Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0899090 | XP_013453045.1 | 97.564 | 698 | 17 | 0 | 1 | 698 | 1 | 698 | 0.0 | 1414 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0899090 | sp|P80035|LIPG_CANLF | 28.084 | 381 | 228 | 13 | 289 | 657 | 32 | 378 | 5.67e-27 | 117 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0899090 | A0A072UDA9 | 97.564 | 698 | 17 | 0 | 1 | 698 | 1 | 698 | 0.0 | 1414 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0899090 | Msa0927880 | 0.972606 | 4.853492e-135 | -8.615850e-47 |
| Msa0899090 | Msa0964630 | 0.883771 | 3.383525e-71 | -8.615850e-47 |
| Msa0899090 | Msa1239520 | -0.848917 | 4.515218e-60 | -8.615850e-47 |
| Msa0899090 | Msa1280870 | -0.838465 | 2.830664e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0899090 | MtrunA17_Chr6g0484931 | 97.564 | 698 | 17 | 0 | 1 | 698 | 1 | 698 | 0.0 | 1414 |
| Msa0899090 | MtrunA17_Chr8g0390731 | 74.037 | 701 | 171 | 5 | 2 | 693 | 1 | 699 | 0.0 | 1040 |
| Msa0899090 | MtrunA17_Chr7g0250081 | 25.310 | 403 | 249 | 14 | 270 | 657 | 22 | 387 | 6.59e-18 | 86.7 |
| Msa0899090 | MtrunA17_Chr5g0438751 | 24.484 | 339 | 194 | 11 | 292 | 614 | 43 | 335 | 2.34e-15 | 79.0 |
| Msa0899090 | MtrunA17_Chr3g0120041 | 34.043 | 141 | 81 | 4 | 274 | 408 | 36 | 170 | 8.67e-15 | 75.1 |
| Msa0899090 | MtrunA17_Chr6g0459381 | 33.333 | 123 | 72 | 2 | 292 | 404 | 47 | 169 | 5.99e-14 | 72.8 |
| Msa0899090 | MtrunA17_Chr6g0459361 | 30.370 | 135 | 83 | 3 | 292 | 416 | 47 | 180 | 8.26e-14 | 72.0 |
| Msa0899090 | MtrunA17_Chr3g0119931 | 30.822 | 146 | 94 | 3 | 270 | 408 | 21 | 166 | 1.31e-13 | 71.2 |
| Msa0899090 | MtrunA17_Chr6g0462811 | 28.276 | 145 | 91 | 2 | 286 | 417 | 39 | 183 | 8.63e-13 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0899090 | AT1G73920.1 | 67.149 | 691 | 216 | 5 | 2 | 683 | 1 | 689 | 0.0 | 934 |
| Msa0899090 | AT1G18460.1 | 67.599 | 679 | 215 | 5 | 2 | 676 | 1 | 678 | 0.0 | 912 |
| Msa0899090 | AT1G73920.2 | 65.595 | 622 | 203 | 5 | 71 | 683 | 1 | 620 | 0.0 | 815 |
| Msa0899090 | AT5G14180.1 | 25.897 | 390 | 217 | 14 | 292 | 654 | 52 | 396 | 1.21e-19 | 92.4 |
| Msa0899090 | AT5G14180.3 | 35.714 | 126 | 71 | 2 | 292 | 407 | 52 | 177 | 2.28e-17 | 84.0 |
| Msa0899090 | AT5G14180.5 | 35.714 | 126 | 71 | 2 | 292 | 407 | 52 | 177 | 2.72e-17 | 83.6 |
| Msa0899090 | AT2G15230.1 | 30.534 | 131 | 86 | 2 | 292 | 417 | 33 | 163 | 6.97e-14 | 74.7 |
Find 156 sgRNAs with CRISPR-Local
Find 536 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCACTTTGATTCTGATTC+TGG | 0.083657 | 6_1:+93869160 | Msa0899090:five_prime_UTR |
| CATATTCTTGGATTTGTTAT+TGG | 0.160265 | 6_1:+93869209 | Msa0899090:five_prime_UTR |
| CCTCCAAATGAGAAAGAAAA+TGG | 0.206110 | 6_1:-93875856 | None:intergenic |
| CTATCTCCCTCAAAAGCTTT+TGG | 0.241599 | 6_1:+93871406 | Msa0899090:CDS |
| TCGAATTGGGTTGGAGTTCT+AGG | 0.244055 | 6_1:+93875189 | Msa0899090:CDS |
| TGATGGATACATTCTTCTTT+TGG | 0.284998 | 6_1:+93871739 | Msa0899090:CDS |
| CAGGAGCCATAAAAGTTAAT+AGG | 0.317849 | 6_1:-93875020 | None:intergenic |
| TGTGCAATTTCACATAGTTT+AGG | 0.325533 | 6_1:+93874865 | Msa0899090:CDS |
| TAGTGTCTCTTTACCATTGA+AGG | 0.327552 | 6_1:-93875438 | None:intergenic |
| CAGAAAGTTCATGGATGAAT+TGG | 0.334442 | 6_1:-93870730 | None:intergenic |
| TCTCGGAAACTTTCGTGGTT+TGG | 0.338900 | 6_1:+93874574 | Msa0899090:CDS |
| TTCACTTTGATTCTGATTCT+GGG | 0.348861 | 6_1:+93869161 | Msa0899090:five_prime_UTR |
| TCGTTCAGTTGGGTATCTAA+TGG | 0.352967 | 6_1:+93874413 | Msa0899090:intron |
| ACAATAGGCATCAGATGAAT+TGG | 0.356512 | 6_1:+93870876 | Msa0899090:CDS |
| ACTTCCTTAACCTCATTGAT+TGG | 0.356792 | 6_1:+93876011 | Msa0899090:three_prime_UTR |
| TCGGTTTCCTCCTCGATATC+AGG | 0.362479 | 6_1:-93874820 | None:intergenic |
| TCAACCAAACGTTGCATCAT+AGG | 0.363541 | 6_1:-93869288 | None:intergenic |
| AAAATACTTGAAGGTATTCA+TGG | 0.366247 | 6_1:+93870462 | Msa0899090:CDS |
| CTCATTTACATGCATATAAG+AGG | 0.369236 | 6_1:+93871026 | Msa0899090:CDS |
| TTCACCTGAGCCTTTGGACT+TGG | 0.369633 | 6_1:+93875347 | Msa0899090:CDS |
| ATTCCTGTTGATCTTGTTGC+TGG | 0.373816 | 6_1:+93875393 | Msa0899090:CDS |
| CAGAATCCACAGAAAGTTCA+TGG | 0.379887 | 6_1:-93870739 | None:intergenic |
| TTAGCTTGATGCTTTGAATT+CGG | 0.384662 | 6_1:-93875588 | None:intergenic |
| ACACGACAAAATAAGCTAAC+TGG | 0.389230 | 6_1:-93870967 | None:intergenic |
| TTACGGTTCACCTGAGCCTT+TGG | 0.391024 | 6_1:+93875341 | Msa0899090:CDS |
| TGGGTATCTAATGGTGTTGT+TGG | 0.397650 | 6_1:+93874422 | Msa0899090:CDS |
| TGATCATAGGCTGCAAAAGC+TGG | 0.399372 | 6_1:-93874449 | None:intergenic |
| TTATACAGTCGTTGTCGAAC+TGG | 0.403548 | 6_1:+93875677 | Msa0899090:three_prime_UTR |
| AAAATGATTCTACAAAGGTT+TGG | 0.406399 | 6_1:+93876076 | Msa0899090:three_prime_UTR |
| TTGGCGGAGACAGCTCGAAT+TGG | 0.406733 | 6_1:+93875175 | Msa0899090:CDS |
| AAGTTCAGAATGTTTGATTA+CGG | 0.408672 | 6_1:+93875294 | Msa0899090:CDS |
| TAAGCCTATGATGCAACGTT+TGG | 0.409906 | 6_1:+93869284 | Msa0899090:exon |
| TTACCCAATCAATGAGGTTA+AGG | 0.410325 | 6_1:-93876015 | None:intergenic |
| ACTTTCGTGGTTTGGTTTCA+AGG | 0.414993 | 6_1:+93874582 | Msa0899090:CDS |
| AAATAACAAACCTTGATCAT+AGG | 0.415943 | 6_1:-93874462 | None:intergenic |
| CACTTTGATTCATTCATTGT+TGG | 0.421673 | 6_1:+93875788 | Msa0899090:three_prime_UTR |
| TGCTTGTCTTTAAGTTAGCT+CGG | 0.427376 | 6_1:+93875094 | Msa0899090:CDS |
| AAATCCAAAGTAAGATGTAT+TGG | 0.427748 | 6_1:-93870901 | None:intergenic |
| CTTCCTTAACCTCATTGATT+GGG | 0.429650 | 6_1:+93876012 | Msa0899090:three_prime_UTR |
| GGATCCAATACATCTTACTT+TGG | 0.434141 | 6_1:+93870897 | Msa0899090:CDS |
