AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0959750

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0959750 MtrunA17_Chr6g0486531 88.136 59 7 0 39 97 854 912 1.47e-28 107
Msa0959750 MtrunA17_Chr6g0486531 71.186 59 17 0 39 97 613 671 9.88e-23 91.3
Msa0959750 MtrunA17_Chr6g0486211 82.759 58 10 0 39 96 23 80 8.14e-27 94.7
Msa0959750 MtrunA17_Chr6g0486321 85.714 56 8 0 42 97 47 102 6.68e-26 95.1
Msa0959750 MtrunA17_Chr6g0486241 81.818 55 10 0 39 93 48 102 9.41e-23 87.0
Msa0959750 MtrunA17_Chr6g0486491 82.609 46 8 0 52 97 1 46 1.93e-20 78.6
Msa0959750 MtrunA17_Chr6g0460441 66.071 56 19 0 42 97 20 75 1.26e-19 78.2
Msa0959750 MtrunA17_Chr2g0299591 85.000 40 6 0 39 78 25 64 8.14e-17 68.6
Msa0959750 MtrunA17_Chr6g0484381 87.097 31 4 0 67 97 37 67 7.19e-11 55.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0959750 AT4G29060.2 74.576 59 15 0 39 97 523 581 4.39e-24 95.5
Msa0959750 AT4G29060.1 74.576 59 15 0 39 97 523 581 6.74e-24 94.7
Msa0959750 AT4G29060.1 67.606 71 20 1 30 97 749 819 2.34e-23 93.2

Find 301 sgRNAs with CRISPR-Local

Find 514 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTCCCTCTCACCCAATTT+TGG 0.139288 6_3:+77160301 None:intergenic
TTCTGTTTCTTTGGCTGATA+TGG 0.155826 6_3:+77159364 None:intergenic
TGGCTAGAAAGATTAAATTT+AGG 0.167667 6_3:-77160540 Msa0959750:five_prime_UTR
AAAGCTTGTTTACTTGAATT+TGG 0.181954 6_3:-77160875 Msa0959750:five_prime_UTR
TTTGGTGCGTTTGTTGATTT+TGG 0.187251 6_3:-77159113 Msa0959750:five_prime_UTR
ACAATAATTGATTGGTTTAC+TGG 0.192876 6_3:+77163576 None:intergenic
CTAGAAAAGATAATAGATTT+TGG 0.199854 6_3:-77160979 Msa0959750:five_prime_UTR
TATGAGTAATTATGAAAATT+TGG 0.204510 6_3:-77161977 Msa0959750:five_prime_UTR
CACGGATACTTCTGTTTCTT+TGG 0.210977 6_3:+77159355 None:intergenic
TCATCTGCAACAGGTGAATT+TGG 0.213637 6_3:+77159326 None:intergenic
GGCTCGGAAATGCAAGATTT+TGG 0.220530 6_3:-77159783 Msa0959750:five_prime_UTR
TAGATCCAATGTCCTCAAAT+TGG 0.223757 6_3:+77161017 None:intergenic
GTGTTCGTGCTATAGGAATT+TGG 0.237140 6_3:-77162455 Msa0959750:five_prime_UTR
AGCATCAATCTCATTGTTTC+GGG 0.239997 6_3:+77158080 None:intergenic
TTGTTATTGTCATGCATAAT+TGG 0.242300 6_3:+77160124 None:intergenic
CGAGAGTGCTATCATGAATT+TGG 0.245129 6_3:-77159929 Msa0959750:five_prime_UTR
AACATACCCAACAACATATT+TGG 0.253821 6_3:-77160832 Msa0959750:five_prime_UTR
GGCTCAACTGTCTCTGTTGC+AGG 0.255865 6_3:+77158317 None:intergenic
TTCATTCATTTCAAAAGATT+TGG 0.257344 6_3:-77162538 Msa0959750:five_prime_UTR
AGATTTAGCTTCTCAAGATT+TGG 0.258099 6_3:+77160949 None:intergenic
GAGCATATATTGAAAGAGTA+TGG 0.259539 6_3:-77162090 Msa0959750:five_prime_UTR
ATGGATGATGCAATTCATTA+AGG 0.262168 6_3:-77160257 Msa0959750:five_prime_UTR
TTTAAAATTACAGAATATTC+AGG 0.269878 6_3:-77159896 Msa0959750:five_prime_UTR
GGCTAGAAAGATTAAATTTA+GGG 0.272492 6_3:-77160539 Msa0959750:five_prime_UTR
CTATGCCGAGAGTTTGAAAT+AGG 0.273768 6_3:+77162289 None:intergenic
CAACTTGGTATTTCACTTCC+TGG 0.273996 6_3:+77160193 None:intergenic
TTGCTAAGTTGAACTCTTGT+AGG 0.276303 6_3:+77159828 None:intergenic
CCAAACTTGTATATTTAAAC+TGG 0.296890 6_3:-77160476 Msa0959750:five_prime_UTR
TAGCATCAATCTCATTGTTT+CGG 0.301233 6_3:+77158079 None:intergenic
ACCAAATCCTCATTCTTTAC+AGG 0.301884 6_3:+77159179 None:intergenic
ATTACAAAATCATTTACTTT+TGG 0.303922 6_3:-77162490 Msa0959750:five_prime_UTR
CTTGAGGATTCAATGATAAC+AGG 0.307821 6_3:+77158290 None:intergenic
ACCCTTGCTATGGATTTATA+TGG 0.309480 6_3:-77162408 Msa0959750:five_prime_UTR
TGTTCGTGCTATAGGAATTT+GGG 0.310129 6_3:-77162454 Msa0959750:five_prime_UTR
CAACAATCATAAACTGATAA+TGG 0.310238 6_3:-77158356 Msa0959750:exon
TCCTTCAGCTGCTAGTCTTC+CGG 0.310289 6_3:+77156120 None:intergenic
TATCCATAGGTGACTTGATT+TGG 0.312621 6_3:+77159964 None:intergenic
CAATGTTATGAATGAGAAAA+TGG 0.314195 6_3:-77161521 Msa0959750:intron
CGATGGATTCGGGAATATAA+TGG 0.316965 6_3:-77158732 Msa0959750:five_prime_UTR
CTTCAATTCTACAAGTTCAT+TGG 0.318544 6_3:+77161202 None:intergenic
TCACTCATAAGCATAGAAAA+TGG 0.321400 6_3:-77161655 Msa0959750:five_prime_UTR
TTCAATTCTACAAGTTCATT+GGG 0.324926 6_3:+77161203 None:intergenic
AGGAAGATGGCGATGGATTC+GGG 0.325331 6_3:-77158742 Msa0959750:five_prime_UTR
GAGGAAGATGGCGATGGATT+CGG 0.330444 6_3:-77158743 Msa0959750:five_prime_UTR
GATTTAGCTTCTCAAGATTT+GGG 0.336452 6_3:+77160950 None:intergenic
CCAGTTTAAATATACAAGTT+TGG 0.336921 6_3:+77160476 None:intergenic
CACAAAATTTGTTGTAGGTT+AGG 0.337629 6_3:-77158836 Msa0959750:five_prime_UTR
CCGGATTTCTCTGTATTGTT+TGG 0.339087 6_3:+77158909 None:intergenic
TCCTGTAAAGAATGAGGATT+TGG 0.339661 6_3:-77159180 Msa0959750:five_prime_UTR
GAAGTAGTTATGACTTGTTC+TGG 0.343479 6_3:+77159728 None:intergenic
CTCAACATTATACAAATATA+TGG 0.343990 6_3:+77161379 None:intergenic
TCGTAGGCTACGTTGTAAAA+AGG 0.345614 6_3:-77162220 Msa0959750:five_prime_UTR
GGAAAATCTTTGTTGGAGAT+TGG 0.350910 6_3:-77158710 Msa0959750:five_prime_UTR
ATACTTTCATCGAGAATTGC+TGG 0.351035 6_3:+77159995 None:intergenic
CCATTAGCAATTACAGTATT+GGG 0.353373 6_3:-77161922 Msa0959750:five_prime_UTR
AAGAATGAGGATTTGGTTCC+CGG 0.354645 6_3:-77159173 Msa0959750:five_prime_UTR
GAAATCACAAAATTTGTTGT+AGG 0.358719 6_3:-77158841 Msa0959750:five_prime_UTR
CTGAATATACAAGTGTTTAG+AGG 0.359501 6_3:+77163457 None:intergenic
AGAAACCGGTGCAGGGATAA+TGG 0.359757 6_3:-77156236 Msa0959750:CDS
TGTGGATTTCATGCTGATAT+TGG 0.365713 6_3:-77161700 Msa0959750:five_prime_UTR
GACCAAGGAAGTGTTATAAA+TGG 0.367748 6_3:-77158569 Msa0959750:five_prime_UTR
GATGACACTAATCTTCAAAA+AGG 0.370396 6_3:-77163278 Msa0959750:five_prime_UTR
GCTTACATCATCAATGAAAC+AGG 0.371102 6_3:+77162359 None:intergenic
CATCAAATCGATGAGAGATT+TGG 0.372400 6_3:+77162385 None:intergenic
TGTGATTTCCTATCTTTCCT+TGG 0.374590 6_3:+77158855 None:intergenic
ACCATTAGCAATTACAGTAT+TGG 0.377852 6_3:-77161923 Msa0959750:five_prime_UTR
GATGTGTTTGTCACCTTTAG+AGG 0.383369 6_3:-77163374 Msa0959750:five_prime_UTR
GCATGAAGGTGGAGAGTTGC+GGG 0.386580 6_3:-77159874 Msa0959750:five_prime_UTR
AGAGCAAGATTAAACAACTA+TGG 0.389511 6_3:-77161172 Msa0959750:five_prime_UTR
GTTGATGGTGTTCGTGCTAT+AGG 0.393529 6_3:-77162462 Msa0959750:five_prime_UTR
CTAGCAGCTGAAGGAAGAAT+TGG 0.394602 6_3:-77156112 Msa0959750:CDS
TGTGATGATTGCATATTTGA+TGG 0.400435 6_3:+77162262 None:intergenic
CTTTCTTTACAATAATTGAT+TGG 0.401667 6_3:+77163568 None:intergenic
TATACAAGTGTTTAGAGGAT+TGG 0.404838 6_3:+77163462 None:intergenic
CACAGTATCTTCCCAATTTG+AGG 0.405085 6_3:-77161029 Msa0959750:intron
ACACCATTGGAGAGTCTTGT+TGG 0.405159 6_3:+77163018 None:intergenic
TTCGAAGAATCCCTCCTCTC+AGG 0.405650 6_3:+77158885 None:intergenic
TATTGGATTGTTAAACACTT+TGG 0.408030 6_3:+77160771 None:intergenic
TTTCTTAGAAGTCCAATAGA+TGG 0.408303 6_3:+77160895 None:intergenic
TCTGAAAGTTTAGCTGTTGA+AGG 0.410361 6_3:-77158518 Msa0959750:five_prime_UTR
GACAATAACAATAATATCAT+TGG 0.411857 6_3:-77160112 Msa0959750:five_prime_UTR
CTTGTTCGAACTTCAGCTAA+AGG 0.414251 6_3:+77159287 None:intergenic
AGGAGGGATTCTTCGAAATC+TGG 0.415946 6_3:-77158879 Msa0959750:five_prime_UTR
GTGGAGTTGGATCCATCTAT+TGG 0.418581 6_3:-77160907 Msa0959750:five_prime_UTR
TCATTTCAAAAGATTTGGTT+GGG 0.418707 6_3:-77162533 Msa0959750:five_prime_UTR
TATAATGGGAAAATCTTTGT+TGG 0.419087 6_3:-77158717 Msa0959750:five_prime_UTR
AACAAGATGAGAACAAATAT+TGG 0.419375 6_3:-77160393 Msa0959750:five_prime_UTR
GGATCAACATCAAGGAAAAC+AGG 0.420452 6_3:+77163104 None:intergenic
AAAGATTTGTGAATGCGTTA+AGG 0.420693 6_3:-77163147 Msa0959750:five_prime_UTR
CCCAATACTGTAATTGCTAA+TGG 0.421570 6_3:+77161922 None:intergenic
AACTTAAAGCGTTGATTTCG+TGG 0.423956 6_3:+77163543 None:intergenic
TGTGGATCAAGTTCAACAAT+TGG 0.428159 6_3:-77162178 Msa0959750:five_prime_UTR
AGATCCAATGTCCTCAAATT+GGG 0.429785 6_3:+77161018 None:intergenic
CTCTGATTGTTGATCCAACT+TGG 0.430642 6_3:+77160178 None:intergenic
AAGCAAGTGGGGAATATCTC+TGG 0.434713 6_3:-77162975 Msa0959750:five_prime_UTR
TCATTGGGGTGAAAACTTGA+TGG 0.435111 6_3:+77161218 None:intergenic
ACATCCATGACATCATTATC+TGG 0.435323 6_3:+77161835 None:intergenic
CACCATTTATAACACTTCCT+TGG 0.437574 6_3:+77158567 None:intergenic
AAGAGCAAAGAAAGTGGAGC+AGG 0.438922 6_3:-77161567 Msa0959750:five_prime_UTR
ACTGGAGCATTGCATGTTGT+TGG 0.440518 6_3:-77160458 Msa0959750:five_prime_UTR
CGCCCAATGGTGGTAGCAAA+AGG 0.442263 6_3:+77160418 None:intergenic
CTTGAAAATCTTAATATGAA+TGG 0.444845 6_3:-77160799 Msa0959750:five_prime_UTR
