None:intergenic 30.0%
TAATTATGCCATGCTTTATC+AGG - chr6_1:80557168-80557187 Msa0894550:intron 30.0%
AATTATGCCATGCTTTATCA+GGG - chr6_1:80557169-80557188 Msa0894550:intron 30.0%
! AATTTTCTCTGCTATGTTCT+CGG + chr6_1:80557945-80557964 None:intergenic 30.0%
ATAGCAGAGAAAATTGTTGA+GGG - chr6_1:80557950-80557969 Msa0894550:five_prime_UTR 30.0%
TTCTCATGCTACATATAAGT+TGG - chr6_1:80558033-80558052 Msa0894550:five_prime_UTR 30.0%
!! AACTTAAAGCGTTGATTTCG+TGG + chr6_1:80550257-80550276 None:intergenic 35.0%
AGTGTTTAGAGGATTGGATA+TGG + chr6_1:80550332-80550351 None:intergenic 35.0%
! TTTACGTTGTGGTCTTTTCA+AGG - chr6_1:80550589-80550608 Msa0894550:CDS 35.0%
ATAACATGCCTTCGAATATG+AGG + chr6_1:80551032-80551051 None:intergenic 35.0%
!! TAATCTCTAGAACAAACACC+TGG - chr6_1:80551057-80551076 Msa0894550:intron 35.0%
!! TTTTCAAGCTCTACAGATTG+CGG + chr6_1:80551200-80551219 None:intergenic 35.0%
TGTTCGTGCTATAGGAATTT+GGG - chr6_1:80551343-80551362 Msa0894550:intron 35.0%
! ACCCTTGCTATGGATTTATA+TGG - chr6_1:80551389-80551408 Msa0894550:intron 35.0%
GCCATATAAATCCATAGCAA+GGG + chr6_1:80551393-80551412 None:intergenic 35.0%
CATCAAATCGATGAGAGATT+TGG + chr6_1:80551415-80551434 None:intergenic 35.0%
GCTTACATCATCAATGAAAC+AGG + chr6_1:80551441-80551460 None:intergenic 35.0%
CAGTAGATTTGATAAGTCGT+AGG - chr6_1:80551561-80551580 Msa0894550:intron 35.0%
CCACATTATCAAGAATCAGA+AGG + chr6_1:80551604-80551623 None:intergenic 35.0%
!! CCTTCTGATTCTTGATAATG+TGG - chr6_1:80551601-80551620 Msa0894550:intron 35.0%
TGTGGATCAAGTTCAACAAT+TGG - chr6_1:80551619-80551638 Msa0894550:intron 35.0%
! TATATTGAAAGAGTATGGGG+TGG - chr6_1:80551712-80551731 Msa0894550:intron 35.0%
! ATAGTTTGTGAGATTCTGTC+CGG + chr6_1:80551766-80551785 None:intergenic 35.0%
CCCAATACTGTAATTGCTAA+TGG + chr6_1:80551878-80551897 None:intergenic 35.0%
!! GTATTGGGCTCATTTTTGTT+TGG - chr6_1:80551890-80551909 Msa0894550:intron 35.0%
!! ATTTTTGTTTGGTCGTAGTG+TGG - chr6_1:80551901-80551920 Msa0894550:intron 35.0%
AAGTCCAGATAATGATGTCA+TGG - chr6_1:80551958-80551977 Msa0894550:intron 35.0%
ACATCCATGACATCATTATC+TGG + chr6_1:80551965-80551984 None:intergenic 35.0%
!!! TTGCTTGTTTTTTCAACGGT+TGG - chr6_1:80552041-80552060 Msa0894550:intron 35.0%
TGTGGATTTCATGCTGATAT+TGG - chr6_1:80552097-80552116 Msa0894550:intron 35.0%
CATTCTTTGTTGAAAGAGCT+AGG - chr6_1:80552178-80552197 Msa0894550:intron 35.0%
CAAACAAAGAGCAAAGAAAG+TGG - chr6_1:80552224-80552243 Msa0894550:intron 35.0%
! CTTGATGGCAAATACTTGAA+AGG + chr6_1:80552567-80552586 None:intergenic 35.0%
AGATCCAATGTCCTCAAATT+GGG + chr6_1:80552782-80552801 None:intergenic 35.0%
TAGATCCAATGTCCTCAAAT+TGG + chr6_1:80552783-80552802 None:intergenic 35.0%
CTTGAGAAGCTAAATCTGAA+AGG - chr6_1:80552854-80552873 Msa0894550:five_prime_UTR 35.0%
GCTAAGACCAAATATGTTGT+TGG + chr6_1:80552975-80552994 None:intergenic 35.0%
CAACACATATGTGTTTGTCT+TGG + chr6_1:80553161-80553180 None:intergenic 35.0%
ATGAGAACAAATATTGGTGG+CGG - chr6_1:80553411-80553430 Msa0894550:five_prime_UTR 35.0%
ATACTTTCATCGAGAATTGC+TGG + chr6_1:80553806-80553825 None:intergenic 35.0%
TATCCATAGGTGACTTGATT+TGG + chr6_1:80553837-80553856 None:intergenic 35.0%
AAATTCATGATAGCACTCTC+GGG + chr6_1:80553870-80553889 None:intergenic 35.0%
CAAATTCATGATAGCACTCT+CGG + chr6_1:80553871-80553890 None:intergenic 35.0%
TACAGAATATTCAGGCATGA+AGG - chr6_1:80553910-80553929 Msa0894550:intron 35.0%
! TTGCTAAGTTGAACTCTTGT+AGG + chr6_1:80553973-80553992 None:intergenic 35.0%
GATGAATCACGAAAAATCCT+TGG - chr6_1:80553994-80554013 Msa0894550:intron 35.0%
!! GAAGTAGTTATGACTTGTTC+TGG + chr6_1:80554073-80554092 None:intergenic 35.0%
CACTTCTGCCAACAAAATAA+TGG + chr6_1:80554221-80554240 None:intergenic 35.0%
! TTTTATTATTTGTGGGGTGG+GGG - chr6_1:80554276-80554295 Msa0894550:five_prime_UTR 35.0%
!!! GGGGGTTTTAAATTTGTGTT+AGG - chr6_1:80554294-80554313 Msa0894550:five_prime_UTR 35.0%
