Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0922500 | XP_003620064.1 | 90.878 | 592 | 4 | 2 | 1 | 546 | 1 | 588 | 0.0 | 1084 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0922500 | sp|Q9ZPS7|TMN3_ARATH | 81.152 | 573 | 61 | 2 | 21 | 546 | 20 | 592 | 0.0 | 930 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005690 | Msa0922500 | -0.814281 | 1.668789e-51 | -8.615850e-47 |
| Msa0043150 | Msa0922500 | 0.801355 | 9.364853e-49 | -8.615850e-47 |
| Msa0061600 | Msa0922500 | 0.831728 | 1.416242e-55 | -8.615850e-47 |
| Msa0064550 | Msa0922500 | -0.800071 | 1.711788e-48 | -8.615850e-47 |
| Msa0085030 | Msa0922500 | 0.818146 | 2.282716e-52 | -8.615850e-47 |
| Msa0089080 | Msa0922500 | 0.804599 | 1.999425e-49 | -8.615850e-47 |
| Msa0096510 | Msa0922500 | -0.818252 | 2.159521e-52 | -8.615850e-47 |
| Msa0106130 | Msa0922500 | 0.808027 | 3.788596e-50 | -8.615850e-47 |
| Msa0606120 | Msa0922500 | 0.824146 | 9.454460e-54 | -8.615850e-47 |
| Msa0659300 | Msa0922500 | 0.801410 | 9.123282e-49 | -8.615850e-47 |
| Msa0679780 | Msa0922500 | -0.828138 | 1.061913e-54 | -8.615850e-47 |
| Msa0697600 | Msa0922500 | -0.810083 | 1.375048e-50 | -8.615850e-47 |
| Msa0705050 | Msa0922500 | -0.838261 | 3.195161e-57 | -8.615850e-47 |
| Msa0734760 | Msa0922500 | -0.820241 | 7.611490e-53 | -8.615850e-47 |
| Msa0813630 | Msa0922500 | -0.820681 | 6.031570e-53 | -8.615850e-47 |
| Msa0135890 | Msa0922500 | 0.811065 | 8.434473e-51 | -8.615850e-47 |
| Msa0176620 | Msa0922500 | 0.804337 | 2.267352e-49 | -8.615850e-47 |
| Msa0198440 | Msa0922500 | -0.806190 | 9.278901e-50 | -8.615850e-47 |
| Msa0229140 | Msa0922500 | 0.804648 | 1.952791e-49 | -8.615850e-47 |
| Msa0378700 | Msa0922500 | -0.801251 | 9.832033e-49 | -8.615850e-47 |
| Msa0433680 | Msa0922500 | 0.846592 | 1.971813e-59 | -8.615850e-47 |
| Msa0477560 | Msa0922500 | 0.826561 | 2.535052e-54 | -8.615850e-47 |
| Msa0264940 | Msa0922500 | 0.807123 | 5.894459e-50 | -8.615850e-47 |
| Msa0265980 | Msa0922500 | 0.863665 | 2.116685e-64 | -8.615850e-47 |
| Msa0278670 | Msa0922500 | -0.806307 | 8.766457e-50 | -8.615850e-47 |
| Msa0302990 | Msa0922500 | 0.806032 | 1.001456e-49 | -8.615850e-47 |
| Msa0303920 | Msa0922500 | 0.809322 | 2.003770e-50 | -8.615850e-47 |
| Msa0545230 | Msa0922500 | -0.817462 | 3.256835e-52 | -8.615850e-47 |
| Msa0896160 | Msa0922500 | 0.818618 | 1.784284e-52 | -8.615850e-47 |
| Msa0899730 | Msa0922500 | -0.828573 | 8.340881e-55 | -8.615850e-47 |
| Msa0922500 | Msa1036250 | -0.822953 | 1.797512e-53 | -8.615850e-47 |
| Msa0922500 | Msa1040730 | 0.832083 | 1.157299e-55 | -8.615850e-47 |
| Msa0922500 | Msa1069440 | -0.818223 | 2.193157e-52 | -8.615850e-47 |
| Msa0922500 | Msa1076520 | -0.822553 | 2.227876e-53 | -8.615850e-47 |
| Msa0922500 | Msa1108540 | 0.821024 | 5.031080e-53 | -8.615850e-47 |
| Msa0922500 | Msa1150880 | 0.803295 | 3.732276e-49 | -8.615850e-47 |
| Msa0922500 | Msa1152290 | 0.822405 | 2.410680e-53 | -8.615850e-47 |
| Msa0922500 | Msa1207480 | 0.802361 | 5.818903e-49 | -8.615850e-47 |
| Msa0922500 | Msa1211390 | -0.807761 | 4.315420e-50 | -8.615850e-47 |
| Msa0922500 | Msa1216600 | 0.800507 | 1.395154e-48 | -8.615850e-47 |
| Msa0922500 | Msa1219780 | 0.807178 | 5.737323e-50 | -8.615850e-47 |
| Msa0922500 | Msa1222030 | 0.810806 | 9.599281e-51 | -8.615850e-47 |
| Msa0922500 | Msa1237260 | -0.804674 | 1.928984e-49 | -8.615850e-47 |
| Msa0922500 | Msa1245120 | 0.869732 | 2.483798e-66 | -8.615850e-47 |
| Msa0922500 | Msa1336100 | 0.800984 | 1.114927e-48 | -8.615850e-47 |
| Msa0922500 | Msa1357490 | 0.800067 | 1.714579e-48 | -8.615850e-47 |
| Msa0922500 | Msa1370930 | 0.833472 | 5.229598e-56 | -8.615850e-47 |
| Msa0922500 | Msa1389350 | 0.809900 | 1.505388e-50 | -8.615850e-47 |
| Msa0922500 | Msa1395690 | 0.802950 | 4.397771e-49 | -8.615850e-47 |
| Msa0922500 | Msa1407210 | 0.813924 | 2.000657e-51 | -8.615850e-47 |
| Msa0922500 | Msa1426420 | 0.805751 | 1.147557e-49 | -8.615850e-47 |
| Msa0922500 | Msa1431240 | -0.812825 | 3.488639e-51 | -8.615850e-47 |
| Msa0922500 | Msa1451660 | 0.838613 | 2.591346e-57 | -8.615850e-47 |
| Msa0922500 | Msa1460310 | 0.805395 | 1.362868e-49 | -8.615850e-47 |
| Msa0922500 | Msa1463590 | 0.842677 | 2.233829e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0922500 | MtrunA17_Chr6g0480551 | 90.878 | 592 | 4 | 2 | 1 | 546 | 1 | 588 | 0.0 | 1084 |
| Msa0922500 | MtrunA17_Chr8g0375501 | 80.484 | 579 | 66 | 2 | 15 | 546 | 13 | 591 | 0.0 | 936 |
| Msa0922500 | MtrunA17_Chr5g0434001 | 71.304 | 575 | 117 | 2 | 20 | 546 | 33 | 607 | 0.0 | 843 |
| Msa0922500 | MtrunA17_Chr4g0026371 | 44.133 | 571 | 273 | 4 | 21 | 546 | 20 | 589 | 2.93e-175 | 507 |
| Msa0922500 | MtrunA17_Chr8g0380651 | 35.652 | 575 | 310 | 6 | 25 | 546 | 22 | 589 | 4.03e-121 | 369 |
| Msa0922500 | MtrunA17_Chr2g0277491 | 36.760 | 574 | 303 | 7 | 25 | 546 | 18 | 583 | 1.57e-118 | 362 |
| Msa0922500 | MtrunA17_Chr8g0342031 | 30.380 | 632 | 331 | 10 | 12 | 546 | 29 | 648 | 3.30e-101 | 319 |
| Msa0922500 | MtrunA17_Chr1g0150181 | 28.990 | 614 | 335 | 11 | 28 | 546 | 30 | 637 | 4.71e-91 | 292 |
| Msa0922500 | MtrunA17_Chr3g0136881 | 29.112 | 608 | 330 | 10 | 34 | 546 | 35 | 636 | 1.04e-89 | 288 |
| Msa0922500 | MtrunA17_Chr4g0065301 | 24.375 | 640 | 352 | 15 | 27 | 546 | 29 | 656 | 2.27e-61 | 213 |
| Msa0922500 | MtrunA17_Chr5g0448371 | 25.040 | 631 | 348 | 17 | 32 | 546 | 44 | 665 | 2.20e-55 | 197 |
| Msa0922500 | MtrunA17_Chr3g0120461 | 24.876 | 607 | 334 | 15 | 55 | 546 | 60 | 659 | 5.52e-55 | 196 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0922500 | AT2G01970.1 | 81.152 | 573 | 61 | 2 | 21 | 546 | 20 | 592 | 0.0 | 930 |
| Msa0922500 | AT1G14670.1 | 81.086 | 571 | 61 | 2 | 23 | 546 | 22 | 592 | 0.0 | 901 |
| Msa0922500 | AT5G37310.1 | 76.655 | 574 | 87 | 2 | 20 | 546 | 20 | 593 | 0.0 | 870 |
| Msa0922500 | AT5G37310.2 | 76.655 | 574 | 87 | 2 | 20 | 546 | 20 | 593 | 0.0 | 870 |
| Msa0922500 | AT1G08350.3 | 46.924 | 569 | 254 | 4 | 25 | 546 | 22 | 589 | 0.0 | 552 |
| Msa0922500 | AT1G08350.2 | 46.924 | 569 | 254 | 4 | 25 | 546 | 22 | 589 | 0.0 | 552 |
| Msa0922500 | AT1G08350.1 | 44.794 | 509 | 233 | 4 | 85 | 546 | 1 | 508 | 5.14e-161 | 468 |
| Msa0922500 | AT1G08350.4 | 45.674 | 497 | 223 | 3 | 25 | 474 | 22 | 518 | 1.27e-159 | 466 |
| Msa0922500 | AT1G10950.1 | 35.602 | 573 | 311 | 6 | 25 | 546 | 24 | 589 | 2.08e-118 | 362 |
| Msa0922500 | AT3G13772.1 | 28.664 | 614 | 333 | 9 | 30 | 546 | 36 | 641 | 1.83e-94 | 301 |
| Msa0922500 | AT1G55130.1 | 29.542 | 633 | 337 | 10 | 15 | 546 | 13 | 637 | 3.31e-94 | 301 |