TCTTATCAAAGTAGGATTGT+TGG 0.445940 6_3:+77160230 None:intergenic
AACTAGCTGTGCATCGTGTA+TGG 0.446874 6_3:-77162152 Msa0959750:five_prime_UTR
TTTACTAGTGTTACTATATG+TGG 0.455536 6_3:+77163674 None:intergenic
CAAATTCATGATAGCACTCT+CGG 0.456830 6_3:+77159930 None:intergenic
CAACGTCCTCTGTTGTCAAA+TGG 0.456889 6_3:-77160696 Msa0959750:five_prime_UTR
TCCCTCCATCTTGACACCAT+TGG 0.457127 6_3:+77163005 None:intergenic
AATTTGAATCTTATCAAAGT+AGG 0.457750 6_3:+77160222 None:intergenic
GACAACAGAGGACGTTGATC+GGG 0.460244 6_3:+77160702 None:intergenic
TTCATTTCAAAAGATTTGGT+TGG 0.460348 6_3:-77162534 Msa0959750:five_prime_UTR
TTCTGCTGTGGGAATATCTC+AGG 0.460426 6_3:-77161308 Msa0959750:five_prime_UTR
GTAAAATCTATCCAACGGTT+TGG 0.461463 6_3:-77159131 Msa0959750:five_prime_UTR
AATCTGGTCCAAGGAAAGAT+AGG 0.464733 6_3:-77158863 Msa0959750:five_prime_UTR
AGTGTTTAGAGGATTGGATA+TGG 0.465069 6_3:+77163468 None:intergenic
TGTAAACATTCAATTGCATC+AGG 0.467015 6_3:+77160564 None:intergenic
GTTTCTTTGGCTGATATGGA+TGG 0.468046 6_3:+77159368 None:intergenic
GATGGATTCGGGAATATAAT+GGG 0.470226 6_3:-77158731 Msa0959750:five_prime_UTR
ATAGTTTGTGAGATTCTGTC+CGG 0.471995 6_3:+77162034 None:intergenic
GCTAAGACCAAATATGTTGT+TGG 0.473201 6_3:+77160825 None:intergenic
GTAGAAACTTCATCTGCAAC+AGG 0.475621 6_3:+77159317 None:intergenic
CAAGTTTGGTAAGCTTCCTC+AGG 0.477197 6_3:+77160490 None:intergenic
CTCATCTTGTTCCCGCCCAA+TGG 0.477230 6_3:+77160405 None:intergenic
CTAAGACCAAATATGTTGTT+GGG 0.482986 6_3:+77160826 None:intergenic
GGAGAGTTGCGGGTATCGTT+GGG 0.483264 6_3:-77159864 Msa0959750:five_prime_UTR
TAGAAATCCTTCCTCCCCTT+CGG 0.483516 6_3:+77158775 None:intergenic
TGGAGAGTTGCGGGTATCGT+TGG 0.484573 6_3:-77159865 Msa0959750:five_prime_UTR
CAAGAACCTTCTCCTTCTTG+AGG 0.485334 6_3:+77158274 None:intergenic
TCTTCCCAATTTGAGGACAT+TGG 0.485671 6_3:-77161022 Msa0959750:five_prime_UTR
GCGAGTGTCTTCACCTCTAA+AGG 0.485792 6_3:+77163361 None:intergenic
AACACATATGTGTTTGTCTT+GGG 0.486762 6_3:+77160640 None:intergenic
TAAACTTTCAGAAGTCGCTT+CGG 0.489229 6_3:+77158529 None:intergenic
TTATCCGCTGATAAGAAATC+CGG 0.489725 6_3:-77156139 Msa0959750:CDS
TCGCCATCTTCCTCAGCTTA+CGG 0.490050 6_3:+77158752 None:intergenic
AAGATTCAAATTGTTAGTCC+AGG 0.491162 6_3:-77160211 Msa0959750:five_prime_UTR
GATGAAAGTGTAACAGAAAG+TGG 0.492231 6_3:-77158407 Msa0959750:five_prime_UTR
GGCTTTCGTAAAACCAGCGT+TGG 0.494577 6_3:+77159238 None:intergenic
AGTGGGGAATATCTCTGGTT+GGG 0.494967 6_3:-77162970 Msa0959750:five_prime_UTR
TGACAACAGAGGACGTTGAT+CGG 0.498371 6_3:+77160701 None:intergenic
CTGAAAGTTTAGCTGTTGAA+GGG 0.499165 6_3:-77158517 Msa0959750:five_prime_UTR
TCTCGATGAAAGTATTGTTA+CGG 0.500645 6_3:-77159987 Msa0959750:five_prime_UTR
CGGCCAAATCAAGTCACCTA+TGG 0.500745 6_3:-77159967 Msa0959750:five_prime_UTR
TTTCCCAGTAAAAGCTGCCC+CGG 0.500991 6_3:+77159154 None:intergenic
CTGCGAGAAGAAACCGGTGC+AGG 0.501344 6_3:-77156244 Msa0959750:CDS
ACTTGTAGAATTGAAGTTGA+CGG 0.501651 6_3:-77161195 Msa0959750:five_prime_UTR
AGCATATATTGAAAGAGTAT+GGG 0.503135 6_3:-77162089 Msa0959750:five_prime_UTR
CGTAAAACCAGCGTTGGGAT+CGG 0.504127 6_3:+77159244 None:intergenic
CAAACAAAGAGCAAAGAAAG+TGG 0.505327 6_3:-77161573 Msa0959750:five_prime_UTR
CCTTGATGTTGATCCTTCTG+AGG 0.507835 6_3:-77163096 Msa0959750:five_prime_UTR
TTGGTCGTAGTGTGGTTGAA+TGG 0.509363 6_3:-77161888 Msa0959750:five_prime_UTR
ATCTTCAGTACCTCTGCTTG+CGG 0.511083 6_3:+77159645 None:intergenic
CAAATCCTATTTCAAACTCT+CGG 0.513944 6_3:-77162294 Msa0959750:five_prime_UTR
AAATTCATGATAGCACTCTC+GGG 0.514389 6_3:+77159931 None:intergenic
GAGTGGTCCGAAGGGGAGGA+AGG 0.515972 6_3:-77158782 Msa0959750:five_prime_UTR
CAAGATTTGCGTTTCACAAG+AGG 0.517861 6_3:-77158671 Msa0959750:five_prime_UTR
GGCCATATAAATCCATAGCA+AGG 0.518220 6_3:+77162406 None:intergenic
AAGCAACTGCGAGAAGAAAC+CGG 0.521340 6_3:-77156250 Msa0959750:CDS
TGTACATTTATGATAATGAA+TGG 0.521352 6_3:-77160040 Msa0959750:five_prime_UTR
GCTTTCGTAAAACCAGCGTT+GGG 0.522883 6_3:+77159239 None:intergenic
AGGGAAGACAACCCTTGCTA+TGG 0.523012 6_3:-77162418 Msa0959750:five_prime_UTR
TATACATACGCACTTATATG+AGG 0.523497 6_3:-77158491 Msa0959750:five_prime_UTR
GTTCGTGCTATAGGAATTTG+GGG 0.528223 6_3:-77162453 Msa0959750:five_prime_UTR
TGGGAGTGGGAAGTGATGAA+TGG 0.529024 6_3:+77160659 None:intergenic
CATTCTTTGTTGAAAGAGCT+AGG 0.530427 6_3:-77161619 Msa0959750:five_prime_UTR
TTTCAAGTAGATGAAGATGT+TGG 0.530580 6_3:-77158110 Msa0959750:intron
TGCTCATCATATTCTGCTGT+GGG 0.530904 6_3:-77161319 Msa0959750:five_prime_UTR
CAATACATTTGAATCAAAAG+AGG 0.530973 6_3:-77160753 Msa0959750:five_prime_UTR
CCAAACAATACAGAGAAATC+CGG 0.531094 6_3:-77158909 Msa0959750:five_prime_UTR
ACTTGTTCTGGTTGCAGTTG+CGG 0.532498 6_3:+77159740 None:intergenic
CTGTCCAAAATTGGGTGAGA+GGG 0.532907 6_3:-77160305 Msa0959750:five_prime_UTR
AGAATCCCTCCTCTCAGGGC+CGG 0.535622 6_3:+77158890 None:intergenic
GCAACAGAGACAGTTGAGCC+TGG 0.535824 6_3:-77158314 Msa0959750:CDS
CTACCGTAAGCTGAGGAAGA+TGG 0.537175 6_3:-77158755 Msa0959750:five_prime_UTR
AGTGGGAAGTGATGAATGGT+GGG 0.537864 6_3:+77160663 None:intergenic
TCGAAGAATCCCTCCTCTCA+GGG 0.539017 6_3:+77158886 None:intergenic
ATCTTGTTCCCGCCCAATGG+TGG 0.539224 6_3:+77160408 None:intergenic
ATCATCCGCAACAGTTGTTG+AGG 0.540849 6_3:+77158598 None:intergenic
GTTTGCTTTCGCACCTCAGA+AGG 0.542302 6_3:+77163083 None:intergenic
GATTCTGTCCGGGTCAAAAG+TGG 0.542586 6_3:+77162045 None:intergenic
AATCTTGCATTTCCGAGCCA+AGG 0.543035 6_3:+77159787 None:intergenic
CCTTCTGATTCTTGATAATG+TGG 0.543639 6_3:-77162196 Msa0959750:five_prime_UTR
CTTGATGGCAAATACTTGAA+AGG 0.545275 6_3:+77161233 None:intergenic
GTTGAGTGATAGCTATGTAA+AGG 0.545322 6_3:-77159057 Msa0959750:five_prime_UTR
ACTCTCCAATGGTGTCAAGA+TGG 0.545390 6_3:-77163010 Msa0959750:five_prime_UTR
CATATATTTGTATAATGTTG+AGG 0.545600 6_3:-77161378 Msa0959750:five_prime_UTR
AAAGAAAGTGGAGCAGGGTG+TGG 0.546404 6_3:-77161561 Msa0959750:five_prime_UTR
GTGATGAGGAGTGGTCCGAA+GGG 0.548531 6_3:-77158790 Msa0959750:five_prime_UTR
CAATGTTGAAACTGACTCAC+TGG 0.549543 6_3:-77158441 Msa0959750:five_prime_UTR
GTTGCAAGTGTGGTGGCTGT+TGG 0.549928 6_3:-77159032 Msa0959750:five_prime_UTR
GATTCAATGATAACAGGGCC+AGG 0.550972 6_3:+77158296 None:intergenic
GAAGGAAGGAGCTAGTTCAT+TGG 0.552591 6_3:-77158627 Msa0959750:five_prime_UTR
GAAAGCTCTTTCTGAAACAG+AGG 0.553530 6_3:-77156206 Msa0959750:CDS
CAACACATATGTGTTTGTCT+TGG 0.554422 6_3:+77160639 None:intergenic
ATGAGAACAAATATTGGTGG+CGG 0.554690 6_3:-77160387 Msa0959750:five_prime_UTR
CTAGAAAGATTAAATTTAGG+GGG 0.556718 6_3:-77160537 Msa0959750:five_prime_UTR
AGCGACGTTGATTACAAAGA+AGG 0.557648 6_3:-77158645 Msa0959750:five_prime_UTR
CTTAAGTCCGATCCCAACGC+TGG 0.558449 6_3:-77159251 Msa0959750:five_prime_UTR
TACAGAATATTCAGGCATGA+AGG 0.558724 6_3:-77159888 Msa0959750:five_prime_UTR
GAAATCCGGCCCTGAGAGGA+GGG 0.559070 6_3:-77158895 Msa0959750:five_prime_UTR
AGAAATCCGGCCCTGAGAGG+AGG 0.560282 6_3:-77158896 Msa0959750:five_prime_UTR
CAACAAACGCACCAAACCGT+TGG 0.560336 6_3:+77159120 None:intergenic
TAAACACTTGTATATTCAGA+TGG 0.561380 6_3:-77163453 Msa0959750:five_prime_UTR
TTGCTCATCATATTCTGCTG+TGG 0.564559 6_3:-77161320 Msa0959750:five_prime_UTR
GAAAATAATCTATGCAAGGA+TGG 0.564768 6_3:+77160616 None:intergenic
AAAATTTATAGATTACATGA+TGG 0.565188 6_3:-77162336 Msa0959750:five_prime_UTR
CTTGAGAAGCTAAATCTGAA+AGG 0.566418 6_3:-77160943 Msa0959750:five_prime_UTR
TGTGATGAGGAGTGGTCCGA+AGG 0.566790 6_3:-77158791 Msa0959750:five_prime_UTR
CTCCAATGGTGTCAAGATGG+AGG 0.568265 6_3:-77163007 Msa0959750:five_prime_UTR
AGAATGAGGATTTGGTTCCC+GGG 0.569157 6_3:-77159172 Msa0959750:five_prime_UTR
GGCATGAAGGTGGAGAGTTG+CGG 0.571127 6_3:-77159875 Msa0959750:five_prime_UTR
GCTGTGCATCGTGTATGGTT+AGG 0.571303 6_3:-77162147 Msa0959750:five_prime_UTR
TGAGAACAAATATTGGTGGC+GGG 0.572691 6_3:-77160386 Msa0959750:five_prime_UTR
CGGTTCCTCAACAACTGTTG+CGG 0.573354 6_3:-77158603 Msa0959750:five_prime_UTR
AACTGACTCACTGGTTGAAG+TGG 0.573670 6_3:-77158432 Msa0959750:five_prime_UTR
GAGTGGGAAGTGATGAATGG+TGG 0.574666 6_3:+77160662 None:intergenic
TATAAATGGTGCCACTGAGA+AGG 0.575300 6_3:-77158555 Msa0959750:five_prime_UTR
TTCTTGCAAGCACCATGTTG+AGG 0.576677 6_3:+77163175 None:intergenic
TATGTGTTTGTCTTGGGAGT+GGG 0.576844 6_3:+77160646 None:intergenic
GCCATATAAATCCATAGCAA+GGG 0.578499 6_3:+77162407 None:intergenic