| TTGTATCATGTATGTATGTA+TGG | 0.434569 | 6_1:+93875940 | Msa0899090:three_prime_UTR |
| TGTCCAGCAACAAGATCAAC+AGG | 0.438552 | 6_1:-93875396 | None:intergenic |
| ACTTGAAGGTATTCATGGTT+GGG | 0.442818 | 6_1:+93870467 | Msa0899090:CDS |
| TGGCGGAGACAGCTCGAATT+GGG | 0.443832 | 6_1:+93875176 | Msa0899090:CDS |
| GTATCTAGCAAAAGCGGCTT+CGG | 0.445272 | 6_1:-93870855 | None:intergenic |
| AATCAAAGAGTTGAAAAGTC+AGG | 0.450322 | 6_1:+93875609 | Msa0899090:CDS |
| CAAAGTTATAAGACCTTCAA+TGG | 0.454362 | 6_1:+93875425 | Msa0899090:CDS |
| CCCTAGCGTGGCTGTAGAAA+CGG | 0.465751 | 6_1:-93871500 | None:intergenic |
| GGCACAACACGAGACAAAAC+AGG | 0.466693 | 6_1:-93875039 | None:intergenic |
| TACTTGAAGGTATTCATGGT+TGG | 0.468562 | 6_1:+93870466 | Msa0899090:CDS |
| TTTCTCATTTGGAGGAAAAG+TGG | 0.472194 | 6_1:+93875864 | Msa0899090:three_prime_UTR |
| GAAACGGATGCATCCACAAC+AGG | 0.473662 | 6_1:-93871484 | None:intergenic |
| GGAAATGCTAAAATACTTGA+AGG | 0.473821 | 6_1:+93870453 | Msa0899090:CDS |
| GTTAGAGTCATCATGAAAAC+CGG | 0.481511 | 6_1:-93874974 | None:intergenic |
| CACAGACACACGTACATGTC+AGG | 0.483114 | 6_1:+93871573 | Msa0899090:CDS |
| AGGTTTAATAAGCTTCAATT+CGG | 0.483593 | 6_1:-93874800 | None:intergenic |
| TCACCTGAGCCTTTGGACTT+GGG | 0.487236 | 6_1:+93875348 | Msa0899090:CDS |
| ACTCTAATGAGCTATGTTGT+TGG | 0.488393 | 6_1:+93875156 | Msa0899090:CDS |
| CAGGATGTCATAACAGATCT+CGG | 0.489128 | 6_1:+93871592 | Msa0899090:CDS |
| TCTATCACTATCTTCTTCTC+CGG | 0.489183 | 6_1:-93870789 | None:intergenic |
| AGTCATTGAACAATATCGTT+AGG | 0.491930 | 6_1:+93870388 | Msa0899090:CDS |
| ATGGATGAATTGGTTGAAAG+AGG | 0.499514 | 6_1:-93870720 | None:intergenic |
| GCTCTAGAACTATGAGATGC+AGG | 0.505141 | 6_1:-93870830 | None:intergenic |
| ATCGTGGAAGCCGTGGCCCT+CGG | 0.506140 | 6_1:-93870506 | None:intergenic |
| TCCGTTTCTACAGCCACGCT+AGG | 0.507006 | 6_1:+93871499 | Msa0899090:CDS |
| CTTTCGTGGTTTGGTTTCAA+GGG | 0.507727 | 6_1:+93874583 | Msa0899090:CDS |
| CGTTTGGTTGATCATGCCAT+TGG | 0.512342 | 6_1:+93869300 | Msa0899090:CDS |
| GTATATCTCGGAAACTTTCG+TGG | 0.513258 | 6_1:+93874569 | Msa0899090:CDS |
| AGCGTGGAATACTCATCATC+CGG | 0.513656 | 6_1:+93870770 | Msa0899090:CDS |
| GAGTCATCATGAAAACCGGC+TGG | 0.514911 | 6_1:-93874970 | None:intergenic |
| GCTTGTCTTTAAGTTAGCTC+GGG | 0.515313 | 6_1:+93875095 | Msa0899090:CDS |
| GAACTATGAGATGCAGGAGA+TGG | 0.519055 | 6_1:-93870824 | None:intergenic |
| ATCCTCAGCAATAATTTCAC+AGG | 0.519989 | 6_1:-93870929 | None:intergenic |
| AATATCGTTAGGATAATCAA+TGG | 0.520891 | 6_1:+93870399 | Msa0899090:CDS |
| TGAATGAATCAAAGTGGCTC+CGG | 0.522301 | 6_1:-93875781 | None:intergenic |
| TGAACCGTAAGCCATTCTAT+TGG | 0.524672 | 6_1:-93875328 | None:intergenic |
| AAACGCATCTGCCAATAGAA+TGG | 0.525486 | 6_1:+93875317 | Msa0899090:CDS |
| TAAGAGGATGCAAAGTATCA+AGG | 0.527135 | 6_1:+93871042 | Msa0899090:CDS |
| GCAATTTCACATAGTTTAGG+AGG | 0.527865 | 6_1:+93874868 | Msa0899090:CDS |
| TATGATAGAGAAAATCCATC+AGG | 0.533839 | 6_1:+93874768 | Msa0899090:CDS |
| ATTCATCCATGAACTTTCTG+TGG | 0.535459 | 6_1:+93870733 | Msa0899090:CDS |
| GTTGAAAAGTCAGGGCAGAA+AGG | 0.536466 | 6_1:+93875618 | Msa0899090:CDS |
| CTATGAGATGCAGGAGATGG+AGG | 0.540106 | 6_1:-93870821 | None:intergenic |
| CTTCATACCCTACCTGCGGT+TGG | 0.543648 | 6_1:+93875120 | Msa0899090:CDS |
| CTTGTAAAGCTGATCGTCAT+CGG | 0.543956 | 6_1:-93874839 | None:intergenic |
| CCGTTTCTACAGCCACGCTA+GGG | 0.546585 | 6_1:+93871500 | Msa0899090:CDS |
| TAGTCCTCCAACCGCAGGTA+GGG | 0.550562 | 6_1:-93875127 | None:intergenic |
| CTTGCACAGATTATGCGTGT+TGG | 0.550806 | 6_1:+93875270 | Msa0899090:CDS |
| TTCCTGTGAAATTATTGCTG+AGG | 0.551646 | 6_1:+93870927 | Msa0899090:CDS |
| TCCATCCATCGTGGAAGCCG+TGG | 0.553998 | 6_1:-93870513 | None:intergenic |
| CGAGTAGGTATATAGAATGC+AGG | 0.554253 | 6_1:-93875060 | None:intergenic |
| CACGCATAATCTGTGCAAGA+TGG | 0.555025 | 6_1:-93875266 | None:intergenic |
| GTTAAACAGGATCTTCATCT+CGG | 0.556822 | 6_1:+93871325 | Msa0899090:intron |
| ATTAATGTGATCACTGCTGA+TGG | 0.558444 | 6_1:+93871722 | Msa0899090:CDS |
| CGGATCAACAAGAAGCAAGC+GGG | 0.558889 | 6_1:-93875568 | None:intergenic |
| CAGAATCAAAGTGAAAATGA+AGG | 0.559486 | 6_1:-93869153 | None:intergenic |
| TTACCCAAGTCCAAAGGCTC+AGG | 0.560869 | 6_1:-93875351 | None:intergenic |
| CTAATGAGCTATGTTGTTGG+CGG | 0.561868 | 6_1:+93875159 | Msa0899090:CDS |
| AGGATGTCATAACAGATCTC+GGG | 0.563730 | 6_1:+93871593 | Msa0899090:CDS |
| TTATATGCATGTAAATGAGA+AGG | 0.567495 | 6_1:-93871022 | None:intergenic |
| ATCAAAGAGTTGAAAAGTCA+GGG | 0.571506 | 6_1:+93875610 | Msa0899090:CDS |
| TACAACATGAACGACATGCC+AGG | 0.573572 | 6_1:+93875222 | Msa0899090:CDS |
| GACCAACTTTCCGAGGGCCA+CGG | 0.577991 | 6_1:+93870496 | Msa0899090:CDS |
| GCAGGGTATGATGTATATCT+CGG | 0.578007 | 6_1:+93874557 | Msa0899090:intron |
| ATCACATTAATAGCTTCGTA+AGG | 0.578156 | 6_1:-93871710 | None:intergenic |
| AGTCATCATGAAAACCGGCT+GGG | 0.578828 | 6_1:-93874969 | None:intergenic |
| TATATGCATGTAAATGAGAA+GGG | 0.580978 | 6_1:-93871021 | None:intergenic |
| GCATAATCTGTGCAAGATGG+AGG | 0.581573 | 6_1:-93875263 | None:intergenic |
| GTCATCATGAAAACCGGCTG+GGG | 0.584386 | 6_1:-93874968 | None:intergenic |
| TCTGCCAATAGAATGGCTTA+CGG | 0.587022 | 6_1:+93875324 | Msa0899090:CDS |
| CCTATTGTATCTAGCAAAAG+CGG | 0.589210 | 6_1:-93870861 | None:intergenic |
| GTTTCTCTCTAGAGATGCAT+AGG | 0.590316 | 6_1:-93870997 | None:intergenic |
| TCTAGCAAAAGCGGCTTCGG+AGG | 0.591771 | 6_1:-93870852 | None:intergenic |
| TTGGACTTGGGTAAACACTA+CGG | 0.592350 | 6_1:+93875360 | Msa0899090:CDS |
| AAAATATCAGCTGATCCACT+CGG | 0.596243 | 6_1:-93875708 | None:intergenic |