| Msa0922500 | AT2G24170.1 | 29.302 | 645 | 349 | 9 | 1 | 546 | 1 | 637 | 1.18e-93 | 299 |
| Msa0922500 | AT5G10840.1 | 28.780 | 615 | 336 | 10 | 28 | 546 | 40 | 648 | 1.21e-91 | 294 |
| Msa0922500 | AT5G25100.1 | 28.363 | 617 | 338 | 9 | 28 | 546 | 34 | 644 | 3.83e-91 | 293 |
| Msa0922500 | AT5G25100.2 | 28.689 | 610 | 331 | 9 | 35 | 546 | 48 | 651 | 2.46e-90 | 291 |
| Msa0922500 | AT5G35160.2 | 24.290 | 634 | 354 | 16 | 31 | 546 | 33 | 658 | 7.44e-51 | 185 |
| Msa0922500 | AT5G35160.3 | 24.290 | 634 | 354 | 16 | 31 | 546 | 33 | 658 | 7.44e-51 | 185 |
| Msa0922500 | AT5G35160.4 | 24.290 | 634 | 354 | 16 | 31 | 546 | 33 | 658 | 7.44e-51 | 185 |
| Msa0922500 | AT5G35160.1 | 24.121 | 597 | 329 | 14 | 67 | 546 | 41 | 630 | 3.35e-46 | 172 |
| Msa0922500 | AT4G12650.1 | 25.847 | 472 | 278 | 10 | 136 | 546 | 192 | 652 | 1.04e-43 | 165 |
| Msa0922500 | AT2G24170.2 | 23.725 | 451 | 238 | 8 | 1 | 352 | 1 | 444 | 8.16e-37 | 142 |
Find 156 sgRNAs with CRISPR-Local
Find 343 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTATGATGATTTGCCTATT+TGG | 0.197680 | 6_2:+61109694 | Msa0922500:CDS |
| ATTATATATTTGCCAGTGTC+TGG | 0.215685 | 6_2:+61111059 | Msa0922500:CDS |
| TTATGATGATTTGCCTATTT+GGG | 0.236802 | 6_2:+61109695 | Msa0922500:CDS |
| GGTTCATTTGAACGCAATTC+TGG | 0.272718 | 6_2:+61112638 | Msa0922500:three_prime_UTR |
| TCTTATTGTCTTCATTTCAT+AGG | 0.299928 | 6_2:+61112440 | Msa0922500:three_prime_UTR |
| TTGCCTATTTGGGGTTTCAT+AGG | 0.302131 | 6_2:+61109705 | Msa0922500:CDS |
| CTTGTATTGGGAGGGATTGC+TGG | 0.316117 | 6_2:+61110890 | Msa0922500:CDS |
| TACGTCTCCTCTACTTGTAT+TGG | 0.316329 | 6_2:+61110877 | Msa0922500:CDS |
| GTTATATATGCACTCACTTC+AGG | 0.319264 | 6_2:+61110550 | Msa0922500:CDS |
| TCCTCCTTTGCCATGGTATC+GGG | 0.329441 | 6_2:+61110973 | Msa0922500:CDS |
| TTCTTGATGCTTGGAACTGT+TGG | 0.329989 | 6_2:+61112346 | Msa0922500:CDS |
| TTCCTATGCGGTGGTTCAAC+TGG | 0.342782 | 6_2:+61112211 | Msa0922500:CDS |
| TACGGTGTTCATATTCATAT+TGG | 0.349084 | 6_2:+61110471 | Msa0922500:CDS |
| ACGTCTCCTCTACTTGTATT+GGG | 0.350290 | 6_2:+61110878 | Msa0922500:CDS |
| TGTTATAAAATATATCAAAA+TGG | 0.350719 | 6_2:-61109788 | None:intergenic |
| AACCAACCTGGTATACAAAA+TGG | 0.355606 | 6_2:-61108536 | None:intergenic |
| CACCGCTTCAATCTTATGTT+TGG | 0.360697 | 6_2:-61107764 | None:intergenic |
| ACTTGACAAAATCATTCTTA+AGG | 0.370613 | 6_2:-61110070 | None:intergenic |
| GTAACATCCACAAGGGCATT+TGG | 0.374033 | 6_2:-61109846 | None:intergenic |
| AAATGCCTACTCGCACTTGA+TGG | 0.387744 | 6_2:-61112410 | None:intergenic |
| AAGAAGGCGAGGATGAATAA+TGG | 0.388893 | 6_2:-61107995 | None:intergenic |
| TTGTCGTTATAGTTCTCATA+TGG | 0.395244 | 6_2:+61110846 | Msa0922500:CDS |
| ATATTCATATTGGCACTTGT+TGG | 0.402301 | 6_2:+61110481 | Msa0922500:CDS |
| TTCCTCCTTTGCCATGGTAT+CGG | 0.402307 | 6_2:+61110972 | Msa0922500:CDS |
| GGATATGAAGAGAGAAGAAA+TGG | 0.406257 | 6_2:-61108020 | None:intergenic |
| TTCCCTATGAAACCCCAAAT+AGG | 0.409018 | 6_2:-61109708 | None:intergenic |
| ACCAGTGGATTTCCAAATGA+TGG | 0.412001 | 6_2:-61109977 | None:intergenic |
| GCACTCACTTCAGGAATTGC+TGG | 0.413621 | 6_2:+61110559 | Msa0922500:CDS |
| GTCAACTGGAAGGAACAAAC+TGG | 0.416389 | 6_2:+61110605 | Msa0922500:CDS |
| TTTGGTTTCTTCTTGATGCT+TGG | 0.416603 | 6_2:+61112337 | Msa0922500:CDS |
| GTCCTCGCTACCCCATCATT+TGG | 0.419122 | 6_2:+61109965 | Msa0922500:CDS |
| TACATGGCCTGCATATGCTT+TGG | 0.422165 | 6_2:+61112319 | Msa0922500:CDS |
| CACTGGGTGAAGTGTTGAAT+GGG | 0.423169 | 6_2:+61109532 | Msa0922500:CDS |
| TTATATATTTGCCAGTGTCT+GGG | 0.430768 | 6_2:+61111060 | Msa0922500:CDS |
| TATTACCAACCAATCTTCAA+TGG | 0.438341 | 6_2:+61107961 | Msa0922500:exon |
| TCATCTTCGCCATTGAAGAT+TGG | 0.438390 | 6_2:-61107970 | None:intergenic |
| TTTCATAGGGAAGGTTGATA+AGG | 0.446067 | 6_2:+61109719 | Msa0922500:CDS |
| GGATATTTAGTTGTGCGGAC+TGG | 0.447634 | 6_2:-61110941 | None:intergenic |
| GAGAGAAGAAATGGAGAAGA+AGG | 0.451582 | 6_2:-61108011 | None:intergenic |
| GTCACAGTCCTCCTCTTGAC+TGG | 0.456631 | 6_2:+61110020 | Msa0922500:CDS |
| TATATAAGAGAAGCTGGGTT+GGG | 0.458343 | 6_2:+61112505 | Msa0922500:three_prime_UTR |
| GAAATAGAGGCCCACAGAAA+AGG | 0.459642 | 6_2:-61110754 | None:intergenic |
| GTGTACTATATAAGAGAAGC+TGG | 0.466139 | 6_2:+61112499 | Msa0922500:three_prime_UTR |
| CATGATCTTCAGCAGCTAGC+TGG | 0.469916 | 6_2:-61111177 | None:intergenic |
| AAGCAAAATGTAAGAAATAG+AGG | 0.470399 | 6_2:-61110767 | None:intergenic |
| CCCATCATTTGGAAATCCAC+TGG | 0.476786 | 6_2:+61109976 | Msa0922500:CDS |
| GAAAGAGAAGAAAGAAGCAC+TGG | 0.478603 | 6_2:+61109515 | Msa0922500:CDS |
| ATAGTAGTAATACAGACAAT+AGG | 0.479087 | 6_2:-61112248 | None:intergenic |
| TATGCCCGCTCCGATATGTC+TGG | 0.480652 | 6_2:+61112268 | Msa0922500:CDS |
| TGTGATCTAACAAGTTGCTC+TGG | 0.487264 | 6_2:-61112542 | None:intergenic |
| TACCTCATTCTATTGTCAAC+TGG | 0.491307 | 6_2:+61110591 | Msa0922500:CDS |
| AATAGAGCCCCTCGGTTGTA+CGG | 0.492094 | 6_2:-61110514 | None:intergenic |
| TTGCATGAAACCAGACATAT+CGG | 0.492755 | 6_2:-61112278 | None:intergenic |
| TCAGATAAACGTTACAAAGA+AGG | 0.494228 | 6_2:+61108061 | Msa0922500:CDS |
| CTATATAAGAGAAGCTGGGT+TGG | 0.497740 | 6_2:+61112504 | Msa0922500:three_prime_UTR |
| TAACGACAATTGTGCCGAAT+GGG | 0.498949 | 6_2:-61110832 | None:intergenic |
| TTGTATTGGGAGGGATTGCT+GGG | 0.499754 | 6_2:+61110891 | Msa0922500:CDS |
| AAGTACCTTGGATTATGAAA+AGG | 0.506207 | 6_2:-61108118 | None:intergenic |
| AATTCTGTGGCCCCAGACAC+TGG | 0.506214 | 6_2:-61111071 | None:intergenic |
| TATTTGGGGTTTCATAGGGA+AGG | 0.508176 | 6_2:+61109710 | Msa0922500:CDS |
| CTTCGCCATTGAAGATTGGT+TGG | 0.509181 | 6_2:-61107966 | None:intergenic |
| TGCCTATTTGGGGTTTCATA+GGG | 0.512616 | 6_2:+61109706 | Msa0922500:CDS |
| GCTACTGCCGCTCTCCCATT+CGG | 0.515377 | 6_2:+61110818 | Msa0922500:CDS |
| CCTCTCTTCGCTAACAAAGT+TGG | 0.516706 | 6_2:+61108094 | Msa0922500:CDS |
| CCAGTGGATTTCCAAATGAT+GGG | 0.517728 | 6_2:-61109976 | None:intergenic |
| CAAAATGGATGTGCTTGTAA+AGG | 0.520184 | 6_2:-61109773 | None:intergenic |
| ATAGGGAAGGTTGATAAGGA+GGG | 0.521709 | 6_2:+61109723 | Msa0922500:CDS |
| TTGTCCATCCGCTTCTCAAA+GGG | 0.522056 | 6_2:-61109930 | None:intergenic |
| CTCCTCTACTTGTATTGGGA+GGG | 0.524300 | 6_2:+61110882 | Msa0922500:CDS |
| GGCAAAGGAGGAATCTCCCT+TGG | 0.527338 | 6_2:-61110962 | None:intergenic |
| GACACTTACAAAAGAAGAAG+TGG | 0.527829 | 6_2:+61109626 | Msa0922500:CDS |
| CCCTTGGATATTTAGTTGTG+CGG | 0.531342 | 6_2:-61110946 | None:intergenic |
| AGTGTTGAATGGGGATAGGT+TGG | 0.533187 | 6_2:+61109542 | Msa0922500:CDS |