AAGTCCAGATAATGATGTCA+TGG 0.578591 6_3:-77161839 Msa0959750:five_prime_UTR
ACAGTCCATTATCCCTGCAC+CGG 0.579376 6_3:+77156231 None:intergenic
ATCATAAACTGATAATGGAA+AGG 0.582675 6_3:-77158351 Msa0959750:exon
GGCTGTTGGACAAGAAGTTA+CGG 0.583153 6_3:-77159018 Msa0959750:five_prime_UTR
GTTGTAGGTTAGGAGTTGCA+TGG 0.583293 6_3:-77158826 Msa0959750:five_prime_UTR
TGAGGAGTGGTCCGAAGGGG+AGG 0.583749 6_3:-77158786 Msa0959750:five_prime_UTR
ATGCAATTGAATGTTTACAT+TGG 0.585040 6_3:-77160560 Msa0959750:five_prime_UTR
AAGTGGGGAATATCTCTGGT+TGG 0.586824 6_3:-77162971 Msa0959750:five_prime_UTR
CCTCAGAAGGATCAACATCA+AGG 0.588053 6_3:+77163096 None:intergenic
ACTGTCCAAAATTGGGTGAG+AGG 0.590994 6_3:-77160306 Msa0959750:five_prime_UTR
CGCTTCGGTTTCCTTCTCAG+TGG 0.591068 6_3:+77158544 None:intergenic
AAGATGAGAACAAATATTGG+TGG 0.591298 6_3:-77160390 Msa0959750:five_prime_UTR
TCCAATGGTGTCAAGATGGA+GGG 0.591588 6_3:-77163006 Msa0959750:five_prime_UTR
AACAGAGGGTGATCTTGTAA+AGG 0.592332 6_3:-77156191 Msa0959750:CDS
CCACATTATCAAGAATCAGA+AGG 0.595484 6_3:+77162196 None:intergenic
AGGTTAGGAGTTGCATGGTA+CGG 0.596006 6_3:-77158821 Msa0959750:five_prime_UTR
CAAAGAAAATAATCTATGCA+AGG 0.599117 6_3:+77160612 None:intergenic
GAATGAGGATTTGGTTCCCG+GGG 0.599120 6_3:-77159171 Msa0959750:five_prime_UTR
CAGGAAGTGAAATACCAAGT+TGG 0.599951 6_3:-77160192 Msa0959750:five_prime_UTR
AGGATCTCAGATTTACGTTG+TGG 0.600753 6_3:-77163219 Msa0959750:five_prime_UTR
GAGGGAAGCTCTAAAGCAAG+TGG 0.601872 6_3:-77162988 Msa0959750:five_prime_UTR
GGAACTATGCTTCCTCAACA+TGG 0.603254 6_3:-77163187 Msa0959750:five_prime_UTR
AAAGCTCTTTCTGAAACAGA+GGG 0.603411 6_3:-77156205 Msa0959750:CDS
AAATCCTCATTCTTTACAGG+AGG 0.604341 6_3:+77159182 None:intergenic
TCCGGAAGACTAGCAGCTGA+AGG 0.605549 6_3:-77156121 Msa0959750:CDS
TGTAAAGGACGTTGCAAGTG+TGG 0.605803 6_3:-77159042 Msa0959750:five_prime_UTR
ATTCTTCGAAATCTGGTCCA+AGG 0.607021 6_3:-77158872 Msa0959750:five_prime_UTR
TTGAATCCTCAAGAAGGAGA+AGG 0.607295 6_3:-77158280 Msa0959750:intron
GCTAGAAAGATTAAATTTAG+GGG 0.607842 6_3:-77160538 Msa0959750:five_prime_UTR
ATACATCACGATTCAAGCAT+CGG 0.608259 6_3:-77156086 Msa0959750:CDS
GAGATACTGCATTATGCTAG+AGG 0.608434 6_3:-77161949 Msa0959750:five_prime_UTR
TGCGAGAAGAAACCGGTGCA+GGG 0.608538 6_3:-77156243 Msa0959750:CDS
TAGTTTGTGAGATTCTGTCC+GGG 0.608647 6_3:+77162035 None:intergenic
GAAGGAGCTAGTTCATTGGT+CGG 0.610923 6_3:-77158623 Msa0959750:five_prime_UTR
GATGCCTCCTGTAAAGAATG+AGG 0.611247 6_3:-77159186 Msa0959750:five_prime_UTR
CACATTATCAAGAATCAGAA+GGG 0.615373 6_3:+77162197 None:intergenic
TTCCCAGTAAAAGCTGCCCC+GGG 0.615600 6_3:+77159155 None:intergenic
ATATGTGTTTGTCTTGGGAG+TGG 0.615821 6_3:+77160645 None:intergenic
TGGATCAACAATCAGAGCAT+CGG 0.615912 6_3:-77160172 Msa0959750:five_prime_UTR
TGAAAGTTTAGCTGTTGAAG+GGG 0.616343 6_3:-77158516 Msa0959750:five_prime_UTR
TGATGAATGGTGGGGCAACA+TGG 0.617347 6_3:+77160672 None:intergenic
CAGTAGATTTGATAAGTCGT+AGG 0.620137 6_3:-77162236 Msa0959750:five_prime_UTR
GAGCTTCTTCGAGCAATCGA+AGG 0.620816 6_3:-77163239 Msa0959750:five_prime_UTR
CAGAGAAATCCGGCCCTGAG+AGG 0.622169 6_3:-77158899 Msa0959750:five_prime_UTR
GGAAAGTAAAATCTATCCAA+CGG 0.624178 6_3:-77159136 Msa0959750:five_prime_UTR
AGAATATTCAGGCATGAAGG+TGG 0.625067 6_3:-77159885 Msa0959750:five_prime_UTR
TTGTGACATTATCTAGCCTG+AGG 0.625311 6_3:-77160506 Msa0959750:five_prime_UTR
AGTTGCGGGTATCGTTGGGT+AGG 0.625399 6_3:-77159860 Msa0959750:five_prime_UTR
TAAGCTGAGGAAGATGGCGA+TGG 0.627679 6_3:-77158749 Msa0959750:five_prime_UTR
TTATCATTGAATCCTCAAGA+AGG 0.628644 6_3:-77158286 Msa0959750:CDS
CATCGTGTATGGTTAGGTGC+AGG 0.630261 6_3:-77162141 Msa0959750:five_prime_UTR
AATTCATGATAGCACTCTCG+GGG 0.633166 6_3:+77159932 None:intergenic
GCGGATGATGAAAGCGACCA+AGG 0.634703 6_3:-77158584 Msa0959750:five_prime_UTR
TTGAGGATTCAATGATAACA+GGG 0.637169 6_3:+77158291 None:intergenic
TCTTCCGGATTTCTTATCAG+CGG 0.637237 6_3:+77156135 None:intergenic
ACGTTGATTACAAAGAAGGA+AGG 0.638116 6_3:-77158641 Msa0959750:five_prime_UTR
AGGGAAGCTCTAAAGCAAGT+GGG 0.639649 6_3:-77162987 Msa0959750:five_prime_UTR
CTGTTGTCAACCGCAAGCAG+AGG 0.641803 6_3:-77159655 Msa0959750:intron
ATTCCAACAAGACTCTCCAA+TGG 0.647060 6_3:-77163021 Msa0959750:five_prime_UTR
GTATATTAATATTATGAACA+AGG 0.647137 6_3:+77163520 None:intergenic
GCATATATTGAAAGAGTATG+GGG 0.648403 6_3:-77162088 Msa0959750:five_prime_UTR
AGAGCAAAGAAAGTGGAGCA+GGG 0.654078 6_3:-77161566 Msa0959750:five_prime_UTR
TCAATTCTACAAGTTCATTG+GGG 0.654382 6_3:+77161204 None:intergenic
TATATTGAAAGAGTATGGGG+TGG 0.655376 6_3:-77162085 Msa0959750:five_prime_UTR
AGGATTTCTACCGTAAGCTG+AGG 0.660330 6_3:-77158762 Msa0959750:five_prime_UTR
AGGTGAATTTGGTACCTCCA+CGG 0.661265 6_3:+77159337 None:intergenic
TGGACAAGAAGTTACGGTGA+AGG 0.662070 6_3:-77159012 Msa0959750:five_prime_UTR
ATCAACAATCAGAGCATCGG+TGG 0.664098 6_3:-77160169 Msa0959750:five_prime_UTR
GGGAAGCTCTAAAGCAAGTG+GGG 0.665829 6_3:-77162986 Msa0959750:five_prime_UTR
GGTTGAATGGAAGAGTGCAT+TGG 0.677619 6_3:-77161875 Msa0959750:five_prime_UTR
CAAAGAAACAGAAGTATCCG+TGG 0.681393 6_3:-77159354 Msa0959750:five_prime_UTR
TGATGAGGAGTGGTCCGAAG+GGG 0.681529 6_3:-77158789 Msa0959750:five_prime_UTR
GTGGGAAGTGATGAATGGTG+GGG 0.695781 6_3:+77160664 None:intergenic
GTGAAGAATGTGATGAGGAG+TGG 0.696151 6_3:-77158799 Msa0959750:five_prime_UTR
TTCGTGCTATAGGAATTTGG+GGG 0.706461 6_3:-77162452 Msa0959750:five_prime_UTR
AAAGGACGTTGCAAGTGTGG+TGG 0.708689 6_3:-77159039 Msa0959750:five_prime_UTR
GTGGTAGCAAAAGGAAGTTG+AGG 0.710047 6_3:+77160427 None:intergenic
CATGGTCCATTTGACAACAG+AGG 0.715233 6_3:+77160690 None:intergenic
GTACGGTGAAGAATGTGATG+AGG 0.733128 6_3:-77158804 Msa0959750:five_prime_UTR
CCAGACGTTCAAAACCTGCG+AGG 0.752155 6_3:-77159217 Msa0959750:five_prime_UTR
AGAAACAGAAGTATCCGTGG+AGG 0.756395 6_3:-77159351 Msa0959750:five_prime_UTR
ATTCATGATAGCACTCTCGG+GGG 0.771405 6_3:+77159933 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTATAGTTTTCAATAAAA+TGG + chr6_3:77158293-77158312 None:intergenic 10.0%
!!! AATATTCTGTAATTTTAAAA+TGG + chr6_3:77159857-77159876 None:intergenic 10.0%
!! GTATATTAATATTATGAACA+AGG + chr6_3:77156237-77156256 None:intergenic 15.0%
!! AATCTATCACTTAAAAAAAA+GGG + chr6_3:77156259-77156278 None:intergenic 15.0%
!!! ATTTTTTTGGTAGAAAATAT+AGG - chr6_3:77156863-77156882 Msa0959750:intron 15.0%
!!! TTTTTTTGGTAGAAAATATA+GGG - chr6_3:77156864-77156883 Msa0959750:intron 15.0%
!! AAGTTTAAAAAGTTTATCAA+TGG + chr6_3:77157129-77157148 None:intergenic 15.0%
!!! ATTACAAAATCATTTACTTT+TGG - chr6_3:77157264-77157283 Msa0959750:intron 15.0%
!! AAAATTTATAGATTACATGA+TGG - chr6_3:77157418-77157437 Msa0959750:intron 15.0%
!! TATGAGTAATTATGAAAATT+TGG - chr6_3:77157777-77157796 Msa0959750:intron 15.0%
!!! AAAAACATTTTAAATTGTTG+TGG - chr6_3:77158036-77158055 Msa0959750:intron 15.0%
!!! TGATAAGCATTTTATTAAAA+TGG + chr6_3:77159691-77159710 None:intergenic 15.0%
!!! TTTTAATAAAATGCTTATCA+CGG - chr6_3:77159691-77159710 Msa0959750:five_prime_UTR 15.0%
!!! TTTAAAATTACAGAATATTC+AGG - chr6_3:77159858-77159877 Msa0959750:five_prime_UTR 15.0%
!! AATTATGGAAATGTTATAAT+GGG + chr6_3:77163102-77163121 None:intergenic 15.0%
!! TAATTATGGAAATGTTATAA+TGG + chr6_3:77163103-77163122 None:intergenic 15.0%
!! AACATATATATAAGTATAGA+GGG + chr6_3:77163179-77163198 None:intergenic 15.0%
!! TAACATATATATAAGTATAG+AGG + chr6_3:77163180-77163199 None:intergenic 15.0%
!! TATATTATCTGAATTATTCT+AGG - chr6_3:77163200-77163219 Msa0959750:five_prime_UTR 15.0%
!! CTTTCTTTACAATAATTGAT+TGG + chr6_3:77156189-77156208 None:intergenic 20.0%
!! GAATCTATCACTTAAAAAAA+AGG + chr6_3:77156260-77156279 None:intergenic 20.0%
!!! TTATAGTTGTCTCATTTTTT+TGG - chr6_3:77156850-77156869 Msa0959750:intron 20.0%
!!! TTTTTTGGTAGAAAATATAG+GGG - chr6_3:77156865-77156884 Msa0959750:intron 20.0%
!!! GATAAACTTTTTAAACTTTC+AGG - chr6_3:77157131-77157150 Msa0959750:intron 20.0%
!! TTCATTCATTTCAAAAGATT+TGG - chr6_3:77157216-77157235 Msa0959750:intron 20.0%
!!! AATGTTTTTAACAATTTTCG+CGG + chr6_3:77158025-77158044 None:intergenic 20.0%
!!! TTTATTTTTTGCAATGCTTT+AGG - chr6_3:77158337-77158356 Msa0959750:CDS 20.0%
!! CTCAACATTATACAAATATA+TGG + chr6_3:77158378-77158397 None:intergenic 20.0%
!! CATATATTTGTATAATGTTG+AGG - chr6_3:77158376-77158395 Msa0959750:five_prime_UTR 20.0%
