Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0896160 | XP_003620064.1 | 91.047 | 592 | 3 | 2 | 1 | 546 | 1 | 588 | 0.0 | 1085 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0896160 | sp|Q9ZPS7|TMN3_ARATH | 80.584 | 582 | 63 | 3 | 15 | 546 | 11 | 592 | 0.0 | 931 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0896160 | G7KJN8 | 91.047 | 592 | 3 | 2 | 1 | 546 | 1 | 588 | 0.0 | 1085 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0896160 | Msa0922500 | 0.818618 | 1.784284e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0896160 | MtrunA17_Chr6g0480551 | 91.047 | 592 | 3 | 2 | 1 | 546 | 1 | 588 | 0.0 | 1085 |
| Msa0896160 | MtrunA17_Chr8g0375501 | 80.484 | 579 | 66 | 2 | 15 | 546 | 13 | 591 | 0.0 | 936 |
| Msa0896160 | MtrunA17_Chr5g0434001 | 71.503 | 572 | 115 | 2 | 23 | 546 | 36 | 607 | 0.0 | 842 |
| Msa0896160 | MtrunA17_Chr4g0026371 | 44.133 | 571 | 273 | 4 | 21 | 546 | 20 | 589 | 4.29e-175 | 507 |
| Msa0896160 | MtrunA17_Chr8g0380651 | 35.652 | 575 | 310 | 6 | 25 | 546 | 22 | 589 | 4.59e-121 | 369 |
| Msa0896160 | MtrunA17_Chr2g0277491 | 36.760 | 574 | 303 | 7 | 25 | 546 | 18 | 583 | 1.61e-118 | 362 |
| Msa0896160 | MtrunA17_Chr8g0342031 | 30.573 | 628 | 327 | 10 | 20 | 546 | 29 | 648 | 3.83e-101 | 318 |
| Msa0896160 | MtrunA17_Chr1g0150181 | 28.990 | 614 | 335 | 11 | 28 | 546 | 30 | 637 | 6.97e-91 | 291 |
| Msa0896160 | MtrunA17_Chr3g0136881 | 29.112 | 608 | 330 | 10 | 34 | 546 | 35 | 636 | 9.88e-90 | 288 |
| Msa0896160 | MtrunA17_Chr4g0065301 | 24.375 | 640 | 352 | 15 | 27 | 546 | 29 | 656 | 2.90e-61 | 213 |
| Msa0896160 | MtrunA17_Chr5g0448371 | 25.040 | 631 | 348 | 17 | 32 | 546 | 44 | 665 | 2.45e-55 | 197 |
| Msa0896160 | MtrunA17_Chr3g0120461 | 24.876 | 607 | 334 | 15 | 55 | 546 | 60 | 659 | 4.70e-55 | 196 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0896160 | AT2G01970.1 | 80.584 | 582 | 63 | 3 | 15 | 546 | 11 | 592 | 0.0 | 931 |
| Msa0896160 | AT1G14670.1 | 81.086 | 571 | 61 | 2 | 23 | 546 | 22 | 592 | 0.0 | 900 |
| Msa0896160 | AT5G37310.1 | 76.789 | 573 | 86 | 2 | 21 | 546 | 21 | 593 | 0.0 | 870 |
| Msa0896160 | AT5G37310.2 | 76.789 | 573 | 86 | 2 | 21 | 546 | 21 | 593 | 0.0 | 870 |
| Msa0896160 | AT1G08350.3 | 46.924 | 569 | 254 | 4 | 25 | 546 | 22 | 589 | 0.0 | 552 |
| Msa0896160 | AT1G08350.2 | 46.924 | 569 | 254 | 4 | 25 | 546 | 22 | 589 | 0.0 | 552 |
| Msa0896160 | AT1G08350.1 | 44.794 | 509 | 233 | 4 | 85 | 546 | 1 | 508 | 9.45e-161 | 468 |
| Msa0896160 | AT1G08350.4 | 45.674 | 497 | 223 | 3 | 25 | 474 | 22 | 518 | 9.60e-160 | 466 |
| Msa0896160 | AT1G10950.1 | 35.602 | 573 | 311 | 6 | 25 | 546 | 24 | 589 | 2.20e-118 | 362 |
| Msa0896160 | AT1G55130.1 | 29.700 | 633 | 336 | 10 | 15 | 546 | 13 | 637 | 4.55e-95 | 303 |
| Msa0896160 | AT3G13772.1 | 28.664 | 614 | 333 | 9 | 30 | 546 | 36 | 641 | 1.66e-94 | 301 |
| Msa0896160 | AT2G24170.1 | 29.302 | 645 | 349 | 9 | 1 | 546 | 1 | 637 | 6.31e-94 | 300 |
| Msa0896160 | AT5G10840.1 | 28.780 | 615 | 336 | 10 | 28 | 546 | 40 | 648 | 1.59e-91 | 294 |
| Msa0896160 | AT5G25100.1 | 28.363 | 617 | 338 | 9 | 28 | 546 | 34 | 644 | 3.67e-91 | 293 |
| Msa0896160 | AT5G25100.2 | 28.689 | 610 | 331 | 9 | 35 | 546 | 48 | 651 | 2.70e-90 | 291 |
| Msa0896160 | AT5G35160.2 | 24.012 | 658 | 374 | 16 | 7 | 546 | 9 | 658 | 4.30e-51 | 186 |
| Msa0896160 | AT5G35160.3 | 24.012 | 658 | 374 | 16 | 7 | 546 | 9 | 658 | 4.30e-51 | 186 |
| Msa0896160 | AT5G35160.4 | 24.012 | 658 | 374 | 16 | 7 | 546 | 9 | 658 | 4.30e-51 | 186 |
| Msa0896160 | AT5G35160.1 | 24.121 | 597 | 329 | 14 | 67 | 546 | 41 | 630 | 2.95e-46 | 172 |
| Msa0896160 | AT4G12650.1 | 25.847 | 472 | 278 | 10 | 136 | 546 | 192 | 652 | 9.75e-44 | 165 |
| Msa0896160 | AT2G24170.2 | 23.725 | 451 | 238 | 8 | 1 | 352 | 1 | 444 | 4.17e-37 | 143 |
Find 156 sgRNAs with CRISPR-Local
Find 344 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTATGATGATTTGCCTATT+TGG | 0.197680 | 6_1:+85849237 | Msa0896160:CDS |
| ATTATATATTTGCCAGTGTC+TGG | 0.215685 | 6_1:+85850602 | Msa0896160:CDS |
| TTATGATGATTTGCCTATTT+GGG | 0.236802 | 6_1:+85849238 | Msa0896160:CDS |
| GGTTCATTTGAACGCAATTC+TGG | 0.272718 | 6_1:+85852179 | Msa0896160:three_prime_UTR |
| TCTTATTGTCTTCATTTCAT+AGG | 0.299928 | 6_1:+85851981 | Msa0896160:three_prime_UTR |
| TTGCCTATTTGGGGTTTCAT+AGG | 0.302131 | 6_1:+85849248 | Msa0896160:CDS |
| CTTGTATTGGGAGGGATTGC+TGG | 0.316117 | 6_1:+85850433 | Msa0896160:CDS |
| TACGTCTCCTCTACTTGTAT+TGG | 0.316329 | 6_1:+85850420 | Msa0896160:CDS |
| GTTATATATGCACTCACTTC+AGG | 0.319264 | 6_1:+85850093 | Msa0896160:CDS |
| TCCTCCTTTGCCATGGTATC+GGG | 0.329441 | 6_1:+85850516 | Msa0896160:CDS |
| TTCTTGATGCTTGGAACTGT+TGG | 0.329989 | 6_1:+85851885 | Msa0896160:CDS |
| TTCCTATGCGGTGGTTCAAC+TGG | 0.342782 | 6_1:+85851750 | Msa0896160:CDS |
| TACGGTGTTCATATTCATAT+TGG | 0.349084 | 6_1:+85850014 | Msa0896160:CDS |
| ACGTCTCCTCTACTTGTATT+GGG | 0.350290 | 6_1:+85850421 | Msa0896160:CDS |
| TGTTATAAAATATATCAAAA+TGG | 0.350719 | 6_1:-85849331 | None:intergenic |
| AACCAACCTGGTATACAAAA+TGG | 0.355606 | 6_1:-85848080 | None:intergenic |
| CACCGCTTCAATCTTATGTT+TGG | 0.360697 | 6_1:-85847313 | None:intergenic |
| ACTTGACAAAATCATTCTTA+AGG | 0.370613 | 6_1:-85849613 | None:intergenic |
| GTAACATCCACAAGGGCATT+TGG | 0.374033 | 6_1:-85849389 | None:intergenic |
| ATGCCTCTACTCGCACTTGA+TGG | 0.379315 | 6_1:-85851949 | None:intergenic |
| AAGAAGGCGAGGATGAATAA+TGG | 0.388893 | 6_1:-85847539 | None:intergenic |
| TTGTCGTTATAGTTCTCATA+TGG | 0.395244 | 6_1:+85850389 | Msa0896160:CDS |
| GGAGAAGAAGAGAGAAGAAA+TGG | 0.398416 | 6_1:-85847564 | None:intergenic |
| ATATTCATATTGGCACTTGT+TGG | 0.402301 | 6_1:+85850024 | Msa0896160:CDS |
| TTCCTCCTTTGCCATGGTAT+CGG | 0.402307 | 6_1:+85850515 | Msa0896160:CDS |
| TTCCCTATGAAACCCCAAAT+AGG | 0.409018 | 6_1:-85849251 | None:intergenic |
| ATCCTCGCTACCCCATCATT+TGG | 0.410696 | 6_1:+85849508 | Msa0896160:CDS |
| ACCAGTGGATTTCCAAATGA+TGG | 0.412001 | 6_1:-85849520 | None:intergenic |
| GCACTCACTTCAGGAATTGC+TGG | 0.413621 | 6_1:+85850102 | Msa0896160:CDS |
| GTCAACTGGAAGGAACAAAC+TGG | 0.416389 | 6_1:+85850148 | Msa0896160:CDS |