| TATGATGATTTGCCTATTTG+GGG | 0.533815 | 6_2:+61109696 | Msa0922500:CDS |
| TTTCTATACTGTGAAATGGA+AGG | 0.537931 | 6_2:+61109896 | Msa0922500:CDS |
| ATTCCTCAGATGGCAATGGC+AGG | 0.540197 | 6_2:+61111001 | Msa0922500:CDS |
| CATAGGGAAGGTTGATAAGG+AGG | 0.540980 | 6_2:+61109722 | Msa0922500:CDS |
| CTTGTCCATCCGCTTCTCAA+AGG | 0.541803 | 6_2:-61109931 | None:intergenic |
| TAGTTGTGCGGACTGGAGCT+TGG | 0.548078 | 6_2:-61110934 | None:intergenic |
| GCACTGGGTGAAGTGTTGAA+TGG | 0.549117 | 6_2:+61109531 | Msa0922500:CDS |
| AAATGATGGGGTAGCGAGGA+CGG | 0.550197 | 6_2:-61109963 | None:intergenic |
| AGGTAGTATCTATAATCACT+AGG | 0.554450 | 6_2:-61109753 | None:intergenic |
| TATATATTTGCCAGTGTCTG+GGG | 0.557505 | 6_2:+61111061 | Msa0922500:CDS |
| AAGAAATGGAGAAGAAGGCG+AGG | 0.559753 | 6_2:-61108006 | None:intergenic |
| AAAAGAAGGAAGGTGAAGAT+GGG | 0.560065 | 6_2:-61107807 | None:intergenic |
| TAAGAGAAGCTGGGTTGGGT+GGG | 0.560617 | 6_2:+61112509 | Msa0922500:three_prime_UTR |
| AGGCCCACAGAAAAGGCATC+CGG | 0.561889 | 6_2:-61110747 | None:intergenic |
| GAAGAAACCAAAGCATATGC+AGG | 0.562481 | 6_2:-61112326 | None:intergenic |
| CCCCGATACCATGGCAAAGG+AGG | 0.562801 | 6_2:-61110974 | None:intergenic |
| GAAACCAGACATATCGGAGC+GGG | 0.562807 | 6_2:-61112272 | None:intergenic |
| GGTAGTATCTATAATCACTA+GGG | 0.562961 | 6_2:-61109752 | None:intergenic |
| ATAAGAGAAGCTGGGTTGGG+TGG | 0.563871 | 6_2:+61112508 | Msa0922500:three_prime_UTR |
| CTGAAGATCATGAATGGTGG+TGG | 0.564533 | 6_2:+61111188 | Msa0922500:CDS |
| TACAGATCATTCCTATGCGG+TGG | 0.566423 | 6_2:+61112202 | Msa0922500:intron |
| ATCTGATGAATCAGATCTGA+CGG | 0.568724 | 6_2:-61108044 | None:intergenic |
| ATCCCTCCCAATACAAGTAG+AGG | 0.569721 | 6_2:-61110884 | None:intergenic |
| GTGAAGTGTTGAATGGGGAT+AGG | 0.575284 | 6_2:+61109538 | Msa0922500:CDS |
| TGTTACTGCTTTCATTACTG+TGG | 0.578518 | 6_2:+61111141 | Msa0922500:CDS |
| AACGGATCCAAATGCCCTTG+TGG | 0.580190 | 6_2:+61109839 | Msa0922500:CDS |
| TCGGGGAGCAATTCCTCAGA+TGG | 0.580703 | 6_2:+61110991 | Msa0922500:CDS |
| TTCCAGTTGACAATAGAATG+AGG | 0.583452 | 6_2:-61110593 | None:intergenic |
| AATCCTGCCATTGCCATCTG+AGG | 0.585284 | 6_2:-61111004 | None:intergenic |
| CCTACTCGCACTTGATGGAT+CGG | 0.585534 | 6_2:-61112405 | None:intergenic |
| CCAACTTTGTTAGCGAAGAG+AGG | 0.587195 | 6_2:-61108094 | None:intergenic |
| CACTCCCTTTGAGAAGCGGA+TGG | 0.589376 | 6_2:+61109926 | Msa0922500:CDS |
| GGGAGATTCCTCCTTTGCCA+TGG | 0.590122 | 6_2:+61110966 | Msa0922500:CDS |
| TCCGCACAACTAAATATCCA+AGG | 0.591816 | 6_2:+61110945 | Msa0922500:CDS |
| CTAACACTCCCTTTGAGAAG+CGG | 0.594183 | 6_2:+61109922 | Msa0922500:CDS |
| TCTCCTCTACTTGTATTGGG+AGG | 0.599263 | 6_2:+61110881 | Msa0922500:CDS |
| GTTCGGAATCTACTATTGAC+CGG | 0.603844 | 6_2:+61110728 | Msa0922500:CDS |
| ATAACGACAATTGTGCCGAA+TGG | 0.606594 | 6_2:-61110833 | None:intergenic |
| TAGCTGCTGAAGATCATGAA+TGG | 0.607231 | 6_2:+61111182 | Msa0922500:CDS |
| GGAGTGTGTTGATAATAAAG+AGG | 0.610696 | 6_2:-61107833 | None:intergenic |
| TTGATGTGAAAATGAAGAGA+GGG | 0.611255 | 6_2:-61107903 | None:intergenic |
| TTGCAAGAAAACCAGTCAAG+AGG | 0.612188 | 6_2:-61110031 | None:intergenic |
| CCTCCTTTGCCATGGTATCG+GGG | 0.612898 | 6_2:+61110974 | Msa0922500:CDS |
| GCTCCCCGATACCATGGCAA+AGG | 0.619903 | 6_2:-61110977 | None:intergenic |
| TTCCAAATGATGGGGTAGCG+AGG | 0.620376 | 6_2:-61109967 | None:intergenic |
| TCGATGTAAATAGCACTGAA+AGG | 0.620759 | 6_2:-61111031 | None:intergenic |
| CCGATCCATCAAGTGCGAGT+AGG | 0.623339 | 6_2:+61112405 | Msa0922500:CDS |
| GGAATTGCTCCCCGATACCA+TGG | 0.625145 | 6_2:-61110983 | None:intergenic |
| AATTGATAATCGAAAACCAG+TGG | 0.626537 | 6_2:-61109992 | None:intergenic |
| TGTACTATATAAGAGAAGCT+GGG | 0.628958 | 6_2:+61112500 | Msa0922500:three_prime_UTR |
| TCATTCTATTGTCAACTGGA+AGG | 0.630520 | 6_2:+61110595 | Msa0922500:CDS |
| ACTTGATGGATCGGTATATG+TGG | 0.631167 | 6_2:-61112396 | None:intergenic |
| CAAGAAAACCAGTCAAGAGG+AGG | 0.631428 | 6_2:-61110028 | None:intergenic |
| AGCAATTCCTCAGATGGCAA+TGG | 0.634595 | 6_2:+61110997 | Msa0922500:CDS |
| AAGATCATGAATGGTGGTGG+AGG | 0.635786 | 6_2:+61111191 | Msa0922500:CDS |
| TATTGAGATCAATGTGCGAA+CGG | 0.636703 | 6_2:+61109821 | Msa0922500:CDS |
| CACCAAACATAAGATTGAAG+CGG | 0.637337 | 6_2:+61107762 | Msa0922500:five_prime_UTR |
| ATCCAGTTGAACCACCGCAT+AGG | 0.639943 | 6_2:-61112213 | None:intergenic |
| GTGCAGTGAATAGAGCCCCT+CGG | 0.643541 | 6_2:-61110522 | None:intergenic |
| AATTGTGCCGAATGGGAGAG+CGG | 0.644658 | 6_2:-61110825 | None:intergenic |
| GAGTGTGTTGATAATAAAGA+GGG | 0.645942 | 6_2:-61107832 | None:intergenic |
| TAGGGAAGGTTGATAAGGAG+GGG | 0.648260 | 6_2:+61109724 | Msa0922500:CDS |
| TGCCCTTGTGGATGTTACAG+AGG | 0.650587 | 6_2:+61109851 | Msa0922500:CDS |
| GTTGATGTGAAAATGAAGAG+AGG | 0.653670 | 6_2:-61107904 | None:intergenic |
| AAAAGACAAGGACTCTGTGT+CGG | 0.658291 | 6_2:+61109593 | Msa0922500:CDS |
| CCGCACAACTAAATATCCAA+GGG | 0.660490 | 6_2:+61110946 | Msa0922500:CDS |
| CAGTGGATTTCCAAATGATG+GGG | 0.661541 | 6_2:-61109975 | None:intergenic |
| TGATGGATCGGTATATGTGG+CGG | 0.664035 | 6_2:-61112393 | None:intergenic |
| TGAAACCAGACATATCGGAG+CGG | 0.664795 | 6_2:-61112273 | None:intergenic |
| TGTCCTCTGTAACATCCACA+AGG | 0.669975 | 6_2:-61109854 | None:intergenic |
| AAAGAGAAGAAAGAAGCACT+GGG | 0.674148 | 6_2:+61109516 | Msa0922500:CDS |
| GGACAAAGAACAATGCTGCA+CGG | 0.675721 | 6_2:-61112372 | None:intergenic |
| TCAACTGGAAGGAACAAACT+GGG | 0.689021 | 6_2:+61110606 | Msa0922500:CDS |
| CCTTACAGATCATTCCTATG+CGG | 0.691017 | 6_2:+61112199 | Msa0922500:intron |
| TGTAGATTGTGTAAATTCTG+TGG | 0.694009 | 6_2:-61111084 | None:intergenic |
| TGATGTGAAAATGAAGAGAG+GGG | 0.697121 | 6_2:-61107902 | None:intergenic |
| CTGCTGAAGATCATGAATGG+TGG | 0.708643 | 6_2:+61111185 | Msa0922500:CDS |
| GATTGCTGGGAAGAACAGCA+AGG | 0.708765 | 6_2:+61110904 | Msa0922500:CDS |
| GTCCTCTGTAACATCCACAA+GGG | 0.709898 | 6_2:-61109853 | None:intergenic |
| GTAGTAGTCCTTACGAACAG+CGG | 0.726687 | 6_2:-61109661 | None:intergenic |
| GATGTGAAAATGAAGAGAGG+GGG | 0.732700 | 6_2:-61107901 | None:intergenic |
| TGATGAATCAGATCTGACGG+TGG | 0.733896 | 6_2:-61108041 | None:intergenic |
| ACTGGGTGAAGTGTTGAATG+GGG | 0.747764 | 6_2:+61109533 | Msa0922500:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATGTTTAATTTTTAAATCA+TGG | + | chr6_2:61108729-61108748 | Msa0922500:intron | 10.0% |
| !! | TGTTATAAAATATATCAAAA+TGG | - | chr6_2:61109791-61109810 | None:intergenic | 10.0% |
| !!! | TTTTGATATATTTTATAACA+AGG | + | chr6_2:61109791-61109810 | Msa0922500:CDS | 10.0% |