!!! CAAACGAATTAAGATATTTT+TGG - chr6_3:77158486-77158505 Msa0959750:five_prime_UTR 20.0%
!!! CTAGAAAAGATAATAGATTT+TGG - chr6_3:77158775-77158794 Msa0959750:five_prime_UTR 20.0%
!! CTTGAAAATCTTAATATGAA+TGG - chr6_3:77158955-77158974 Msa0959750:five_prime_UTR 20.0%
!! AATTTGAATCTTATCAAAGT+AGG + chr6_3:77159535-77159554 None:intergenic 20.0%
!! GACAATAACAATAATATCAT+TGG - chr6_3:77159642-77159661 Msa0959750:intron 20.0%
!!! TGTACATTTATGATAATGAA+TGG - chr6_3:77159714-77159733 Msa0959750:five_prime_UTR 20.0%
!!! CATTTTTTCCATTATTTTGT+TGG - chr6_3:77160165-77160184 Msa0959750:five_prime_UTR 20.0%
!!! AGACTGAATTTTATTATTTG+TGG - chr6_3:77160223-77160242 Msa0959750:five_prime_UTR 20.0%
!!! GACTGAATTTTATTATTTGT+GGG - chr6_3:77160224-77160243 Msa0959750:five_prime_UTR 20.0%
!!! ACTGAATTTTATTATTTGTG+GGG - chr6_3:77160225-77160244 Msa0959750:five_prime_UTR 20.0%
!!! TCATATACAACAACATTTTA+AGG - chr6_3:77160312-77160331 Msa0959750:five_prime_UTR 20.0%
!!! TATTTTACATATGGAAATAC+TGG - chr6_3:77161541-77161560 Msa0959750:five_prime_UTR 20.0%
!! AATGGAAAGGAAATATTATT+TGG + chr6_3:77161626-77161645 None:intergenic 20.0%
!!! TAAAACACTAGATTGAATTT+TGG - chr6_3:77161940-77161959 Msa0959750:five_prime_UTR 20.0%
!!! CCTTTAACTGTTTTTTATTA+TGG + chr6_3:77162220-77162239 None:intergenic 20.0%
!! CCATAATAAAAAACAGTTAA+AGG - chr6_3:77162217-77162236 Msa0959750:five_prime_UTR 20.0%
!! ATACATATATTCATACTGTT+TGG - chr6_3:77162392-77162411 Msa0959750:five_prime_UTR 20.0%
!!! ATGTAATGTACCTTTTAAAA+TGG + chr6_3:77162805-77162824 None:intergenic 20.0%
!!! AACTATCGTTTTAATTTTGA+CGG + chr6_3:77162886-77162905 None:intergenic 20.0%
!! CAAGAAAAATTGAGAAAAAA+TGG - chr6_3:77163404-77163423 Msa0959750:five_prime_UTR 20.0%
!! TTTACTAGTGTTACTATATG+TGG + chr6_3:77156083-77156102 None:intergenic 25.0%
!!! ACAATAATTGATTGGTTTAC+TGG + chr6_3:77156181-77156200 None:intergenic 25.0%
! TAAACACTTGTATATTCAGA+TGG - chr6_3:77156301-77156320 Msa0959750:intron 25.0%
!!! CATAATGCCTTTTTTTTCAA+GGG + chr6_3:77156447-77156466 None:intergenic 25.0%
!!! TTGGAATCTTTTTTCATGTT+TGG + chr6_3:77156720-77156739 None:intergenic 25.0%
!!! TTTTTGGTAGAAAATATAGG+GGG - chr6_3:77156866-77156885 Msa0959750:intron 25.0%
!!! TTTGAATTTTGCTTTGAACT+CGG + chr6_3:77156904-77156923 None:intergenic 25.0%
!! TTCATTTCAAAAGATTTGGT+TGG - chr6_3:77157220-77157239 Msa0959750:intron 25.0%
!! TCATTTCAAAAGATTTGGTT+GGG - chr6_3:77157221-77157240 Msa0959750:intron 25.0%
!!! AAATCATTTACTTTTGGACT+CGG - chr6_3:77157270-77157289 Msa0959750:intron 25.0%
!! AGCATATATTGAAAGAGTAT+GGG - chr6_3:77157665-77157684 Msa0959750:intron 25.0%
!!! TTTTGATGGTCTAAATCATA+CGG - chr6_3:77157954-77157973 Msa0959750:intron 25.0%
!!! AACATTGTAGAGTTGTTTTT+TGG + chr6_3:77158220-77158239 None:intergenic 25.0%
! CAATGTTATGAATGAGAAAA+TGG - chr6_3:77158233-77158252 Msa0959750:intron 25.0%
! ATTCGTTTGAAAAACTTGAT+GGG + chr6_3:77158475-77158494 None:intergenic 25.0%
! AATTCGTTTGAAAAACTTGA+TGG + chr6_3:77158476-77158495 None:intergenic 25.0%
!!! ACGAATTAAGATATTTTTGG+TGG - chr6_3:77158489-77158508 Msa0959750:five_prime_UTR 25.0%
!!! CGAATTAAGATATTTTTGGT+GGG - chr6_3:77158490-77158509 Msa0959750:five_prime_UTR 25.0%
! TTCAATTCTACAAGTTCATT+GGG + chr6_3:77158554-77158573 None:intergenic 25.0%
! TTCTCTTATAGTCAAACTAA+TGG - chr6_3:77158677-77158696 Msa0959750:five_prime_UTR 25.0%
!!! TATTATCTTTTCTAGCTTTG+TGG + chr6_3:77158770-77158789 None:intergenic 25.0%
!! AAAGCTTGTTTACTTGAATT+TGG - chr6_3:77158879-77158898 Msa0959750:five_prime_UTR 25.0%
! TATTGGATTGTTAAACACTT+TGG + chr6_3:77158986-77159005 None:intergenic 25.0%
!!! CTCTTTTGATTCAAATGTAT+TGG + chr6_3:77159003-77159022 None:intergenic 25.0%
! CAATACATTTGAATCAAAAG+AGG - chr6_3:77159001-77159020 Msa0959750:five_prime_UTR 25.0%
! CAAAGAAAATAATCTATGCA+AGG + chr6_3:77159145-77159164 None:intergenic 25.0%
! ATGCAATTGAATGTTTACAT+TGG - chr6_3:77159194-77159213 Msa0959750:five_prime_UTR 25.0%
! TGGCTAGAAAGATTAAATTT+AGG - chr6_3:77159214-77159233 Msa0959750:five_prime_UTR 25.0%
! GGCTAGAAAGATTAAATTTA+GGG - chr6_3:77159215-77159234 Msa0959750:five_prime_UTR 25.0%
! GCTAGAAAGATTAAATTTAG+GGG - chr6_3:77159216-77159235 Msa0959750:five_prime_UTR 25.0%
! CTAGAAAGATTAAATTTAGG+GGG - chr6_3:77159217-77159236 Msa0959750:five_prime_UTR 25.0%
! CCAGTTTAAATATACAAGTT+TGG + chr6_3:77159281-77159300 None:intergenic 25.0%
! CCAAACTTGTATATTTAAAC+TGG - chr6_3:77159278-77159297 Msa0959750:five_prime_UTR 25.0%
! AACAAGATGAGAACAAATAT+TGG - chr6_3:77159361-77159380 Msa0959750:five_prime_UTR 25.0%
!! ATTTTCAACTGTCCAAAATT+GGG - chr6_3:77159441-77159460 Msa0959750:intron 25.0%
!! TTGTTATTGTCATGCATAAT+TGG + chr6_3:77159633-77159652 None:intergenic 25.0%
!! AATTTTATTATTTGTGGGGT+GGG - chr6_3:77160229-77160248 Msa0959750:five_prime_UTR 25.0%
!!! GAAATCACAAAATTTGTTGT+AGG - chr6_3:77160913-77160932 Msa0959750:five_prime_UTR 25.0%
!! TATAATGGGAAAATCTTTGT+TGG - chr6_3:77161037-77161056 Msa0959750:intron 25.0%
! CAACAATCATAAACTGATAA+TGG - chr6_3:77161398-77161417 Msa0959750:five_prime_UTR 25.0%
!!! ATCATAAACTGATAATGGAA+AGG - chr6_3:77161403-77161422 Msa0959750:intron 25.0%
!!! CAATCTAGTGTTTTAAATAG+TGG + chr6_3:77161935-77161954 None:intergenic 25.0%
! TACATAAAGATCAAATAGAC+AGG + chr6_3:77162003-77162022 None:intergenic 25.0%
!! TTGCATAAAGTTGATTGATT+GGG + chr6_3:77162074-77162093 None:intergenic 25.0%
!! TTTGCATAAAGTTGATTGAT+TGG + chr6_3:77162075-77162094 None:intergenic 25.0%
! TAAAAAACAGTTAAAGGTGA+AGG - chr6_3:77162223-77162242 Msa0959750:five_prime_UTR 25.0%
! TTGTTCATCAGAATTAGTAA+AGG + chr6_3:77162249-77162268 None:intergenic 25.0%
! TCAAATAAGTCAATCCAAAA+GGG + chr6_3:77162419-77162438 None:intergenic 25.0%
! TTCAAATAAGTCAATCCAAA+AGG + chr6_3:77162420-77162439 None:intergenic 25.0%
! TTATGGAAATAAGCTGAAAA+CGG + chr6_3:77162519-77162538 None:intergenic 25.0%
!!! GAAACTTTGAATTAAGTTGA+AGG + chr6_3:77162663-77162682 None:intergenic 25.0%
!! TGGTTGTTTGTTTAAAATGT+AGG - chr6_3:77162736-77162755 Msa0959750:intron 25.0%
! ATTACATCTTCATTTCATCA+AGG - chr6_3:77162818-77162837 Msa0959750:intron 25.0%
! TACACAATCAATTAATGATC+AGG + chr6_3:77162939-77162958 None:intergenic 25.0%
! TATATATAAGTATAGAGGGA+AGG + chr6_3:77163175-77163194 None:intergenic 25.0%
! ATCACGCGTTGAAATTTTTA+AGG + chr6_3:77156155-77156174 None:intergenic 30.0%
TATACAAGTGTTTAGAGGAT+TGG + chr6_3:77156295-77156314 None:intergenic 30.0%
CTGAATATACAAGTGTTTAG+AGG + chr6_3:77156300-77156319 None:intergenic 30.0%
TTTGATGCCCTTGAAAAAAA+AGG - chr6_3:77156437-77156456 Msa0959750:intron 30.0%
!!! CCATAATGCCTTTTTTTTCA+AGG + chr6_3:77156448-77156467 None:intergenic 30.0%
!! CCTTGAAAAAAAAGGCATTA+TGG - chr6_3:77156445-77156464 Msa0959750:intron 30.0%
GATGACACTAATCTTCAAAA+AGG - chr6_3:77156476-77156495 Msa0959750:intron 30.0%
CTTCAAAAAGGTGAATCTAT+AGG - chr6_3:77156488-77156507 Msa0959750:intron 30.0%
AAAGATTTGTGAATGCGTTA+AGG - chr6_3:77156607-77156626 Msa0959750:intron 30.0%
!!! TCTTTTTTCATGTTTGGCAA+AGG + chr6_3:77156714-77156733 None:intergenic 30.0%
CGCGATAAGTAAGTAAATTA+TGG - chr6_3:77156812-77156831 Msa0959750:intron 30.0%
!! TTGAATTTTGCTTTGAACTC+GGG + chr6_3:77156903-77156922 None:intergenic 30.0%
TAAACTATAGTTTGAACTCC+AGG + chr6_3:77157035-77157054 None:intergenic 30.0%
CAAATCCTATTTCAAACTCT+CGG - chr6_3:77157460-77157479 Msa0959750:intron 30.0%
TGTGATGATTGCATATTTGA+TGG + chr6_3:77157495-77157514 None:intergenic 30.0%
CACATTATCAAGAATCAGAA+GGG + chr6_3:77157560-77157579 None:intergenic 30.0%
GAGCATATATTGAAAGAGTA+TGG - chr6_3:77157664-77157683 Msa0959750:intron 30.0%
! GCATATATTGAAAGAGTATG+GGG - chr6_3:77157666-77157685 Msa0959750:intron 30.0%
ACCATTAGCAATTACAGTAT+TGG - chr6_3:77157831-77157850 Msa0959750:intron 30.0%
CCATTAGCAATTACAGTATT+GGG - chr6_3:77157832-77157851 Msa0959750:intron 30.0%
!!! CACATTGCTTGTTTTTTCAA+CGG - chr6_3:77157994-77158013 Msa0959750:intron 30.0%
TCACTCATAAGCATAGAAAA+TGG - chr6_3:77158099-77158118 Msa0959750:CDS 30.0%
!!! ATTAAGATATTTTTGGTGGG+AGG - chr6_3:77158493-77158512 Msa0959750:five_prime_UTR 30.0%
TCAATTCTACAAGTTCATTG+GGG + chr6_3:77158553-77158572 None:intergenic 30.0%
CTTCAATTCTACAAGTTCAT+TGG + chr6_3:77158555-77158574 None:intergenic 30.0%
ACTTGTAGAATTGAAGTTGA+CGG - chr6_3:77158559-77158578 Msa0959750:five_prime_UTR 30.0%