| GAACTCAGACCAACTTTCCG+AGG | 0.597430 | 6_1:+93870489 | Msa0899090:CDS |
| GGAGACAGCTCGAATTGGGT+TGG | 0.598684 | 6_1:+93875180 | Msa0899090:CDS |
| ATTATACGAAACATTTACAC+CGG | 0.599314 | 6_1:-93875478 | None:intergenic |
| GCAACACGAAAAGACACTCC+TGG | 0.602713 | 6_1:-93875240 | None:intergenic |
| ACAAGATGTAGCTAACAAGT+AGG | 0.603272 | 6_1:+93875641 | Msa0899090:CDS |
| CAACAATGAATGAATCAAAG+TGG | 0.606227 | 6_1:-93875787 | None:intergenic |
| CATAATCTGTGCAAGATGGA+GGG | 0.606691 | 6_1:-93875262 | None:intergenic |
| GAGGGCCACGGCTTCCACGA+TGG | 0.609215 | 6_1:+93870508 | Msa0899090:CDS |
| TGAACTAGTCCTCCAACCGC+AGG | 0.610142 | 6_1:-93875132 | None:intergenic |
| TATGAGATGCAGGAGATGGA+GGG | 0.613011 | 6_1:-93870820 | None:intergenic |
| TGTCTTCGATGTTGTTCACA+AGG | 0.613624 | 6_1:+93871369 | Msa0899090:CDS |
| TAGAAGACGCGGCATTGTAG+AGG | 0.613913 | 6_1:+93871090 | Msa0899090:CDS |
| TACAGATTGATGAAAAGTGC+CGG | 0.614716 | 6_1:+93875459 | Msa0899090:CDS |
| CTAGTCCTCCAACCGCAGGT+AGG | 0.625336 | 6_1:-93875128 | None:intergenic |
| CGAAAAGTACCTGAGTAGAG+AGG | 0.627676 | 6_1:-93875749 | None:intergenic |
| ACAACAGTTCCTCTCTACTC+AGG | 0.628609 | 6_1:+93875740 | Msa0899090:three_prime_UTR |
| TAGTGTTTACCCAAGTCCAA+AGG | 0.630104 | 6_1:-93875357 | None:intergenic |
| GAAGCATTACCCAATCAATG+AGG | 0.631572 | 6_1:-93876021 | None:intergenic |
| GCTTATTAAACCTGATATCG+AGG | 0.631937 | 6_1:+93874810 | Msa0899090:CDS |
| CATACGACAAGAGTTCTTCG+CGG | 0.638947 | 6_1:-93875539 | None:intergenic |
| CGTTTCTACAGCCACGCTAG+GGG | 0.639718 | 6_1:+93871501 | Msa0899090:CDS |
| ATCAATCTTGAAAGTCTGTG+TGG | 0.641093 | 6_1:-93874937 | None:intergenic |
| AGTTAATAGGATCTCTGCCG+CGG | 0.642174 | 6_1:-93875007 | None:intergenic |
| AACTCAGACCAACTTTCCGA+GGG | 0.645180 | 6_1:+93870490 | Msa0899090:CDS |
| TATCATGTATGTATGTATGG+TGG | 0.654366 | 6_1:+93875943 | Msa0899090:three_prime_UTR |
| TCGGATCAACAAGAAGCAAG+CGG | 0.654478 | 6_1:-93875569 | None:intergenic |
| GGATTCTGATAACTCAAGCG+TGG | 0.655041 | 6_1:+93870754 | Msa0899090:CDS |
| AATCAATGAGCACGGTACTG+AGG | 0.658075 | 6_1:+93874735 | Msa0899090:CDS |
| CAGTACTCAATCAATGAGCA+CGG | 0.665483 | 6_1:+93874727 | Msa0899090:CDS |
| AAGGCCCTGCATCTTCTGAG+AGG | 0.667295 | 6_1:+93871527 | Msa0899090:CDS |
| TTACTCTTTAGAGACACCAA+TGG | 0.670927 | 6_1:-93869316 | None:intergenic |
| GTTTCTACAGCCACGCTAGG+GGG | 0.671376 | 6_1:+93871502 | Msa0899090:CDS |
| GGATCTTCATACCCTACCTG+CGG | 0.679155 | 6_1:+93875116 | Msa0899090:CDS |
| CCTTACTTCTCCATCCATCG+TGG | 0.686622 | 6_1:-93870522 | None:intergenic |
| TAATGTATGTTATTACACGA+AGG | 0.691379 | 6_1:+93874902 | Msa0899090:CDS |
| CGTGCTACTGATAGAAGACG+CGG | 0.693377 | 6_1:+93871079 | Msa0899090:CDS |
| ATGTCGTTCATGTTGTAGTG+AGG | 0.701401 | 6_1:-93875216 | None:intergenic |
| TATTAAACCTGATATCGAGG+AGG | 0.708938 | 6_1:+93874813 | Msa0899090:CDS |
| GCTAACTGGAGAAGACGAAG+CGG | 0.724335 | 6_1:-93870953 | None:intergenic |
| GTCTTCTATCAGTAGCACGA+TGG | 0.727273 | 6_1:-93871075 | None:intergenic |
| GAACTGGAAAGTTAGCCGAG+TGG | 0.747484 | 6_1:+93875693 | Msa0899090:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAAATTTGAATGTTTAAT+TGG | + | chr6_1:93869745-93869764 | Msa0899090:intron | 10.0% |
| !! | TAATTAGATTATTATGAAGA+GGG | + | chr6_1:93869471-93869490 | Msa0899090:intron | 15.0% |
| !! | ATAAGAATTAAGAATATGTT+TGG | + | chr6_1:93869515-93869534 | Msa0899090:intron | 15.0% |
| !!! | ATTGATAATCTAAAAGATTT+TGG | + | chr6_1:93869875-93869894 | Msa0899090:intron | 15.0% |
| !!! | TTAAATCTTGAATTATTTTC+AGG | - | chr6_1:93869998-93870017 | None:intergenic | 15.0% |
| !!! | GTAAAATTATTTTGTTAAAC+AGG | + | chr6_1:93871312-93871331 | Msa0899090:intron | 15.0% |
| !! | AAAATAGAACATGTATATAA+AGG | - | chr6_1:93871639-93871658 | None:intergenic | 15.0% |
| !!! | AAAAAATGAATATTTTACCT+AGG | - | chr6_1:93871773-93871792 | None:intergenic | 15.0% |
| !!! | AGGTAAAATATTCATTTTTT+AGG | + | chr6_1:93871773-93871792 | Msa0899090:intron | 15.0% |
| !!! | GGTAAAATATTCATTTTTTA+GGG | + | chr6_1:93871774-93871793 | Msa0899090:intron | 15.0% |
| !! | ATAATTGCAACAAAAATATT+TGG | - | chr6_1:93874513-93874532 | None:intergenic | 15.0% |
| !! | CATCATATAGAAAAATCAAA+TGG | - | chr6_1:93869344-93869363 | None:intergenic | 20.0% |
| !!! | CATTTGATTTTTCTATATGA+TGG | + | chr6_1:93869342-93869361 | Msa0899090:intron | 20.0% |
| !! | GTAATTAGATTATTATGAAG+AGG | + | chr6_1:93869470-93869489 | Msa0899090:intron | 20.0% |
| !!! | GTTTTTTTTTTTTGTTGTGT+TGG | + | chr6_1:93869537-93869556 | Msa0899090:intron | 20.0% |
| !!! | TATTAATTTGATTACGAATG+AGG | + | chr6_1:93869611-93869630 | Msa0899090:intron | 20.0% |
| !!! | ATTAATTTGATTACGAATGA+GGG | + | chr6_1:93869612-93869631 | Msa0899090:intron | 20.0% |
| !! | ATAAGAATGTTGTGTTAAAA+TGG | + | chr6_1:93869656-93869675 | Msa0899090:intron | 20.0% |
| !!! | TATTGTTTCATCATCTTTTT+TGG | + | chr6_1:93869680-93869699 | Msa0899090:intron | 20.0% |
| !!! | CTTTTTTGGATTTTGTTATT+TGG | + | chr6_1:93869694-93869713 | Msa0899090:intron | 20.0% |
| !! | TATATTATCAGCAAAATTAC+AGG | - | chr6_1:93869729-93869748 | None:intergenic | 20.0% |
| !! | ATTAAATATCACCAAAAAGT+AGG | - | chr6_1:93869857-93869876 | None:intergenic | 20.0% |
| !!! | AAGATTTTGGTGAAATTTTT+TGG | + | chr6_1:93869888-93869907 | Msa0899090:intron | 20.0% |
| !! | AAAGAAAGAGAAAAAAATCA+AGG | - | chr6_1:93870685-93870704 | None:intergenic | 20.0% |
| !!! | TTTTTCGTTTCGTTTATTTA+TGG | + | chr6_1:93871137-93871156 | Msa0899090:intron | 20.0% |
| !! | ATATAAAAGTCACACTTATA+TGG | - | chr6_1:93871286-93871305 | None:intergenic | 20.0% |
| !!! | CTGTTTTATCATTTTGTTTT+TGG | + | chr6_1:93871950-93871969 | Msa0899090:intron | 20.0% |