| !!! | ATTTTAACAAAATAATAAAC+TGG | - | chr6_2:61111543-61111562 | None:intergenic | 10.0% |
| !!! | ATTCTATCACATTTTTTAAT+TGG | + | chr6_2:61108244-61108263 | Msa0922500:intron | 15.0% |
| !!! | TTCTATCACATTTTTTAATT+GGG | + | chr6_2:61108245-61108264 | Msa0922500:intron | 15.0% |
| !!! | AAGTTTTAATTTTTAAATCG+TGG | + | chr6_2:61108600-61108619 | Msa0922500:intron | 15.0% |
| !!! | TTTTTAAATCATGGTTATTT+AGG | + | chr6_2:61108738-61108757 | Msa0922500:intron | 15.0% |
| !!! | TTTTAAATCATGGTTATTTA+GGG | + | chr6_2:61108739-61108758 | Msa0922500:intron | 15.0% |
| !!! | TTTTCTTATCATTAATATCA+AGG | - | chr6_2:61108946-61108965 | None:intergenic | 15.0% |
| !! | ATTAATGATAAGAAAATCAA+AGG | + | chr6_2:61108950-61108969 | Msa0922500:intron | 15.0% |
| !!! | ATGCAAATGTTTTAAAATAT+CGG | + | chr6_2:61108989-61109008 | Msa0922500:intron | 15.0% |
| !!! | ATTTTGAGATATTTTCTTTT+TGG | + | chr6_2:61109454-61109473 | Msa0922500:intron | 15.0% |
| !!! | TTTTGAGATATTTTCTTTTT+GGG | + | chr6_2:61109455-61109474 | Msa0922500:intron | 15.0% |
| !! | AAAAAAAACACAAATAGAAA+AGG | - | chr6_2:61110102-61110121 | None:intergenic | 15.0% |
| !!! | TTTCTATTTGTGTTTTTTTT+TGG | + | chr6_2:61110102-61110121 | Msa0922500:intron | 15.0% |
| !! | TAAGTAGTAAATATGAATTA+TGG | + | chr6_2:61111379-61111398 | Msa0922500:intron | 15.0% |
| !!! | TCTTGAAATACTTTATTTTT+TGG | + | chr6_2:61112616-61112635 | Msa0922500:three_prime_UTR | 15.0% |
| !!! | CTTGAAATACTTTATTTTTT+GGG | + | chr6_2:61112617-61112636 | Msa0922500:three_prime_UTR | 15.0% |
| !! | ATATAAGAAGATGAAAAATG+TGG | - | chr6_2:61107857-61107876 | None:intergenic | 20.0% |
| !!! | ATTTTTAAATCGTGGTTATT+CGG | + | chr6_2:61108608-61108627 | Msa0922500:intron | 20.0% |
| !!! | GTTTTAAGTTATAGTTATGT+TGG | + | chr6_2:61108632-61108651 | Msa0922500:intron | 20.0% |
| !! | TCAATTCTTAAATCATGTAA+CGG | - | chr6_2:61109054-61109073 | None:intergenic | 20.0% |
| !! | AAATCATGATGTTAAAACAT+GGG | + | chr6_2:61109108-61109127 | Msa0922500:intron | 20.0% |
| !!! | TTTGAGATATTTTCTTTTTG+GGG | + | chr6_2:61109456-61109475 | Msa0922500:intron | 20.0% |
| !! | CTTTAATTGAACATATTGAA+TGG | - | chr6_2:61110370-61110389 | None:intergenic | 20.0% |
| !! | AATTAAAGAAAACTCATTTC+AGG | + | chr6_2:61110382-61110401 | Msa0922500:intron | 20.0% |
| !!! | ACTTATAAATCTATGCATTT+TGG | + | chr6_2:61110634-61110653 | Msa0922500:intron | 20.0% |
| !! | AAACAATAAACCATAGAAAT+TGG | - | chr6_2:61111254-61111273 | None:intergenic | 20.0% |
| !!! | TTTTGAAGTGAATTATTTGA+TGG | + | chr6_2:61111600-61111619 | Msa0922500:intron | 20.0% |
| !!! | TGTTTTTTACAAAGTAAACA+TGG | + | chr6_2:61111804-61111823 | Msa0922500:intron | 20.0% |
| !!! | AAATAACTTGTCAAAACATT+AGG | - | chr6_2:61111830-61111849 | None:intergenic | 20.0% |
| !! | CAAGAGTTTAGTTAAAAATA+TGG | - | chr6_2:61112601-61112620 | None:intergenic | 20.0% |
| ! | TAATAAAGAGGGAAAAAAGA+AGG | - | chr6_2:61107824-61107843 | None:intergenic | 25.0% |
| !! | TTTTTAAATCGTGGTTATTC+GGG | + | chr6_2:61108609-61108628 | Msa0922500:intron | 25.0% |
| !! | TGGTTAGTATCATTTTATTG+CGG | + | chr6_2:61108652-61108671 | Msa0922500:intron | 25.0% |
| !!! | AGGGTTTTGATTTTAAATCA+TGG | + | chr6_2:61108758-61108777 | Msa0922500:intron | 25.0% |
| !!! | GGGTTTTGATTTTAAATCAT+GGG | + | chr6_2:61108759-61108778 | Msa0922500:intron | 25.0% |
| !!! | TATGTTGCTATTGTTTTGTT+AGG | + | chr6_2:61108782-61108801 | Msa0922500:intron | 25.0% |
| !!! | ATGTTGCTATTGTTTTGTTA+GGG | + | chr6_2:61108783-61108802 | Msa0922500:intron | 25.0% |
| !!! | ATGTTTTAAAATATCGGATC+CGG | + | chr6_2:61108995-61109014 | Msa0922500:intron | 25.0% |
| ! | CAAATCATGATGTTAAAACA+TGG | + | chr6_2:61109107-61109126 | Msa0922500:intron | 25.0% |
| ! | AAATAAAGAAAGAGACAAAG+CGG | - | chr6_2:61109229-61109248 | None:intergenic | 25.0% |
| !! | TTTCTTTATTTGAGAATGAG+TGG | + | chr6_2:61109238-61109257 | Msa0922500:intron | 25.0% |
| ! | CGTAGCTAAATAAAAAAACA+TGG | + | chr6_2:61109275-61109294 | Msa0922500:intron | 25.0% |
| !! | TCAATATTTAACTTTGGAAG+AGG | + | chr6_2:61109411-61109430 | Msa0922500:intron | 25.0% |
| !! | ATTATGATGATTTGCCTATT+TGG | + | chr6_2:61109694-61109713 | Msa0922500:CDS | 25.0% |
| !! | TTATGATGATTTGCCTATTT+GGG | + | chr6_2:61109695-61109714 | Msa0922500:CDS | 25.0% |
| !! | AGTTTTTCTATACTGTGAAA+TGG | + | chr6_2:61109892-61109911 | Msa0922500:CDS | 25.0% |
| ! | ACTTGACAAAATCATTCTTA+AGG | - | chr6_2:61110073-61110092 | None:intergenic | 25.0% |
| ! | AGCAAAAGAATAAATAACAG+AGG | - | chr6_2:61110157-61110176 | None:intergenic | 25.0% |
| ! | AAGCAAAATGTAAGAAATAG+AGG | - | chr6_2:61110770-61110789 | None:intergenic | 25.0% |
| ! | TACTAGTAATACCTAACTAA+GGG | - | chr6_2:61111283-61111302 | None:intergenic | 25.0% |
| ! | AGAATATGAAATTCTTGCTT+AGG | + | chr6_2:61111625-61111644 | Msa0922500:intron | 25.0% |
| ! | GAATATGAAATTCTTGCTTA+GGG | + | chr6_2:61111626-61111645 | Msa0922500:intron | 25.0% |
| ! | AATATGAAATTCTTGCTTAG+GGG | + | chr6_2:61111627-61111646 | Msa0922500:intron | 25.0% |
| !! | GACAAGTTATTTCAAACTTA+AGG | + | chr6_2:61111838-61111857 | Msa0922500:intron | 25.0% |
| ! | ATTAGTAATCTTTACTGTGT+TGG | + | chr6_2:61111866-61111885 | Msa0922500:intron | 25.0% |
| ! | CCAGATATAGAAAACATAAA+TGG | - | chr6_2:61111968-61111987 | None:intergenic | 25.0% |
| !! | CCATTTATGTTTTCTATATC+TGG | + | chr6_2:61111965-61111984 | Msa0922500:intron | 25.0% |
| !! | TGTTTTCTATATCTGGATTT+TGG | + | chr6_2:61111972-61111991 | Msa0922500:intron | 25.0% |
| ! | ATAGTAGTAATACAGACAAT+AGG | - | chr6_2:61112251-61112270 | None:intergenic | 25.0% |
| ! | TCTTATTGTCTTCATTTCAT+AGG | + | chr6_2:61112440-61112459 | Msa0922500:three_prime_UTR | 25.0% |
| !!! | GATCACAAAAGAAACTTTTT+TGG | + | chr6_2:61112558-61112577 | Msa0922500:three_prime_UTR | 25.0% |
| !! | GAGTGTGTTGATAATAAAGA+GGG | - | chr6_2:61107835-61107854 | None:intergenic | 30.0% |
| TTGATGTGAAAATGAAGAGA+GGG | - | chr6_2:61107906-61107925 | None:intergenic | 30.0% | |
| TATTACCAACCAATCTTCAA+TGG | + | chr6_2:61107961-61107980 | Msa0922500:exon | 30.0% | |
| TCAGATAAACGTTACAAAGA+AGG | + | chr6_2:61108061-61108080 | Msa0922500:CDS | 30.0% | |
| AAGTACCTTGGATTATGAAA+AGG | - | chr6_2:61108121-61108140 | None:intergenic | 30.0% | |
| TGCTTCAATTCTCTTATTAG+TGG | + | chr6_2:61108563-61108582 | Msa0922500:intron | 30.0% | |
| ! | TTTTAAATCGTGGTTATTCG+GGG | + | chr6_2:61108610-61108629 | Msa0922500:intron | 30.0% |
| ! | GGTTAGTATCATTTTATTGC+GGG | + | chr6_2:61108653-61108672 | Msa0922500:intron | 30.0% |
| !! | TGTTTTGTTAGGGAAAATTG+CGG | + | chr6_2:61108793-61108812 | Msa0922500:intron | 30.0% |