| TTTGGTTTCTTCTTGATGCT+TGG | 0.416603 | 6_1:+85851876 | Msa0896160:CDS |
| TACATGGCCTGCATATGCTT+TGG | 0.422165 | 6_1:+85851858 | Msa0896160:CDS |
| CACTGGGTGAAGTGTTGAAT+GGG | 0.423169 | 6_1:+85849075 | Msa0896160:CDS |
| TTATATATTTGCCAGTGTCT+GGG | 0.430768 | 6_1:+85850603 | Msa0896160:CDS |
| GAGAGAAGAAATGGAGAAGA+AGG | 0.434131 | 6_1:-85847555 | None:intergenic |
| TATTACCAACCAATCTTCAA+TGG | 0.438341 | 6_1:+85847505 | Msa0896160:exon |
| TCATCTTCGCCATTGAAGAT+TGG | 0.438390 | 6_1:-85847514 | None:intergenic |
| TTTCATAGGGAAGGTTGATA+AGG | 0.446067 | 6_1:+85849262 | Msa0896160:CDS |
| GGATATTTAGTTGTGCGGAC+TGG | 0.447634 | 6_1:-85850484 | None:intergenic |
| GTCACAGTCCTCCTCTTGAC+TGG | 0.456631 | 6_1:+85849563 | Msa0896160:CDS |
| TATATAAGAGAAGCTGGGTT+GGG | 0.458343 | 6_1:+85852046 | Msa0896160:three_prime_UTR |
| GAAATAGAGGCCCACAGAAA+AGG | 0.459642 | 6_1:-85850297 | None:intergenic |
| GTGTACTATATAAGAGAAGC+TGG | 0.466139 | 6_1:+85852040 | Msa0896160:three_prime_UTR |
| AAGCAAAATGTAAGAAATAG+AGG | 0.470399 | 6_1:-85850310 | None:intergenic |
| CCCATCATTTGGAAATCCAC+TGG | 0.476786 | 6_1:+85849519 | Msa0896160:CDS |
| GAAAGAGAAGAAAGAAGCAC+TGG | 0.478603 | 6_1:+85849058 | Msa0896160:CDS |
| ATAGTAGTAATACAGACAAT+AGG | 0.479087 | 6_1:-85851787 | None:intergenic |
| TATGCCCGCTCCGATATGTC+TGG | 0.480652 | 6_1:+85851807 | Msa0896160:CDS |
| TGTGATCTAACAAGTTGCTC+TGG | 0.487264 | 6_1:-85852083 | None:intergenic |
| TACCTCATTCTATTGTCAAC+TGG | 0.491307 | 6_1:+85850134 | Msa0896160:CDS |
| AATAGAGCCCCTCGGTTGTA+CGG | 0.492094 | 6_1:-85850057 | None:intergenic |
| TTGCATGAAACCAGACATAT+CGG | 0.492755 | 6_1:-85851817 | None:intergenic |
| TCAGATAAACGTTACAAAGA+AGG | 0.494228 | 6_1:+85847605 | Msa0896160:CDS |
| CTATATAAGAGAAGCTGGGT+TGG | 0.497740 | 6_1:+85852045 | Msa0896160:three_prime_UTR |
| TAACGACAATTGTGCCGAAT+GGG | 0.498949 | 6_1:-85850375 | None:intergenic |
| TTGTATTGGGAGGGATTGCT+GGG | 0.499754 | 6_1:+85850434 | Msa0896160:CDS |
| AAGTACCTTGGATTATGAAA+AGG | 0.506207 | 6_1:-85847662 | None:intergenic |
| AATTCTGTGGCCCCAGACAC+TGG | 0.506214 | 6_1:-85850614 | None:intergenic |
| TATTTGGGGTTTCATAGGGA+AGG | 0.508176 | 6_1:+85849253 | Msa0896160:CDS |
| CTTCGCCATTGAAGATTGGT+TGG | 0.509181 | 6_1:-85847510 | None:intergenic |
| TGCCTATTTGGGGTTTCATA+GGG | 0.512616 | 6_1:+85849249 | Msa0896160:CDS |
| GCTACTGCCGCTCTCCCATT+CGG | 0.515377 | 6_1:+85850361 | Msa0896160:CDS |
| CCTCTCTTCGCTAACAAAGT+TGG | 0.516706 | 6_1:+85847638 | Msa0896160:CDS |
| CCAGTGGATTTCCAAATGAT+GGG | 0.517728 | 6_1:-85849519 | None:intergenic |
| CAAAATGGATGTGCTTGTAA+AGG | 0.520184 | 6_1:-85849316 | None:intergenic |
| ATAGGGAAGGTTGATAAGGA+GGG | 0.521709 | 6_1:+85849266 | Msa0896160:CDS |
| CTCCTCTACTTGTATTGGGA+GGG | 0.524300 | 6_1:+85850425 | Msa0896160:CDS |
| GGCAAAGGAGGAATCTCCCT+TGG | 0.527338 | 6_1:-85850505 | None:intergenic |
| GACACTTACAAAAGAAGAAG+TGG | 0.527829 | 6_1:+85849169 | Msa0896160:CDS |
| CATGATCTTCAGCAGCAAGC+TGG | 0.529624 | 6_1:-85850720 | None:intergenic |
| AAATGATGGGGTAGCGAGGA+TGG | 0.529947 | 6_1:-85849506 | None:intergenic |
| CCCTTGGATATTTAGTTGTG+CGG | 0.531342 | 6_1:-85850489 | None:intergenic |
| AGTGTTGAATGGGGATAGGT+TGG | 0.533187 | 6_1:+85849085 | Msa0896160:CDS |
| TATGATGATTTGCCTATTTG+GGG | 0.533815 | 6_1:+85849239 | Msa0896160:CDS |
| TTTCTATACTGTGAAATGGA+AGG | 0.537931 | 6_1:+85849439 | Msa0896160:CDS |
| ATTCCTCAGATGGCAATGGC+AGG | 0.540197 | 6_1:+85850544 | Msa0896160:CDS |
| TCGGGGAGCGATTCCTCAGA+TGG | 0.540417 | 6_1:+85850534 | Msa0896160:CDS |
| CATAGGGAAGGTTGATAAGG+AGG | 0.540980 | 6_1:+85849265 | Msa0896160:CDS |
| TAGTTGTGCGGACTGGAGCT+TGG | 0.548078 | 6_1:-85850477 | None:intergenic |
| GCACTGGGTGAAGTGTTGAA+TGG | 0.549117 | 6_1:+85849074 | Msa0896160:CDS |
| AGGTAGTATCTATAATCACT+AGG | 0.554450 | 6_1:-85849296 | None:intergenic |
| TATATATTTGCCAGTGTCTG+GGG | 0.557505 | 6_1:+85850604 | Msa0896160:CDS |
| AAGAAATGGAGAAGAAGGCG+AGG | 0.559753 | 6_1:-85847550 | None:intergenic |
| AAAAGAAGGAAGGTGAAGAT+GGG | 0.560065 | 6_1:-85847356 | None:intergenic |
| TAAGAGAAGCTGGGTTGGGT+GGG | 0.560617 | 6_1:+85852050 | Msa0896160:three_prime_UTR |
| AGGCCCACAGAAAAGGCATC+CGG | 0.561889 | 6_1:-85850290 | None:intergenic |
| GAAGAAACCAAAGCATATGC+AGG | 0.562481 | 6_1:-85851865 | None:intergenic |
| CCCCGATACCATGGCAAAGG+AGG | 0.562801 | 6_1:-85850517 | None:intergenic |
| GAAACCAGACATATCGGAGC+GGG | 0.562807 | 6_1:-85851811 | None:intergenic |
| GGTAGTATCTATAATCACTA+GGG | 0.562961 | 6_1:-85849295 | None:intergenic |
| ATAAGAGAAGCTGGGTTGGG+TGG | 0.563871 | 6_1:+85852049 | Msa0896160:three_prime_UTR |
| CTGAAGATCATGAATGGTGG+TGG | 0.564533 | 6_1:+85850731 | Msa0896160:CDS |
| TACAGATCATTCCTATGCGG+TGG | 0.566423 | 6_1:+85851741 | Msa0896160:intron |
| ATCCCTCCCAATACAAGTAG+AGG | 0.569721 | 6_1:-85850427 | None:intergenic |
| CACTCCCTTCGAGAAGCGGA+TGG | 0.569874 | 6_1:+85849469 | Msa0896160:CDS |
| TTGTCCATCCGCTTCTCGAA+GGG | 0.570473 | 6_1:-85849473 | None:intergenic |
| TCTACTCGCACTTGATGGAT+CGG | 0.570734 | 6_1:-85851944 | None:intergenic |
| GTGAAGTGTTGAATGGGGAT+AGG | 0.575284 | 6_1:+85849081 | Msa0896160:CDS |
| TGTTACTGCTTTCATTACTG+TGG | 0.578518 | 6_1:+85850684 | Msa0896160:CDS |
| AACGGATCCAAATGCCCTTG+TGG | 0.580190 | 6_1:+85849382 | Msa0896160:CDS |
| CTTGTCCATCCGCTTCTCGA+AGG | 0.580261 | 6_1:-85849474 | None:intergenic |
| TTGCTGCTGAAGATCATGAA+TGG | 0.582525 | 6_1:+85850725 | Msa0896160:CDS |
| TTCCAGTTGACAATAGAATG+AGG | 0.583452 | 6_1:-85850136 | None:intergenic |
| AATCCTGCCATTGCCATCTG+AGG | 0.585284 | 6_1:-85850547 | None:intergenic |
| ATCTGACGAATCAGATCTGA+CGG | 0.586173 | 6_1:-85847588 | None:intergenic |
| CCAACTTTGTTAGCGAAGAG+AGG | 0.587195 | 6_1:-85847638 | None:intergenic |
| CTAACACTCCCTTCGAGAAG+CGG | 0.587277 | 6_1:+85849465 | Msa0896160:CDS |
| GGGAGATTCCTCCTTTGCCA+TGG | 0.590122 | 6_1:+85850509 | Msa0896160:CDS |
| TCCGCACAACTAAATATCCA+AGG | 0.591816 | 6_1:+85850488 | Msa0896160:CDS |
| TCTCCTCTACTTGTATTGGG+AGG | 0.599263 | 6_1:+85850424 | Msa0896160:CDS |
| GTTCGGAATCTACTATTGAC+CGG | 0.603844 | 6_1:+85850271 | Msa0896160:CDS |