!!! AGGTTCGAGATTTTTTTCTG+TGG + chr6_1:80554417-80554436 None:intergenic 35.0%
! TTCTGTTTCTTTGGCTGATA+TGG + chr6_1:80554440-80554459 None:intergenic 35.0%
AAATCCTCATTCTTTACAGG+AGG + chr6_1:80554622-80554641 None:intergenic 35.0%
TCCTGTAAAGAATGAGGATT+TGG - chr6_1:80554621-80554640 Msa0894550:five_prime_UTR 35.0%
ACCAAATCCTCATTCTTTAC+AGG + chr6_1:80554625-80554644 None:intergenic 35.0%
GTAAAATCTATCCAACGGTT+TGG - chr6_1:80554670-80554689 Msa0894550:five_prime_UTR 35.0%
!!! TTTGGTGCGTTTGTTGATTT+TGG - chr6_1:80554688-80554707 Msa0894550:five_prime_UTR 35.0%
!!! TGTTGATTTTGGAGCTTTCA+CGG - chr6_1:80554699-80554718 Msa0894550:five_prime_UTR 35.0%
GTTGAGTGATAGCTATGTAA+AGG - chr6_1:80554744-80554763 Msa0894550:five_prime_UTR 35.0%
CCAAACAATACAGAGAAATC+CGG - chr6_1:80554892-80554911 Msa0894550:five_prime_UTR 35.0%
TGTGATTTCCTATCTTTCCT+TGG + chr6_1:80554949-80554968 None:intergenic 35.0%
! GATGGATTCGGGAATATAAT+GGG - chr6_1:80555070-80555089 Msa0894550:five_prime_UTR 35.0%
GGAAAATCTTTGTTGGAGAT+TGG - chr6_1:80555091-80555110 Msa0894550:five_prime_UTR 35.0%
! ACGTTGATTACAAAGAAGGA+AGG - chr6_1:80555160-80555179 Msa0894550:five_prime_UTR 35.0%
!! GACCAAGGAAGTGTTATAAA+TGG - chr6_1:80555232-80555251 Msa0894550:five_prime_UTR 35.0%
CACCATTTATAACACTTCCT+TGG + chr6_1:80555237-80555256 None:intergenic 35.0%
TAAACTTTCAGAAGTCGCTT+CGG + chr6_1:80555275-80555294 None:intergenic 35.0%
TCTGAAAGTTTAGCTGTTGA+AGG - chr6_1:80555283-80555302 Msa0894550:five_prime_UTR 35.0%
CTGAAAGTTTAGCTGTTGAA+GGG - chr6_1:80555284-80555303 Msa0894550:five_prime_UTR 35.0%
TGAAAGTTTAGCTGTTGAAG+GGG - chr6_1:80555285-80555304 Msa0894550:five_prime_UTR 35.0%
! GATGAAAGTGTAACAGAAAG+TGG - chr6_1:80555394-80555413 Msa0894550:five_prime_UTR 35.0%
CTTGAGGATTCAATGATAAC+AGG + chr6_1:80555514-80555533 None:intergenic 35.0%
! CCGCATTCGTATTTTACATA+TGG - chr6_1:80555579-80555598 Msa0894550:intron 35.0%
AGCATCAATCTCATTGTTCT+CGG + chr6_1:80555725-80555744 None:intergenic 35.0%
TTCATATAGCAGCTATAGTG+GGG + chr6_1:80555910-80555929 None:intergenic 35.0%
GTTCATATAGCAGCTATAGT+GGG + chr6_1:80555911-80555930 None:intergenic 35.0%
TGTTCATATAGCAGCTATAG+TGG + chr6_1:80555912-80555931 None:intergenic 35.0%
GATCATATAGGCAATGAAAG+GGG + chr6_1:80556101-80556120 None:intergenic 35.0%
GGATCATATAGGCAATGAAA+GGG + chr6_1:80556102-80556121 None:intergenic 35.0%
CTTTATGCAAACCAAAGCAA+TGG - chr6_1:80556133-80556152 Msa0894550:five_prime_UTR 35.0%
ATGATGTCATTCCATTGCTT+TGG + chr6_1:80556147-80556166 None:intergenic 35.0%
! ATGAAATCGCAACCTTTTCT+CGG + chr6_1:80556348-80556367 None:intergenic 35.0%
TAAGAACTTGTGAGACTGTT+TGG - chr6_1:80556504-80556523 Msa0894550:five_prime_UTR 35.0%
! TAAGCTGAAAACGGCTTTTA+TGG + chr6_1:80556560-80556579 None:intergenic 35.0%
! AAAATGGTCAGCAAGACTTT+TGG + chr6_1:80556840-80556859 None:intergenic 35.0%
! GTCTTGCTGACCATTTTAAA+AGG - chr6_1:80556843-80556862 Msa0894550:five_prime_UTR 35.0%
AAGTCGGCTAAGAATAAAGT+TGG - chr6_1:80557026-80557045 Msa0894550:five_prime_UTR 35.0%
ATAAGTATAGAGGGAAGGTT+CGG + chr6_1:80557221-80557240 None:intergenic 35.0%
!! TGAAAGCACCAACACAAAAA+CGG - chr6_1:80557330-80557349 Msa0894550:intron 35.0%
!! TCAAATGTCCGTTTTTGTGT+TGG + chr6_1:80557341-80557360 None:intergenic 35.0%
ATTGTTCAATGTTCTGTTGC+AGG - chr6_1:80557504-80557523 Msa0894550:five_prime_UTR 35.0%
!! AAAGCTCTTTCTGAAACAGA+GGG - chr6_1:80557605-80557624 Msa0894550:five_prime_UTR 35.0%
CAAGCATACCTCAGAAAAAA+GGG - chr6_1:80557644-80557663 Msa0894550:five_prime_UTR 35.0%
!!! ATAAGAGACCCTTTTTTCTG+AGG + chr6_1:80557655-80557674 None:intergenic 35.0%
TTATCCGCTGATAAGAAATC+CGG - chr6_1:80557671-80557690 Msa0894550:five_prime_UTR 35.0%
TACAATCACGATTCAAGCAT+CGG - chr6_1:80557725-80557744 Msa0894550:five_prime_UTR 35.0%
! TTCTTTTTCCTTCGTCACAA+TGG + chr6_1:80557888-80557907 None:intergenic 35.0%
! ATTTTCTCTGCTATGTTCTC+GGG + chr6_1:80557944-80557963 None:intergenic 35.0%