| TTAGCTAACTAAATGGTATC+CGG | - | chr6_2:61109017-61109036 | None:intergenic | 30.0% | |
| ! | GGATATTTTATGTGGAATCT+CGG | + | chr6_2:61109174-61109193 | Msa0922500:intron | 30.0% |
| ! | GATATTTTATGTGGAATCTC+GGG | + | chr6_2:61109175-61109194 | Msa0922500:intron | 30.0% |
| AATAAAGAAAGAGACAAAGC+GGG | - | chr6_2:61109228-61109247 | None:intergenic | 30.0% | |
| TGGTAATTTGGCAAGTAAAT+TGG | - | chr6_2:61109359-61109378 | None:intergenic | 30.0% | |
| GAAAATCAGTTGTGGTAATT+TGG | - | chr6_2:61109371-61109390 | None:intergenic | 30.0% | |
| ACTGATAAGAAAATCAGTTG+TGG | - | chr6_2:61109379-61109398 | None:intergenic | 30.0% | |
| ! | GCTGACTCAATATTTAACTT+TGG | + | chr6_2:61109405-61109424 | Msa0922500:intron | 30.0% |
| ! | TATGATGATTTGCCTATTTG+GGG | + | chr6_2:61109696-61109715 | Msa0922500:CDS | 30.0% |
| GGTAGTATCTATAATCACTA+GGG | - | chr6_2:61109755-61109774 | None:intergenic | 30.0% | |
| AGGTAGTATCTATAATCACT+AGG | - | chr6_2:61109756-61109775 | None:intergenic | 30.0% | |
| TTTCTATACTGTGAAATGGA+AGG | + | chr6_2:61109896-61109915 | Msa0922500:CDS | 30.0% | |
| ! | AATTGATAATCGAAAACCAG+TGG | - | chr6_2:61109995-61110014 | None:intergenic | 30.0% |
| GCAAATACAGATTTGAACTT+GGG | - | chr6_2:61110296-61110315 | None:intergenic | 30.0% | |
| TGCAAATACAGATTTGAACT+TGG | - | chr6_2:61110297-61110316 | None:intergenic | 30.0% | |
| ! | TTTATGCATTTTGTGCAGTA+CGG | + | chr6_2:61110453-61110472 | Msa0922500:intron | 30.0% |
| TACGGTGTTCATATTCATAT+TGG | + | chr6_2:61110471-61110490 | Msa0922500:CDS | 30.0% | |
| ATATTCATATTGGCACTTGT+TGG | + | chr6_2:61110481-61110500 | Msa0922500:CDS | 30.0% | |
| TTGTCGTTATAGTTCTCATA+TGG | + | chr6_2:61110846-61110865 | Msa0922500:CDS | 30.0% | |
| ATTATATATTTGCCAGTGTC+TGG | + | chr6_2:61111059-61111078 | Msa0922500:CDS | 30.0% | |
| TTATATATTTGCCAGTGTCT+GGG | + | chr6_2:61111060-61111079 | Msa0922500:CDS | 30.0% | |
| TGTAGATTGTGTAAATTCTG+TGG | - | chr6_2:61111087-61111106 | None:intergenic | 30.0% | |
| ACTAGTAATACCTAACTAAG+GGG | - | chr6_2:61111282-61111301 | None:intergenic | 30.0% | |
| GTACTAGTAATACCTAACTA+AGG | - | chr6_2:61111284-61111303 | None:intergenic | 30.0% | |
| TGGTTATATCATCAAAGAGA+TGG | - | chr6_2:61111337-61111356 | None:intergenic | 30.0% | |
| CAAGGAAAAATTTGGATTCT+CGG | + | chr6_2:61112001-61112020 | Msa0922500:intron | 30.0% | |
| AAGGAAAAATTTGGATTCTC+GGG | + | chr6_2:61112002-61112021 | Msa0922500:intron | 30.0% | |
| CTTTCATAATGAATCACATG+AGG | + | chr6_2:61112095-61112114 | Msa0922500:intron | 30.0% | |
| !! | ATGCAAACCTCATTTTTCTT+TGG | + | chr6_2:61112295-61112314 | Msa0922500:CDS | 30.0% |
| CATGTATCCAAAGAAAAATG+AGG | - | chr6_2:61112305-61112324 | None:intergenic | 30.0% | |
| !! | CTCATTTTTCTTTGGATACA+TGG | + | chr6_2:61112303-61112322 | Msa0922500:CDS | 30.0% |
| TGTACTATATAAGAGAAGCT+GGG | + | chr6_2:61112500-61112519 | Msa0922500:three_prime_UTR | 30.0% | |
| CACCAAACATAAGATTGAAG+CGG | + | chr6_2:61107762-61107781 | Msa0922500:five_prime_UTR | 35.0% | |
| AAAAGAAGGAAGGTGAAGAT+GGG | - | chr6_2:61107810-61107829 | None:intergenic | 35.0% | |
| AAAAAGAAGGAAGGTGAAGA+TGG | - | chr6_2:61107811-61107830 | None:intergenic | 35.0% | |
| AAAGAGGGAAAAAAGAAGGA+AGG | - | chr6_2:61107820-61107839 | None:intergenic | 35.0% | |
| !! | GGAGTGTGTTGATAATAAAG+AGG | - | chr6_2:61107836-61107855 | None:intergenic | 35.0% |
| GGTTGAATAGAAAAAAGAGG+GGG | - | chr6_2:61107883-61107902 | None:intergenic | 35.0% | |
| GGGTTGAATAGAAAAAAGAG+GGG | - | chr6_2:61107884-61107903 | None:intergenic | 35.0% | |
| GGGGTTGAATAGAAAAAAGA+GGG | - | chr6_2:61107885-61107904 | None:intergenic | 35.0% | |
| TGATGTGAAAATGAAGAGAG+GGG | - | chr6_2:61107905-61107924 | None:intergenic | 35.0% | |
| GTTGATGTGAAAATGAAGAG+AGG | - | chr6_2:61107907-61107926 | None:intergenic | 35.0% | |
| GGATATGAAGAGAGAAGAAA+TGG | - | chr6_2:61108023-61108042 | None:intergenic | 35.0% | |
| ATCTGATGAATCAGATCTGA+CGG | - | chr6_2:61108047-61108066 | None:intergenic | 35.0% | |
| ! | TTGGTCCTTTTCATAATCCA+AGG | + | chr6_2:61108113-61108132 | Msa0922500:CDS | 35.0% |
| !! | TAATATACAAAGCACCGACA+CGG | + | chr6_2:61108291-61108310 | Msa0922500:intron | 35.0% |
| ! | TGATTTTCAGTGAGACGTAT+CGG | + | chr6_2:61108501-61108520 | Msa0922500:intron | 35.0% |
| AACCAACCTGGTATACAAAA+TGG | - | chr6_2:61108539-61108558 | None:intergenic | 35.0% | |
| TTGAAGCAAAAAAACCAACC+TGG | - | chr6_2:61108551-61108570 | None:intergenic | 35.0% | |
| ! | CATTTTATTGCGGGAAATTG+CGG | + | chr6_2:61108662-61108681 | Msa0922500:intron | 35.0% |
| GGGAAAATTGCGGTTAAATA+TGG | + | chr6_2:61108803-61108822 | Msa0922500:intron | 35.0% | |
| TGATCTTGAACATCACATCA+AGG | - | chr6_2:61108896-61108915 | None:intergenic | 35.0% | |
| GCAGGATTTAGCTAACTAAA+TGG | - | chr6_2:61109024-61109043 | None:intergenic | 35.0% | |
| CGTATTCCAACTTCACATAA+TGG | + | chr6_2:61109080-61109099 | Msa0922500:intron | 35.0% | |
| TGAAGTCCATTATGTGAAGT+TGG | - | chr6_2:61109089-61109108 | None:intergenic | 35.0% | |
| ATAAAGAAAGAGACAAAGCG+GGG | - | chr6_2:61109227-61109246 | None:intergenic | 35.0% | |
| TTAGCTACGTATTAGCATAG+TGG | - | chr6_2:61109264-61109283 | None:intergenic | 35.0% | |
| !! | AAAGAGAAGAAAGAAGCACT+GGG | + | chr6_2:61109516-61109535 | Msa0922500:CDS | 35.0% |
| GACACTTACAAAAGAAGAAG+TGG | + | chr6_2:61109626-61109645 | Msa0922500:CDS | 35.0% | |
| ! | AAGAAGAAGTGGCGAATTTT+CGG | + | chr6_2:61109637-61109656 | Msa0922500:CDS | 35.0% |
| !! | TTTCATAGGGAAGGTTGATA+AGG | + | chr6_2:61109719-61109738 | Msa0922500:CDS | 35.0% |
| CAAAATGGATGTGCTTGTAA+AGG | - | chr6_2:61109776-61109795 | None:intergenic | 35.0% | |
| TATTGAGATCAATGTGCGAA+CGG | + | chr6_2:61109821-61109840 | Msa0922500:CDS | 35.0% | |
| ! | TCCTTGTTTGACTTCTAAAC+AGG | + | chr6_2:61110192-61110211 | Msa0922500:intron | 35.0% |
| ACCTGTTTAGAAGTCAAACA+AGG | - | chr6_2:61110196-61110215 | None:intergenic | 35.0% | |
| ! | TATTTTATCCGTACAACCGA+GGG | + | chr6_2:61110506-61110525 | Msa0922500:CDS | 35.0% |
| GTTATATATGCACTCACTTC+AGG | + | chr6_2:61110550-61110569 | Msa0922500:CDS | 35.0% | |
| TACCTCATTCTATTGTCAAC+TGG | + | chr6_2:61110591-61110610 | Msa0922500:CDS | 35.0% | |
| TTCCAGTTGACAATAGAATG+AGG | - | chr6_2:61110596-61110615 | None:intergenic | 35.0% | |
| TCATTCTATTGTCAACTGGA+AGG | + | chr6_2:61110595-61110614 | Msa0922500:CDS | 35.0% | |
| CATGCAAATCTAACTGATAC+TGG | - | chr6_2:61110661-61110680 | None:intergenic | 35.0% | |
| ! | TCGATGTAAATAGCACTGAA+AGG | - | chr6_2:61111034-61111053 | None:intergenic | 35.0% |
| TATATATTTGCCAGTGTCTG+GGG | + | chr6_2:61111061-61111080 | Msa0922500:CDS | 35.0% | |