| ATAACGACAATTGTGCCGAA+TGG | 0.606594 | 6_1:-85850376 | None:intergenic |
| GGAGTGTGTTGATAATAAAG+AGG | 0.610696 | 6_1:-85847382 | None:intergenic |
| TTGATGTGAAAATGAAGAGA+GGG | 0.611255 | 6_1:-85847452 | None:intergenic |
| TTGCAAGAAAACCAGTCAAG+AGG | 0.612188 | 6_1:-85849574 | None:intergenic |
| CCTCCTTTGCCATGGTATCG+GGG | 0.612898 | 6_1:+85850517 | Msa0896160:CDS |
| TTCCAAATGATGGGGTAGCG+AGG | 0.617937 | 6_1:-85849510 | None:intergenic |
| TCGATGTAAATAGCACTGAA+AGG | 0.620759 | 6_1:-85850574 | None:intergenic |
| AATTGATAATCGAAAACCAG+TGG | 0.626537 | 6_1:-85849535 | None:intergenic |
| GCTCCCCGATACCATGGCAA+AGG | 0.627919 | 6_1:-85850520 | None:intergenic |
| TGTACTATATAAGAGAAGCT+GGG | 0.628958 | 6_1:+85852041 | Msa0896160:three_prime_UTR |
| GGAATCGCTCCCCGATACCA+TGG | 0.629968 | 6_1:-85850526 | None:intergenic |
| TCATTCTATTGTCAACTGGA+AGG | 0.630520 | 6_1:+85850138 | Msa0896160:CDS |
| ACTTGATGGATCGGTATATG+TGG | 0.631167 | 6_1:-85851935 | None:intergenic |
| CAAGAAAACCAGTCAAGAGG+AGG | 0.631428 | 6_1:-85849571 | None:intergenic |
| AGCGATTCCTCAGATGGCAA+TGG | 0.634595 | 6_1:+85850540 | Msa0896160:CDS |
| AAGATCATGAATGGTGGTGG+AGG | 0.635786 | 6_1:+85850734 | Msa0896160:CDS |
| TATTGAGATCAATGTGCGAA+CGG | 0.636703 | 6_1:+85849364 | Msa0896160:CDS |
| CACCAAACATAAGATTGAAG+CGG | 0.637337 | 6_1:+85847311 | Msa0896160:five_prime_UTR |
| ATCCAGTTGAACCACCGCAT+AGG | 0.639943 | 6_1:-85851752 | None:intergenic |
| GTGCAGTGAATAGAGCCCCT+CGG | 0.643541 | 6_1:-85850065 | None:intergenic |
| AATTGTGCCGAATGGGAGAG+CGG | 0.644658 | 6_1:-85850368 | None:intergenic |
| GAGTGTGTTGATAATAAAGA+GGG | 0.645942 | 6_1:-85847381 | None:intergenic |
| TAGGGAAGGTTGATAAGGAG+GGG | 0.648260 | 6_1:+85849267 | Msa0896160:CDS |
| TGCCCTTGTGGATGTTACAG+AGG | 0.650587 | 6_1:+85849394 | Msa0896160:CDS |
| GTTGATGTGAAAATGAAGAG+AGG | 0.653670 | 6_1:-85847453 | None:intergenic |
| GATCCATCAAGTGCGAGTAG+AGG | 0.654865 | 6_1:+85851946 | Msa0896160:CDS |
| AAAAGACAAGGACTCTGTGT+CGG | 0.658291 | 6_1:+85849136 | Msa0896160:CDS |
| CTGCTGAAGATCATGAATGG+TGG | 0.659388 | 6_1:+85850728 | Msa0896160:CDS |
| CCGCACAACTAAATATCCAA+GGG | 0.660490 | 6_1:+85850489 | Msa0896160:CDS |
| CAGTGGATTTCCAAATGATG+GGG | 0.661541 | 6_1:-85849518 | None:intergenic |
| TGATGGATCGGTATATGTGG+CGG | 0.664035 | 6_1:-85851932 | None:intergenic |
| TGAAACCAGACATATCGGAG+CGG | 0.664795 | 6_1:-85851812 | None:intergenic |
| TGTCCTCTGTAACATCCACA+AGG | 0.669975 | 6_1:-85849397 | None:intergenic |
| AAAGAGAAGAAAGAAGCACT+GGG | 0.674148 | 6_1:+85849059 | Msa0896160:CDS |
| GGACAAAGAACAATGCTGCA+CGG | 0.675721 | 6_1:-85851911 | None:intergenic |
| TCAACTGGAAGGAACAAACT+GGG | 0.689021 | 6_1:+85850149 | Msa0896160:CDS |
| CCTTACAGATCATTCCTATG+CGG | 0.691017 | 6_1:+85851738 | Msa0896160:intron |
| TGTAGATTGTGTAAATTCTG+TGG | 0.694009 | 6_1:-85850627 | None:intergenic |
| TGATGTGAAAATGAAGAGAG+GGG | 0.697121 | 6_1:-85847451 | None:intergenic |
| GATTGCTGGGAAGAACAGCA+AGG | 0.708765 | 6_1:+85850447 | Msa0896160:CDS |
| GTCCTCTGTAACATCCACAA+GGG | 0.709898 | 6_1:-85849396 | None:intergenic |
| TGACGAATCAGATCTGACGG+TGG | 0.721782 | 6_1:-85847585 | None:intergenic |
| GTAGTAGTCCTTACGAACAG+CGG | 0.726687 | 6_1:-85849204 | None:intergenic |
| GATGTGAAAATGAAGAGAGG+GGG | 0.732700 | 6_1:-85847450 | None:intergenic |
| ACTGGGTGAAGTGTTGAATG+GGG | 0.747764 | 6_1:+85849076 | Msa0896160:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATGTTTAATTTTTAAATCA+TGG | + | chr6_1:85848273-85848292 | Msa0896160:intron | 10.0% |
| !! | TGTTATAAAATATATCAAAA+TGG | - | chr6_1:85849334-85849353 | None:intergenic | 10.0% |
| !!! | TTTTGATATATTTTATAACA+AGG | + | chr6_1:85849334-85849353 | Msa0896160:CDS | 10.0% |
| !!! | ATTCTATCACATTTTTTAAT+TGG | + | chr6_1:85847788-85847807 | Msa0896160:intron | 15.0% |
| !!! | TTCTATCACATTTTTTAATT+GGG | + | chr6_1:85847789-85847808 | Msa0896160:intron | 15.0% |
| !! | TTAGAAAATGAATTAATTGA+AGG | + | chr6_1:85847896-85847915 | Msa0896160:intron | 15.0% |
| !!! | AAGTTTTAATTTTTAAATCG+TGG | + | chr6_1:85848144-85848163 | Msa0896160:intron | 15.0% |
| !!! | TTTTTAAATCATGGTTATTT+AGG | + | chr6_1:85848282-85848301 | Msa0896160:intron | 15.0% |
| !!! | TTTTAAATCATGGTTATTTA+GGG | + | chr6_1:85848283-85848302 | Msa0896160:intron | 15.0% |
| !!! | TTTTCTTATCATTAATATCA+AGG | - | chr6_1:85848490-85848509 | None:intergenic | 15.0% |
| !! | ATTAATGATAAGAAAATCAA+AGG | + | chr6_1:85848494-85848513 | Msa0896160:intron | 15.0% |
| !!! | ATGCAAATGTTTTAAAATAT+CGG | + | chr6_1:85848533-85848552 | Msa0896160:intron | 15.0% |
| !!! | ATTTTGAGATATTTTCTTTT+TGG | + | chr6_1:85848997-85849016 | Msa0896160:intron | 15.0% |
| !!! | TTTTGAGATATTTTCTTTTT+GGG | + | chr6_1:85848998-85849017 | Msa0896160:intron | 15.0% |
| !! | AAAAAAAACACAAATAGAAA+AGG | - | chr6_1:85849645-85849664 | None:intergenic | 15.0% |
| !!! | TTTCTATTTGTGTTTTTTTT+TGG | + | chr6_1:85849645-85849664 | Msa0896160:intron | 15.0% |
| !! | CTTTAATTGAACATATTTAA+TGG | - | chr6_1:85849913-85849932 | None:intergenic | 15.0% |
| !! | TAAGTAGTAAATATGAATTA+TGG | + | chr6_1:85850922-85850941 | Msa0896160:intron | 15.0% |
| !! | ATTTGAACAAAATAATAAAC+TGG | - | chr6_1:85851086-85851105 | None:intergenic | 15.0% |
| !!! | TCTTGAAATACTTTATTTTT+TGG | + | chr6_1:85852157-85852176 | Msa0896160:three_prime_UTR | 15.0% |
| !!! | CTTGAAATACTTTATTTTTT+GGG | + | chr6_1:85852158-85852177 | Msa0896160:three_prime_UTR | 15.0% |
| !! | ATATAAGAAGATGAAAAATG+TGG | - | chr6_1:85847406-85847425 | None:intergenic | 20.0% |
| !! | AATTAGTAATATACAAAGCA+CGG | + | chr6_1:85847829-85847848 | Msa0896160:intron | 20.0% |
| !!! | ATTTTTAAATCGTGGTTATT+CGG | + | chr6_1:85848152-85848171 | Msa0896160:intron | 20.0% |
| !!! | GTTTTAAGTTATAGTTATGT+TGG | + | chr6_1:85848176-85848195 | Msa0896160:intron | 20.0% |
| !! | TCAATTCTTAAATCATGTAA+CGG | - | chr6_1:85848598-85848617 | None:intergenic | 20.0% |
| !! | AAATCATGATGTTAAAACAT+GGG | + | chr6_1:85848652-85848671 | Msa0896160:intron | 20.0% |
| !!! | TTTGAGATATTTTCTTTTTG+GGG | + | chr6_1:85848999-85849018 | Msa0896160:intron | 20.0% |