CATAGCAGAGAAAATTGTTG+AGG - chr6_1:80557949-80557968 Msa0894550:five_prime_UTR 35.0%
GATGTGTTTGTCACCTTTAG+AGG - chr6_1:80550423-80550442 Msa0894550:CDS 40.0%
AGGATCTCAGATTTACGTTG+TGG - chr6_1:80550578-80550597 Msa0894550:CDS 40.0%
GGATCAACATCAAGGAAAAC+AGG + chr6_1:80550696-80550715 None:intergenic 40.0%
ATTCCAACAAGACTCTCCAA+TGG - chr6_1:80550776-80550795 Msa0894550:intron 40.0%
GTAGAAAATATAGGGGGTGA+GGG - chr6_1:80550914-80550933 Msa0894550:intron 40.0%
TAGAAAATATAGGGGGTGAG+GGG - chr6_1:80550915-80550934 Msa0894550:intron 40.0%
ACCCAAAACCTCATATTCGA+AGG - chr6_1:80551021-80551040 Msa0894550:intron 40.0%
! GCCTTCGAATATGAGGTTTT+GGG + chr6_1:80551025-80551044 None:intergenic 40.0%
! TGCCTTCGAATATGAGGTTT+TGG + chr6_1:80551026-80551045 None:intergenic 40.0%
!! TTACTTTTGGACTCGGTTGA+TGG - chr6_1:80551320-80551339 Msa0894550:intron 40.0%
GTGTTCGTGCTATAGGAATT+TGG - chr6_1:80551342-80551361 Msa0894550:intron 40.0%
GTTCGTGCTATAGGAATTTG+GGG - chr6_1:80551344-80551363 Msa0894550:intron 40.0%
TTCGTGCTATAGGAATTTGG+GGG - chr6_1:80551345-80551364 Msa0894550:intron 40.0%
GGCCATATAAATCCATAGCA+AGG + chr6_1:80551394-80551413 None:intergenic 40.0%
!! ATTTGCTTTTGTGCATCGAG+TGG + chr6_1:80551488-80551507 None:intergenic 40.0%
! CTATGCCGAGAGTTTGAAAT+AGG + chr6_1:80551511-80551530 None:intergenic 40.0%
TCGTAGGCTACGTTGTAAAA+AGG - chr6_1:80551577-80551596 Msa0894550:intron 40.0%
!! ACAAAGTTCCACTTTTGACC+CGG - chr6_1:80551744-80551763 Msa0894550:intron 40.0%
! TAGTTTGTGAGATTCTGTCC+GGG + chr6_1:80551765-80551784 None:intergenic 40.0%
GAGATACTGCATTATGCTAG+AGG - chr6_1:80551848-80551867 Msa0894550:intron 40.0%
!! GTGCTGCAGTTAAGTTTTGA+TGG - chr6_1:80551983-80552002 Msa0894550:intron 40.0%
TTGCTCATCATATTCTGCTG+TGG - chr6_1:80552477-80552496 Msa0894550:CDS 40.0%
TGCTCATCATATTCTGCTGT+GGG - chr6_1:80552478-80552497 Msa0894550:CDS 40.0%
TCATTGGGGTGAAAACTTGA+TGG + chr6_1:80552582-80552601 None:intergenic 40.0%
CACAGTATCTTCCCAATTTG+AGG - chr6_1:80552768-80552787 Msa0894550:CDS 40.0%
TCTTCCCAATTTGAGGACAT+TGG - chr6_1:80552775-80552794 Msa0894550:exon 40.0%
TATGTGTTTGTCTTGGGAGT+GGG + chr6_1:80553154-80553173 None:intergenic 40.0%
ATATGTGTTTGTCTTGGGAG+TGG + chr6_1:80553155-80553174 None:intergenic 40.0%
TTGTGACATTATCTAGCCTG+AGG - chr6_1:80553291-80553310 Msa0894550:five_prime_UTR 40.0%
! TTCCTTTTGCTACCACCATT+GGG - chr6_1:80553378-80553397 Msa0894550:five_prime_UTR 40.0%
! TGAGAACAAATATTGGTGGC+GGG - chr6_1:80553412-80553431 Msa0894550:five_prime_UTR 40.0%
! GCAGTAGCATGACATTTTCA+TGG - chr6_1:80553522-80553541 Msa0894550:five_prime_UTR 40.0%
CAACTTGGTATTTCACTTCC+TGG + chr6_1:80553608-80553627 None:intergenic 40.0%
CAGGAAGTGAAATACCAAGT+TGG - chr6_1:80553606-80553625 Msa0894550:five_prime_UTR 40.0%
CTCTGATTGTTGATCCAACT+TGG + chr6_1:80553623-80553642 None:intergenic 40.0%
TGGATCAACAATCAGAGCAT+CGG - chr6_1:80553626-80553645 Msa0894550:five_prime_UTR 40.0%
AATTCATGATAGCACTCTCG+GGG + chr6_1:80553869-80553888 None:intergenic 40.0%
!! CGAGAGTGCTATCATGAATT+TGG - chr6_1:80553869-80553888 Msa0894550:intron 40.0%
AGAATATTCAGGCATGAAGG+TGG - chr6_1:80553913-80553932 Msa0894550:intron 40.0%
ATCACGAAAAATCCTTGGCT+CGG - chr6_1:80553999-80554018 Msa0894550:intron 40.0%
TGAAACACAGACACAAACAG+CGG + chr6_1:80554340-80554359 None:intergenic 40.0%
TTCTGTGGATGACATGAATG+CGG + chr6_1:80554402-80554421 None:intergenic 40.0%
TGTTTCTTTGGCTGATATGG+AGG + chr6_1:80554437-80554456 None:intergenic 40.0%
! CACGGATACTTCTGTTTCTT+TGG + chr6_1:80554449-80554468 None:intergenic 40.0%
!! CAAAGAAACAGAAGTATCCG+TGG - chr6_1:80554447-80554466 Msa0894550:five_prime_UTR 40.0%
TCATCTGCAACAGGTGAATT+TGG + chr6_1:80554478-80554497 None:intergenic 40.0%
GTAGAAACTTCATCTGCAAC+AGG + chr6_1:80554487-80554506 None:intergenic 40.0%
CTTGTTCGAACTTCAGCTAA+AGG + chr6_1:80554517-80554536 None:intergenic 40.0%
! AAGAATGAGGATTTGGTTCC+CGG - chr6_1:80554628-80554647 Msa0894550:five_prime_UTR 40.0%