| TGTTACTGCTTTCATTACTG+TGG | + | chr6_2:61111141-61111160 | Msa0922500:CDS | 35.0% | |
| CTTTCTTGCACCAATTTCTA+TGG | + | chr6_2:61111241-61111260 | Msa0922500:intron | 35.0% | |
| TGTTTATAGTCCCCTTAGTT+AGG | + | chr6_2:61111269-61111288 | Msa0922500:intron | 35.0% | |
| GAAATCAGTTCACTGCTAAA+TGG | - | chr6_2:61111306-61111325 | None:intergenic | 35.0% | |
| !! | GTGGAAAGTGTTAATGTTAG+AGG | - | chr6_2:61111422-61111441 | None:intergenic | 35.0% |
| ! | TCATCAGAACTCATTTTCAG+TGG | - | chr6_2:61111441-61111460 | None:intergenic | 35.0% |
| CCACAAAGTAATCACTAAAC+AGG | - | chr6_2:61111511-61111530 | None:intergenic | 35.0% | |
| CCTGTTTAGTGATTACTTTG+TGG | + | chr6_2:61111508-61111527 | Msa0922500:intron | 35.0% | |
| AGGGGTGATGCATTTATTTA+TGG | + | chr6_2:61111645-61111664 | Msa0922500:intron | 35.0% | |
| !!! | GGGAAACATTCTTGTTTTCA+TGG | + | chr6_2:61111940-61111959 | Msa0922500:intron | 35.0% |
| ! | CGAGAATCCAAATTTTTCCT+TGG | - | chr6_2:61112003-61112022 | None:intergenic | 35.0% |
| !! | CAATTAAACTCAAAGCATCG+TGG | - | chr6_2:61112138-61112157 | None:intergenic | 35.0% |
| ! | GTAAGGAAATAAGAGCACAA+AGG | - | chr6_2:61112185-61112204 | None:intergenic | 35.0% |
| TTGCATGAAACCAGACATAT+CGG | - | chr6_2:61112281-61112300 | None:intergenic | 35.0% | |
| ! | TTTGGTTTCTTCTTGATGCT+TGG | + | chr6_2:61112337-61112356 | Msa0922500:CDS | 35.0% |
| GTGTACTATATAAGAGAAGC+TGG | + | chr6_2:61112499-61112518 | Msa0922500:three_prime_UTR | 35.0% | |
| TATATAAGAGAAGCTGGGTT+GGG | + | chr6_2:61112505-61112524 | Msa0922500:three_prime_UTR | 35.0% | |
| CACCGCTTCAATCTTATGTT+TGG | - | chr6_2:61107767-61107786 | None:intergenic | 40.0% | |
| GGGGGTTGAATAGAAAAAAG+AGG | - | chr6_2:61107886-61107905 | None:intergenic | 40.0% | |
| GATGTGAAAATGAAGAGAGG+GGG | - | chr6_2:61107904-61107923 | None:intergenic | 40.0% | |
| TCATCTTCGCCATTGAAGAT+TGG | - | chr6_2:61107973-61107992 | None:intergenic | 40.0% | |
| AAGAAGGCGAGGATGAATAA+TGG | - | chr6_2:61107998-61108017 | None:intergenic | 40.0% | |
| GAGAGAAGAAATGGAGAAGA+AGG | - | chr6_2:61108014-61108033 | None:intergenic | 40.0% | |
| !!! | GATCTGCCATTTTGTATACC+AGG | + | chr6_2:61108530-61108549 | Msa0922500:CDS | 40.0% |
| !!! | TGCCATTTTGTATACCAGGT+TGG | + | chr6_2:61108534-61108553 | Msa0922500:intron | 40.0% |
| GGGAAATTGCGGTTAAATAC+AGG | + | chr6_2:61108673-61108692 | Msa0922500:intron | 40.0% | |
| TGCTGATGCAATTGTAGTTG+TGG | + | chr6_2:61108830-61108849 | Msa0922500:intron | 40.0% | |
| TTGTAGTTGTGGAGACATCA+TGG | + | chr6_2:61108841-61108860 | Msa0922500:intron | 40.0% | |
| TCATGTAACGGTGTAAATGC+AGG | - | chr6_2:61109042-61109061 | None:intergenic | 40.0% | |
| ! | GGCTGTGAGGATATTTTATG+TGG | + | chr6_2:61109166-61109185 | Msa0922500:intron | 40.0% |
| TAAAGAAAGAGACAAAGCGG+GGG | - | chr6_2:61109226-61109245 | None:intergenic | 40.0% | |
| CTAGACCATCCAATCTTGAT+CGG | - | chr6_2:61109306-61109325 | None:intergenic | 40.0% | |
| ! | TTTGGCAAGTAAATTGGCTC+CGG | - | chr6_2:61109353-61109372 | None:intergenic | 40.0% |
| ! | GAAAGAGAAGAAAGAAGCAC+TGG | + | chr6_2:61109515-61109534 | Msa0922500:CDS | 40.0% |
| !!! | TTTTGGAACTCGAGCTGATA+AGG | - | chr6_2:61109576-61109595 | None:intergenic | 40.0% |
| ! | ACACAGAGTCCTTGTCTTTT+TGG | - | chr6_2:61109593-61109612 | None:intergenic | 40.0% |
| AAAAGACAAGGACTCTGTGT+CGG | + | chr6_2:61109593-61109612 | Msa0922500:CDS | 40.0% | |
| ! | TTGCCTATTTGGGGTTTCAT+AGG | + | chr6_2:61109705-61109724 | Msa0922500:CDS | 40.0% |
| ! | TGCCTATTTGGGGTTTCATA+GGG | + | chr6_2:61109706-61109725 | Msa0922500:CDS | 40.0% |
| TTCCCTATGAAACCCCAAAT+AGG | - | chr6_2:61109711-61109730 | None:intergenic | 40.0% | |
| ! | TATTTGGGGTTTCATAGGGA+AGG | + | chr6_2:61109710-61109729 | Msa0922500:CDS | 40.0% |
| !! | ATAGGGAAGGTTGATAAGGA+GGG | + | chr6_2:61109723-61109742 | Msa0922500:CDS | 40.0% |
| ! | CAGTGGATTTCCAAATGATG+GGG | - | chr6_2:61109978-61109997 | None:intergenic | 40.0% |
| ! | CCAGTGGATTTCCAAATGAT+GGG | - | chr6_2:61109979-61109998 | None:intergenic | 40.0% |
| ! | ACCAGTGGATTTCCAAATGA+TGG | - | chr6_2:61109980-61109999 | None:intergenic | 40.0% |
| TTGCAAGAAAACCAGTCAAG+AGG | - | chr6_2:61110034-61110053 | None:intergenic | 40.0% | |
| AAACAGGTATGCACATGATG+AGG | + | chr6_2:61110208-61110227 | Msa0922500:intron | 40.0% | |
| ! | ACATCCACGGTGATGTTTTT+AGG | + | chr6_2:61110267-61110286 | Msa0922500:intron | 40.0% |
| GAAACCTAAAAACATCACCG+TGG | - | chr6_2:61110274-61110293 | None:intergenic | 40.0% | |
| AACTCACAGGGTAAACAGTT+GGG | - | chr6_2:61110339-61110358 | None:intergenic | 40.0% | |
| AAACTCACAGGGTAAACAGT+TGG | - | chr6_2:61110340-61110359 | None:intergenic | 40.0% | |
| TTTACCCTGTGAGTTTCTTC+TGG | + | chr6_2:61110344-61110363 | Msa0922500:intron | 40.0% | |
| ! | GTATTTTATCCGTACAACCG+AGG | + | chr6_2:61110505-61110524 | Msa0922500:CDS | 40.0% |
| ! | ATTTTATCCGTACAACCGAG+GGG | + | chr6_2:61110507-61110526 | Msa0922500:CDS | 40.0% |
| TCAACTGGAAGGAACAAACT+GGG | + | chr6_2:61110606-61110625 | Msa0922500:CDS | 40.0% | |
| CTTTGTCCGTTTATCATGAC+AGG | + | chr6_2:61110706-61110725 | Msa0922500:intron | 40.0% | |
| TCCGTTTATCATGACAGGTT+CGG | + | chr6_2:61110711-61110730 | Msa0922500:intron | 40.0% | |
| TCCGAACCTGTCATGATAAA+CGG | - | chr6_2:61110715-61110734 | None:intergenic | 40.0% | |
| GTTCGGAATCTACTATTGAC+CGG | + | chr6_2:61110728-61110747 | Msa0922500:CDS | 40.0% | |
| TAACGACAATTGTGCCGAAT+GGG | - | chr6_2:61110835-61110854 | None:intergenic | 40.0% | |
| ATAACGACAATTGTGCCGAA+TGG | - | chr6_2:61110836-61110855 | None:intergenic | 40.0% | |
| TACGTCTCCTCTACTTGTAT+TGG | + | chr6_2:61110877-61110896 | Msa0922500:CDS | 40.0% | |
| ACGTCTCCTCTACTTGTATT+GGG | + | chr6_2:61110878-61110897 | Msa0922500:CDS | 40.0% | |
| TCCGCACAACTAAATATCCA+AGG | + | chr6_2:61110945-61110964 | Msa0922500:CDS | 40.0% | |
| CCCTTGGATATTTAGTTGTG+CGG | - | chr6_2:61110949-61110968 | None:intergenic | 40.0% | |
| CCGCACAACTAAATATCCAA+GGG | + | chr6_2:61110946-61110965 | Msa0922500:CDS | 40.0% | |
| TAGCTGCTGAAGATCATGAA+TGG | + | chr6_2:61111182-61111201 | Msa0922500:CDS | 40.0% | |
| CCAACATCGATCAACTACAT+TGG | - | chr6_2:61111357-61111376 | None:intergenic | 40.0% | |
| CCAATGTAGTTGATCGATGT+TGG | + | chr6_2:61111354-61111373 | Msa0922500:intron | 40.0% | |
| ATGCATACAATTGTTCCTGC+AGG | + | chr6_2:61111713-61111732 | Msa0922500:intron | 40.0% | |
| ACGACTCTAACTCATGAACA+AGG | + | chr6_2:61111919-61111938 | Msa0922500:intron | 40.0% | |
| CGACTCTAACTCATGAACAA+GGG | + | chr6_2:61111920-61111939 | Msa0922500:intron | 40.0% | |