| !! | AATTAAAGAAAACTCATTTC+AGG | + | chr6_1:85849925-85849944 | Msa0896160:intron | 20.0% |
| !!! | ACTTATAAATCTATGCATTT+TGG | + | chr6_1:85850177-85850196 | Msa0896160:intron | 20.0% |
| !! | AAACAATAAACCATAGAAAT+TGG | - | chr6_1:85850797-85850816 | None:intergenic | 20.0% |
| !!! | TTTTGAAGTGAATTATTTGA+TGG | + | chr6_1:85851143-85851162 | Msa0896160:intron | 20.0% |
| !!! | TGTTTTTTACAAAGTAAACA+TGG | + | chr6_1:85851343-85851362 | Msa0896160:intron | 20.0% |
| !!! | AAATAACTTGTCAAAACATT+AGG | - | chr6_1:85851369-85851388 | None:intergenic | 20.0% |
| !! | CAAGAGTTTAGTTAAAAATA+TGG | - | chr6_1:85852142-85852161 | None:intergenic | 20.0% |
| ! | TAATAAAGAGGGAAAAAAGA+AGG | - | chr6_1:85847373-85847392 | None:intergenic | 25.0% |
| !! | TTTTTAAATCGTGGTTATTC+GGG | + | chr6_1:85848153-85848172 | Msa0896160:intron | 25.0% |
| !! | TGGTTAGTATCATTTTATTG+CGG | + | chr6_1:85848196-85848215 | Msa0896160:intron | 25.0% |
| !!! | AGGGTTTTGATTTTAAATCA+TGG | + | chr6_1:85848302-85848321 | Msa0896160:intron | 25.0% |
| !!! | GGGTTTTGATTTTAAATCAT+GGG | + | chr6_1:85848303-85848322 | Msa0896160:intron | 25.0% |
| !!! | ATGTTTTAAAATATCGGATC+CGG | + | chr6_1:85848539-85848558 | Msa0896160:intron | 25.0% |
| ! | CAAATCATGATGTTAAAACA+TGG | + | chr6_1:85848651-85848670 | Msa0896160:intron | 25.0% |
| ! | CGTAGCTAAATAAAAAAACA+TGG | + | chr6_1:85848818-85848837 | Msa0896160:intron | 25.0% |
| !! | TCAATATTTAACTTTGGAAG+AGG | + | chr6_1:85848954-85848973 | Msa0896160:intron | 25.0% |
| !! | ATTATGATGATTTGCCTATT+TGG | + | chr6_1:85849237-85849256 | Msa0896160:CDS | 25.0% |
| !! | TTATGATGATTTGCCTATTT+GGG | + | chr6_1:85849238-85849257 | Msa0896160:CDS | 25.0% |
| !! | AGTTTTTCTATACTGTGAAA+TGG | + | chr6_1:85849435-85849454 | Msa0896160:CDS | 25.0% |
| ! | ACTTGACAAAATCATTCTTA+AGG | - | chr6_1:85849616-85849635 | None:intergenic | 25.0% |
| ! | AGCAAAAGAATAAATAACAG+AGG | - | chr6_1:85849700-85849719 | None:intergenic | 25.0% |
| ! | AAGCAAAATGTAAGAAATAG+AGG | - | chr6_1:85850313-85850332 | None:intergenic | 25.0% |
| ! | TACTAGTAATACCTAACTAA+GGG | - | chr6_1:85850826-85850845 | None:intergenic | 25.0% |
| ! | AGAATATGAAATTCTTGCTT+AGG | + | chr6_1:85851168-85851187 | Msa0896160:intron | 25.0% |
| ! | GAATATGAAATTCTTGCTTA+GGG | + | chr6_1:85851169-85851188 | Msa0896160:intron | 25.0% |
| ! | AATATGAAATTCTTGCTTAG+GGG | + | chr6_1:85851170-85851189 | Msa0896160:intron | 25.0% |
| !! | GACAAGTTATTTCAAACTTA+AGG | + | chr6_1:85851377-85851396 | Msa0896160:intron | 25.0% |
| ! | ATTAGTAATCTTTACTGTGT+TGG | + | chr6_1:85851405-85851424 | Msa0896160:intron | 25.0% |
| ! | CCAGATATAGAAAACATAAA+TGG | - | chr6_1:85851507-85851526 | None:intergenic | 25.0% |
| !! | CCATTTATGTTTTCTATATC+TGG | + | chr6_1:85851504-85851523 | Msa0896160:intron | 25.0% |
| !! | TGTTTTCTATATCTGGATTT+TGG | + | chr6_1:85851511-85851530 | Msa0896160:intron | 25.0% |
| ! | ATAGTAGTAATACAGACAAT+AGG | - | chr6_1:85851790-85851809 | None:intergenic | 25.0% |
| ! | TCTTATTGTCTTCATTTCAT+AGG | + | chr6_1:85851981-85852000 | Msa0896160:three_prime_UTR | 25.0% |
| !!! | GATCACAAAAGAAACTTTTT+TGG | + | chr6_1:85852099-85852118 | Msa0896160:three_prime_UTR | 25.0% |
| !! | GAGTGTGTTGATAATAAAGA+GGG | - | chr6_1:85847384-85847403 | None:intergenic | 30.0% |
| TTGATGTGAAAATGAAGAGA+GGG | - | chr6_1:85847455-85847474 | None:intergenic | 30.0% | |
| TATTACCAACCAATCTTCAA+TGG | + | chr6_1:85847505-85847524 | Msa0896160:exon | 30.0% | |
| TCAGATAAACGTTACAAAGA+AGG | + | chr6_1:85847605-85847624 | Msa0896160:CDS | 30.0% | |
| AAGTACCTTGGATTATGAAA+AGG | - | chr6_1:85847665-85847684 | None:intergenic | 30.0% | |
| TGCTTCAATTCTCTTATTAG+TGG | + | chr6_1:85848107-85848126 | Msa0896160:intron | 30.0% | |
| ! | TTTTAAATCGTGGTTATTCG+GGG | + | chr6_1:85848154-85848173 | Msa0896160:intron | 30.0% |
| ! | GGTTAGTATCATTTTATTGC+GGG | + | chr6_1:85848197-85848216 | Msa0896160:intron | 30.0% |
| !! | ATGTTGCTATTGTTTTGTTG+CGG | + | chr6_1:85848327-85848346 | Msa0896160:intron | 30.0% |
| CGGAAAATTGTGGTTAAATA+TGG | + | chr6_1:85848347-85848366 | Msa0896160:intron | 30.0% | |
| TTAGCTAACTAAATGGTATC+CGG | - | chr6_1:85848561-85848580 | None:intergenic | 30.0% | |
| AAATAAAGCAAGAGACAAAG+CGG | - | chr6_1:85848772-85848791 | None:intergenic | 30.0% | |
| !! | TTGCTTTATTTGAGAATGAG+TGG | + | chr6_1:85848781-85848800 | Msa0896160:intron | 30.0% |
| TGGTAATTTGGCAAGTAAAT+TGG | - | chr6_1:85848902-85848921 | None:intergenic | 30.0% | |
| GAAAATCAGTTGTGGTAATT+TGG | - | chr6_1:85848914-85848933 | None:intergenic | 30.0% | |
| ACTGATAAGAAAATCAGTTG+TGG | - | chr6_1:85848922-85848941 | None:intergenic | 30.0% | |
| ! | GCTGACTCAATATTTAACTT+TGG | + | chr6_1:85848948-85848967 | Msa0896160:intron | 30.0% |
| ! | TATGATGATTTGCCTATTTG+GGG | + | chr6_1:85849239-85849258 | Msa0896160:CDS | 30.0% |
| GGTAGTATCTATAATCACTA+GGG | - | chr6_1:85849298-85849317 | None:intergenic | 30.0% | |
| AGGTAGTATCTATAATCACT+AGG | - | chr6_1:85849299-85849318 | None:intergenic | 30.0% | |
| TTTCTATACTGTGAAATGGA+AGG | + | chr6_1:85849439-85849458 | Msa0896160:CDS | 30.0% | |
| ! | AATTGATAATCGAAAACCAG+TGG | - | chr6_1:85849538-85849557 | None:intergenic | 30.0% |
| GCAAATACAGATTTGAACTT+GGG | - | chr6_1:85849839-85849858 | None:intergenic | 30.0% | |
| TGCAAATACAGATTTGAACT+TGG | - | chr6_1:85849840-85849859 | None:intergenic | 30.0% | |
| ! | TTTATGCATTTTGTGCAGTA+CGG | + | chr6_1:85849996-85850015 | Msa0896160:intron | 30.0% |
| TACGGTGTTCATATTCATAT+TGG | + | chr6_1:85850014-85850033 | Msa0896160:CDS | 30.0% | |
| ATATTCATATTGGCACTTGT+TGG | + | chr6_1:85850024-85850043 | Msa0896160:CDS | 30.0% | |
| TTGTCGTTATAGTTCTCATA+TGG | + | chr6_1:85850389-85850408 | Msa0896160:CDS | 30.0% | |
| ATTATATATTTGCCAGTGTC+TGG | + | chr6_1:85850602-85850621 | Msa0896160:CDS | 30.0% | |
| TTATATATTTGCCAGTGTCT+GGG | + | chr6_1:85850603-85850622 | Msa0896160:CDS | 30.0% | |
| TGTAGATTGTGTAAATTCTG+TGG | - | chr6_1:85850630-85850649 | None:intergenic | 30.0% | |
| ACTAGTAATACCTAACTAAG+GGG | - | chr6_1:85850825-85850844 | None:intergenic | 30.0% | |