| !! | TTATGTAAGTAAACTAATCA+CGG | - | chr6_1:93872083-93872102 | None:intergenic | 20.0% |
| !! | TATAATACGAAACTAAATCA+AGG | - | chr6_1:93872884-93872903 | None:intergenic | 20.0% |
| !!! | TTTTGTTATCCCTATAATTA+AGG | + | chr6_1:93872951-93872970 | Msa0899090:intron | 20.0% |
| !!! | TTTGTTATCCCTATAATTAA+GGG | + | chr6_1:93872952-93872971 | Msa0899090:intron | 20.0% |
| !! | ATCAAAATCCCTTAATTATA+GGG | - | chr6_1:93872963-93872982 | None:intergenic | 20.0% |
| !! | AATCAAAATCCCTTAATTAT+AGG | - | chr6_1:93872964-93872983 | None:intergenic | 20.0% |
| !!! | TATAGTATTTTTAGTGGTTA+AGG | + | chr6_1:93874103-93874122 | Msa0899090:intron | 20.0% |
| !! | CCTGTAGTAAAAAAAAATAT+GGG | - | chr6_1:93874210-93874229 | None:intergenic | 20.0% |
| !! | TCCTGTAGTAAAAAAAAATA+TGG | - | chr6_1:93874211-93874230 | None:intergenic | 20.0% |
| !! | TTGACAACATTATGTAAATT+GGG | - | chr6_1:93874366-93874385 | None:intergenic | 20.0% |
| !!! | TATGTAATTCTATTTTCTCT+TGG | + | chr6_1:93876047-93876066 | Msa0899090:three_prime_UTR | 20.0% |
| !!! | CATATTCTTGGATTTGTTAT+TGG | + | chr6_1:93869209-93869228 | Msa0899090:five_prime_UTR | 25.0% |
| !!! | ATTTTTGAAGAGAGATTTTG+AGG | + | chr6_1:93869241-93869260 | Msa0899090:five_prime_UTR | 25.0% |
| !!! | TTTTTTTTGTTGTGTTGGAA+TGG | + | chr6_1:93869542-93869561 | Msa0899090:intron | 25.0% |
| ! | AATTGGTATCATTTGATTGT+TGG | + | chr6_1:93869762-93869781 | Msa0899090:intron | 25.0% |
| !!! | ACTAGGAATTTGTATTGATT+AGG | + | chr6_1:93870195-93870214 | Msa0899090:intron | 25.0% |
| ! | CACTAAAAAACCATATGAAT+AGG | - | chr6_1:93870342-93870361 | None:intergenic | 25.0% |
| ! | AATATCGTTAGGATAATCAA+TGG | + | chr6_1:93870399-93870418 | Msa0899090:CDS | 25.0% |
| !!! | AAAATACTTGAAGGTATTCA+TGG | + | chr6_1:93870462-93870481 | Msa0899090:CDS | 25.0% |
| !!! | TTTCTCTTTCTTTTTTCTAG+TGG | + | chr6_1:93870692-93870711 | Msa0899090:intron | 25.0% |
| ! | AAATCCAAAGTAAGATGTAT+TGG | - | chr6_1:93870904-93870923 | None:intergenic | 25.0% |
| ! | TATATGCATGTAAATGAGAA+GGG | - | chr6_1:93871024-93871043 | None:intergenic | 25.0% |
| ! | TTATATGCATGTAAATGAGA+AGG | - | chr6_1:93871025-93871044 | None:intergenic | 25.0% |
| ! | TCATATACATTGTCAGTATA+AGG | + | chr6_1:93871167-93871186 | Msa0899090:intron | 25.0% |
| ! | TGTGTTTGAAAACTCATATT+TGG | + | chr6_1:93872127-93872146 | Msa0899090:intron | 25.0% |
| !!! | GTATTAGTTTTCTTTTGAAC+TGG | - | chr6_1:93872324-93872343 | None:intergenic | 25.0% |
| ! | TTTCAAAGAGTTATCAAACA+AGG | + | chr6_1:93872450-93872469 | Msa0899090:intron | 25.0% |
| ! | TTCAAAGAGTTATCAAACAA+GGG | + | chr6_1:93872451-93872470 | Msa0899090:intron | 25.0% |
| !! | ATTTAAGTCTCGATTTTCTT+AGG | + | chr6_1:93873097-93873116 | Msa0899090:intron | 25.0% |
| !!! | CCCATATTTTTTTTTACTAC+AGG | + | chr6_1:93874207-93874226 | Msa0899090:intron | 25.0% |
| ! | AAAAGTTTGAGCAATACTAA+CGG | - | chr6_1:93874234-93874253 | None:intergenic | 25.0% |
| ! | ATGTTGAATAATCTGTTTGT+AGG | + | chr6_1:93874297-93874316 | Msa0899090:intron | 25.0% |
| !! | ATTTCAAAATTCTCCTTTTG+AGG | + | chr6_1:93874320-93874339 | Msa0899090:intron | 25.0% |
| ! | CTTGACAACATTATGTAAAT+TGG | - | chr6_1:93874367-93874386 | None:intergenic | 25.0% |
| !! | AATTTTTCTTTTCGTTCAGT+TGG | + | chr6_1:93874402-93874421 | Msa0899090:intron | 25.0% |
| !! | ATTTTTCTTTTCGTTCAGTT+GGG | + | chr6_1:93874403-93874422 | Msa0899090:intron | 25.0% |
| ! | AAATAACAAACCTTGATCAT+AGG | - | chr6_1:93874465-93874484 | None:intergenic | 25.0% |
| !!! | CAAGGAATTTTTAGAACAAA+CGG | + | chr6_1:93874659-93874678 | Msa0899090:intron | 25.0% |
| ! | TATGATTGTAATGCAGATAT+TGG | + | chr6_1:93874704-93874723 | Msa0899090:intron | 25.0% |
| ! | AGGTTTAATAAGCTTCAATT+CGG | - | chr6_1:93874803-93874822 | None:intergenic | 25.0% |
| ! | TAATGTATGTTATTACACGA+AGG | + | chr6_1:93874902-93874921 | Msa0899090:CDS | 25.0% |
| !! | AGAGATCCTATTAACTTTTA+TGG | + | chr6_1:93875014-93875033 | Msa0899090:CDS | 25.0% |
| ! | AAGTTCAGAATGTTTGATTA+CGG | + | chr6_1:93875294-93875313 | Msa0899090:CDS | 25.0% |
| ! | ATTATACGAAACATTTACAC+CGG | - | chr6_1:93875481-93875500 | None:intergenic | 25.0% |
| !! | AAACCATTTTCTTTCTCATT+TGG | + | chr6_1:93875853-93875872 | Msa0899090:three_prime_UTR | 25.0% |
| !! | CAACAAGTAACATATTTTCA+AGG | - | chr6_1:93875891-93875910 | None:intergenic | 25.0% |
| ! | TTGTATCATGTATGTATGTA+TGG | + | chr6_1:93875940-93875959 | Msa0899090:three_prime_UTR | 25.0% |
| ! | TGAGAAAAATGATTCTACAA+AGG | + | chr6_1:93876071-93876090 | Msa0899090:three_prime_UTR | 25.0% |
| ! | AAAATGATTCTACAAAGGTT+TGG | + | chr6_1:93876076-93876095 | Msa0899090:three_prime_UTR | 25.0% |
| CAGAATCAAAGTGAAAATGA+AGG | - | chr6_1:93869156-93869175 | None:intergenic | 30.0% | |
| TTTCACTTTGATTCTGATTC+TGG | + | chr6_1:93869160-93869179 | Msa0899090:five_prime_UTR | 30.0% | |
| TTCACTTTGATTCTGATTCT+GGG | + | chr6_1:93869161-93869180 | Msa0899090:five_prime_UTR | 30.0% | |
| !!! | GTTGTTTTTCTGCATATTCT+TGG | + | chr6_1:93869197-93869216 | Msa0899090:five_prime_UTR | 30.0% |
| !!! | ATGAATGCTTTTGGTTTTTG+AGG | + | chr6_1:93869371-93869390 | Msa0899090:intron | 30.0% |
| TTTGAGGAAATGGTTAATGA+TGG | + | chr6_1:93869387-93869406 | Msa0899090:intron | 30.0% | |
| !! | ATGGACTAAAATTCCACTTT+TGG | + | chr6_1:93869785-93869804 | Msa0899090:intron | 30.0% |
| AAAACATGCTTAAACATTCC+TGG | - | chr6_1:93869834-93869853 | None:intergenic | 30.0% | |
| !! | AAGCATGTTTTCCTACTTTT+TGG | + | chr6_1:93869843-93869862 | Msa0899090:intron | 30.0% |
| CAAAACATTATGCTGAACTT+TGG | + | chr6_1:93869932-93869951 | Msa0899090:intron | 30.0% | |