AGAGCAAGATTAAACAACTA+TGG - chr6_3:77158582-77158601 Msa0959750:five_prime_UTR 30.0%
ACAACTATGGAAAAACAAGA+AGG - chr6_3:77158595-77158614 Msa0959750:five_prime_UTR 30.0%
!!! ACTAATGGCTCTATTTTTGT+TGG - chr6_3:77158692-77158711 Msa0959750:five_prime_UTR 30.0%
! GATTTAGCTTCTCAAGATTT+GGG + chr6_3:77158807-77158826 None:intergenic 30.0%
! AGATTTAGCTTCTCAAGATT+TGG + chr6_3:77158808-77158827 None:intergenic 30.0%
GAAAGGATGTAAAAAACTAG+TGG - chr6_3:77158828-77158847 Msa0959750:five_prime_UTR 30.0%
ATGTAAAAAACTAGTGGAGT+TGG - chr6_3:77158834-77158853 Msa0959750:five_prime_UTR 30.0%
TTTCTTAGAAGTCCAATAGA+TGG + chr6_3:77158862-77158881 None:intergenic 30.0%
AACATACCCAACAACATATT+TGG - chr6_3:77158922-77158941 Msa0959750:five_prime_UTR 30.0%
CTAAGACCAAATATGTTGTT+GGG + chr6_3:77158931-77158950 None:intergenic 30.0%
AACACATATGTGTTTGTCTT+GGG + chr6_3:77159117-77159136 None:intergenic 30.0%
GAAAATAATCTATGCAAGGA+TGG + chr6_3:77159141-77159160 None:intergenic 30.0%
TGTAAACATTCAATTGCATC+AGG + chr6_3:77159193-77159212 None:intergenic 30.0%
AAGATGAGAACAAATATTGG+TGG - chr6_3:77159364-77159383 Msa0959750:five_prime_UTR 30.0%
TGAAGCTGAAAAAATATGAG+TGG - chr6_3:77159403-77159422 Msa0959750:intron 30.0%
GAAGCTGAAAAAATATGAGT+GGG - chr6_3:77159404-77159423 Msa0959750:intron 30.0%
!! AAAAAATATGAGTGGGTTAC+AGG - chr6_3:77159411-77159430 Msa0959750:intron 30.0%
! CATTTTCAACTGTCCAAAAT+TGG - chr6_3:77159440-77159459 Msa0959750:intron 30.0%
ATGGATGATGCAATTCATTA+AGG - chr6_3:77159497-77159516 Msa0959750:intron 30.0%
TCTTATCAAAGTAGGATTGT+TGG + chr6_3:77159527-77159546 None:intergenic 30.0%
AAGATTCAAATTGTTAGTCC+AGG - chr6_3:77159543-77159562 Msa0959750:intron 30.0%
!! TCTCGATGAAAGTATTGTTA+CGG - chr6_3:77159767-77159786 Msa0959750:five_prime_UTR 30.0%
! GAATTTTATTATTTGTGGGG+TGG - chr6_3:77160228-77160247 Msa0959750:five_prime_UTR 30.0%
! ATTTTATTATTTGTGGGGTG+GGG - chr6_3:77160230-77160249 Msa0959750:five_prime_UTR 30.0%
GGAAAGTAAAATCTATCCAA+CGG - chr6_3:77160618-77160637 Msa0959750:five_prime_UTR 30.0%
!! CACAAAATTTGTTGTAGGTT+AGG - chr6_3:77160918-77160937 Msa0959750:five_prime_UTR 30.0%
TATACATACGCACTTATATG+AGG - chr6_3:77161263-77161282 Msa0959750:five_prime_UTR 30.0%
TTGAGGATTCAATGATAACA+GGG + chr6_3:77161466-77161485 None:intergenic 30.0%
TTATCATTGAATCCTCAAGA+AGG - chr6_3:77161468-77161487 Msa0959750:intron 30.0%
CCATATGTAAAATACGAATG+CGG + chr6_3:77161535-77161554 None:intergenic 30.0%
TTCATCTACTTGAAATGGAA+AGG + chr6_3:77161639-77161658 None:intergenic 30.0%
ACATCTTCATCTACTTGAAA+TGG + chr6_3:77161644-77161663 None:intergenic 30.0%
! TTTCAAGTAGATGAAGATGT+TGG - chr6_3:77161644-77161663 Msa0959750:five_prime_UTR 30.0%
TAGCATCAATCTCATTGTTT+CGG + chr6_3:77161678-77161697 None:intergenic 30.0%
GTACAATATCATGCATTATG+TGG + chr6_3:77162030-77162049 None:intergenic 30.0%
TTGATTGATTGGGATCATAT+AGG + chr6_3:77162064-77162083 None:intergenic 30.0%
ACTAATTCTGATGAACAAAC+TGG - chr6_3:77162251-77162270 Msa0959750:five_prime_UTR 30.0%
CAAATAAGTCAATCCAAAAG+GGG + chr6_3:77162418-77162437 None:intergenic 30.0%
AGACTGTTTGGAAGAATTTA+TGG - chr6_3:77162466-77162485 Msa0959750:five_prime_UTR 30.0%
!!! AAGCTTTTTTAGACAGCTTA+TGG + chr6_3:77162536-77162555 None:intergenic 30.0%
TACACATACACACTTATATG+AGG - chr6_3:77162624-77162643 Msa0959750:intron 30.0%
CTTAATTCAAAGTTTCAAGC+AGG - chr6_3:77162667-77162686 Msa0959750:intron 30.0%
ATTTGACACAAACAAGATCA+AGG + chr6_3:77162694-77162713 None:intergenic 30.0%
GTCATTTCTTCATGTCAATT+TGG - chr6_3:77162716-77162735 Msa0959750:intron 30.0%
GTTACATCTAAGTTACATCA+TGG - chr6_3:77162840-77162859 Msa0959750:intron 30.0%
ATCAATTAATGATCAGGACA+AGG + chr6_3:77162933-77162952 None:intergenic 30.0%
CTAAAAACTGTAACAGAAGT+CGG - chr6_3:77162959-77162978 Msa0959750:five_prime_UTR 30.0%
GATAAAGCATGGCATAATTA+TGG + chr6_3:77163117-77163136 None:intergenic 30.0%
TAATTATGCCATGCTTTATC+AGG - chr6_3:77163117-77163136 Msa0959750:five_prime_UTR 30.0%
AATTATGCCATGCTTTATCA+GGG - chr6_3:77163118-77163137 Msa0959750:five_prime_UTR 30.0%
!! AACTTAAAGCGTTGATTTCG+TGG + chr6_3:77156214-77156233 None:intergenic 35.0%
AGTGTTTAGAGGATTGGATA+TGG + chr6_3:77156289-77156308 None:intergenic 35.0%
! TTTACGTTGTGGTCTTTTCA+AGG - chr6_3:77156546-77156565 Msa0959750:intron 35.0%
ATAACATGCCTTCGAATATG+AGG + chr6_3:77156989-77157008 None:intergenic 35.0%
!! TAATCTCTAGAACAAACACC+TGG - chr6_3:77157014-77157033 Msa0959750:intron 35.0%
!! TTTTCAAGCTCTACAGATTG+CGG + chr6_3:77157157-77157176 None:intergenic 35.0%
TGTTCGTGCTATAGGAATTT+GGG - chr6_3:77157300-77157319 Msa0959750:intron 35.0%
! ACCCTTGCTATGGATTTATA+TGG - chr6_3:77157346-77157365 Msa0959750:intron 35.0%
GCCATATAAATCCATAGCAA+GGG + chr6_3:77157350-77157369 None:intergenic 35.0%
CATCAAATCGATGAGAGATT+TGG + chr6_3:77157372-77157391 None:intergenic 35.0%
GCTTACATCATCAATGAAAC+AGG + chr6_3:77157398-77157417 None:intergenic 35.0%
CAGTAGATTTGATAAGTCGT+AGG - chr6_3:77157518-77157537 Msa0959750:intron 35.0%
CCACATTATCAAGAATCAGA+AGG + chr6_3:77157561-77157580 None:intergenic 35.0%
!! CCTTCTGATTCTTGATAATG+TGG - chr6_3:77157558-77157577 Msa0959750:intron 35.0%
TGTGGATCAAGTTCAACAAT+TGG - chr6_3:77157576-77157595 Msa0959750:intron 35.0%
! TATATTGAAAGAGTATGGGG+TGG - chr6_3:77157669-77157688 Msa0959750:intron 35.0%
! ATAGTTTGTGAGATTCTGTC+CGG + chr6_3:77157723-77157742 None:intergenic 35.0%
CCCAATACTGTAATTGCTAA+TGG + chr6_3:77157835-77157854 None:intergenic 35.0%
!! GTATTGGGCTCATTTTTGTT+TGG - chr6_3:77157847-77157866 Msa0959750:intron 35.0%
!! ATTTTTGTTTGGTCGTAGTG+TGG - chr6_3:77157858-77157877 Msa0959750:intron 35.0%
AAGTCCAGATAATGATGTCA+TGG - chr6_3:77157915-77157934 Msa0959750:intron 35.0%
ACATCCATGACATCATTATC+TGG + chr6_3:77157922-77157941 None:intergenic 35.0%
!!! TTGCTTGTTTTTTCAACGGT+TGG - chr6_3:77157998-77158017 Msa0959750:intron 35.0%
TGTGGATTTCATGCTGATAT+TGG - chr6_3:77158054-77158073 Msa0959750:intron 35.0%
CATTCTTTGTTGAAAGAGCT+AGG - chr6_3:77158135-77158154 Msa0959750:intron 35.0%
CAAACAAAGAGCAAAGAAAG+TGG - chr6_3:77158181-77158200 Msa0959750:intron 35.0%
! CTTGATGGCAAATACTTGAA+AGG + chr6_3:77158524-77158543 None:intergenic 35.0%
AGATCCAATGTCCTCAAATT+GGG + chr6_3:77158739-77158758 None:intergenic 35.0%
TAGATCCAATGTCCTCAAAT+TGG + chr6_3:77158740-77158759 None:intergenic 35.0%
CTTGAGAAGCTAAATCTGAA+AGG - chr6_3:77158811-77158830 Msa0959750:five_prime_UTR 35.0%
GCTAAGACCAAATATGTTGT+TGG + chr6_3:77158932-77158951 None:intergenic 35.0%
CAACACATATGTGTTTGTCT+TGG + chr6_3:77159118-77159137 None:intergenic 35.0%
ATGAGAACAAATATTGGTGG+CGG - chr6_3:77159367-77159386 Msa0959750:five_prime_UTR 35.0%
ATACTTTCATCGAGAATTGC+TGG + chr6_3:77159762-77159781 None:intergenic 35.0%
TATCCATAGGTGACTTGATT+TGG + chr6_3:77159793-77159812 None:intergenic 35.0%
AAATTCATGATAGCACTCTC+GGG + chr6_3:77159826-77159845 None:intergenic 35.0%
CAAATTCATGATAGCACTCT+CGG + chr6_3:77159827-77159846 None:intergenic 35.0%
TACAGAATATTCAGGCATGA+AGG - chr6_3:77159866-77159885 Msa0959750:five_prime_UTR 35.0%
! TTGCTAAGTTGAACTCTTGT+AGG + chr6_3:77159929-77159948 None:intergenic 35.0%
GATGAATCACGAAAAATCCT+TGG - chr6_3:77159950-77159969 Msa0959750:five_prime_UTR 35.0%
!! GAAGTAGTTATGACTTGTTC+TGG + chr6_3:77160029-77160048 None:intergenic 35.0%
CACTTCTGCCAACAAAATAA+TGG + chr6_3:77160176-77160195 None:intergenic 35.0%
! TTTTATTATTTGTGGGGTGG+GGG - chr6_3:77160231-77160250 Msa0959750:five_prime_UTR 35.0%
!!! GGGGGTTTTAAATTTGTGTT+AGG - chr6_3:77160249-77160268 Msa0959750:five_prime_UTR 35.0%
!!! GGATGGAGATTTTTTTTCTG+TGG + chr6_3:77160372-77160391 None:intergenic 35.0%
! TTCTGTTTCTTTGGCTGATA+TGG + chr6_3:77160393-77160412 None:intergenic 35.0%
AAATCCTCATTCTTTACAGG+AGG + chr6_3:77160575-77160594 None:intergenic 35.0%
TCCTGTAAAGAATGAGGATT+TGG - chr6_3:77160574-77160593 Msa0959750:five_prime_UTR 35.0%
ACCAAATCCTCATTCTTTAC+AGG + chr6_3:77160578-77160597 None:intergenic 35.0%
GTAAAATCTATCCAACGGTT+TGG - chr6_3:77160623-77160642 Msa0959750:five_prime_UTR 35.0%
!!! TTTGGTGCGTTTGTTGATTT+TGG - chr6_3:77160641-77160660 Msa0959750:five_prime_UTR 35.0%
!!! TGTTGATTTTGGAGCTTTCA+CGG - chr6_3:77160652-77160671 Msa0959750:five_prime_UTR 35.0%
GTTGAGTGATAGCTATGTAA+AGG - chr6_3:77160697-77160716 Msa0959750:five_prime_UTR 35.0%
CCAAACAATACAGAGAAATC+CGG - chr6_3:77160845-77160864 Msa0959750:five_prime_UTR 35.0%