| GTACTAGTAATACCTAACTA+AGG | - | chr6_1:85850827-85850846 | None:intergenic | 30.0% | |
| TGGTTATATCATCAAAGAGA+TGG | - | chr6_1:85850880-85850899 | None:intergenic | 30.0% | |
| CAAGGAAAAATTTGGATTCT+CGG | + | chr6_1:85851540-85851559 | Msa0896160:intron | 30.0% | |
| AAGGAAAAATTTGGATTCTC+GGG | + | chr6_1:85851541-85851560 | Msa0896160:intron | 30.0% | |
| CTTTCATAATGAATCACATG+AGG | + | chr6_1:85851634-85851653 | Msa0896160:intron | 30.0% | |
| !! | ATGCAAACCTCATTTTTCTT+TGG | + | chr6_1:85851834-85851853 | Msa0896160:CDS | 30.0% |
| CATGTATCCAAAGAAAAATG+AGG | - | chr6_1:85851844-85851863 | None:intergenic | 30.0% | |
| !! | CTCATTTTTCTTTGGATACA+TGG | + | chr6_1:85851842-85851861 | Msa0896160:CDS | 30.0% |
| TGTACTATATAAGAGAAGCT+GGG | + | chr6_1:85852041-85852060 | Msa0896160:three_prime_UTR | 30.0% | |
| CACCAAACATAAGATTGAAG+CGG | + | chr6_1:85847311-85847330 | Msa0896160:five_prime_UTR | 35.0% | |
| AAAAGAAGGAAGGTGAAGAT+GGG | - | chr6_1:85847359-85847378 | None:intergenic | 35.0% | |
| AAAAAGAAGGAAGGTGAAGA+TGG | - | chr6_1:85847360-85847379 | None:intergenic | 35.0% | |
| AAAGAGGGAAAAAAGAAGGA+AGG | - | chr6_1:85847369-85847388 | None:intergenic | 35.0% | |
| !! | GGAGTGTGTTGATAATAAAG+AGG | - | chr6_1:85847385-85847404 | None:intergenic | 35.0% |
| GGTTGAATAGAAAAAAGAGG+GGG | - | chr6_1:85847432-85847451 | None:intergenic | 35.0% | |
| GGGTTGAATAGAAAAAAGAG+GGG | - | chr6_1:85847433-85847452 | None:intergenic | 35.0% | |
| GGGGTTGAATAGAAAAAAGA+GGG | - | chr6_1:85847434-85847453 | None:intergenic | 35.0% | |
| TGATGTGAAAATGAAGAGAG+GGG | - | chr6_1:85847454-85847473 | None:intergenic | 35.0% | |
| GTTGATGTGAAAATGAAGAG+AGG | - | chr6_1:85847456-85847475 | None:intergenic | 35.0% | |
| ! | TTGGTCCTTTTCATAATCCA+AGG | + | chr6_1:85847657-85847676 | Msa0896160:CDS | 35.0% |
| TAATATACAAAGCACGGACA+CGG | + | chr6_1:85847835-85847854 | Msa0896160:intron | 35.0% | |
| ! | TGATTTTCAGTGAGACGTAT+CGG | + | chr6_1:85848045-85848064 | Msa0896160:intron | 35.0% |
| AACCAACCTGGTATACAAAA+TGG | - | chr6_1:85848083-85848102 | None:intergenic | 35.0% | |
| TTGAAGCAAAAAAACCAACC+TGG | - | chr6_1:85848095-85848114 | None:intergenic | 35.0% | |
| ! | CATTTTATTGCGGGAAATTG+CGG | + | chr6_1:85848206-85848225 | Msa0896160:intron | 35.0% |
| !! | TGTTTTGTTGCGGAAAATTG+TGG | + | chr6_1:85848337-85848356 | Msa0896160:intron | 35.0% |
| TGATCTTGAACATCACATCA+AGG | - | chr6_1:85848440-85848459 | None:intergenic | 35.0% | |
| GCAGGATTTAGCTAACTAAA+TGG | - | chr6_1:85848568-85848587 | None:intergenic | 35.0% | |
| CGTATTCCAACTTCACATAA+TGG | + | chr6_1:85848624-85848643 | Msa0896160:intron | 35.0% | |
| TGAAGTCCATTATGTGAAGT+TGG | - | chr6_1:85848633-85848652 | None:intergenic | 35.0% | |
| ! | GGATATTTTATGTGGAATCC+CGG | + | chr6_1:85848718-85848737 | Msa0896160:intron | 35.0% |
| ! | GATATTTTATGTGGAATCCC+GGG | + | chr6_1:85848719-85848738 | Msa0896160:intron | 35.0% |
| AATAAAGCAAGAGACAAAGC+GGG | - | chr6_1:85848771-85848790 | None:intergenic | 35.0% | |
| TTAGCTACGTATTAGCATAG+TGG | - | chr6_1:85848807-85848826 | None:intergenic | 35.0% | |
| !! | AAAGAGAAGAAAGAAGCACT+GGG | + | chr6_1:85849059-85849078 | Msa0896160:CDS | 35.0% |
| GACACTTACAAAAGAAGAAG+TGG | + | chr6_1:85849169-85849188 | Msa0896160:CDS | 35.0% | |
| ! | AAGAAGAAGTGGCGAATTTT+CGG | + | chr6_1:85849180-85849199 | Msa0896160:CDS | 35.0% |
| !! | TTTCATAGGGAAGGTTGATA+AGG | + | chr6_1:85849262-85849281 | Msa0896160:CDS | 35.0% |
| CAAAATGGATGTGCTTGTAA+AGG | - | chr6_1:85849319-85849338 | None:intergenic | 35.0% | |
| TATTGAGATCAATGTGCGAA+CGG | + | chr6_1:85849364-85849383 | Msa0896160:CDS | 35.0% | |
| ! | TCCTTGTTTGACTTCTAAAC+AGG | + | chr6_1:85849735-85849754 | Msa0896160:intron | 35.0% |
| ACCTGTTTAGAAGTCAAACA+AGG | - | chr6_1:85849739-85849758 | None:intergenic | 35.0% | |
| ! | TATTTTATCCGTACAACCGA+GGG | + | chr6_1:85850049-85850068 | Msa0896160:CDS | 35.0% |
| GTTATATATGCACTCACTTC+AGG | + | chr6_1:85850093-85850112 | Msa0896160:CDS | 35.0% | |
| TACCTCATTCTATTGTCAAC+TGG | + | chr6_1:85850134-85850153 | Msa0896160:CDS | 35.0% | |
| TTCCAGTTGACAATAGAATG+AGG | - | chr6_1:85850139-85850158 | None:intergenic | 35.0% | |
| TCATTCTATTGTCAACTGGA+AGG | + | chr6_1:85850138-85850157 | Msa0896160:CDS | 35.0% | |
| CATGCAAATCTAACTGATAC+TGG | - | chr6_1:85850204-85850223 | None:intergenic | 35.0% | |
| ! | TCGATGTAAATAGCACTGAA+AGG | - | chr6_1:85850577-85850596 | None:intergenic | 35.0% |
| TATATATTTGCCAGTGTCTG+GGG | + | chr6_1:85850604-85850623 | Msa0896160:CDS | 35.0% | |
| TGTTACTGCTTTCATTACTG+TGG | + | chr6_1:85850684-85850703 | Msa0896160:CDS | 35.0% | |
| CTTTCTTGCACCAATTTCTA+TGG | + | chr6_1:85850784-85850803 | Msa0896160:intron | 35.0% | |
| TGTTTATAGTCCCCTTAGTT+AGG | + | chr6_1:85850812-85850831 | Msa0896160:intron | 35.0% | |
| GAAATCAGTTCACTGCTAAA+TGG | - | chr6_1:85850849-85850868 | None:intergenic | 35.0% | |
| !! | GTGGAAAGTGTTAATGTTAG+AGG | - | chr6_1:85850965-85850984 | None:intergenic | 35.0% |
| ! | TCATCAGAACTCATTTTCAG+TGG | - | chr6_1:85850984-85851003 | None:intergenic | 35.0% |
| CCACAAAGTAATCACTAAAC+AGG | - | chr6_1:85851054-85851073 | None:intergenic | 35.0% | |
| CCTGTTTAGTGATTACTTTG+TGG | + | chr6_1:85851051-85851070 | Msa0896160:intron | 35.0% | |
| ! | CGAGAATCCAAATTTTTCCT+TGG | - | chr6_1:85851542-85851561 | None:intergenic | 35.0% |
| !! | CAATTAAACTCAAAGCATCG+TGG | - | chr6_1:85851677-85851696 | None:intergenic | 35.0% |
| AGCACAAAGTTTAAATGTGC+AGG | - | chr6_1:85851711-85851730 | None:intergenic | 35.0% | |
| TTGCATGAAACCAGACATAT+CGG | - | chr6_1:85851820-85851839 | None:intergenic | 35.0% | |
| ! | TTTGGTTTCTTCTTGATGCT+TGG | + | chr6_1:85851876-85851895 | Msa0896160:CDS | 35.0% |
| GTGTACTATATAAGAGAAGC+TGG | + | chr6_1:85852040-85852059 | Msa0896160:three_prime_UTR | 35.0% | |
| TATATAAGAGAAGCTGGGTT+GGG | + | chr6_1:85852046-85852065 | Msa0896160:three_prime_UTR | 35.0% | |
| CACCGCTTCAATCTTATGTT+TGG | - | chr6_1:85847316-85847335 | None:intergenic | 40.0% | |
| GGGGGTTGAATAGAAAAAAG+AGG | - | chr6_1:85847435-85847454 | None:intergenic | 40.0% | |