| ATTACCTAAGCTTAACTAGT+CGG | - | chr6_1:93870079-93870098 | None:intergenic | 30.0% | |
| AGGATTCATCATAATGAATC+AGG | + | chr6_1:93870137-93870156 | Msa0899090:intron | 30.0% | |
| GTGTAAAACAGATAAACACT+AGG | + | chr6_1:93870178-93870197 | Msa0899090:intron | 30.0% | |
| ! | CAGTCTTATGATAATAAGAG+TGG | - | chr6_1:93870246-93870265 | None:intergenic | 30.0% |
| !!! | TTCATATGGTTTTTTAGTGC+AGG | + | chr6_1:93870343-93870362 | Msa0899090:intron | 30.0% |
| AGTCATTGAACAATATCGTT+AGG | + | chr6_1:93870388-93870407 | Msa0899090:CDS | 30.0% | |
| !!! | TCAAGTATTTTAGCATTTCC+AGG | - | chr6_1:93870453-93870472 | None:intergenic | 30.0% |
| GGAAATGCTAAAATACTTGA+AGG | + | chr6_1:93870453-93870472 | Msa0899090:CDS | 30.0% | |
| AGTAGAATGTGAACAAATAG+CGG | + | chr6_1:93870621-93870640 | Msa0899090:intron | 30.0% | |
| AAGAGAAAAAAATCAAGGTG+AGG | - | chr6_1:93870680-93870699 | None:intergenic | 30.0% | |
| CTCATTTACATGCATATAAG+AGG | + | chr6_1:93871026-93871045 | Msa0899090:CDS | 30.0% | |
| ! | TTGTTTTCATCTCATGAAAG+TGG | + | chr6_1:93871442-93871461 | Msa0899090:CDS | 30.0% |
| TTTCTCATTATACTTGTGAC+AGG | + | chr6_1:93871684-93871703 | Msa0899090:intron | 30.0% | |
| ATCACATTAATAGCTTCGTA+AGG | - | chr6_1:93871713-93871732 | None:intergenic | 30.0% | |
| !! | TGATGGATACATTCTTCTTT+TGG | + | chr6_1:93871739-93871758 | Msa0899090:CDS | 30.0% |
| !! | TTCTTTTGGAAAGAATACCT+AGG | + | chr6_1:93871753-93871772 | Msa0899090:CDS | 30.0% |
| !!! | CATTTTGTTTTTGGTTTCAC+AGG | + | chr6_1:93871959-93871978 | Msa0899090:intron | 30.0% |
| !! | TGGAGTTTTTGATTCATCAA+TGG | + | chr6_1:93872014-93872033 | Msa0899090:CDS | 30.0% |
| !! | GGAGTTTTTGATTCATCAAT+GGG | + | chr6_1:93872015-93872034 | Msa0899090:CDS | 30.0% |
| !! | GAGTTTTTGATTCATCAATG+GGG | + | chr6_1:93872016-93872035 | Msa0899090:CDS | 30.0% |
| ! | CATGTTATCTCTATTTTGCT+TGG | + | chr6_1:93872044-93872063 | Msa0899090:intron | 30.0% |
| ! | AGAACAATGTTTTGCTTGAA+TGG | + | chr6_1:93872151-93872170 | Msa0899090:intron | 30.0% |
| !! | CTTGAATGGTTTGCTATAAT+AGG | + | chr6_1:93872165-93872184 | Msa0899090:intron | 30.0% |
| !! | AATGGTTTGCTATAATAGGT+TGG | + | chr6_1:93872169-93872188 | Msa0899090:intron | 30.0% |
| !! | ATGGTTTGCTATAATAGGTT+GGG | + | chr6_1:93872170-93872189 | Msa0899090:intron | 30.0% |
| AAAGTGCAAACAAATTAGAG+AGG | + | chr6_1:93872346-93872365 | Msa0899090:intron | 30.0% | |
| TCAAAGAGTTATCAAACAAG+GGG | + | chr6_1:93872452-93872471 | Msa0899090:intron | 30.0% | |
| ATCTCTAACAGAAAAAGGAA+AGG | - | chr6_1:93872489-93872508 | None:intergenic | 30.0% | |
| ! | TTTCCTTTTTCTGTTAGAGA+TGG | + | chr6_1:93872488-93872507 | Msa0899090:intron | 30.0% |
| ! | TTTTTCTGTTAGAGATGGAA+GGG | + | chr6_1:93872493-93872512 | Msa0899090:intron | 30.0% |
| AAGGACTTAATCATTACTCA+GGG | + | chr6_1:93872541-93872560 | Msa0899090:intron | 30.0% | |
| !!! | CAATGTTAGTAGCTCTTTTT+TGG | + | chr6_1:93872735-93872754 | Msa0899090:intron | 30.0% |
| ! | TCTCAATCCTTTATTTACCT+TGG | + | chr6_1:93872793-93872812 | Msa0899090:intron | 30.0% |
| ATCTCAATAGAGATCAATCA+GGG | - | chr6_1:93872857-93872876 | None:intergenic | 30.0% | |
| TATCTCAATAGAGATCAATC+AGG | - | chr6_1:93872858-93872877 | None:intergenic | 30.0% | |
| !!! | ATTAAGGGATTTTGATTGTG+AGG | + | chr6_1:93872967-93872986 | Msa0899090:intron | 30.0% |
| !!! | TTAAGGGATTTTGATTGTGA+GGG | + | chr6_1:93872968-93872987 | Msa0899090:intron | 30.0% |
| GAGATTCTTGAATGAATTGA+TGG | - | chr6_1:93873013-93873032 | None:intergenic | 30.0% | |
| AATCTCATTTCCAATAGTCT+AGG | + | chr6_1:93873027-93873046 | Msa0899090:intron | 30.0% | |
| GTTTAAGTCTATATTTGTGG+AGG | + | chr6_1:93873122-93873141 | Msa0899090:intron | 30.0% | |
| ! | CTCGTTAATATGGTTCTTTT+GGG | + | chr6_1:93873338-93873357 | Msa0899090:intron | 30.0% |
| !! | ATATGGTTCTTTTGGGTAAA+TGG | + | chr6_1:93873345-93873364 | Msa0899090:intron | 30.0% |
| TGAGAAAAATCAGAGATTAC+GGG | - | chr6_1:93873880-93873899 | None:intergenic | 30.0% | |
| CTGAGAAAAATCAGAGATTA+CGG | - | chr6_1:93873881-93873900 | None:intergenic | 30.0% | |
| !!! | GAACTAACTCTTTTAAGGTT+TGG | - | chr6_1:93873913-93873932 | None:intergenic | 30.0% |
| !!! | GTGTGGTATAGTATTTTTAG+TGG | + | chr6_1:93874097-93874116 | Msa0899090:intron | 30.0% |
| ! | ATATGGGAAAGTCTTATCTT+AGG | - | chr6_1:93874194-93874213 | None:intergenic | 30.0% |
| ! | TAGAGTTTTCTTTTATCTGC+AGG | + | chr6_1:93874539-93874558 | Msa0899090:intron | 30.0% |
| ! | AGAGTTTTCTTTTATCTGCA+GGG | + | chr6_1:93874540-93874559 | Msa0899090:intron | 30.0% |
| TATGATAGAGAAAATCCATC+AGG | + | chr6_1:93874768-93874787 | Msa0899090:CDS | 30.0% | |
| TGTGCAATTTCACATAGTTT+AGG | + | chr6_1:93874865-93874884 | Msa0899090:CDS | 30.0% | |
| CAAAGTTATAAGACCTTCAA+TGG | + | chr6_1:93875425-93875444 | Msa0899090:CDS | 30.0% | |
| ! | TTAGCTTGATGCTTTGAATT+CGG | - | chr6_1:93875591-93875610 | None:intergenic | 30.0% |
| AATCAAAGAGTTGAAAAGTC+AGG | + | chr6_1:93875609-93875628 | Msa0899090:CDS | 30.0% | |
| ATCAAAGAGTTGAAAAGTCA+GGG | + | chr6_1:93875610-93875629 | Msa0899090:CDS | 30.0% | |
| CAACAATGAATGAATCAAAG+TGG | - | chr6_1:93875790-93875809 | None:intergenic | 30.0% | |
| CACTTTGATTCATTCATTGT+TGG | + | chr6_1:93875788-93875807 | Msa0899090:three_prime_UTR | 30.0% | |
| TATCATGTATGTATGTATGG+TGG | + | chr6_1:93875943-93875962 | Msa0899090:three_prime_UTR | 30.0% | |
| !! | AAGAGAGATTTTGAGGAAGA+AGG | + | chr6_1:93869248-93869267 | Msa0899090:five_prime_UTR | 35.0% |
| ! | TTACTCTTTAGAGACACCAA+TGG | - | chr6_1:93869319-93869338 | None:intergenic | 35.0% |
| ! | ATTGGTGTCTCTAAAGAGTA+AGG | + | chr6_1:93869318-93869337 | Msa0899090:intron | 35.0% |