TGTGATTTCCTATCTTTCCT+TGG + chr6_3:77160902-77160921 None:intergenic 35.0%
! GATGGATTCGGGAATATAAT+GGG - chr6_3:77161023-77161042 Msa0959750:five_prime_UTR 35.0%
GGAAAATCTTTGTTGGAGAT+TGG - chr6_3:77161044-77161063 Msa0959750:intron 35.0%
! ACGTTGATTACAAAGAAGGA+AGG - chr6_3:77161113-77161132 Msa0959750:intron 35.0%
!! GACCAAGGAAGTGTTATAAA+TGG - chr6_3:77161185-77161204 Msa0959750:five_prime_UTR 35.0%
CACCATTTATAACACTTCCT+TGG + chr6_3:77161190-77161209 None:intergenic 35.0%
TAAACTTTCAGAAGTCGCTT+CGG + chr6_3:77161228-77161247 None:intergenic 35.0%
TCTGAAAGTTTAGCTGTTGA+AGG - chr6_3:77161236-77161255 Msa0959750:five_prime_UTR 35.0%
CTGAAAGTTTAGCTGTTGAA+GGG - chr6_3:77161237-77161256 Msa0959750:five_prime_UTR 35.0%
TGAAAGTTTAGCTGTTGAAG+GGG - chr6_3:77161238-77161257 Msa0959750:five_prime_UTR 35.0%
! GATGAAAGTGTAACAGAAAG+TGG - chr6_3:77161347-77161366 Msa0959750:five_prime_UTR 35.0%
CTTGAGGATTCAATGATAAC+AGG + chr6_3:77161467-77161486 None:intergenic 35.0%
! CCGCATTCGTATTTTACATA+TGG - chr6_3:77161532-77161551 Msa0959750:five_prime_UTR 35.0%
AGCATCAATCTCATTGTTTC+GGG + chr6_3:77161677-77161696 None:intergenic 35.0%
TTCATATAGCAGCTATAGTG+GGG + chr6_3:77161862-77161881 None:intergenic 35.0%
GTTCATATAGCAGCTATAGT+GGG + chr6_3:77161863-77161882 None:intergenic 35.0%
TGTTCATATAGCAGCTATAG+TGG + chr6_3:77161864-77161883 None:intergenic 35.0%
GATCATATAGGCAATGAAAG+GGG + chr6_3:77162052-77162071 None:intergenic 35.0%
GGATCATATAGGCAATGAAA+GGG + chr6_3:77162053-77162072 None:intergenic 35.0%
CTTTATGCAAACCAAAGCAA+TGG - chr6_3:77162084-77162103 Msa0959750:five_prime_UTR 35.0%
ATGATGTCATTCCATTGCTT+TGG + chr6_3:77162098-77162117 None:intergenic 35.0%
TAAGAACTTGTGAGACTGTT+TGG - chr6_3:77162454-77162473 Msa0959750:five_prime_UTR 35.0%
! TAAGCTGAAAACGGCTTTTA+TGG + chr6_3:77162510-77162529 None:intergenic 35.0%
! AAAATGGTCAGCAAGACTTT+TGG + chr6_3:77162789-77162808 None:intergenic 35.0%
! GTCTTGCTGACCATTTTAAA+AGG - chr6_3:77162792-77162811 Msa0959750:intron 35.0%
AAGTCGGCTAAGAATAAAGT+TGG - chr6_3:77162975-77162994 Msa0959750:five_prime_UTR 35.0%
ATAAGTATAGAGGGAAGGTT+CGG + chr6_3:77163170-77163189 None:intergenic 35.0%
!! TATGAAAGCACCAACACAAA+CGG - chr6_3:77163277-77163296 Msa0959750:five_prime_UTR 35.0%
ATTGTTCAATGTTCTGTTGC+AGG - chr6_3:77163448-77163467 Msa0959750:five_prime_UTR 35.0%
!! AAAGCTCTTTCTGAAACAGA+GGG - chr6_3:77163549-77163568 Msa0959750:five_prime_UTR 35.0%
CAAGCATACCTCAGAAAAAA+GGG - chr6_3:77163588-77163607 Msa0959750:five_prime_UTR 35.0%
!!! ATAAGAGACCCTTTTTTCTG+AGG + chr6_3:77163599-77163618 None:intergenic 35.0%
TTATCCGCTGATAAGAAATC+CGG - chr6_3:77163615-77163634 Msa0959750:five_prime_UTR 35.0%
ATACATCACGATTCAAGCAT+CGG - chr6_3:77163668-77163687 Msa0959750:five_prime_UTR 35.0%
GATGTGTTTGTCACCTTTAG+AGG - chr6_3:77156380-77156399 Msa0959750:intron 40.0%
AGGATCTCAGATTTACGTTG+TGG - chr6_3:77156535-77156554 Msa0959750:intron 40.0%
GGATCAACATCAAGGAAAAC+AGG + chr6_3:77156653-77156672 None:intergenic 40.0%
ATTCCAACAAGACTCTCCAA+TGG - chr6_3:77156733-77156752 Msa0959750:intron 40.0%
GTAGAAAATATAGGGGGTGA+GGG - chr6_3:77156872-77156891 Msa0959750:intron 40.0%
TAGAAAATATAGGGGGTGAG+GGG - chr6_3:77156873-77156892 Msa0959750:intron 40.0%
ACCCAAAACCTCATATTCGA+AGG - chr6_3:77156978-77156997 Msa0959750:intron 40.0%
! GCCTTCGAATATGAGGTTTT+GGG + chr6_3:77156982-77157001 None:intergenic 40.0%
! TGCCTTCGAATATGAGGTTT+TGG + chr6_3:77156983-77157002 None:intergenic 40.0%
!! TTACTTTTGGACTCGGTTGA+TGG - chr6_3:77157277-77157296 Msa0959750:intron 40.0%
GTGTTCGTGCTATAGGAATT+TGG - chr6_3:77157299-77157318 Msa0959750:intron 40.0%
GTTCGTGCTATAGGAATTTG+GGG - chr6_3:77157301-77157320 Msa0959750:intron 40.0%
TTCGTGCTATAGGAATTTGG+GGG - chr6_3:77157302-77157321 Msa0959750:intron 40.0%
GGCCATATAAATCCATAGCA+AGG + chr6_3:77157351-77157370 None:intergenic 40.0%
!! ATTTGCTTTTGTGCATCGAG+TGG + chr6_3:77157445-77157464 None:intergenic 40.0%
! CTATGCCGAGAGTTTGAAAT+AGG + chr6_3:77157468-77157487 None:intergenic 40.0%
TCGTAGGCTACGTTGTAAAA+AGG - chr6_3:77157534-77157553 Msa0959750:intron 40.0%
!! ACAAAGTTCCACTTTTGACC+CGG - chr6_3:77157701-77157720 Msa0959750:intron 40.0%
! TAGTTTGTGAGATTCTGTCC+GGG + chr6_3:77157722-77157741 None:intergenic 40.0%
GAGATACTGCATTATGCTAG+AGG - chr6_3:77157805-77157824 Msa0959750:intron 40.0%
!! GTGCTGCAGTTAAGTTTTGA+TGG - chr6_3:77157940-77157959 Msa0959750:intron 40.0%
TTGCTCATCATATTCTGCTG+TGG - chr6_3:77158434-77158453 Msa0959750:five_prime_UTR 40.0%
TGCTCATCATATTCTGCTGT+GGG - chr6_3:77158435-77158454 Msa0959750:five_prime_UTR 40.0%
TCATTGGGGTGAAAACTTGA+TGG + chr6_3:77158539-77158558 None:intergenic 40.0%
CACAGTATCTTCCCAATTTG+AGG - chr6_3:77158725-77158744 Msa0959750:five_prime_UTR 40.0%
TCTTCCCAATTTGAGGACAT+TGG - chr6_3:77158732-77158751 Msa0959750:five_prime_UTR 40.0%
TATGTGTTTGTCTTGGGAGT+GGG + chr6_3:77159111-77159130 None:intergenic 40.0%
ATATGTGTTTGTCTTGGGAG+TGG + chr6_3:77159112-77159131 None:intergenic 40.0%
TTGTGACATTATCTAGCCTG+AGG - chr6_3:77159248-77159267 Msa0959750:five_prime_UTR 40.0%
! TTCCTTTTGCTACCACCATT+GGG - chr6_3:77159334-77159353 Msa0959750:five_prime_UTR 40.0%
! TGAGAACAAATATTGGTGGC+GGG - chr6_3:77159368-77159387 Msa0959750:five_prime_UTR 40.0%
! GCAGTAGCATGACATTTTCA+TGG - chr6_3:77159478-77159497 Msa0959750:intron 40.0%
CAACTTGGTATTTCACTTCC+TGG + chr6_3:77159564-77159583 None:intergenic 40.0%
CAGGAAGTGAAATACCAAGT+TGG - chr6_3:77159562-77159581 Msa0959750:intron 40.0%
CTCTGATTGTTGATCCAACT+TGG + chr6_3:77159579-77159598 None:intergenic 40.0%
TGGATCAACAATCAGAGCAT+CGG - chr6_3:77159582-77159601 Msa0959750:intron 40.0%
AATTCATGATAGCACTCTCG+GGG + chr6_3:77159825-77159844 None:intergenic 40.0%
!! CGAGAGTGCTATCATGAATT+TGG - chr6_3:77159825-77159844 Msa0959750:five_prime_UTR 40.0%
AGAATATTCAGGCATGAAGG+TGG - chr6_3:77159869-77159888 Msa0959750:five_prime_UTR 40.0%
ATCACGAAAAATCCTTGGCT+CGG - chr6_3:77159955-77159974 Msa0959750:five_prime_UTR 40.0%
TGAAACACAGACACAAACAG+CGG + chr6_3:77160295-77160314 None:intergenic 40.0%
TTCTGTGGATGACATGAATG+CGG + chr6_3:77160357-77160376 None:intergenic 40.0%
GTTTCTTTGGCTGATATGGA+TGG + chr6_3:77160389-77160408 None:intergenic 40.0%
! CACGGATACTTCTGTTTCTT+TGG + chr6_3:77160402-77160421 None:intergenic 40.0%
!! CAAAGAAACAGAAGTATCCG+TGG - chr6_3:77160400-77160419 Msa0959750:five_prime_UTR 40.0%
TCATCTGCAACAGGTGAATT+TGG + chr6_3:77160431-77160450 None:intergenic 40.0%
GTAGAAACTTCATCTGCAAC+AGG + chr6_3:77160440-77160459 None:intergenic 40.0%
CTTGTTCGAACTTCAGCTAA+AGG + chr6_3:77160470-77160489 None:intergenic 40.0%
! AAGAATGAGGATTTGGTTCC+CGG - chr6_3:77160581-77160600 Msa0959750:five_prime_UTR 40.0%
CCGGATTTCTCTGTATTGTT+TGG + chr6_3:77160848-77160867 None:intergenic 40.0%
ATTCTTCGAAATCTGGTCCA+AGG - chr6_3:77160882-77160901 Msa0959750:five_prime_UTR 40.0%
AATCTGGTCCAAGGAAAGAT+AGG - chr6_3:77160891-77160910 Msa0959750:five_prime_UTR 40.0%
! CGATGGATTCGGGAATATAA+TGG - chr6_3:77161022-77161041 Msa0959750:five_prime_UTR 40.0%
CAAGATTTGCGTTTCACAAG+AGG - chr6_3:77161083-77161102 Msa0959750:intron 40.0%
! AGCGACGTTGATTACAAAGA+AGG - chr6_3:77161109-77161128 Msa0959750:intron 40.0%
!! TATAAATGGTGCCACTGAGA+AGG - chr6_3:77161199-77161218 Msa0959750:five_prime_UTR 40.0%
! CAATGTTGAAACTGACTCAC+TGG - chr6_3:77161313-77161332 Msa0959750:five_prime_UTR 40.0%
TTGAATCCTCAAGAAGGAGA+AGG - chr6_3:77161474-77161493 Msa0959750:intron 40.0%
! GAGATTGATGCTAGTTTGAC+TGG - chr6_3:77161685-77161704 Msa0959750:five_prime_UTR 40.0%
! AAGTGATGATTTGTCTCCTG+AGG - chr6_3:77161711-77161730 Msa0959750:five_prime_UTR 40.0%
! AGTGATGATTTGTCTCCTGA+GGG - chr6_3:77161712-77161731 Msa0959750:five_prime_UTR 40.0%
ATTGTCAGGCAAGAAAGGTT+TGG + chr6_3:77161770-77161789 None:intergenic 40.0%
! GATTGACAACACTGATTGTC+AGG + chr6_3:77161784-77161803 None:intergenic 40.0%
TCCCATATCGCAGAAAATAG+CGG - chr6_3:77161802-77161821 Msa0959750:five_prime_UTR 40.0%
!! ACCGCTATTTTCTGCGATAT+GGG + chr6_3:77161806-77161825 None:intergenic 40.0%
!! AACCGCTATTTTCTGCGATA+TGG + chr6_3:77161807-77161826 None:intergenic 40.0%
GTTGTAACACTATGGCATAG+CGG + chr6_3:77161840-77161859 None:intergenic 40.0%
! ATAGTGGGGTTGTAACACTA+TGG + chr6_3:77161848-77161867 None:intergenic 40.0%
GCTATAGTGCTATAGCATAG+TGG + chr6_3:77161911-77161930 None:intergenic 40.0%