CCGGATTTCTCTGTATTGTT+TGG + chr6_1:80554895-80554914 None:intergenic 40.0%
ATTCTTCGAAATCTGGTCCA+AGG - chr6_1:80554929-80554948 Msa0894550:five_prime_UTR 40.0%
AATCTGGTCCAAGGAAAGAT+AGG - chr6_1:80554938-80554957 Msa0894550:five_prime_UTR 40.0%
! CGATGGATTCGGGAATATAA+TGG - chr6_1:80555069-80555088 Msa0894550:five_prime_UTR 40.0%
CAAGATTTGCGTTTCACAAG+AGG - chr6_1:80555130-80555149 Msa0894550:five_prime_UTR 40.0%
! AGCGACGTTGATTACAAAGA+AGG - chr6_1:80555156-80555175 Msa0894550:five_prime_UTR 40.0%
!! TATAAATGGTGCCACTGAGA+AGG - chr6_1:80555246-80555265 Msa0894550:five_prime_UTR 40.0%
! CAATGTTGAAACTGACTCAC+TGG - chr6_1:80555360-80555379 Msa0894550:five_prime_UTR 40.0%
TTGAATCCTCAAGAAGGAGA+AGG - chr6_1:80555521-80555540 Msa0894550:intron 40.0%
GCATCAATCTCATTGTTCTC+GGG + chr6_1:80555724-80555743 None:intergenic 40.0%
! GAGATTGATGCTAGTTTGAC+TGG - chr6_1:80555733-80555752 Msa0894550:five_prime_UTR 40.0%
! AAGTGATGATTTGTCTCCTG+AGG - chr6_1:80555759-80555778 Msa0894550:five_prime_UTR 40.0%
! AGTGATGATTTGTCTCCTGA+GGG - chr6_1:80555760-80555779 Msa0894550:five_prime_UTR 40.0%
ATTGTCAGGCAAGAAAGGTT+TGG + chr6_1:80555818-80555837 None:intergenic 40.0%
! GATTGACAACACTGATTGTC+AGG + chr6_1:80555832-80555851 None:intergenic 40.0%
TCCCATATCGCAGAAAATAG+CGG - chr6_1:80555850-80555869 Msa0894550:intron 40.0%
!! ACCGCTATTTTCTGCGATAT+GGG + chr6_1:80555854-80555873 None:intergenic 40.0%
!! AACCGCTATTTTCTGCGATA+TGG + chr6_1:80555855-80555874 None:intergenic 40.0%
GCTATAGTGCTATAGCATAG+TGG + chr6_1:80555959-80555978 None:intergenic 40.0%
GGGATCATATAGGCAATGAA+AGG + chr6_1:80556103-80556122 None:intergenic 40.0%
TCTTCAGTTGTAGGACTATC+AGG + chr6_1:80556242-80556261 None:intergenic 40.0%
! TGAAATCGCAACCTTTTCTC+GGG + chr6_1:80556347-80556366 None:intergenic 40.0%
ACTTATATGAGGAGACTGCA+AGG - chr6_1:80556685-80556704 Msa0894550:five_prime_UTR 40.0%
CTTATATGAGGAGACTGCAA+GGG - chr6_1:80556686-80556705 Msa0894550:five_prime_UTR 40.0%
! TAATGGGCAAAACTACAACG+AGG + chr6_1:80557137-80557156 None:intergenic 40.0%
TAAGTATAGAGGGAAGGTTC+GGG + chr6_1:80557220-80557239 None:intergenic 40.0%
GTCATACACATTCACAGCTT+AGG + chr6_1:80557293-80557312 None:intergenic 40.0%
CTGAACATAACCACATGTGT+AGG - chr6_1:80557416-80557435 Msa0894550:five_prime_UTR 40.0%
ACAACTAACACCTACACATG+TGG + chr6_1:80557429-80557448 None:intergenic 40.0%
GTTCTGTTGCAGGAAATCAA+CGG - chr6_1:80557514-80557533 Msa0894550:five_prime_UTR 40.0%
TTGCAGGAAATCAACGGTAA+TGG - chr6_1:80557520-80557539 Msa0894550:five_prime_UTR 40.0%
! GAAATCAACGGTAATGGTCT+CGG - chr6_1:80557526-80557545 Msa0894550:five_prime_UTR 40.0%
!! GAAAGCTCTTTCTGAAACAG+AGG - chr6_1:80557604-80557623 Msa0894550:five_prime_UTR 40.0%
AACAGAGGGTGATCTTGTAA+AGG - chr6_1:80557619-80557638 Msa0894550:five_prime_UTR 40.0%
GCAAGCATACCTCAGAAAAA+AGG - chr6_1:80557643-80557662 Msa0894550:five_prime_UTR 40.0%
TCTTCCGGATTTCTTATCAG+CGG + chr6_1:80557678-80557697 None:intergenic 40.0%
!! AGCATCGGTGTTCTAATTGA+AGG - chr6_1:80557740-80557759 Msa0894550:five_prime_UTR 40.0%
! GCATCGGTGTTCTAATTGAA+GGG - chr6_1:80557741-80557760 Msa0894550:five_prime_UTR 40.0%
! AACTGTGAAACCGACTTTGT+CGG - chr6_1:80557764-80557783 Msa0894550:five_prime_UTR 40.0%
ACAGATACAAACTGAACCTG+TGG + chr6_1:80557848-80557867 None:intergenic 40.0%
TCTTGAAACCATTGTGACGA+AGG - chr6_1:80557877-80557896 Msa0894550:five_prime_UTR 40.0%
TTGAGGGAAGAATCTCATAG+AGG - chr6_1:80557966-80557985 Msa0894550:five_prime_UTR 40.0%
GGAAGAATCTCATAGAGGTT+AGG - chr6_1:80557971-80557990 Msa0894550:five_prime_UTR 40.0%
GGAACTATGCTTCCTCAACA+TGG - chr6_1:80550610-80550629 Msa0894550:CDS 45.0%
TTCTTGCAAGCACCATGTTG+AGG + chr6_1:80550625-80550644 None:intergenic 45.0%
CCTCAGAAGGATCAACATCA+AGG + chr6_1:80550704-80550723 None:intergenic 45.0%
CCTTGATGTTGATCCTTCTG+AGG - chr6_1:80550701-80550720 Msa0894550:CDS 45.0%
! ACACCATTGGAGAGTCTTGT+TGG + chr6_1:80550782-80550801 None:intergenic 45.0%