| GGTGCAACCAAGGAAAAATT+TGG | + | chr6_2:61111993-61112012 | Msa0922500:intron | 40.0% | |
| AGCACAAAGGTTAAATGTGC+AGG | - | chr6_2:61112172-61112191 | None:intergenic | 40.0% | |
| CCTTACAGATCATTCCTATG+CGG | + | chr6_2:61112199-61112218 | Msa0922500:intron | 40.0% | |
| GAAGAAACCAAAGCATATGC+AGG | - | chr6_2:61112329-61112348 | None:intergenic | 40.0% | |
| TTCTTGATGCTTGGAACTGT+TGG | + | chr6_2:61112346-61112365 | Msa0922500:CDS | 40.0% | |
| ! | ACTTGATGGATCGGTATATG+TGG | - | chr6_2:61112399-61112418 | None:intergenic | 40.0% |
| CTATATAAGAGAAGCTGGGT+TGG | + | chr6_2:61112504-61112523 | Msa0922500:three_prime_UTR | 40.0% | |
| TGTGATCTAACAAGTTGCTC+TGG | - | chr6_2:61112545-61112564 | None:intergenic | 40.0% | |
| GGTTCATTTGAACGCAATTC+TGG | + | chr6_2:61112638-61112657 | Msa0922500:three_prime_UTR | 40.0% | |
| CTTCGCCATTGAAGATTGGT+TGG | - | chr6_2:61107969-61107988 | None:intergenic | 45.0% | |
| AAGAAATGGAGAAGAAGGCG+AGG | - | chr6_2:61108009-61108028 | None:intergenic | 45.0% | |
| TGATGAATCAGATCTGACGG+TGG | - | chr6_2:61108044-61108063 | None:intergenic | 45.0% | |
| CCAACTTTGTTAGCGAAGAG+AGG | - | chr6_2:61108097-61108116 | None:intergenic | 45.0% | |
| CCTCTCTTCGCTAACAAAGT+TGG | + | chr6_2:61108094-61108113 | Msa0922500:CDS | 45.0% | |
| !! | AACGGATCGAAGAAGTACCT+TGG | - | chr6_2:61108133-61108152 | None:intergenic | 45.0% |
| CGTGGAATGCACGTGAATAA+CGG | - | chr6_2:61108151-61108170 | None:intergenic | 45.0% | |
| ! | CATCTGATCAAAGGCGTATC+CGG | - | chr6_2:61108408-61108427 | None:intergenic | 45.0% |
| ACGCCTTTGATCAGATGTGT+CGG | + | chr6_2:61108411-61108430 | Msa0922500:intron | 45.0% | |
| ACACCGACACATCTGATCAA+AGG | - | chr6_2:61108417-61108436 | None:intergenic | 45.0% | |
| ACTGTTGCATCCTAGTGGTT+TGG | + | chr6_2:61109145-61109164 | Msa0922500:intron | 45.0% | |
| AAAGAAAGAGACAAAGCGGG+GGG | - | chr6_2:61109225-61109244 | None:intergenic | 45.0% | |
| ATGGACCATCCGATCAAGAT+TGG | + | chr6_2:61109294-61109313 | Msa0922500:intron | 45.0% | |
| ACCATCCGATCAAGATTGGA+TGG | + | chr6_2:61109298-61109317 | Msa0922500:intron | 45.0% | |
| ACCATCCAATCTTGATCGGA+TGG | - | chr6_2:61109302-61109321 | None:intergenic | 45.0% | |
| !! | CACTGGGTGAAGTGTTGAAT+GGG | + | chr6_2:61109532-61109551 | Msa0922500:CDS | 45.0% |
| !! | ACTGGGTGAAGTGTTGAATG+GGG | + | chr6_2:61109533-61109552 | Msa0922500:CDS | 45.0% |
| !! | GTGAAGTGTTGAATGGGGAT+AGG | + | chr6_2:61109538-61109557 | Msa0922500:CDS | 45.0% |
| ! | AGTGTTGAATGGGGATAGGT+TGG | + | chr6_2:61109542-61109561 | Msa0922500:CDS | 45.0% |
| GCTCGAGTTCCAAAAAGACA+AGG | + | chr6_2:61109581-61109600 | Msa0922500:CDS | 45.0% | |
| GTAGTAGTCCTTACGAACAG+CGG | - | chr6_2:61109664-61109683 | None:intergenic | 45.0% | |
| !! | CATAGGGAAGGTTGATAAGG+AGG | + | chr6_2:61109722-61109741 | Msa0922500:CDS | 45.0% |
| !! | TAGGGAAGGTTGATAAGGAG+GGG | + | chr6_2:61109724-61109743 | Msa0922500:CDS | 45.0% |
| !! | GTAACATCCACAAGGGCATT+TGG | - | chr6_2:61109849-61109868 | None:intergenic | 45.0% |
| GTCCTCTGTAACATCCACAA+GGG | - | chr6_2:61109856-61109875 | None:intergenic | 45.0% | |
| TGTCCTCTGTAACATCCACA+AGG | - | chr6_2:61109857-61109876 | None:intergenic | 45.0% | |
| ! | CTAACACTCCCTTTGAGAAG+CGG | + | chr6_2:61109922-61109941 | Msa0922500:CDS | 45.0% |
| TTGTCCATCCGCTTCTCAAA+GGG | - | chr6_2:61109933-61109952 | None:intergenic | 45.0% | |
| CCCATCATTTGGAAATCCAC+TGG | + | chr6_2:61109976-61109995 | Msa0922500:CDS | 45.0% | |
| CAAGAAAACCAGTCAAGAGG+AGG | - | chr6_2:61110031-61110050 | None:intergenic | 45.0% | |
| ACTGGCTGGAAATACATCCA+CGG | + | chr6_2:61110254-61110273 | Msa0922500:intron | 45.0% | |
| TCTGTATTTGCAGCAGCTCT+TGG | + | chr6_2:61110305-61110324 | Msa0922500:intron | 45.0% | |
| ATGGCCAGAAGAAACTCACA+GGG | - | chr6_2:61110351-61110370 | None:intergenic | 45.0% | |
| AATGGCCAGAAGAAACTCAC+AGG | - | chr6_2:61110352-61110371 | None:intergenic | 45.0% | |
| GTCAACTGGAAGGAACAAAC+TGG | + | chr6_2:61110605-61110624 | Msa0922500:CDS | 45.0% | |
| GAAATAGAGGCCCACAGAAA+AGG | - | chr6_2:61110757-61110776 | None:intergenic | 45.0% | |
| TCTCCTCTACTTGTATTGGG+AGG | + | chr6_2:61110881-61110900 | Msa0922500:CDS | 45.0% | |
| CTCCTCTACTTGTATTGGGA+GGG | + | chr6_2:61110882-61110901 | Msa0922500:CDS | 45.0% | |
| ATCCCTCCCAATACAAGTAG+AGG | - | chr6_2:61110887-61110906 | None:intergenic | 45.0% | |
| TTGTATTGGGAGGGATTGCT+GGG | + | chr6_2:61110891-61110910 | Msa0922500:CDS | 45.0% | |
| GGATATTTAGTTGTGCGGAC+TGG | - | chr6_2:61110944-61110963 | None:intergenic | 45.0% | |
| TTCCTCCTTTGCCATGGTAT+CGG | + | chr6_2:61110972-61110991 | Msa0922500:CDS | 45.0% | |
| AGCAATTCCTCAGATGGCAA+TGG | + | chr6_2:61110997-61111016 | Msa0922500:CDS | 45.0% | |
| CTGCTGAAGATCATGAATGG+TGG | + | chr6_2:61111185-61111204 | Msa0922500:CDS | 45.0% | |
| CTGAAGATCATGAATGGTGG+TGG | + | chr6_2:61111188-61111207 | Msa0922500:CDS | 45.0% | |
| !! | AAGATCATGAATGGTGGTGG+AGG | + | chr6_2:61111191-61111210 | Msa0922500:CDS | 45.0% |
| !! | TCTGGATTTTGGTGCAACCA+AGG | + | chr6_2:61111983-61112002 | Msa0922500:intron | 45.0% |
| CCGCATAGGAATGATCTGTA+AGG | - | chr6_2:61112202-61112221 | None:intergenic | 45.0% | |
| TACAGATCATTCCTATGCGG+TGG | + | chr6_2:61112202-61112221 | Msa0922500:intron | 45.0% | |
| TGAAACCAGACATATCGGAG+CGG | - | chr6_2:61112276-61112295 | None:intergenic | 45.0% | |
| TACATGGCCTGCATATGCTT+TGG | + | chr6_2:61112319-61112338 | Msa0922500:CDS | 45.0% | |
| GGACAAAGAACAATGCTGCA+CGG | - | chr6_2:61112375-61112394 | None:intergenic | 45.0% | |
| ! | TGATGGATCGGTATATGTGG+CGG | - | chr6_2:61112396-61112415 | None:intergenic | 45.0% |
| AAATGCCTACTCGCACTTGA+TGG | - | chr6_2:61112413-61112432 | None:intergenic | 45.0% | |
| ACGAAAACAGATCCAGCACG+TGG | - | chr6_2:61108169-61108188 | None:intergenic | 50.0% | |
| ! | ATCAAAGGCGTATCCGGTGT+TGG | - | chr6_2:61108402-61108421 | None:intergenic | 50.0% |
| TCCTCACTGTTGCATCCTAG+TGG | + | chr6_2:61109140-61109159 | Msa0922500:intron | 50.0% | |
| ACCACTAGGATGCAACAGTG+AGG | - | chr6_2:61109144-61109163 | None:intergenic | 50.0% | |
| ! | ATCCTAGTGGTTTGGCTGTG+AGG | + | chr6_2:61109153-61109172 | Msa0922500:intron | 50.0% |
| ATCCTCACAGCCAAACCACT+AGG | - | chr6_2:61109158-61109177 | None:intergenic | 50.0% | |
| AAGAAAGAGACAAAGCGGGG+GGG | - | chr6_2:61109224-61109243 | None:intergenic | 50.0% | |
| CAACAACGTGATTGCGTGAC+CGG | + | chr6_2:61109331-61109350 | Msa0922500:intron | 50.0% | |
| !! | GCACTGGGTGAAGTGTTGAA+TGG | + | chr6_2:61109531-61109550 | Msa0922500:CDS | 50.0% |
| ! | TTTTCGGTCCGCTGTTCGTA+AGG | + | chr6_2:61109653-61109672 | Msa0922500:CDS | 50.0% |