| !!! | GCTTTTGGTTTTTGAGGAAA+TGG | + | chr6_1:93869377-93869396 | Msa0899090:intron | 35.0% |
| TATTATGAAGAGGGTTCTTG+AGG | + | chr6_1:93869480-93869499 | Msa0899090:intron | 35.0% | |
| ATTACGAATGAGGGTTATTG+AGG | + | chr6_1:93869621-93869640 | Msa0899090:intron | 35.0% | |
| GGTATCATTTGATTGTTGGA+TGG | + | chr6_1:93869766-93869785 | Msa0899090:intron | 35.0% | |
| TTCTGCTTCAATGATATACC+AGG | + | chr6_1:93869813-93869832 | Msa0899090:intron | 35.0% | |
| GTGATTCATCAAAGTGAATC+AGG | + | chr6_1:93870117-93870136 | Msa0899090:intron | 35.0% | |
| !! | TACTTGAAGGTATTCATGGT+TGG | + | chr6_1:93870466-93870485 | Msa0899090:CDS | 35.0% |
| !! | ACTTGAAGGTATTCATGGTT+GGG | + | chr6_1:93870467-93870486 | Msa0899090:CDS | 35.0% |
| ! | AAGGCTTTTCATTACGACAT+CGG | + | chr6_1:93870541-93870560 | Msa0899090:intron | 35.0% |
| ATCAAGGTGAGGAATGTTAT+CGG | - | chr6_1:93870669-93870688 | None:intergenic | 35.0% | |
| ATGGATGAATTGGTTGAAAG+AGG | - | chr6_1:93870723-93870742 | None:intergenic | 35.0% | |
| CAGAAAGTTCATGGATGAAT+TGG | - | chr6_1:93870733-93870752 | None:intergenic | 35.0% | |
| ATTCATCCATGAACTTTCTG+TGG | + | chr6_1:93870733-93870752 | Msa0899090:CDS | 35.0% | |
| TCTATCACTATCTTCTTCTC+CGG | - | chr6_1:93870792-93870811 | None:intergenic | 35.0% | |
| CCTATTGTATCTAGCAAAAG+CGG | - | chr6_1:93870864-93870883 | None:intergenic | 35.0% | |
| ACAATAGGCATCAGATGAAT+TGG | + | chr6_1:93870876-93870895 | Msa0899090:CDS | 35.0% | |
| GGATCCAATACATCTTACTT+TGG | + | chr6_1:93870897-93870916 | Msa0899090:CDS | 35.0% | |
| TTCCTGTGAAATTATTGCTG+AGG | + | chr6_1:93870927-93870946 | Msa0899090:CDS | 35.0% | |
| ATCCTCAGCAATAATTTCAC+AGG | - | chr6_1:93870932-93870951 | None:intergenic | 35.0% | |
| ACACGACAAAATAAGCTAAC+TGG | - | chr6_1:93870970-93870989 | None:intergenic | 35.0% | |
| ! | TAAGAGGATGCAAAGTATCA+AGG | + | chr6_1:93871042-93871061 | Msa0899090:CDS | 35.0% |
| GTTAAACAGGATCTTCATCT+CGG | + | chr6_1:93871325-93871344 | Msa0899090:intron | 35.0% | |
| ! | ATTGCACCAAAAGCTTTTGA+GGG | - | chr6_1:93871415-93871434 | None:intergenic | 35.0% |
| ! | TATTGCACCAAAAGCTTTTG+AGG | - | chr6_1:93871416-93871435 | None:intergenic | 35.0% |
| !! | AAAGCTTTTGGTGCAATATG+CGG | + | chr6_1:93871418-93871437 | Msa0899090:CDS | 35.0% |
| AAAAATTCGCAATCCTGTTG+TGG | + | chr6_1:93871471-93871490 | Msa0899090:CDS | 35.0% | |
| ATTAATGTGATCACTGCTGA+TGG | + | chr6_1:93871722-93871741 | Msa0899090:CDS | 35.0% | |
| ! | AAAGCTCTTTTTCTTCAGCA+TGG | + | chr6_1:93871994-93872013 | Msa0899090:CDS | 35.0% |
| !! | TCTCTATTTTGCTTGGTTCT+AGG | + | chr6_1:93872051-93872070 | Msa0899090:intron | 35.0% |
| GCATGAATCTTACTGTTAGT+AGG | + | chr6_1:93872231-93872250 | Msa0899090:intron | 35.0% | |
| GAGTTAAACACTCATTAACC+AGG | - | chr6_1:93872419-93872438 | None:intergenic | 35.0% | |
| GGTTAATGAGTGTTTAACTC+AGG | + | chr6_1:93872419-93872438 | Msa0899090:intron | 35.0% | |
| GAAAAAGGAAAGGAGTCAAA+GGG | - | chr6_1:93872479-93872498 | None:intergenic | 35.0% | |
| AGAAAAAGGAAAGGAGTCAA+AGG | - | chr6_1:93872480-93872499 | None:intergenic | 35.0% | |
| CTTCCATCTCTAACAGAAAA+AGG | - | chr6_1:93872494-93872513 | None:intergenic | 35.0% | |
| ! | CTTTTTCTGTTAGAGATGGA+AGG | + | chr6_1:93872492-93872511 | Msa0899090:intron | 35.0% |
| GAAGGACTTAATCATTACTC+AGG | + | chr6_1:93872540-93872559 | Msa0899090:intron | 35.0% | |
| ATTACTCAGGGATCAAGATA+GGG | + | chr6_1:93872553-93872572 | Msa0899090:intron | 35.0% | |
| GTCATTGACATACTGAGAAA+GGG | - | chr6_1:93872598-93872617 | None:intergenic | 35.0% | |
| TGTCATTGACATACTGAGAA+AGG | - | chr6_1:93872599-93872618 | None:intergenic | 35.0% | |
| GAATCGTCTTAATAGTCCAA+AGG | - | chr6_1:93872652-93872671 | None:intergenic | 35.0% | |
| !!! | TAGCTCTTTTTTGGTCTTAG+CGG | + | chr6_1:93872744-93872763 | Msa0899090:intron | 35.0% |
| TAGCAGACCAAGGTAAATAA+AGG | - | chr6_1:93872803-93872822 | None:intergenic | 35.0% | |
| ! | TAAGTCTCGATTTTCTTAGG+CGG | + | chr6_1:93873100-93873119 | Msa0899090:intron | 35.0% |
| GCGGTTTAAGTCTATATTTG+TGG | + | chr6_1:93873119-93873138 | Msa0899090:intron | 35.0% | |
| AATGAAATGCCATAAACCCA+TGG | - | chr6_1:93873151-93873170 | None:intergenic | 35.0% | |
| ATCATGTTTCATGAAGATGC+TGG | + | chr6_1:93873173-93873192 | Msa0899090:intron | 35.0% | |
| CTAGCAAAATCCTATGTGTT+AGG | + | chr6_1:93873258-93873277 | Msa0899090:intron | 35.0% | |
| CCAAAAGAACCATATTAACG+AGG | - | chr6_1:93873340-93873359 | None:intergenic | 35.0% | |
| ! | CCTCGTTAATATGGTTCTTT+TGG | + | chr6_1:93873337-93873356 | Msa0899090:intron | 35.0% |
| !! | TTCTTTTGGGTAAATGGAAG+TGG | + | chr6_1:93873351-93873370 | Msa0899090:intron | 35.0% |
| GAAGTGGAGGTTAATTTCTA+GGG | + | chr6_1:93873367-93873386 | Msa0899090:intron | 35.0% | |
| ! | AAGTGGAGGTTAATTTCTAG+GGG | + | chr6_1:93873368-93873387 | Msa0899090:intron | 35.0% |
| !! | GGTTCTGGTTTGTATTTGAT+CGG | + | chr6_1:93873514-93873533 | Msa0899090:intron | 35.0% |
| !! | CTTTGGAATTGGATCATCAA+GGG | - | chr6_1:93873625-93873644 | None:intergenic | 35.0% |
| GAGTGGACACTTATTTGTTT+GGG | + | chr6_1:93873732-93873751 | Msa0899090:intron | 35.0% | |
| ATACCCTGAACTAACCAAAA+AGG | - | chr6_1:93873857-93873876 | None:intergenic | 35.0% | |
| ! | CGTAATCTCTGATTTTTCTC+AGG | + | chr6_1:93873879-93873898 | Msa0899090:intron | 35.0% |
| !! | TCTGATTTTTCTCAGGTTGT+TGG | + | chr6_1:93873886-93873905 | Msa0899090:intron | 35.0% |
| ! | GAAGGGAACTAACTCTTTTA+AGG | - | chr6_1:93873918-93873937 | None:intergenic | 35.0% |
| AAAGAGTTAGTTCCCTTCTA+CGG | + | chr6_1:93873920-93873939 | Msa0899090:intron | 35.0% | |
| ACAAGACAATTACCGTAGAA+GGG | - | chr6_1:93873935-93873954 | None:intergenic | 35.0% | |