! ACTCTCCAATGGTGTCAAGA+TGG - chr6_1:80550787-80550806 Msa0894550:intron 45.0%
! TCCAATGGTGTCAAGATGGA+GGG - chr6_1:80550791-80550810 Msa0894550:intron 45.0%
!! AGGGAAGCTCTAAAGCAAGT+GGG - chr6_1:80550810-80550829 Msa0894550:intron 45.0%
AAGCAAGTGGGGAATATCTC+TGG - chr6_1:80550822-80550841 Msa0894550:intron 45.0%
AAGTGGGGAATATCTCTGGT+TGG - chr6_1:80550826-80550845 Msa0894550:intron 45.0%
AGTGGGGAATATCTCTGGTT+GGG - chr6_1:80550827-80550846 Msa0894550:intron 45.0%
GGTAGAAAATATAGGGGGTG+AGG - chr6_1:80550913-80550932 Msa0894550:intron 45.0%
!!! TCAGTCTCGGTGTTTTTGGA+GGG + chr6_1:80551000-80551019 None:intergenic 45.0%
!!! TTCAGTCTCGGTGTTTTTGG+AGG + chr6_1:80551001-80551020 None:intergenic 45.0%
!!! GGTTTCAGTCTCGGTGTTTT+TGG + chr6_1:80551004-80551023 None:intergenic 45.0%
!!! GAGGTTTTGGGTTTCAGTCT+CGG + chr6_1:80551013-80551032 None:intergenic 45.0%
!! GTTGATGGTGTTCGTGCTAT+AGG - chr6_1:80551335-80551354 Msa0894550:intron 45.0%
TGCTATAGGAATTTGGGGGA+TGG - chr6_1:80551349-80551368 Msa0894550:intron 45.0%
GCTATAGGAATTTGGGGGAT+GGG - chr6_1:80551350-80551369 Msa0894550:intron 45.0%
AACTAGCTGTGCATCGTGTA+TGG - chr6_1:80551645-80551664 Msa0894550:intron 45.0%
TTGGTCGTAGTGTGGTTGAA+TGG - chr6_1:80551909-80551928 Msa0894550:intron 45.0%
! GGTTGAATGGAAGAGTGCAT+TGG - chr6_1:80551922-80551941 Msa0894550:intron 45.0%
AAGAGCAAAGAAAGTGGAGC+AGG - chr6_1:80552230-80552249 Msa0894550:intron 45.0%
AGAGCAAAGAAAGTGGAGCA+GGG - chr6_1:80552231-80552250 Msa0894550:intron 45.0%
TTCTGCTGTGGGAATATCTC+AGG - chr6_1:80552489-80552508 Msa0894550:CDS 45.0%
GTGGAGTTGGATCCATCTAT+TGG - chr6_1:80552890-80552909 Msa0894550:five_prime_UTR 45.0%
TGACAACAGAGGACGTTGAT+CGG + chr6_1:80553099-80553118 None:intergenic 45.0%
CAACGTCCTCTGTTGTCAAA+TGG - chr6_1:80553101-80553120 Msa0894550:five_prime_UTR 45.0%
CATGGTCCATTTGACAACAG+AGG + chr6_1:80553110-80553129 None:intergenic 45.0%
AGTGGGAAGTGATGAATGGT+GGG + chr6_1:80553137-80553156 None:intergenic 45.0%
CAAGTTTGGTAAGCTTCCTC+AGG + chr6_1:80553310-80553329 None:intergenic 45.0%
!! CTTGGAGCATTGCATGTTGT+TGG - chr6_1:80553340-80553359 Msa0894550:five_prime_UTR 45.0%
GTGGTAGCAAAAGGAAGTTG+AGG + chr6_1:80553374-80553393 None:intergenic 45.0%
! CTTCCTTTTGCTACCACCAT+TGG - chr6_1:80553377-80553396 Msa0894550:five_prime_UTR 45.0%
ACTGTCCAAAATTGGGTGAG+AGG - chr6_1:80553492-80553511 Msa0894550:five_prime_UTR 45.0%
CTGTCCAAAATTGGGTGAGA+GGG - chr6_1:80553493-80553512 Msa0894550:five_prime_UTR 45.0%
! CATTCCCTCTCACCCAATTT+TGG + chr6_1:80553500-80553519 None:intergenic 45.0%
!! ATCAACAATCAGAGCATCGG+TGG - chr6_1:80553629-80553648 Msa0894550:five_prime_UTR 45.0%
GGGGGAAGTAGATTATCCAT+AGG + chr6_1:80553850-80553869 None:intergenic 45.0%
ATTCATGATAGCACTCTCGG+GGG + chr6_1:80553868-80553887 None:intergenic 45.0%
AATCTTGCATTTCCGAGCCA+AGG + chr6_1:80554014-80554033 None:intergenic 45.0%
! GGCTCGGAAATGCAAGATTT+TGG - chr6_1:80554015-80554034 Msa0894550:intron 45.0%
! ACTTGTTCTGGTTGCAGTTG+CGG + chr6_1:80554061-80554080 None:intergenic 45.0%
ATCTTCAGTACCTCTGCTTG+CGG + chr6_1:80554156-80554175 None:intergenic 45.0%
!! AGAAACAGAAGTATCCGTGG+AGG - chr6_1:80554450-80554469 Msa0894550:five_prime_UTR 45.0%
AGGTGAATTTGGTACCTCCA+CGG + chr6_1:80554467-80554486 None:intergenic 45.0%
GCTTTCGTAAAACCAGCGTT+GGG + chr6_1:80554565-80554584 None:intergenic 45.0%
GATGCCTCCTGTAAAGAATG+AGG - chr6_1:80554615-80554634 Msa0894550:five_prime_UTR 45.0%
! AGAATGAGGATTTGGTTCCC+GGG - chr6_1:80554629-80554648 Msa0894550:five_prime_UTR 45.0%
!!! GATTTTGGAGCTTTCACGGA+CGG - chr6_1:80554703-80554722 Msa0894550:five_prime_UTR 45.0%
TGTAAAGGACGTTGCAAGTG+TGG - chr6_1:80554759-80554778 Msa0894550:five_prime_UTR 45.0%
GGCTGTTGGACAAGAAGTTA+CGG - chr6_1:80554783-80554802 Msa0894550:five_prime_UTR 45.0%
TGGACAAGAAGTTACGGTGA+AGG - chr6_1:80554789-80554808 Msa0894550:five_prime_UTR 45.0%