| AACGGATCCAAATGCCCTTG+TGG | + | chr6_2:61109839-61109858 | Msa0922500:CDS | 50.0% | |
| TGCCCTTGTGGATGTTACAG+AGG | + | chr6_2:61109851-61109870 | Msa0922500:CDS | 50.0% | |
| CTTGTCCATCCGCTTCTCAA+AGG | - | chr6_2:61109934-61109953 | None:intergenic | 50.0% | |
| ! | AAATGATGGGGTAGCGAGGA+CGG | - | chr6_2:61109966-61109985 | None:intergenic | 50.0% |
| ! | TTCCAAATGATGGGGTAGCG+AGG | - | chr6_2:61109970-61109989 | None:intergenic | 50.0% |
| ACATGATGAGGAGACTGCAG+AGG | + | chr6_2:61110220-61110239 | Msa0922500:intron | 50.0% | |
| TTTGCAGCAGCTCTTGGATC+TGG | + | chr6_2:61110311-61110330 | Msa0922500:intron | 50.0% | |
| AATAGAGCCCCTCGGTTGTA+CGG | - | chr6_2:61110517-61110536 | None:intergenic | 50.0% | |
| GCACTCACTTCAGGAATTGC+TGG | + | chr6_2:61110559-61110578 | Msa0922500:CDS | 50.0% | |
| ! | TTGACCGGATGCCTTTTCTG+TGG | + | chr6_2:61110743-61110762 | Msa0922500:CDS | 50.0% |
| ! | TGACCGGATGCCTTTTCTGT+GGG | + | chr6_2:61110744-61110763 | Msa0922500:CDS | 50.0% |
| AATTGTGCCGAATGGGAGAG+CGG | - | chr6_2:61110828-61110847 | None:intergenic | 50.0% | |
| CTTGTATTGGGAGGGATTGC+TGG | + | chr6_2:61110890-61110909 | Msa0922500:CDS | 50.0% | |
| GATTGCTGGGAAGAACAGCA+AGG | + | chr6_2:61110904-61110923 | Msa0922500:CDS | 50.0% | |
| TCCTCCTTTGCCATGGTATC+GGG | + | chr6_2:61110973-61110992 | Msa0922500:CDS | 50.0% | |
| ATTCCTCAGATGGCAATGGC+AGG | + | chr6_2:61111001-61111020 | Msa0922500:CDS | 50.0% | |
| AATCCTGCCATTGCCATCTG+AGG | - | chr6_2:61111007-61111026 | None:intergenic | 50.0% | |
| CATGATCTTCAGCAGCTAGC+TGG | - | chr6_2:61111180-61111199 | None:intergenic | 50.0% | |
| AATAGACTCTCGAGTCCTGC+AGG | - | chr6_2:61111731-61111750 | None:intergenic | 50.0% | |
| TTCCTATGCGGTGGTTCAAC+TGG | + | chr6_2:61112211-61112230 | Msa0922500:CDS | 50.0% | |
| ATCCAGTTGAACCACCGCAT+AGG | - | chr6_2:61112216-61112235 | None:intergenic | 50.0% | |
| GAAACCAGACATATCGGAGC+GGG | - | chr6_2:61112275-61112294 | None:intergenic | 50.0% | |
| ! | CCTACTCGCACTTGATGGAT+CGG | - | chr6_2:61112408-61112427 | None:intergenic | 50.0% |
| ! | ATAAGAGAAGCTGGGTTGGG+TGG | + | chr6_2:61112508-61112527 | Msa0922500:three_prime_UTR | 50.0% |
| ! | TAAGAGAAGCTGGGTTGGGT+GGG | + | chr6_2:61112509-61112528 | Msa0922500:three_prime_UTR | 50.0% |
| TTCACGTGCATTCCACGTGC+TGG | + | chr6_2:61108154-61108173 | Msa0922500:intron | 55.0% | |
| TCCAGTGTCTGTGTCCGTGT+CGG | - | chr6_2:61108308-61108327 | None:intergenic | 55.0% | |
| ! | CACTCCCTTTGAGAAGCGGA+TGG | + | chr6_2:61109926-61109945 | Msa0922500:CDS | 55.0% |
| GTCCTCGCTACCCCATCATT+TGG | + | chr6_2:61109965-61109984 | Msa0922500:CDS | 55.0% | |
| GTCACAGTCCTCCTCTTGAC+TGG | + | chr6_2:61110020-61110039 | Msa0922500:CDS | 55.0% | |
| TGAGGAGACTGCAGAGGATC+AGG | + | chr6_2:61110226-61110245 | Msa0922500:intron | 55.0% | |
| GCAGAGGATCAGGAAGAGAC+TGG | + | chr6_2:61110236-61110255 | Msa0922500:intron | 55.0% | |
| AGGATCAGGAAGAGACTGGC+TGG | + | chr6_2:61110240-61110259 | Msa0922500:intron | 55.0% | |
| GTGCAGTGAATAGAGCCCCT+CGG | - | chr6_2:61110525-61110544 | None:intergenic | 55.0% | |
| !! | AGGCCCACAGAAAAGGCATC+CGG | - | chr6_2:61110750-61110769 | None:intergenic | 55.0% |
| !! | TAGTTGTGCGGACTGGAGCT+TGG | - | chr6_2:61110937-61110956 | None:intergenic | 55.0% |
| GGCAAAGGAGGAATCTCCCT+TGG | - | chr6_2:61110965-61110984 | None:intergenic | 55.0% | |
| GGGAGATTCCTCCTTTGCCA+TGG | + | chr6_2:61110966-61110985 | Msa0922500:CDS | 55.0% | |
| CCTCCTTTGCCATGGTATCG+GGG | + | chr6_2:61110974-61110993 | Msa0922500:CDS | 55.0% | |
| GGAATTGCTCCCCGATACCA+TGG | - | chr6_2:61110986-61111005 | None:intergenic | 55.0% | |
| TCGGGGAGCAATTCCTCAGA+TGG | + | chr6_2:61110991-61111010 | Msa0922500:CDS | 55.0% | |
| AATTCTGTGGCCCCAGACAC+TGG | - | chr6_2:61111074-61111093 | None:intergenic | 55.0% | |
| TATGCCCGCTCCGATATGTC+TGG | + | chr6_2:61112268-61112287 | Msa0922500:CDS | 55.0% | |
| CCGATCCATCAAGTGCGAGT+AGG | + | chr6_2:61112405-61112424 | Msa0922500:CDS | 55.0% | |
| ACCGACACGGACACAGACAC+TGG | + | chr6_2:61108304-61108323 | Msa0922500:intron | 60.0% | |
| GTCGTGTCCGTGTCCAACAC+CGG | + | chr6_2:61108386-61108405 | Msa0922500:intron | 60.0% | |
| ! | GGCGTATCCGGTGTTGGACA+CGG | - | chr6_2:61108396-61108415 | None:intergenic | 60.0% |
| GGGGGGAAATGTGGTGACTC+AGG | - | chr6_2:61109207-61109226 | None:intergenic | 60.0% | |
| GACAAAGCGGGGGGGAAATG+TGG | - | chr6_2:61109216-61109235 | None:intergenic | 60.0% | |
| GCTACTGCCGCTCTCCCATT+CGG | + | chr6_2:61110818-61110837 | Msa0922500:CDS | 60.0% | |
| CCCCGATACCATGGCAAAGG+AGG | - | chr6_2:61110977-61110996 | None:intergenic | 60.0% | |
| GCTCCCCGATACCATGGCAA+AGG | - | chr6_2:61110980-61110999 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 61107754 | 61112697 | 61107754 | ID=Msa0922500;Name=Msa0922500 |
| chr6_2 | mRNA | 61107754 | 61112697 | 61107754 | ID=Msa0922500-mRNA-1;Parent=Msa0922500;Name=Msa0922500-mRNA-1;_AED=0.04;_eAED=0.04;_QI=226|0.8|1|1|1|1|6|271|546 |
| chr6_2 | exon | 61107754 | 61108134 | 61107754 | ID=Msa0922500-mRNA-1:exon:9434;Parent=Msa0922500-mRNA-1 |
| chr6_2 | exon | 61108511 | 61108551 | 61108511 | ID=Msa0922500-mRNA-1:exon:9435;Parent=Msa0922500-mRNA-1 |
| chr6_2 | exon | 61109508 | 61110090 | 61109508 | ID=Msa0922500-mRNA-1:exon:9436;Parent=Msa0922500-mRNA-1 |
| chr6_2 | exon | 61110471 | 61110627 | 61110471 | ID=Msa0922500-mRNA-1:exon:9437;Parent=Msa0922500-mRNA-1 |
| chr6_2 | exon | 61110728 | 61111212 | 61110728 | ID=Msa0922500-mRNA-1:exon:9438;Parent=Msa0922500-mRNA-1 |
| chr6_2 | exon | 61112207 | 61112697 | 61112207 | ID=Msa0922500-mRNA-1:exon:9439;Parent=Msa0922500-mRNA-1 |
| chr6_2 | five_prime_UTR | 61107754 | 61107979 | 61107754 | ID=Msa0922500-mRNA-1:five_prime_utr;Parent=Msa0922500-mRNA-1 |
| chr6_2 | CDS | 61107980 | 61108134 | 61107980 | ID=Msa0922500-mRNA-1:cds;Parent=Msa0922500-mRNA-1 |
| chr6_2 | CDS | 61108511 | 61108551 | 61108511 | ID=Msa0922500-mRNA-1:cds;Parent=Msa0922500-mRNA-1 |
| chr6_2 | CDS | 61109508 | 61110090 | 61109508 | ID=Msa0922500-mRNA-1:cds;Parent=Msa0922500-mRNA-1 |
| chr6_2 | CDS | 61110471 | 61110627 | 61110471 | ID=Msa0922500-mRNA-1:cds;Parent=Msa0922500-mRNA-1 |
| chr6_2 | CDS | 61110728 | 61111212 | 61110728 | ID=Msa0922500-mRNA-1:cds;Parent=Msa0922500-mRNA-1 |
| chr6_2 | CDS | 61112207 | 61112426 | 61112207 | ID=Msa0922500-mRNA-1:cds;Parent=Msa0922500-mRNA-1 |
| chr6_2 | three_prime_UTR | 61112427 | 61112697 | 61112427 | ID=Msa0922500-mRNA-1:three_prime_utr;Parent=Msa0922500-mRNA-1 |
| Gene Sequence |
| Protein sequence |