| ! | AACGCCAAAATTTGTTCAGA+CGG | + | chr6_1:93873975-93873994 | Msa0899090:intron | 35.0% |
| AGGGTTATTATTGACCATAG+AGG | + | chr6_1:93873998-93874017 | Msa0899090:intron | 35.0% | |
| !! | TTGACCATAGAGGTATCAAT+TGG | + | chr6_1:93874008-93874027 | Msa0899090:intron | 35.0% |
| !! | TGACCATAGAGGTATCAATT+GGG | + | chr6_1:93874009-93874028 | Msa0899090:intron | 35.0% |
| AATCACAAGTCACAAACAGA+TGG | - | chr6_1:93874066-93874085 | None:intergenic | 35.0% | |
| ! | TCTGTTTGTGACTTGTGATT+TGG | + | chr6_1:93874066-93874085 | Msa0899090:intron | 35.0% |
| !!! | GTGATTTGGTTTTTCATGTG+TGG | + | chr6_1:93874080-93874099 | Msa0899090:intron | 35.0% |
| ! | AAATCTTTTCCAGCCTCAAA+AGG | - | chr6_1:93874336-93874355 | None:intergenic | 35.0% |
| GTTCATCACATCAAATCTCA+AGG | + | chr6_1:93874641-93874660 | Msa0899090:intron | 35.0% | |
| ! | TGGATTTTCTCTATCATAGC+AGG | - | chr6_1:93874766-93874785 | None:intergenic | 35.0% |
| GCTTATTAAACCTGATATCG+AGG | + | chr6_1:93874810-93874829 | Msa0899090:CDS | 35.0% | |
| TATTAAACCTGATATCGAGG+AGG | + | chr6_1:93874813-93874832 | Msa0899090:CDS | 35.0% | |
| GCAATTTCACATAGTTTAGG+AGG | + | chr6_1:93874868-93874887 | Msa0899090:CDS | 35.0% | |
| ATCAATCTTGAAAGTCTGTG+TGG | - | chr6_1:93874940-93874959 | None:intergenic | 35.0% | |
| ! | TTGATTTTATTATCCCCAGC+CGG | + | chr6_1:93874955-93874974 | Msa0899090:CDS | 35.0% |
| GTTAGAGTCATCATGAAAAC+CGG | - | chr6_1:93874977-93874996 | None:intergenic | 35.0% | |
| !!! | CTCTAACATAGTTTTTTCCG+CGG | + | chr6_1:93874990-93875009 | Msa0899090:CDS | 35.0% |
| CAGGAGCCATAAAAGTTAAT+AGG | - | chr6_1:93875023-93875042 | None:intergenic | 35.0% | |
| ! | TGCTTGTCTTTAAGTTAGCT+CGG | + | chr6_1:93875094-93875113 | Msa0899090:CDS | 35.0% |
| ACTCTAATGAGCTATGTTGT+TGG | + | chr6_1:93875156-93875175 | Msa0899090:CDS | 35.0% | |
| TAGTGTCTCTTTACCATTGA+AGG | - | chr6_1:93875441-93875460 | None:intergenic | 35.0% | |
| ! | TACAGATTGATGAAAAGTGC+CGG | + | chr6_1:93875459-93875478 | Msa0899090:CDS | 35.0% |
| ACAAGATGTAGCTAACAAGT+AGG | + | chr6_1:93875641-93875660 | Msa0899090:CDS | 35.0% | |
| AAAATATCAGCTGATCCACT+CGG | - | chr6_1:93875711-93875730 | None:intergenic | 35.0% | |
| !!! | GTGGATCAGCTGATATTTTT+TGG | + | chr6_1:93875712-93875731 | Msa0899090:three_prime_UTR | 35.0% |
| CCTCCAAATGAGAAAGAAAA+TGG | - | chr6_1:93875859-93875878 | None:intergenic | 35.0% | |
| ! | CCATTTTCTTTCTCATTTGG+AGG | + | chr6_1:93875856-93875875 | Msa0899090:three_prime_UTR | 35.0% |
| TTTCTCATTTGGAGGAAAAG+TGG | + | chr6_1:93875864-93875883 | Msa0899090:three_prime_UTR | 35.0% | |
| ACTTCCTTAACCTCATTGAT+TGG | + | chr6_1:93876011-93876030 | Msa0899090:three_prime_UTR | 35.0% | |
| ! | CTTCCTTAACCTCATTGATT+GGG | + | chr6_1:93876012-93876031 | Msa0899090:three_prime_UTR | 35.0% |
| TTACCCAATCAATGAGGTTA+AGG | - | chr6_1:93876018-93876037 | None:intergenic | 35.0% | |
| TAAGCCTATGATGCAACGTT+TGG | + | chr6_1:93869284-93869303 | Msa0899090:exon | 40.0% | |
| TCAACCAAACGTTGCATCAT+AGG | - | chr6_1:93869291-93869310 | None:intergenic | 40.0% | |
| ! | TGGTAGCTGATGAATGCTTT+TGG | + | chr6_1:93869362-93869381 | Msa0899090:intron | 40.0% |
| AAGCAGAACAGAACCAAAAG+TGG | - | chr6_1:93869801-93869820 | None:intergenic | 40.0% | |
| ! | TTTGCCGACTAGTTAAGCTT+AGG | + | chr6_1:93870072-93870091 | Msa0899090:intron | 40.0% |
| CATATGAATAGGATACCCCT+CGG | - | chr6_1:93870331-93870350 | None:intergenic | 40.0% | |
| ! | CTTTTGTTGGCATTACTTCC+TGG | + | chr6_1:93870432-93870451 | Msa0899090:CDS | 40.0% |
| GTTCACATTCTACTACGCAA+TGG | - | chr6_1:93870615-93870634 | None:intergenic | 40.0% | |
| CAGAATCCACAGAAAGTTCA+TGG | - | chr6_1:93870742-93870761 | None:intergenic | 40.0% | |
| !! | CCGCTTTTGCTAGATACAAT+AGG | + | chr6_1:93870861-93870880 | Msa0899090:CDS | 40.0% |
| ! | GTTTCTCTCTAGAGATGCAT+AGG | - | chr6_1:93871000-93871019 | None:intergenic | 40.0% |
| TGTCTTCGATGTTGTTCACA+AGG | + | chr6_1:93871369-93871388 | Msa0899090:CDS | 40.0% | |
| ! | CTATCTCCCTCAAAAGCTTT+TGG | + | chr6_1:93871406-93871425 | Msa0899090:CDS | 40.0% |
| ! | TTTTCCTCTCAGAAGATGCA+GGG | - | chr6_1:93871534-93871553 | None:intergenic | 40.0% |
| ! | ATTTTCCTCTCAGAAGATGC+AGG | - | chr6_1:93871535-93871554 | None:intergenic | 40.0% |
| CAGGATGTCATAACAGATCT+CGG | + | chr6_1:93871592-93871611 | Msa0899090:CDS | 40.0% | |
| AGGATGTCATAACAGATCTC+GGG | + | chr6_1:93871593-93871612 | Msa0899090:CDS | 40.0% | |
| TCATAACAGATCTCGGGTAA+TGG | + | chr6_1:93871599-93871618 | Msa0899090:intron | 40.0% | |
| GTGCAAACAAATTAGAGAGG+CGG | + | chr6_1:93872349-93872368 | Msa0899090:intron | 40.0% | |
| TTCTGTGAGTCTTTATGTCC+TGG | + | chr6_1:93872398-93872417 | Msa0899090:intron | 40.0% | |
| CATTACTCAGGGATCAAGAT+AGG | + | chr6_1:93872552-93872571 | Msa0899090:intron | 40.0% | |
| TTACTCAGGGATCAAGATAG+GGG | + | chr6_1:93872554-93872573 | Msa0899090:intron | 40.0% | |
| TGTCAATGACACTACATCCT+TGG | + | chr6_1:93872608-93872627 | Msa0899090:intron | 40.0% | |
| GTCAATGACACTACATCCTT+GGG | + | chr6_1:93872609-93872628 | Msa0899090:intron | 40.0% | |
| TCAATGACACTACATCCTTG+GGG | + | chr6_1:93872610-93872629 | Msa0899090:intron | 40.0% | |
| AAGATACGATGGAGAACCTT+TGG | + | chr6_1:93872633-93872652 | Msa0899090:intron | 40.0% | |
| GGACTATTAAGACGATTCTC+CGG | + | chr6_1:93872654-93872673 | Msa0899090:intron | 40.0% | |
| TTAAAGCTAGCTCAAAGCAC+CGG | - | chr6_1:93872676-93872695 | None:intergenic | 40.0% | |
| TATTTACCTTGGTCTGCTAG+TGG | + | chr6_1:93872804-93872823 | Msa0899090:intron | 40.0% | |
| ATTTACCTTGGTCTGCTAGT+GGG | + | chr6_1:93872805-93872824 | Msa0899090:intron | 40.0% | |
| TTTCCAATAGTCTAGGTGTG+TGG | + | chr6_1:93873034-93873053 | Msa0899090:intron | 40.0% | |