ATGCGTGAAAAAGCTGATGC+TGG - chr6_1:80554853-80554872 Msa0894550:five_prime_UTR 45.0%
AGGAGGGATTCTTCGAAATC+TGG - chr6_1:80554922-80554941 Msa0894550:five_prime_UTR 45.0%
GTTGTAGGTTAGGAGTTGCA+TGG - chr6_1:80554975-80554994 Msa0894550:five_prime_UTR 45.0%
AGGTTAGGAGTTGCATGGTA+CGG - chr6_1:80554980-80554999 Msa0894550:five_prime_UTR 45.0%
GTACGGTGAAGAATGTGATG+AGG - chr6_1:80554997-80555016 Msa0894550:five_prime_UTR 45.0%
GTGAAGAATGTGATGAGGAG+TGG - chr6_1:80555002-80555021 Msa0894550:five_prime_UTR 45.0%
TAGAAATCCTTCCTCCCCTT+CGG + chr6_1:80555029-80555048 None:intergenic 45.0%
AGGATTTCTACCGTAAGCTG+AGG - chr6_1:80555039-80555058 Msa0894550:five_prime_UTR 45.0%
GAAGGAAGGAGCTAGTTCAT+TGG - chr6_1:80555174-80555193 Msa0894550:five_prime_UTR 45.0%
GAAGGAGCTAGTTCATTGGT+CGG - chr6_1:80555178-80555197 Msa0894550:five_prime_UTR 45.0%
ATCATCCGCAACAGTTGTTG+AGG + chr6_1:80555206-80555225 None:intergenic 45.0%
! AACTGACTCACTGGTTGAAG+TGG - chr6_1:80555369-80555388 Msa0894550:five_prime_UTR 45.0%
GATTCAATGATAACAGGGCC+AGG + chr6_1:80555508-80555527 None:intergenic 45.0%
CAAGAACCTTCTCCTTCTTG+AGG + chr6_1:80555530-80555549 None:intergenic 45.0%
CCTTTATTCAAGCTTCCCTC+AGG + chr6_1:80555778-80555797 None:intergenic 45.0%
CCTGAGGGAAGCTTGAATAA+AGG - chr6_1:80555775-80555794 Msa0894550:five_prime_UTR 45.0%
CAGGCAAGAAAGGTTTGGAA+AGG + chr6_1:80555813-80555832 None:intergenic 45.0%
! CACTGATTGTCAGGCAAGAA+AGG + chr6_1:80555823-80555842 None:intergenic 45.0%
GCTGTAACACTATGGCATAG+CGG + chr6_1:80555888-80555907 None:intergenic 45.0%
! ATAGTGGGGCTGTAACACTA+TGG + chr6_1:80555896-80555915 None:intergenic 45.0%
GTTGTAGGACTATCAGGAGA+GGG + chr6_1:80556236-80556255 None:intergenic 45.0%
AGTTGTAGGACTATCAGGAG+AGG + chr6_1:80556237-80556256 None:intergenic 45.0%
TATGGCGCTTCTTCAGTTGT+AGG + chr6_1:80556251-80556270 None:intergenic 45.0%
GGCATTACTGCTTCAGATGA+AGG - chr6_1:80556321-80556340 Msa0894550:five_prime_UTR 45.0%
! TCATACTGTTTGGCCCCTTT+TGG - chr6_1:80556452-80556471 Msa0894550:five_prime_UTR 45.0%
CTTAGCACCCTGATAAAGCA+TGG + chr6_1:80557179-80557198 None:intergenic 45.0%
TAACGCTGACATGTCGACAT+TGG - chr6_1:80557369-80557388 Msa0894550:intron 45.0%
TCGCAGTTGCTTAACCAATG+AGG + chr6_1:80557552-80557571 None:intergenic 45.0%
AAGCAACTGCGAGAAGAAAC+CGG - chr6_1:80557560-80557579 Msa0894550:five_prime_UTR 45.0%
CTAGCAGCTGAAGGAAGAAT+TGG - chr6_1:80557698-80557717 Msa0894550:five_prime_UTR 45.0%
CGGCAGAAGTGAGAAATTCA+AGG - chr6_1:80557784-80557803 Msa0894550:five_prime_UTR 45.0%
GCGAGTGTCTTCACCTCTAA+AGG + chr6_1:80550439-80550458 None:intergenic 50.0%
GAGCTTCTTCGAGCAATCGA+AGG - chr6_1:80550558-80550577 Msa0894550:CDS 50.0%
GTTTGCTTTCGCACCTCAGA+AGG + chr6_1:80550717-80550736 None:intergenic 50.0%
! CTCCAATGGTGTCAAGATGG+AGG - chr6_1:80550790-80550809 Msa0894550:intron 50.0%
TCCCTCCATCTTGACACCAT+TGG + chr6_1:80550795-80550814 None:intergenic 50.0%
!! GAGGGAAGCTCTAAAGCAAG+TGG - chr6_1:80550809-80550828 Msa0894550:intron 50.0%
!! GGGAAGCTCTAAAGCAAGTG+GGG - chr6_1:80550811-80550830 Msa0894550:intron 50.0%
ATAGGAATTTGGGGGATGGG+AGG - chr6_1:80551353-80551372 Msa0894550:intron 50.0%
ATTTGGGGGATGGGAGGAAT+AGG - chr6_1:80551359-80551378 Msa0894550:intron 50.0%
TTTGGGGGATGGGAGGAATA+GGG - chr6_1:80551360-80551379 Msa0894550:intron 50.0%
AGGGAAGACAACCCTTGCTA+TGG - chr6_1:80551379-80551398 Msa0894550:intron 50.0%
GCTGTGCATCGTGTATGGTT+AGG - chr6_1:80551650-80551669 Msa0894550:intron 50.0%
CATCGTGTATGGTTAGGTGC+AGG - chr6_1:80551656-80551675 Msa0894550:intron 50.0%
GATTCTGTCCGGGTCAAAAG+TGG + chr6_1:80551755-80551774 None:intergenic 50.0%
AAAGAAAGTGGAGCAGGGTG+TGG - chr6_1:80552236-80552255 Msa0894550:intron 50.0%
GACAACAGAGGACGTTGATC+GGG + chr6_1:80553098-80553117 None:intergenic 50.0%
! TGATGAATGGTGGGGCAACA+TGG + chr6_1:80553128-80553147 None:intergenic 50.0%
GTGGGAAGTGATGAATGGTG+GGG + chr6_1:80553136-80553155 None:intergenic 50.0%
GAGTGGGAAGTGATGAATGG+TGG + chr6_1:80553138-80553157 None:intergenic 50.0%