| GATGTGAAAATGAAGAGAGG+GGG | - | chr6_1:85847453-85847472 | None:intergenic | 40.0% | |
| TCATCTTCGCCATTGAAGAT+TGG | - | chr6_1:85847517-85847536 | None:intergenic | 40.0% | |
| AAGAAGGCGAGGATGAATAA+TGG | - | chr6_1:85847542-85847561 | None:intergenic | 40.0% | |
| GAGAGAAGAAATGGAGAAGA+AGG | - | chr6_1:85847558-85847577 | None:intergenic | 40.0% | |
| GGAGAAGAAGAGAGAAGAAA+TGG | - | chr6_1:85847567-85847586 | None:intergenic | 40.0% | |
| ATCTGACGAATCAGATCTGA+CGG | - | chr6_1:85847591-85847610 | None:intergenic | 40.0% | |
| GGTAATCAAATGTGTCGTGT+CGG | + | chr6_1:85847917-85847936 | Msa0896160:intron | 40.0% | |
| !!! | GATCTGCCATTTTGTATACC+AGG | + | chr6_1:85848074-85848093 | Msa0896160:CDS | 40.0% |
| !!! | TGCCATTTTGTATACCAGGT+TGG | + | chr6_1:85848078-85848097 | Msa0896160:intron | 40.0% |
| GGGAAATTGCGGTTAAATAC+AGG | + | chr6_1:85848217-85848236 | Msa0896160:intron | 40.0% | |
| TGCTGATGCAATTGTAGTTG+TGG | + | chr6_1:85848374-85848393 | Msa0896160:intron | 40.0% | |
| TTGTAGTTGTGGAGACATCA+TGG | + | chr6_1:85848385-85848404 | Msa0896160:intron | 40.0% | |
| TCATGTAACGGTGTAAATGC+AGG | - | chr6_1:85848586-85848605 | None:intergenic | 40.0% | |
| ! | GGCTGTGAGGATATTTTATG+TGG | + | chr6_1:85848710-85848729 | Msa0896160:intron | 40.0% |
| ATAAAGCAAGAGACAAAGCG+GGG | - | chr6_1:85848770-85848789 | None:intergenic | 40.0% | |
| CTAGACCATCCAATCTTGAT+CGG | - | chr6_1:85848849-85848868 | None:intergenic | 40.0% | |
| ! | TTTGGCAAGTAAATTGGCTC+CGG | - | chr6_1:85848896-85848915 | None:intergenic | 40.0% |
| ! | GAAAGAGAAGAAAGAAGCAC+TGG | + | chr6_1:85849058-85849077 | Msa0896160:CDS | 40.0% |
| !!! | TTTTGGAACTCGAGCTGATA+AGG | - | chr6_1:85849119-85849138 | None:intergenic | 40.0% |
| ! | ACACAGAGTCCTTGTCTTTT+TGG | - | chr6_1:85849136-85849155 | None:intergenic | 40.0% |
| AAAAGACAAGGACTCTGTGT+CGG | + | chr6_1:85849136-85849155 | Msa0896160:CDS | 40.0% | |
| ! | TTGCCTATTTGGGGTTTCAT+AGG | + | chr6_1:85849248-85849267 | Msa0896160:CDS | 40.0% |
| ! | TGCCTATTTGGGGTTTCATA+GGG | + | chr6_1:85849249-85849268 | Msa0896160:CDS | 40.0% |
| TTCCCTATGAAACCCCAAAT+AGG | - | chr6_1:85849254-85849273 | None:intergenic | 40.0% | |
| ! | TATTTGGGGTTTCATAGGGA+AGG | + | chr6_1:85849253-85849272 | Msa0896160:CDS | 40.0% |
| !! | ATAGGGAAGGTTGATAAGGA+GGG | + | chr6_1:85849266-85849285 | Msa0896160:CDS | 40.0% |
| ! | CAGTGGATTTCCAAATGATG+GGG | - | chr6_1:85849521-85849540 | None:intergenic | 40.0% |
| ! | CCAGTGGATTTCCAAATGAT+GGG | - | chr6_1:85849522-85849541 | None:intergenic | 40.0% |
| ! | ACCAGTGGATTTCCAAATGA+TGG | - | chr6_1:85849523-85849542 | None:intergenic | 40.0% |
| TTGCAAGAAAACCAGTCAAG+AGG | - | chr6_1:85849577-85849596 | None:intergenic | 40.0% | |
| AAACAGGTATGCACATGATG+AGG | + | chr6_1:85849751-85849770 | Msa0896160:intron | 40.0% | |
| ! | ACATCCACGGTGATGTTTTT+AGG | + | chr6_1:85849810-85849829 | Msa0896160:intron | 40.0% |
| GAAACCTAAAAACATCACCG+TGG | - | chr6_1:85849817-85849836 | None:intergenic | 40.0% | |
| AACTCACAGGGTAAACAGTT+GGG | - | chr6_1:85849882-85849901 | None:intergenic | 40.0% | |
| AAACTCACAGGGTAAACAGT+TGG | - | chr6_1:85849883-85849902 | None:intergenic | 40.0% | |
| TTTACCCTGTGAGTTTCTTC+TGG | + | chr6_1:85849887-85849906 | Msa0896160:intron | 40.0% | |
| ! | GTATTTTATCCGTACAACCG+AGG | + | chr6_1:85850048-85850067 | Msa0896160:CDS | 40.0% |
| ! | ATTTTATCCGTACAACCGAG+GGG | + | chr6_1:85850050-85850069 | Msa0896160:CDS | 40.0% |
| TCAACTGGAAGGAACAAACT+GGG | + | chr6_1:85850149-85850168 | Msa0896160:CDS | 40.0% | |
| CTTTGTCCGTTTATCATGAC+AGG | + | chr6_1:85850249-85850268 | Msa0896160:intron | 40.0% | |
| TCCGTTTATCATGACAGGTT+CGG | + | chr6_1:85850254-85850273 | Msa0896160:intron | 40.0% | |
| TCCGAACCTGTCATGATAAA+CGG | - | chr6_1:85850258-85850277 | None:intergenic | 40.0% | |
| GTTCGGAATCTACTATTGAC+CGG | + | chr6_1:85850271-85850290 | Msa0896160:CDS | 40.0% | |
| TAACGACAATTGTGCCGAAT+GGG | - | chr6_1:85850378-85850397 | None:intergenic | 40.0% | |
| ATAACGACAATTGTGCCGAA+TGG | - | chr6_1:85850379-85850398 | None:intergenic | 40.0% | |
| TACGTCTCCTCTACTTGTAT+TGG | + | chr6_1:85850420-85850439 | Msa0896160:CDS | 40.0% | |
| ACGTCTCCTCTACTTGTATT+GGG | + | chr6_1:85850421-85850440 | Msa0896160:CDS | 40.0% | |
| TCCGCACAACTAAATATCCA+AGG | + | chr6_1:85850488-85850507 | Msa0896160:CDS | 40.0% | |
| CCCTTGGATATTTAGTTGTG+CGG | - | chr6_1:85850492-85850511 | None:intergenic | 40.0% | |
| CCGCACAACTAAATATCCAA+GGG | + | chr6_1:85850489-85850508 | Msa0896160:CDS | 40.0% | |
| TTGCTGCTGAAGATCATGAA+TGG | + | chr6_1:85850725-85850744 | Msa0896160:CDS | 40.0% | |
| CCAACATCGATCAACTACAT+TGG | - | chr6_1:85850900-85850919 | None:intergenic | 40.0% | |
| CCAATGTAGTTGATCGATGT+TGG | + | chr6_1:85850897-85850916 | Msa0896160:intron | 40.0% | |
| GCTTAGGGGTGATGTATTTA+TGG | + | chr6_1:85851184-85851203 | Msa0896160:intron | 40.0% | |
| ATGCATACAATTGTTCCTGC+AGG | + | chr6_1:85851252-85851271 | Msa0896160:intron | 40.0% | |
| ACGACTCTAACTCATGAACA+AGG | + | chr6_1:85851458-85851477 | Msa0896160:intron | 40.0% | |
| CGACTCTAACTCATGAACAA+GGG | + | chr6_1:85851459-85851478 | Msa0896160:intron | 40.0% | |
| GGGAAACATTCTTGCTTTCA+TGG | + | chr6_1:85851479-85851498 | Msa0896160:intron | 40.0% | |
| GGTGCAACCAAGGAAAAATT+TGG | + | chr6_1:85851532-85851551 | Msa0896160:intron | 40.0% | |
| CCTTACAGATCATTCCTATG+CGG | + | chr6_1:85851738-85851757 | Msa0896160:intron | 40.0% | |
| GAAGAAACCAAAGCATATGC+AGG | - | chr6_1:85851868-85851887 | None:intergenic | 40.0% | |
| TTCTTGATGCTTGGAACTGT+TGG | + | chr6_1:85851885-85851904 | Msa0896160:CDS | 40.0% | |
| ! | ACTTGATGGATCGGTATATG+TGG | - | chr6_1:85851938-85851957 | None:intergenic | 40.0% |
| CTATATAAGAGAAGCTGGGT+TGG | + | chr6_1:85852045-85852064 | Msa0896160:three_prime_UTR | 40.0% | |
| TGTGATCTAACAAGTTGCTC+TGG | - | chr6_1:85852086-85852105 | None:intergenic | 40.0% | |
| GGTTCATTTGAACGCAATTC+TGG | + | chr6_1:85852179-85852198 | Msa0896160:three_prime_UTR | 40.0% | |
| CTTCGCCATTGAAGATTGGT+TGG | - | chr6_1:85847513-85847532 | None:intergenic | 45.0% | |
| AAGAAATGGAGAAGAAGGCG+AGG | - | chr6_1:85847553-85847572 | None:intergenic | 45.0% | |