GGGATCATATAGGCAATGAA+AGG + chr6_3:77162054-77162073 None:intergenic 40.0%
TCTTCAGTTGTAGGACTATC+AGG + chr6_3:77162193-77162212 None:intergenic 40.0%
! TGAAATCGCAACCTTTTCTC+AGG + chr6_3:77162298-77162317 None:intergenic 40.0%
ACTTATATGAGGAGACTGCA+AGG - chr6_3:77162635-77162654 Msa0959750:intron 40.0%
CTTATATGAGGAGACTGCAA+GGG - chr6_3:77162636-77162655 Msa0959750:intron 40.0%
! TAATGGGCAAAACTACAACG+AGG + chr6_3:77163086-77163105 None:intergenic 40.0%
TAAGTATAGAGGGAAGGTTC+GGG + chr6_3:77163169-77163188 None:intergenic 40.0%
GTCATACACATTCACAGCTT+AGG + chr6_3:77163242-77163261 None:intergenic 40.0%
TGTCAAATGTCCGTTTGTGT+TGG + chr6_3:77163290-77163309 None:intergenic 40.0%
CTGAACATAACCACATGTGT+AGG - chr6_3:77163362-77163381 Msa0959750:five_prime_UTR 40.0%
ACAACTAACACCTACACATG+TGG + chr6_3:77163375-77163394 None:intergenic 40.0%
GTTCTGTTGCAGGAAATCAA+CGG - chr6_3:77163458-77163477 Msa0959750:five_prime_UTR 40.0%
TTGCAGGAAATCAACGGTAA+TGG - chr6_3:77163464-77163483 Msa0959750:five_prime_UTR 40.0%
! GAAATCAACGGTAATGGTCT+CGG - chr6_3:77163470-77163489 Msa0959750:five_prime_UTR 40.0%
!! GAAAGCTCTTTCTGAAACAG+AGG - chr6_3:77163548-77163567 Msa0959750:five_prime_UTR 40.0%
AACAGAGGGTGATCTTGTAA+AGG - chr6_3:77163563-77163582 Msa0959750:five_prime_UTR 40.0%
GCAAGCATACCTCAGAAAAA+AGG - chr6_3:77163587-77163606 Msa0959750:five_prime_UTR 40.0%
TCTTCCGGATTTCTTATCAG+CGG + chr6_3:77163622-77163641 None:intergenic 40.0%
GGAACTATGCTTCCTCAACA+TGG - chr6_3:77156567-77156586 Msa0959750:intron 45.0%
TTCTTGCAAGCACCATGTTG+AGG + chr6_3:77156582-77156601 None:intergenic 45.0%
CCTCAGAAGGATCAACATCA+AGG + chr6_3:77156661-77156680 None:intergenic 45.0%
CCTTGATGTTGATCCTTCTG+AGG - chr6_3:77156658-77156677 Msa0959750:intron 45.0%
! ACACCATTGGAGAGTCTTGT+TGG + chr6_3:77156739-77156758 None:intergenic 45.0%
! ACTCTCCAATGGTGTCAAGA+TGG - chr6_3:77156744-77156763 Msa0959750:intron 45.0%
! TCCAATGGTGTCAAGATGGA+GGG - chr6_3:77156748-77156767 Msa0959750:intron 45.0%
!! AGGGAAGCTCTAAAGCAAGT+GGG - chr6_3:77156767-77156786 Msa0959750:intron 45.0%
AAGCAAGTGGGGAATATCTC+TGG - chr6_3:77156779-77156798 Msa0959750:intron 45.0%
AAGTGGGGAATATCTCTGGT+TGG - chr6_3:77156783-77156802 Msa0959750:intron 45.0%
AGTGGGGAATATCTCTGGTT+GGG - chr6_3:77156784-77156803 Msa0959750:intron 45.0%
GGTAGAAAATATAGGGGGTG+AGG - chr6_3:77156871-77156890 Msa0959750:intron 45.0%
!!! TCAGTCTCGGTGTTTTTGGA+GGG + chr6_3:77156957-77156976 None:intergenic 45.0%
!!! TTCAGTCTCGGTGTTTTTGG+AGG + chr6_3:77156958-77156977 None:intergenic 45.0%
!!! GGTTTCAGTCTCGGTGTTTT+TGG + chr6_3:77156961-77156980 None:intergenic 45.0%
!!! GAGGTTTTGGGTTTCAGTCT+CGG + chr6_3:77156970-77156989 None:intergenic 45.0%
!! GTTGATGGTGTTCGTGCTAT+AGG - chr6_3:77157292-77157311 Msa0959750:intron 45.0%
TGCTATAGGAATTTGGGGGA+TGG - chr6_3:77157306-77157325 Msa0959750:intron 45.0%
GCTATAGGAATTTGGGGGAT+GGG - chr6_3:77157307-77157326 Msa0959750:intron 45.0%
AACTAGCTGTGCATCGTGTA+TGG - chr6_3:77157602-77157621 Msa0959750:intron 45.0%
TTGGTCGTAGTGTGGTTGAA+TGG - chr6_3:77157866-77157885 Msa0959750:intron 45.0%
! GGTTGAATGGAAGAGTGCAT+TGG - chr6_3:77157879-77157898 Msa0959750:intron 45.0%
AAGAGCAAAGAAAGTGGAGC+AGG - chr6_3:77158187-77158206 Msa0959750:intron 45.0%
AGAGCAAAGAAAGTGGAGCA+GGG - chr6_3:77158188-77158207 Msa0959750:intron 45.0%
TTCTGCTGTGGGAATATCTC+AGG - chr6_3:77158446-77158465 Msa0959750:five_prime_UTR 45.0%
GTGGAGTTGGATCCATCTAT+TGG - chr6_3:77158847-77158866 Msa0959750:five_prime_UTR 45.0%
TGACAACAGAGGACGTTGAT+CGG + chr6_3:77159056-77159075 None:intergenic 45.0%
CAACGTCCTCTGTTGTCAAA+TGG - chr6_3:77159058-77159077 Msa0959750:five_prime_UTR 45.0%
CATGGTCCATTTGACAACAG+AGG + chr6_3:77159067-77159086 None:intergenic 45.0%
AGTGGGAAGTGATGAATGGT+GGG + chr6_3:77159094-77159113 None:intergenic 45.0%
CAAGTTTGGTAAGCTTCCTC+AGG + chr6_3:77159267-77159286 None:intergenic 45.0%
!! ACTGGAGCATTGCATGTTGT+TGG - chr6_3:77159296-77159315 Msa0959750:five_prime_UTR 45.0%
GTGGTAGCAAAAGGAAGTTG+AGG + chr6_3:77159330-77159349 None:intergenic 45.0%
! CTTCCTTTTGCTACCACCAT+TGG - chr6_3:77159333-77159352 Msa0959750:five_prime_UTR 45.0%
ACTGTCCAAAATTGGGTGAG+AGG - chr6_3:77159448-77159467 Msa0959750:intron 45.0%
CTGTCCAAAATTGGGTGAGA+GGG - chr6_3:77159449-77159468 Msa0959750:intron 45.0%
! CATTCCCTCTCACCCAATTT+TGG + chr6_3:77159456-77159475 None:intergenic 45.0%
!! ATCAACAATCAGAGCATCGG+TGG - chr6_3:77159585-77159604 Msa0959750:intron 45.0%
GGGGGAAGTAGATTATCCAT+AGG + chr6_3:77159806-77159825 None:intergenic 45.0%
ATTCATGATAGCACTCTCGG+GGG + chr6_3:77159824-77159843 None:intergenic 45.0%
AATCTTGCATTTCCGAGCCA+AGG + chr6_3:77159970-77159989 None:intergenic 45.0%
! GGCTCGGAAATGCAAGATTT+TGG - chr6_3:77159971-77159990 Msa0959750:five_prime_UTR 45.0%
! ACTTGTTCTGGTTGCAGTTG+CGG + chr6_3:77160017-77160036 None:intergenic 45.0%
ATCTTCAGTACCTCTGCTTG+CGG + chr6_3:77160112-77160131 None:intergenic 45.0%
!! AGAAACAGAAGTATCCGTGG+AGG - chr6_3:77160403-77160422 Msa0959750:five_prime_UTR 45.0%
AGGTGAATTTGGTACCTCCA+CGG + chr6_3:77160420-77160439 None:intergenic 45.0%
GCTTTCGTAAAACCAGCGTT+GGG + chr6_3:77160518-77160537 None:intergenic 45.0%
GATGCCTCCTGTAAAGAATG+AGG - chr6_3:77160568-77160587 Msa0959750:five_prime_UTR 45.0%
! AGAATGAGGATTTGGTTCCC+GGG - chr6_3:77160582-77160601 Msa0959750:five_prime_UTR 45.0%
!!! GATTTTGGAGCTTTCACGGA+CGG - chr6_3:77160656-77160675 Msa0959750:five_prime_UTR 45.0%
TGTAAAGGACGTTGCAAGTG+TGG - chr6_3:77160712-77160731 Msa0959750:five_prime_UTR 45.0%
GGCTGTTGGACAAGAAGTTA+CGG - chr6_3:77160736-77160755 Msa0959750:five_prime_UTR 45.0%
TGGACAAGAAGTTACGGTGA+AGG - chr6_3:77160742-77160761 Msa0959750:five_prime_UTR 45.0%
!!! AGCATCAGCTTTTTCACGCA+TGG + chr6_3:77160807-77160826 None:intergenic 45.0%
ATGCGTGAAAAAGCTGATGC+TGG - chr6_3:77160806-77160825 Msa0959750:five_prime_UTR 45.0%
AGGAGGGATTCTTCGAAATC+TGG - chr6_3:77160875-77160894 Msa0959750:five_prime_UTR 45.0%
GTTGTAGGTTAGGAGTTGCA+TGG - chr6_3:77160928-77160947 Msa0959750:five_prime_UTR 45.0%
AGGTTAGGAGTTGCATGGTA+CGG - chr6_3:77160933-77160952 Msa0959750:five_prime_UTR 45.0%
GTACGGTGAAGAATGTGATG+AGG - chr6_3:77160950-77160969 Msa0959750:five_prime_UTR 45.0%
GTGAAGAATGTGATGAGGAG+TGG - chr6_3:77160955-77160974 Msa0959750:five_prime_UTR 45.0%
TAGAAATCCTTCCTCCCCTT+CGG + chr6_3:77160982-77161001 None:intergenic 45.0%
AGGATTTCTACCGTAAGCTG+AGG - chr6_3:77160992-77161011 Msa0959750:five_prime_UTR 45.0%
GAAGGAAGGAGCTAGTTCAT+TGG - chr6_3:77161127-77161146 Msa0959750:intron 45.0%
GAAGGAGCTAGTTCATTGGT+CGG - chr6_3:77161131-77161150 Msa0959750:intron 45.0%
ATCATCCGCAACAGTTGTTG+AGG + chr6_3:77161159-77161178 None:intergenic 45.0%
! AACTGACTCACTGGTTGAAG+TGG - chr6_3:77161322-77161341 Msa0959750:five_prime_UTR 45.0%
GATTCAATGATAACAGGGCC+AGG + chr6_3:77161461-77161480 None:intergenic 45.0%
CAAGAACCTTCTCCTTCTTG+AGG + chr6_3:77161483-77161502 None:intergenic 45.0%
CCTTTATTCAAGCTTCCCTC+AGG + chr6_3:77161730-77161749 None:intergenic 45.0%
CCTGAGGGAAGCTTGAATAA+AGG - chr6_3:77161727-77161746 Msa0959750:five_prime_UTR 45.0%
CAGGCAAGAAAGGTTTGGAA+AGG + chr6_3:77161765-77161784 None:intergenic 45.0%
! CACTGATTGTCAGGCAAGAA+AGG + chr6_3:77161775-77161794 None:intergenic 45.0%
GTTGTAGGACTATCAGGAGA+GGG + chr6_3:77162187-77162206 None:intergenic 45.0%
AGTTGTAGGACTATCAGGAG+AGG + chr6_3:77162188-77162207 None:intergenic 45.0%
TATGGCGCTTCTTCAGTTGT+AGG + chr6_3:77162202-77162221 None:intergenic 45.0%
GGCATTACTGCTTCAGATGA+AGG - chr6_3:77162272-77162291 Msa0959750:five_prime_UTR 45.0%
TCAGATGAAGGCCTGAGAAA+AGG - chr6_3:77162284-77162303 Msa0959750:five_prime_UTR 45.0%
! TCATACTGTTTGGCCCCTTT+TGG - chr6_3:77162402-77162421 Msa0959750:five_prime_UTR 45.0%
CTTAGCACCCTGATAAAGCA+TGG + chr6_3:77163128-77163147 None:intergenic 45.0%
TAACGCTGACATGTCGACAT+TGG - chr6_3:77163316-77163335 Msa0959750:five_prime_UTR 45.0%
TCGCAGTTGCTTAACCAATG+AGG + chr6_3:77163496-77163515 None:intergenic 45.0%
AAGCAACTGCGAGAAGAAAC+CGG - chr6_3:77163504-77163523 Msa0959750:five_prime_UTR 45.0%
CTAGCAGCTGAAGGAAGAAT+TGG - chr6_3:77163642-77163661 Msa0959750:five_prime_UTR 45.0%
GCGAGTGTCTTCACCTCTAA+AGG + chr6_3:77156396-77156415 None:intergenic 50.0%
GAGCTTCTTCGAGCAATCGA+AGG - chr6_3:77156515-77156534 Msa0959750:intron 50.0%