TGGGAGTGGGAAGTGATGAA+TGG + chr6_1:80553141-80553160 None:intergenic 50.0%
! CTTTTGCTACCACCATTGGG+CGG - chr6_1:80553381-80553400 Msa0894550:five_prime_UTR 50.0%
! TTTTGCTACCACCATTGGGC+GGG - chr6_1:80553382-80553401 Msa0894550:five_prime_UTR 50.0%
CGGCCAAATCAAGTCACCTA+TGG - chr6_1:80553831-80553850 Msa0894550:intron 50.0%
CACAAACAGCGGAAACAGCA+TGG + chr6_1:80554329-80554348 None:intergenic 50.0%
! CGTAAAACCAGCGTTGGGAT+CGG + chr6_1:80554560-80554579 None:intergenic 50.0%
GGCTTTCGTAAAACCAGCGT+TGG + chr6_1:80554566-80554585 None:intergenic 50.0%
! GAATGAGGATTTGGTTCCCG+GGG - chr6_1:80554630-80554649 Msa0894550:five_prime_UTR 50.0%
TTTCCCAGTAAAAGCTGCCC+CGG + chr6_1:80554650-80554669 None:intergenic 50.0%
CAACAAACGCACCAAACCGT+TGG + chr6_1:80554684-80554703 None:intergenic 50.0%
AAAGGACGTTGCAAGTGTGG+TGG - chr6_1:80554762-80554781 Msa0894550:five_prime_UTR 50.0%
TCGAAGAATCCCTCCTCTCA+GGG + chr6_1:80554918-80554937 None:intergenic 50.0%
TTCGAAGAATCCCTCCTCTC+AGG + chr6_1:80554919-80554938 None:intergenic 50.0%
CTACCGTAAGCTGAGGAAGA+TGG - chr6_1:80555046-80555065 Msa0894550:five_prime_UTR 50.0%
TCGCCATCTTCCTCAGCTTA+CGG + chr6_1:80555052-80555071 None:intergenic 50.0%
TAAGCTGAGGAAGATGGCGA+TGG - chr6_1:80555052-80555071 Msa0894550:five_prime_UTR 50.0%
! GAGGAAGATGGCGATGGATT+CGG - chr6_1:80555058-80555077 Msa0894550:five_prime_UTR 50.0%
! AGGAAGATGGCGATGGATTC+GGG - chr6_1:80555059-80555078 Msa0894550:five_prime_UTR 50.0%
CGGTTCCTCAACAACTGTTG+CGG - chr6_1:80555198-80555217 Msa0894550:five_prime_UTR 50.0%
TCAGATGAAGGCCCGAGAAA+AGG - chr6_1:80556333-80556352 Msa0894550:five_prime_UTR 50.0%
AGAAACCGGTGCAGGGATAA+TGG - chr6_1:80557574-80557593 Msa0894550:five_prime_UTR 50.0%
ACAGTCCATTATCCCTGCAC+CGG + chr6_1:80557582-80557601 None:intergenic 50.0%
!! TCCTTCAGCTGCTAGTCTTC+CGG + chr6_1:80557693-80557712 None:intergenic 50.0%
CTCACTTCTGCCGACAAAGT+CGG + chr6_1:80557777-80557796 None:intergenic 50.0%
GCAAGTGTTTGCTTGTCCAC+AGG - chr6_1:80557829-80557848 Msa0894550:five_prime_UTR 50.0%
!!! GTCTCGGTGTTTTTGGAGGG+AGG + chr6_1:80550997-80551016 None:intergenic 55.0%
CGCCCAATGGTGGTAGCAAA+AGG + chr6_1:80553383-80553402 None:intergenic 55.0%
ATCTTGTTCCCGCCCAATGG+TGG + chr6_1:80553393-80553412 None:intergenic 55.0%
CTCATCTTGTTCCCGCCCAA+TGG + chr6_1:80553396-80553415 None:intergenic 55.0%
GGCATGAAGGTGGAGAGTTG+CGG - chr6_1:80553923-80553942 Msa0894550:intron 55.0%
GCATGAAGGTGGAGAGTTGC+GGG - chr6_1:80553924-80553943 Msa0894550:intron 55.0%
! TGGAGAGTTGCGGGTATCGT+TGG - chr6_1:80553933-80553952 Msa0894550:intron 55.0%
! GGAGAGTTGCGGGTATCGTT+GGG - chr6_1:80553934-80553953 Msa0894550:intron 55.0%
! AGTTGCGGGTATCGTTGGGT+AGG - chr6_1:80553938-80553957 Msa0894550:intron 55.0%
CTGTTGTCAACCGCAAGCAG+AGG - chr6_1:80554143-80554162 Msa0894550:five_prime_UTR 55.0%
CTTAAGTCCGATCCCAACGC+TGG - chr6_1:80554550-80554569 Msa0894550:five_prime_UTR 55.0%
!!! CCTCGCAGGTTTTGAACGTC+TGG + chr6_1:80554587-80554606 None:intergenic 55.0%
CCAGACGTTCAAAACCTGCG+AGG - chr6_1:80554584-80554603 Msa0894550:five_prime_UTR 55.0%
! TTCCCGGGGCAGCTTTTACT+GGG - chr6_1:80554644-80554663 Msa0894550:five_prime_UTR 55.0%
TTCCCAGTAAAAGCTGCCCC+GGG + chr6_1:80554649-80554668 None:intergenic 55.0%
GTTGCAAGTGTGGTGGCTGT+TGG - chr6_1:80554769-80554788 Msa0894550:five_prime_UTR 55.0%
TGTGATGAGGAGTGGTCCGA+AGG - chr6_1:80555010-80555029 Msa0894550:five_prime_UTR 55.0%
GTGATGAGGAGTGGTCCGAA+GGG - chr6_1:80555011-80555030 Msa0894550:five_prime_UTR 55.0%
TGATGAGGAGTGGTCCGAAG+GGG - chr6_1:80555012-80555031 Msa0894550:five_prime_UTR 55.0%
GCGGATGATGAAAGCGACCA+AGG - chr6_1:80555217-80555236 Msa0894550:five_prime_UTR 55.0%
CGCTTCGGTTTCCTTCTCAG+TGG + chr6_1:80555260-80555279 None:intergenic 55.0%
GGCTCAACTGTCTCTGTTGC+AGG + chr6_1:80555487-80555506 None:intergenic 55.0%
GCAACAGAGACAGTTGAGCC+TGG - chr6_1:80555487-80555506 Msa0894550:intron 55.0%