| CCAACTTTGTTAGCGAAGAG+AGG | - | chr6_1:85847641-85847660 | None:intergenic | 45.0% | |
| CCTCTCTTCGCTAACAAAGT+TGG | + | chr6_1:85847638-85847657 | Msa0896160:CDS | 45.0% | |
| !! | AACGGATCGAAGAAGTACCT+TGG | - | chr6_1:85847677-85847696 | None:intergenic | 45.0% |
| CGTGGAATGCACGTGAATAA+CGG | - | chr6_1:85847695-85847714 | None:intergenic | 45.0% | |
| ACAAAAACAGATCCAGCACG+TGG | - | chr6_1:85847713-85847732 | None:intergenic | 45.0% | |
| ! | CATCTGATCAAAGGCGTATC+CGG | - | chr6_1:85847952-85847971 | None:intergenic | 45.0% |
| ACGCCTTTGATCAGATGTGT+CGG | + | chr6_1:85847955-85847974 | Msa0896160:intron | 45.0% | |
| ACACCGACACATCTGATCAA+AGG | - | chr6_1:85847961-85847980 | None:intergenic | 45.0% | |
| ACTGTTGCATCCTAGTGGTT+TGG | + | chr6_1:85848689-85848708 | Msa0896160:intron | 45.0% | |
| TAAAGCAAGAGACAAAGCGG+GGG | - | chr6_1:85848769-85848788 | None:intergenic | 45.0% | |
| ATGGACCATCCGATCAAGAT+TGG | + | chr6_1:85848837-85848856 | Msa0896160:intron | 45.0% | |
| ACCATCCGATCAAGATTGGA+TGG | + | chr6_1:85848841-85848860 | Msa0896160:intron | 45.0% | |
| ACCATCCAATCTTGATCGGA+TGG | - | chr6_1:85848845-85848864 | None:intergenic | 45.0% | |
| !! | CACTGGGTGAAGTGTTGAAT+GGG | + | chr6_1:85849075-85849094 | Msa0896160:CDS | 45.0% |
| !! | ACTGGGTGAAGTGTTGAATG+GGG | + | chr6_1:85849076-85849095 | Msa0896160:CDS | 45.0% |
| !! | GTGAAGTGTTGAATGGGGAT+AGG | + | chr6_1:85849081-85849100 | Msa0896160:CDS | 45.0% |
| ! | AGTGTTGAATGGGGATAGGT+TGG | + | chr6_1:85849085-85849104 | Msa0896160:CDS | 45.0% |
| GCTCGAGTTCCAAAAAGACA+AGG | + | chr6_1:85849124-85849143 | Msa0896160:CDS | 45.0% | |
| GTAGTAGTCCTTACGAACAG+CGG | - | chr6_1:85849207-85849226 | None:intergenic | 45.0% | |
| !! | CATAGGGAAGGTTGATAAGG+AGG | + | chr6_1:85849265-85849284 | Msa0896160:CDS | 45.0% |
| !! | TAGGGAAGGTTGATAAGGAG+GGG | + | chr6_1:85849267-85849286 | Msa0896160:CDS | 45.0% |
| !! | GTAACATCCACAAGGGCATT+TGG | - | chr6_1:85849392-85849411 | None:intergenic | 45.0% |
| GTCCTCTGTAACATCCACAA+GGG | - | chr6_1:85849399-85849418 | None:intergenic | 45.0% | |
| TGTCCTCTGTAACATCCACA+AGG | - | chr6_1:85849400-85849419 | None:intergenic | 45.0% | |
| CCCATCATTTGGAAATCCAC+TGG | + | chr6_1:85849519-85849538 | Msa0896160:CDS | 45.0% | |
| CAAGAAAACCAGTCAAGAGG+AGG | - | chr6_1:85849574-85849593 | None:intergenic | 45.0% | |
| ACTGGCTGGAAATACATCCA+CGG | + | chr6_1:85849797-85849816 | Msa0896160:intron | 45.0% | |
| TCTGTATTTGCAGCAGCTCT+TGG | + | chr6_1:85849848-85849867 | Msa0896160:intron | 45.0% | |
| ATGGCCAGAAGAAACTCACA+GGG | - | chr6_1:85849894-85849913 | None:intergenic | 45.0% | |
| AATGGCCAGAAGAAACTCAC+AGG | - | chr6_1:85849895-85849914 | None:intergenic | 45.0% | |
| GTCAACTGGAAGGAACAAAC+TGG | + | chr6_1:85850148-85850167 | Msa0896160:CDS | 45.0% | |
| GAAATAGAGGCCCACAGAAA+AGG | - | chr6_1:85850300-85850319 | None:intergenic | 45.0% | |
| TCTCCTCTACTTGTATTGGG+AGG | + | chr6_1:85850424-85850443 | Msa0896160:CDS | 45.0% | |
| CTCCTCTACTTGTATTGGGA+GGG | + | chr6_1:85850425-85850444 | Msa0896160:CDS | 45.0% | |
| ATCCCTCCCAATACAAGTAG+AGG | - | chr6_1:85850430-85850449 | None:intergenic | 45.0% | |
| TTGTATTGGGAGGGATTGCT+GGG | + | chr6_1:85850434-85850453 | Msa0896160:CDS | 45.0% | |
| GGATATTTAGTTGTGCGGAC+TGG | - | chr6_1:85850487-85850506 | None:intergenic | 45.0% | |
| TTCCTCCTTTGCCATGGTAT+CGG | + | chr6_1:85850515-85850534 | Msa0896160:CDS | 45.0% | |
| CTGCTGAAGATCATGAATGG+TGG | + | chr6_1:85850728-85850747 | Msa0896160:CDS | 45.0% | |
| CTGAAGATCATGAATGGTGG+TGG | + | chr6_1:85850731-85850750 | Msa0896160:CDS | 45.0% | |
| !! | AAGATCATGAATGGTGGTGG+AGG | + | chr6_1:85850734-85850753 | Msa0896160:CDS | 45.0% |
| !! | TCTGGATTTTGGTGCAACCA+AGG | + | chr6_1:85851522-85851541 | Msa0896160:intron | 45.0% |
| CCGCATAGGAATGATCTGTA+AGG | - | chr6_1:85851741-85851760 | None:intergenic | 45.0% | |
| TACAGATCATTCCTATGCGG+TGG | + | chr6_1:85851741-85851760 | Msa0896160:intron | 45.0% | |
| TGAAACCAGACATATCGGAG+CGG | - | chr6_1:85851815-85851834 | None:intergenic | 45.0% | |
| TACATGGCCTGCATATGCTT+TGG | + | chr6_1:85851858-85851877 | Msa0896160:CDS | 45.0% | |
| GGACAAAGAACAATGCTGCA+CGG | - | chr6_1:85851914-85851933 | None:intergenic | 45.0% | |
| ! | TGATGGATCGGTATATGTGG+CGG | - | chr6_1:85851935-85851954 | None:intergenic | 45.0% |
| ! | TCTACTCGCACTTGATGGAT+CGG | - | chr6_1:85851947-85851966 | None:intergenic | 45.0% |
| TGACGAATCAGATCTGACGG+TGG | - | chr6_1:85847588-85847607 | None:intergenic | 50.0% | |
| ! | ATCAAAGGCGTATCCGGTGT+TGG | - | chr6_1:85847946-85847965 | None:intergenic | 50.0% |
| TCCTCACTGTTGCATCCTAG+TGG | + | chr6_1:85848684-85848703 | Msa0896160:intron | 50.0% | |
| ACCACTAGGATGCAACAGTG+AGG | - | chr6_1:85848688-85848707 | None:intergenic | 50.0% | |
| ! | ATCCTAGTGGTTTGGCTGTG+AGG | + | chr6_1:85848697-85848716 | Msa0896160:intron | 50.0% |
| ATCCTCACAGCCAAACCACT+AGG | - | chr6_1:85848702-85848721 | None:intergenic | 50.0% | |
| AAAGCAAGAGACAAAGCGGG+GGG | - | chr6_1:85848768-85848787 | None:intergenic | 50.0% | |
| CAACAACGTGATTGCGTGAC+CGG | + | chr6_1:85848874-85848893 | Msa0896160:intron | 50.0% | |
| !! | GCACTGGGTGAAGTGTTGAA+TGG | + | chr6_1:85849074-85849093 | Msa0896160:CDS | 50.0% |
| ! | TTTTCGGTCCGCTGTTCGTA+AGG | + | chr6_1:85849196-85849215 | Msa0896160:CDS | 50.0% |
| AACGGATCCAAATGCCCTTG+TGG | + | chr6_1:85849382-85849401 | Msa0896160:CDS | 50.0% | |
| TGCCCTTGTGGATGTTACAG+AGG | + | chr6_1:85849394-85849413 | Msa0896160:CDS | 50.0% | |
| CTAACACTCCCTTCGAGAAG+CGG | + | chr6_1:85849465-85849484 | Msa0896160:CDS | 50.0% | |
| TTGTCCATCCGCTTCTCGAA+GGG | - | chr6_1:85849476-85849495 | None:intergenic | 50.0% | |
| ! | AAATGATGGGGTAGCGAGGA+TGG | - | chr6_1:85849509-85849528 | None:intergenic | 50.0% |
| ATCCTCGCTACCCCATCATT+TGG | + | chr6_1:85849508-85849527 | Msa0896160:CDS | 50.0% | |
| ! | TTCCAAATGATGGGGTAGCG+AGG | - | chr6_1:85849513-85849532 | None:intergenic | 50.0% |
| ACATGATGAGGAGACTGCAG+AGG | + | chr6_1:85849763-85849782 | Msa0896160:intron | 50.0% | |
| TTTGCAGCAGCTCTTGGATC+TGG | + | chr6_1:85849854-85849873 | Msa0896160:intron | 50.0% | |