GTTTGCTTTCGCACCTCAGA+AGG + chr6_3:77156674-77156693 None:intergenic 50.0%
! CTCCAATGGTGTCAAGATGG+AGG - chr6_3:77156747-77156766 Msa0959750:intron 50.0%
TCCCTCCATCTTGACACCAT+TGG + chr6_3:77156752-77156771 None:intergenic 50.0%
!! GAGGGAAGCTCTAAAGCAAG+TGG - chr6_3:77156766-77156785 Msa0959750:intron 50.0%
!! GGGAAGCTCTAAAGCAAGTG+GGG - chr6_3:77156768-77156787 Msa0959750:intron 50.0%
ATAGGAATTTGGGGGATGGG+AGG - chr6_3:77157310-77157329 Msa0959750:intron 50.0%
ATTTGGGGGATGGGAGGAAT+AGG - chr6_3:77157316-77157335 Msa0959750:intron 50.0%
TTTGGGGGATGGGAGGAATA+GGG - chr6_3:77157317-77157336 Msa0959750:intron 50.0%
AGGGAAGACAACCCTTGCTA+TGG - chr6_3:77157336-77157355 Msa0959750:intron 50.0%
GCTGTGCATCGTGTATGGTT+AGG - chr6_3:77157607-77157626 Msa0959750:intron 50.0%
CATCGTGTATGGTTAGGTGC+AGG - chr6_3:77157613-77157632 Msa0959750:intron 50.0%
GATTCTGTCCGGGTCAAAAG+TGG + chr6_3:77157712-77157731 None:intergenic 50.0%
AAAGAAAGTGGAGCAGGGTG+TGG - chr6_3:77158193-77158212 Msa0959750:intron 50.0%
GACAACAGAGGACGTTGATC+GGG + chr6_3:77159055-77159074 None:intergenic 50.0%
! TGATGAATGGTGGGGCAACA+TGG + chr6_3:77159085-77159104 None:intergenic 50.0%
GTGGGAAGTGATGAATGGTG+GGG + chr6_3:77159093-77159112 None:intergenic 50.0%
GAGTGGGAAGTGATGAATGG+TGG + chr6_3:77159095-77159114 None:intergenic 50.0%
TGGGAGTGGGAAGTGATGAA+TGG + chr6_3:77159098-77159117 None:intergenic 50.0%
! CTTTTGCTACCACCATTGGG+CGG - chr6_3:77159337-77159356 Msa0959750:five_prime_UTR 50.0%
! TTTTGCTACCACCATTGGGC+GGG - chr6_3:77159338-77159357 Msa0959750:five_prime_UTR 50.0%
CGGCCAAATCAAGTCACCTA+TGG - chr6_3:77159787-77159806 Msa0959750:five_prime_UTR 50.0%
CACAAACAGCGGAAACAGCA+TGG + chr6_3:77160284-77160303 None:intergenic 50.0%
! CGTAAAACCAGCGTTGGGAT+CGG + chr6_3:77160513-77160532 None:intergenic 50.0%
GGCTTTCGTAAAACCAGCGT+TGG + chr6_3:77160519-77160538 None:intergenic 50.0%
! GAATGAGGATTTGGTTCCCG+GGG - chr6_3:77160583-77160602 Msa0959750:five_prime_UTR 50.0%
TTTCCCAGTAAAAGCTGCCC+CGG + chr6_3:77160603-77160622 None:intergenic 50.0%
CAACAAACGCACCAAACCGT+TGG + chr6_3:77160637-77160656 None:intergenic 50.0%
AAAGGACGTTGCAAGTGTGG+TGG - chr6_3:77160715-77160734 Msa0959750:five_prime_UTR 50.0%
TCGAAGAATCCCTCCTCTCA+GGG + chr6_3:77160871-77160890 None:intergenic 50.0%
TTCGAAGAATCCCTCCTCTC+AGG + chr6_3:77160872-77160891 None:intergenic 50.0%
CTACCGTAAGCTGAGGAAGA+TGG - chr6_3:77160999-77161018 Msa0959750:five_prime_UTR 50.0%
TCGCCATCTTCCTCAGCTTA+CGG + chr6_3:77161005-77161024 None:intergenic 50.0%
TAAGCTGAGGAAGATGGCGA+TGG - chr6_3:77161005-77161024 Msa0959750:five_prime_UTR 50.0%
! GAGGAAGATGGCGATGGATT+CGG - chr6_3:77161011-77161030 Msa0959750:five_prime_UTR 50.0%
! AGGAAGATGGCGATGGATTC+GGG - chr6_3:77161012-77161031 Msa0959750:five_prime_UTR 50.0%
CGGTTCCTCAACAACTGTTG+CGG - chr6_3:77161151-77161170 Msa0959750:intron 50.0%
AGAAACCGGTGCAGGGATAA+TGG - chr6_3:77163518-77163537 Msa0959750:five_prime_UTR 50.0%
ACAGTCCATTATCCCTGCAC+CGG + chr6_3:77163526-77163545 None:intergenic 50.0%
!! TCCTTCAGCTGCTAGTCTTC+CGG + chr6_3:77163637-77163656 None:intergenic 50.0%
!!! GTCTCGGTGTTTTTGGAGGG+AGG + chr6_3:77156954-77156973 None:intergenic 55.0%
CGCCCAATGGTGGTAGCAAA+AGG + chr6_3:77159339-77159358 None:intergenic 55.0%
ATCTTGTTCCCGCCCAATGG+TGG + chr6_3:77159349-77159368 None:intergenic 55.0%
CTCATCTTGTTCCCGCCCAA+TGG + chr6_3:77159352-77159371 None:intergenic 55.0%
GGCATGAAGGTGGAGAGTTG+CGG - chr6_3:77159879-77159898 Msa0959750:five_prime_UTR 55.0%
GCATGAAGGTGGAGAGTTGC+GGG - chr6_3:77159880-77159899 Msa0959750:five_prime_UTR 55.0%
! TGGAGAGTTGCGGGTATCGT+TGG - chr6_3:77159889-77159908 Msa0959750:five_prime_UTR 55.0%
! GGAGAGTTGCGGGTATCGTT+GGG - chr6_3:77159890-77159909 Msa0959750:five_prime_UTR 55.0%
! AGTTGCGGGTATCGTTGGGT+AGG - chr6_3:77159894-77159913 Msa0959750:five_prime_UTR 55.0%
CTGTTGTCAACCGCAAGCAG+AGG - chr6_3:77160099-77160118 Msa0959750:five_prime_UTR 55.0%
CTTAAGTCCGATCCCAACGC+TGG - chr6_3:77160503-77160522 Msa0959750:five_prime_UTR 55.0%
!!! CCTCGCAGGTTTTGAACGTC+TGG + chr6_3:77160540-77160559 None:intergenic 55.0%
CCAGACGTTCAAAACCTGCG+AGG - chr6_3:77160537-77160556 Msa0959750:five_prime_UTR 55.0%
! TTCCCGGGGCAGCTTTTACT+GGG - chr6_3:77160597-77160616 Msa0959750:five_prime_UTR 55.0%
TTCCCAGTAAAAGCTGCCCC+GGG + chr6_3:77160602-77160621 None:intergenic 55.0%
GTTGCAAGTGTGGTGGCTGT+TGG - chr6_3:77160722-77160741 Msa0959750:five_prime_UTR 55.0%
TGTGATGAGGAGTGGTCCGA+AGG - chr6_3:77160963-77160982 Msa0959750:five_prime_UTR 55.0%
GTGATGAGGAGTGGTCCGAA+GGG - chr6_3:77160964-77160983 Msa0959750:five_prime_UTR 55.0%
TGATGAGGAGTGGTCCGAAG+GGG - chr6_3:77160965-77160984 Msa0959750:five_prime_UTR 55.0%
GCGGATGATGAAAGCGACCA+AGG - chr6_3:77161170-77161189 Msa0959750:five_prime_UTR 55.0%
CGCTTCGGTTTCCTTCTCAG+TGG + chr6_3:77161213-77161232 None:intergenic 55.0%
GGCTCAACTGTCTCTGTTGC+AGG + chr6_3:77161440-77161459 None:intergenic 55.0%
GCAACAGAGACAGTTGAGCC+TGG - chr6_3:77161440-77161459 Msa0959750:intron 55.0%
! GGTAATGGTCTCGGCCTCAT+TGG - chr6_3:77163479-77163498 Msa0959750:five_prime_UTR 55.0%
TGCGAGAAGAAACCGGTGCA+GGG - chr6_3:77163511-77163530 Msa0959750:five_prime_UTR 55.0%
TCCGGAAGACTAGCAGCTGA+AGG - chr6_3:77163633-77163652 Msa0959750:five_prime_UTR 55.0%
!! GGCATCTCGCTTTTCCTCGC+AGG + chr6_3:77160554-77160573 None:intergenic 60.0%
! GTTCCCGGGGCAGCTTTTAC+TGG - chr6_3:77160596-77160615 Msa0959750:five_prime_UTR 60.0%
CAGAGAAATCCGGCCCTGAG+AGG - chr6_3:77160855-77160874 Msa0959750:five_prime_UTR 60.0%
AGAAATCCGGCCCTGAGAGG+AGG - chr6_3:77160858-77160877 Msa0959750:five_prime_UTR 60.0%
GAAATCCGGCCCTGAGAGGA+GGG - chr6_3:77160859-77160878 Msa0959750:five_prime_UTR 60.0%
AGAATCCCTCCTCTCAGGGC+CGG + chr6_3:77160867-77160886 None:intergenic 60.0%
CTGCGAGAAGAAACCGGTGC+AGG - chr6_3:77163510-77163529 Msa0959750:five_prime_UTR 60.0%
TGAGGAGTGGTCCGAAGGGG+AGG - chr6_3:77160968-77160987 Msa0959750:five_prime_UTR 65.0%
GAGTGGTCCGAAGGGGAGGA+AGG - chr6_3:77160972-77160991 Msa0959750:five_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 77156078 77163698 77156078 ID=Msa0959750;Name=Msa0959750
chr6_3 mRNA 77156078 77163698 77156078 ID=Msa0959750-mRNA-1;Parent=Msa0959750;Name=Msa0959750-mRNA-1;_AED=0.07;_eAED=0.07;_QI=4535|0.83|0.71|1|0.5|0.42|7|0|104
chr6_3 exon 77156078 77156269 77156078 ID=Msa0959750-mRNA-1:exon:13841;Parent=Msa0959750-mRNA-1
chr6_3 exon 77158079 77158122 77158079 ID=Msa0959750-mRNA-1:exon:13840;Parent=Msa0959750-mRNA-1
chr6_3 exon 77158281 77159401 77158281 ID=Msa0959750-mRNA-1:exon:13839;Parent=Msa0959750-mRNA-1
chr6_3 exon 77159656 77161046 77159656 ID=Msa0959750-mRNA-1:exon:13838;Parent=Msa0959750-mRNA-1
chr6_3 exon 77161160 77161417 77161160 ID=Msa0959750-mRNA-1:exon:13837;Parent=Msa0959750-mRNA-1
chr6_3 exon 77161522 77162623 77161522 ID=Msa0959750-mRNA-1:exon:13836;Parent=Msa0959750-mRNA-1
chr6_3 exon 77162957 77163698 77162957 ID=Msa0959750-mRNA-1:exon:13835;Parent=Msa0959750-mRNA-1
chr6_3 five_prime_UTR 77162957 77163698 77162957 ID=Msa0959750-mRNA-1:five_prime_utr;Parent=Msa0959750-mRNA-1
chr6_3 five_prime_UTR 77161522 77162623 77161522 ID=Msa0959750-mRNA-1:five_prime_utr;Parent=Msa0959750-mRNA-1
chr6_3 five_prime_UTR 77161160 77161417 77161160 ID=Msa0959750-mRNA-1:five_prime_utr;Parent=Msa0959750-mRNA-1
chr6_3 five_prime_UTR 77159656 77161046 77159656 ID=Msa0959750-mRNA-1:five_prime_utr;Parent=Msa0959750-mRNA-1
chr6_3 five_prime_UTR 77158360 77159401 77158360 ID=Msa0959750-mRNA-1:five_prime_utr;Parent=Msa0959750-mRNA-1
chr6_3 CDS 77158281 77158359 77158281 ID=Msa0959750-mRNA-1:cds;Parent=Msa0959750-mRNA-1
chr6_3 CDS 77158079 77158122 77158079 ID=Msa0959750-mRNA-1:cds;Parent=Msa0959750-mRNA-1
chr6_3 CDS 77156078 77156269 77156078 ID=Msa0959750-mRNA-1:cds;Parent=Msa0959750-mRNA-1
Gene Sequence

>Msa0959750

ATGGAAAGGAAGAATTTGCACCTGCAACAGAGACAGTTGAGCCTGGCCCTGTTATCATTGAATCCTCAAGAAGGAGAAGATGAAGATGTTGGAGCTGTTCCCGAAACAATGAGATTGATGCTACAACTGCGAGAAGAAACCGGTGCAGGGATAATGGACTGTAAGAAAGCTCTTTCTGAAACAGAGGGTGATCTTGTAAAGGTGCAAGCATACCTCAGAAAAAAGGGTCTCTTATCCGCTGATAAGAAATCCGGAAGACTAGCAGCTGAAGGAAGAATTGGTACATACATCACGATTCAAGCATCGGTGTTCTAA
Protein sequence

>Msa0959750

MERKNLHLQQRQLSLALLSLNPQEGEDEDVGAVPETMRLMLQLREETGAGIMDCKKALSETEGDLVKVQAYLRKKGLLSADKKSGRLAAEGRIGTYITIQASVF*