! GGTAATGGTCTCGGCCTCAT+TGG - chr6_1:80557535-80557554 Msa0894550:five_prime_UTR 55.0%
TGCGAGAAGAAACCGGTGCA+GGG - chr6_1:80557567-80557586 Msa0894550:five_prime_UTR 55.0%
TCCGGAAGACTAGCAGCTGA+AGG - chr6_1:80557689-80557708 Msa0894550:five_prime_UTR 55.0%
!! GGCATCTCGCTTTTCCTCGC+AGG + chr6_1:80554601-80554620 None:intergenic 60.0%
! GTTCCCGGGGCAGCTTTTAC+TGG - chr6_1:80554643-80554662 Msa0894550:five_prime_UTR 60.0%
CAGAGAAATCCGGCCCTGAG+AGG - chr6_1:80554902-80554921 Msa0894550:five_prime_UTR 60.0%
AGAAATCCGGCCCTGAGAGG+AGG - chr6_1:80554905-80554924 Msa0894550:five_prime_UTR 60.0%
GAAATCCGGCCCTGAGAGGA+GGG - chr6_1:80554906-80554925 Msa0894550:five_prime_UTR 60.0%
AGAATCCCTCCTCTCAGGGC+CGG + chr6_1:80554914-80554933 None:intergenic 60.0%
CTGCGAGAAGAAACCGGTGC+AGG - chr6_1:80557566-80557585 Msa0894550:five_prime_UTR 60.0%
TGAGGAGTGGTCCGAAGGGG+AGG - chr6_1:80555015-80555034 Msa0894550:five_prime_UTR 65.0%
GAGTGGTCCGAAGGGGAGGA+AGG - chr6_1:80555019-80555038 Msa0894550:five_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 80550121 80558131 80550121 ID=Msa0894550;Name=Msa0894550
chr6_1 mRNA 80550121 80558131 80550121 ID=Msa0894550-mRNA-1;Parent=Msa0894550;Name=Msa0894550-mRNA-1;_AED=0.17;_eAED=0.17;_QI=4538|0.83|0.85|1|0.83|0.71|7|146|225
chr6_1 exon 80550121 80550726 80550121 ID=Msa0894550-mRNA-1:exon:13524;Parent=Msa0894550-mRNA-1
chr6_1 exon 80552413 80552551 80552413 ID=Msa0894550-mRNA-1:exon:13523;Parent=Msa0894550-mRNA-1
chr6_1 exon 80552710 80553832 80552710 ID=Msa0894550-mRNA-1:exon:13522;Parent=Msa0894550-mRNA-1
chr6_1 exon 80554088 80555479 80554088 ID=Msa0894550-mRNA-1:exon:13521;Parent=Msa0894550-mRNA-1
chr6_1 exon 80555593 80555850 80555593 ID=Msa0894550-mRNA-1:exon:13520;Parent=Msa0894550-mRNA-1
chr6_1 exon 80555955 80557056 80555955 ID=Msa0894550-mRNA-1:exon:13519;Parent=Msa0894550-mRNA-1
chr6_1 exon 80557390 80558131 80557390 ID=Msa0894550-mRNA-1:exon:13518;Parent=Msa0894550-mRNA-1
chr6_1 five_prime_UTR 80557390 80558131 80557390 ID=Msa0894550-mRNA-1:five_prime_utr;Parent=Msa0894550-mRNA-1
chr6_1 five_prime_UTR 80555955 80557056 80555955 ID=Msa0894550-mRNA-1:five_prime_utr;Parent=Msa0894550-mRNA-1
chr6_1 five_prime_UTR 80555593 80555850 80555593 ID=Msa0894550-mRNA-1:five_prime_utr;Parent=Msa0894550-mRNA-1
chr6_1 five_prime_UTR 80554088 80555479 80554088 ID=Msa0894550-mRNA-1:five_prime_utr;Parent=Msa0894550-mRNA-1
chr6_1 five_prime_UTR 80552789 80553832 80552789 ID=Msa0894550-mRNA-1:five_prime_utr;Parent=Msa0894550-mRNA-1
chr6_1 CDS 80552710 80552788 80552710 ID=Msa0894550-mRNA-1:cds;Parent=Msa0894550-mRNA-1
chr6_1 CDS 80552413 80552551 80552413 ID=Msa0894550-mRNA-1:cds;Parent=Msa0894550-mRNA-1
chr6_1 CDS 80550267 80550726 80550267 ID=Msa0894550-mRNA-1:cds;Parent=Msa0894550-mRNA-1
chr6_1 three_prime_UTR 80550121 80550266 80550121 ID=Msa0894550-mRNA-1:three_prime_utr;Parent=Msa0894550-mRNA-1
Gene Sequence

>Msa0894550

ATGGAAAGGAAGAATTTGCACCTGCAACAGAGACAGTTGAGCCTGGCCCTGTTATCATTGAATCCTCAAGAAGGAGAAGATGAAGATGTTGGAGCTGTTCCCGAGAACAATGAGATTGATGCTAGTTTGACTGGACAAAGTGATGATTTGTCTCCTGAGGGAAGCTTGAATAAAGGTTATGCTAGTTTCCTTTCCAAACCTTTCTTGCCTGACAATCAGAAATCAACGGTAATGGTCTCGGCCTCATTGGTTAAGCAACTGCGAGAAGAAACCGGTGCAGGGATAATGGACTGTAAGAAAGCTCTTTCTGAAACAGAGGGTGATCTTGTAAAGGTGCAAGCATACCTCAGAAAAAAGGGTCTCTTATCCGCTGATAAGAAATCCGGAAGACTAGCAGCTGAAGGAAGAATTGGTACATACAATCACGATTCAAGCATCGGTGTTCTAATTGAAGGGAACTGTGAAACCGACTTTGTCGGCAGAAGTGAGAAATTCAAGGAGTGTGTTGATGATCTTGCAATGCAAGTGTTTGCTTGTCCACAGGTTCAGTTTGTATCTGTTGAAGATATTCTTGAAACCATTGTGACGAAGGAAAAAGAACTTGAGTTGCAGAGAGAAGAACTTGCTTTGAAACCCGAGAACATAGCAGAGAAAATTGTTGAGGGAAGAATCTCATAG
Protein sequence

>Msa0894550

MERKNLHLQQRQLSLALLSLNPQEGEDEDVGAVPENNEIDASLTGQSDDLSPEGSLNKGYASFLSKPFLPDNQKSTVMVSASLVKQLREETGAGIMDCKKALSETEGDLVKVQAYLRKKGLLSADKKSGRLAAEGRIGTYNHDSSIGVLIEGNCETDFVGRSEKFKECVDDLAMQVFACPQVQFVSVEDILETIVTKEKELELQREELALKPENIAEKIVEGRIS*