| AATAGAGCCCCTCGGTTGTA+CGG | - | chr6_1:85850060-85850079 | None:intergenic | 50.0% | |
| GCACTCACTTCAGGAATTGC+TGG | + | chr6_1:85850102-85850121 | Msa0896160:CDS | 50.0% | |
| ! | TTGACCGGATGCCTTTTCTG+TGG | + | chr6_1:85850286-85850305 | Msa0896160:CDS | 50.0% |
| ! | TGACCGGATGCCTTTTCTGT+GGG | + | chr6_1:85850287-85850306 | Msa0896160:CDS | 50.0% |
| AATTGTGCCGAATGGGAGAG+CGG | - | chr6_1:85850371-85850390 | None:intergenic | 50.0% | |
| CTTGTATTGGGAGGGATTGC+TGG | + | chr6_1:85850433-85850452 | Msa0896160:CDS | 50.0% | |
| GATTGCTGGGAAGAACAGCA+AGG | + | chr6_1:85850447-85850466 | Msa0896160:CDS | 50.0% | |
| TCCTCCTTTGCCATGGTATC+GGG | + | chr6_1:85850516-85850535 | Msa0896160:CDS | 50.0% | |
| AGCGATTCCTCAGATGGCAA+TGG | + | chr6_1:85850540-85850559 | Msa0896160:CDS | 50.0% | |
| ATTCCTCAGATGGCAATGGC+AGG | + | chr6_1:85850544-85850563 | Msa0896160:CDS | 50.0% | |
| AATCCTGCCATTGCCATCTG+AGG | - | chr6_1:85850550-85850569 | None:intergenic | 50.0% | |
| CATGATCTTCAGCAGCAAGC+TGG | - | chr6_1:85850723-85850742 | None:intergenic | 50.0% | |
| AATAGACTCTCGAGTCCTGC+AGG | - | chr6_1:85851270-85851289 | None:intergenic | 50.0% | |
| TTCCTATGCGGTGGTTCAAC+TGG | + | chr6_1:85851750-85851769 | Msa0896160:CDS | 50.0% | |
| ATCCAGTTGAACCACCGCAT+AGG | - | chr6_1:85851755-85851774 | None:intergenic | 50.0% | |
| GAAACCAGACATATCGGAGC+GGG | - | chr6_1:85851814-85851833 | None:intergenic | 50.0% | |
| GATCCATCAAGTGCGAGTAG+AGG | + | chr6_1:85851946-85851965 | Msa0896160:CDS | 50.0% | |
| ATGCCTCTACTCGCACTTGA+TGG | - | chr6_1:85851952-85851971 | None:intergenic | 50.0% | |
| ! | ATAAGAGAAGCTGGGTTGGG+TGG | + | chr6_1:85852049-85852068 | Msa0896160:three_prime_UTR | 50.0% |
| ! | TAAGAGAAGCTGGGTTGGGT+GGG | + | chr6_1:85852050-85852069 | Msa0896160:three_prime_UTR | 50.0% |
| TTCACGTGCATTCCACGTGC+TGG | + | chr6_1:85847698-85847717 | Msa0896160:intron | 55.0% | |
| TGGTGACTCAGGTTCGAACC+CGG | - | chr6_1:85848740-85848759 | None:intergenic | 55.0% | |
| AAGCAAGAGACAAAGCGGGG+GGG | - | chr6_1:85848767-85848786 | None:intergenic | 55.0% | |
| CTTGTCCATCCGCTTCTCGA+AGG | - | chr6_1:85849477-85849496 | None:intergenic | 55.0% | |
| GTCACAGTCCTCCTCTTGAC+TGG | + | chr6_1:85849563-85849582 | Msa0896160:CDS | 55.0% | |
| TGAGGAGACTGCAGAGGATC+AGG | + | chr6_1:85849769-85849788 | Msa0896160:intron | 55.0% | |
| GCAGAGGATCAGGAAGAGAC+TGG | + | chr6_1:85849779-85849798 | Msa0896160:intron | 55.0% | |
| AGGATCAGGAAGAGACTGGC+TGG | + | chr6_1:85849783-85849802 | Msa0896160:intron | 55.0% | |
| GTGCAGTGAATAGAGCCCCT+CGG | - | chr6_1:85850068-85850087 | None:intergenic | 55.0% | |
| !! | AGGCCCACAGAAAAGGCATC+CGG | - | chr6_1:85850293-85850312 | None:intergenic | 55.0% |
| !! | TAGTTGTGCGGACTGGAGCT+TGG | - | chr6_1:85850480-85850499 | None:intergenic | 55.0% |
| GGCAAAGGAGGAATCTCCCT+TGG | - | chr6_1:85850508-85850527 | None:intergenic | 55.0% | |
| GGGAGATTCCTCCTTTGCCA+TGG | + | chr6_1:85850509-85850528 | Msa0896160:CDS | 55.0% | |
| CCTCCTTTGCCATGGTATCG+GGG | + | chr6_1:85850517-85850536 | Msa0896160:CDS | 55.0% | |
| AATTCTGTGGCCCCAGACAC+TGG | - | chr6_1:85850617-85850636 | None:intergenic | 55.0% | |
| TATGCCCGCTCCGATATGTC+TGG | + | chr6_1:85851807-85851826 | Msa0896160:CDS | 55.0% | |
| ACGGACACGGACACAGACAC+TGG | + | chr6_1:85847848-85847867 | Msa0896160:intron | 60.0% | |
| ! | GTCGTGTCGGTGTCCAACAC+CGG | + | chr6_1:85847930-85847949 | Msa0896160:intron | 60.0% |
| GGTGACTCAGGTTCGAACCC+GGG | - | chr6_1:85848739-85848758 | None:intergenic | 60.0% | |
| AGACAAAGCGGGGGGGAATG+TGG | - | chr6_1:85848760-85848779 | None:intergenic | 60.0% | |
| CACTCCCTTCGAGAAGCGGA+TGG | + | chr6_1:85849469-85849488 | Msa0896160:CDS | 60.0% | |
| GCTACTGCCGCTCTCCCATT+CGG | + | chr6_1:85850361-85850380 | Msa0896160:CDS | 60.0% | |
| CCCCGATACCATGGCAAAGG+AGG | - | chr6_1:85850520-85850539 | None:intergenic | 60.0% | |
| GCTCCCCGATACCATGGCAA+AGG | - | chr6_1:85850523-85850542 | None:intergenic | 60.0% | |
| GGAATCGCTCCCCGATACCA+TGG | - | chr6_1:85850529-85850548 | None:intergenic | 60.0% | |
| TCGGGGAGCGATTCCTCAGA+TGG | + | chr6_1:85850534-85850553 | Msa0896160:CDS | 60.0% | |
| GGGGGGGAATGTGGTGACTC+AGG | - | chr6_1:85848751-85848770 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 85847303 | 85852238 | 85847303 | ID=Msa0896160;Name=Msa0896160 |
| chr6_1 | mRNA | 85847303 | 85852238 | 85847303 | ID=Msa0896160-mRNA-1;Parent=Msa0896160;Name=Msa0896160-mRNA-1;_AED=0.05;_eAED=0.05;_QI=221|0.8|1|1|1|1|6|273|546 |
| chr6_1 | exon | 85847303 | 85847678 | 85847303 | ID=Msa0896160-mRNA-1:exon:14464;Parent=Msa0896160-mRNA-1 |
| chr6_1 | exon | 85848055 | 85848095 | 85848055 | ID=Msa0896160-mRNA-1:exon:14465;Parent=Msa0896160-mRNA-1 |
| chr6_1 | exon | 85849051 | 85849633 | 85849051 | ID=Msa0896160-mRNA-1:exon:14466;Parent=Msa0896160-mRNA-1 |
| chr6_1 | exon | 85850014 | 85850170 | 85850014 | ID=Msa0896160-mRNA-1:exon:14467;Parent=Msa0896160-mRNA-1 |
| chr6_1 | exon | 85850271 | 85850755 | 85850271 | ID=Msa0896160-mRNA-1:exon:14468;Parent=Msa0896160-mRNA-1 |
| chr6_1 | exon | 85851746 | 85852238 | 85851746 | ID=Msa0896160-mRNA-1:exon:14469;Parent=Msa0896160-mRNA-1 |
| chr6_1 | five_prime_UTR | 85847303 | 85847523 | 85847303 | ID=Msa0896160-mRNA-1:five_prime_utr;Parent=Msa0896160-mRNA-1 |
| chr6_1 | CDS | 85847524 | 85847678 | 85847524 | ID=Msa0896160-mRNA-1:cds;Parent=Msa0896160-mRNA-1 |
| chr6_1 | CDS | 85848055 | 85848095 | 85848055 | ID=Msa0896160-mRNA-1:cds;Parent=Msa0896160-mRNA-1 |
| chr6_1 | CDS | 85849051 | 85849633 | 85849051 | ID=Msa0896160-mRNA-1:cds;Parent=Msa0896160-mRNA-1 |
| chr6_1 | CDS | 85850014 | 85850170 | 85850014 | ID=Msa0896160-mRNA-1:cds;Parent=Msa0896160-mRNA-1 |
| chr6_1 | CDS | 85850271 | 85850755 | 85850271 | ID=Msa0896160-mRNA-1:cds;Parent=Msa0896160-mRNA-1 |
| chr6_1 | CDS | 85851746 | 85851965 | 85851746 | ID=Msa0896160-mRNA-1:cds;Parent=Msa0896160-mRNA-1 |
| chr6_1 | three_prime_UTR | 85851966 | 85852238 | 85851966 | ID=Msa0896160-mRNA-1:three_prime_utr;Parent=Msa0896160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