| TATATTTGTGGAGGAGTCCA+TGG | + | chr6_1:93873131-93873150 | Msa0899090:intron | 40.0% | |
| ATATTTGTGGAGGAGTCCAT+GGG | + | chr6_1:93873132-93873151 | Msa0899090:intron | 40.0% | |
| AAAGGATTGTCTGACTACAG+AGG | + | chr6_1:93873208-93873227 | Msa0899090:intron | 40.0% | |
| GCAAAATCCTATGTGTTAGG+TGG | + | chr6_1:93873261-93873280 | Msa0899090:intron | 40.0% | |
| GGTTCTATGCCTCGTTAATA+TGG | + | chr6_1:93873328-93873347 | Msa0899090:intron | 40.0% | |
| !! | TTTTGGGTAAATGGAAGTGG+AGG | + | chr6_1:93873354-93873373 | Msa0899090:intron | 40.0% |
| GGAAGTGGAGGTTAATTTCT+AGG | + | chr6_1:93873366-93873385 | Msa0899090:intron | 40.0% | |
| ! | AGTGGAGGTTAATTTCTAGG+GGG | + | chr6_1:93873369-93873388 | Msa0899090:intron | 40.0% |
| CCAGATGAAACAGGATTGAA+CGG | - | chr6_1:93873436-93873455 | None:intergenic | 40.0% | |
| CGTTCAATCCTGTTTCATCT+GGG | + | chr6_1:93873434-93873453 | Msa0899090:intron | 40.0% | |
| !! | CCTTTGGAATTGGATCATCA+AGG | - | chr6_1:93873626-93873645 | None:intergenic | 40.0% |
| ! | CCTTGATGATCCAATTCCAA+AGG | + | chr6_1:93873623-93873642 | Msa0899090:intron | 40.0% |
| !!! | GGAATTTTGATTGGCCACAT+GGG | + | chr6_1:93873670-93873689 | Msa0899090:intron | 40.0% |
| GGAGTGGACACTTATTTGTT+TGG | + | chr6_1:93873731-93873750 | Msa0899090:intron | 40.0% | |
| TGGACACTTATTTGTTTGGG+AGG | + | chr6_1:93873735-93873754 | Msa0899090:intron | 40.0% | |
| CATTGAGCACCAAGATCAAT+TGG | - | chr6_1:93873773-93873792 | None:intergenic | 40.0% | |
| !!! | GGTCCTTTTTGGTTAGTTCA+GGG | + | chr6_1:93873851-93873870 | Msa0899090:intron | 40.0% |
| GACAAGACAATTACCGTAGA+AGG | - | chr6_1:93873936-93873955 | None:intergenic | 40.0% | |
| CTACGGTAATTGTCTTGTCT+TGG | + | chr6_1:93873937-93873956 | Msa0899090:intron | 40.0% | |
| ! | CCAAAATTTGTTCAGACGGA+GGG | + | chr6_1:93873979-93873998 | Msa0899090:intron | 40.0% |
| AGACCCAATTGATACCTCTA+TGG | - | chr6_1:93874015-93874034 | None:intergenic | 40.0% | |
| ! | GGTATCAATTGGGTCTTTTG+AGG | + | chr6_1:93874019-93874038 | Msa0899090:intron | 40.0% |
| !!! | TTGGGTCTTTTGAGGTTTTC+TGG | + | chr6_1:93874027-93874046 | Msa0899090:intron | 40.0% |
| !! | TTGAGGTTTTCTGGTAGAGT+CGG | + | chr6_1:93874036-93874055 | Msa0899090:intron | 40.0% |
| !!! | CAAAATTCTCCTTTTGAGGC+TGG | + | chr6_1:93874324-93874343 | Msa0899090:intron | 40.0% |
| TCGTTCAGTTGGGTATCTAA+TGG | + | chr6_1:93874413-93874432 | Msa0899090:intron | 40.0% | |
| !! | TGGGTATCTAATGGTGTTGT+TGG | + | chr6_1:93874422-93874441 | Msa0899090:CDS | 40.0% |
| GCAGGGTATGATGTATATCT+CGG | + | chr6_1:93874557-93874576 | Msa0899090:intron | 40.0% | |
| GTATATCTCGGAAACTTTCG+TGG | + | chr6_1:93874569-93874588 | Msa0899090:CDS | 40.0% | |
| !! | ACTTTCGTGGTTTGGTTTCA+AGG | + | chr6_1:93874582-93874601 | Msa0899090:CDS | 40.0% |
| !! | CTTTCGTGGTTTGGTTTCAA+GGG | + | chr6_1:93874583-93874602 | Msa0899090:CDS | 40.0% |
| CAGTACTCAATCAATGAGCA+CGG | + | chr6_1:93874727-93874746 | Msa0899090:CDS | 40.0% | |
| CTTGTAAAGCTGATCGTCAT+CGG | - | chr6_1:93874842-93874861 | None:intergenic | 40.0% | |
| CGAGTAGGTATATAGAATGC+AGG | - | chr6_1:93875063-93875082 | None:intergenic | 40.0% | |
| AGCATGCGAAAAAATCGAGT+AGG | - | chr6_1:93875078-93875097 | None:intergenic | 40.0% | |
| ! | GCTTGTCTTTAAGTTAGCTC+GGG | + | chr6_1:93875095-93875114 | Msa0899090:CDS | 40.0% |
| CTAATGAGCTATGTTGTTGG+CGG | + | chr6_1:93875159-93875178 | Msa0899090:CDS | 40.0% | |
| ATGTCGTTCATGTTGTAGTG+AGG | - | chr6_1:93875219-93875238 | None:intergenic | 40.0% | |
| CATAATCTGTGCAAGATGGA+GGG | - | chr6_1:93875265-93875284 | None:intergenic | 40.0% | |
| AAACGCATCTGCCAATAGAA+TGG | + | chr6_1:93875317-93875336 | Msa0899090:CDS | 40.0% | |
| TCTGCCAATAGAATGGCTTA+CGG | + | chr6_1:93875324-93875343 | Msa0899090:CDS | 40.0% | |
| TGAACCGTAAGCCATTCTAT+TGG | - | chr6_1:93875331-93875350 | None:intergenic | 40.0% | |
| TAGTGTTTACCCAAGTCCAA+AGG | - | chr6_1:93875360-93875379 | None:intergenic | 40.0% | |
| TTGGACTTGGGTAAACACTA+CGG | + | chr6_1:93875360-93875379 | Msa0899090:CDS | 40.0% | |
| ATTCCTGTTGATCTTGTTGC+TGG | + | chr6_1:93875393-93875412 | Msa0899090:CDS | 40.0% | |
| TTATACAGTCGTTGTCGAAC+TGG | + | chr6_1:93875677-93875696 | Msa0899090:three_prime_UTR | 40.0% | |
| TGAATGAATCAAAGTGGCTC+CGG | - | chr6_1:93875784-93875803 | None:intergenic | 40.0% | |
| ! | GAAGCATTACCCAATCAATG+AGG | - | chr6_1:93876024-93876043 | None:intergenic | 40.0% |
| CGTTTGGTTGATCATGCCAT+TGG | + | chr6_1:93869300-93869319 | Msa0899090:CDS | 45.0% | |
| CATTGATGTTTGAGAGCCGA+GGG | + | chr6_1:93870312-93870331 | Msa0899090:intron | 45.0% | |
| ATTGATGTTTGAGAGCCGAG+GGG | + | chr6_1:93870313-93870332 | Msa0899090:intron | 45.0% | |
| !! | CGAGGGGTATCCTATTCATA+TGG | + | chr6_1:93870329-93870348 | Msa0899090:intron | 45.0% |
| !! | TGGAGTGTCTGCACTTTTGT+TGG | + | chr6_1:93870419-93870438 | Msa0899090:CDS | 45.0% |
| AACTCAGACCAACTTTCCGA+GGG | + | chr6_1:93870490-93870509 | Msa0899090:CDS | 45.0% | |
| ! | GCGGATTATAGCTTGTGTAG+CGG | + | chr6_1:93870640-93870659 | Msa0899090:intron | 45.0% |
| GGATTCTGATAACTCAAGCG+TGG | + | chr6_1:93870754-93870773 | Msa0899090:CDS | 45.0% | |
| AGCGTGGAATACTCATCATC+CGG | + | chr6_1:93870770-93870789 | Msa0899090:CDS | 45.0% | |
| TATGAGATGCAGGAGATGGA+GGG | - | chr6_1:93870823-93870842 | None:intergenic | 45.0% | |
| GAACTATGAGATGCAGGAGA+TGG | - | chr6_1:93870827-93870846 | None:intergenic | 45.0% | |
| !! | GCTCTAGAACTATGAGATGC+AGG | - | chr6_1:93870833-93870852 | None:intergenic | 45.0% |
| GTATCTAGCAAAAGCGGCTT+CGG | - | chr6_1:93870858-93870877 | None:intergenic | 45.0% | |
| GTCTTCTATCAGTAGCACGA+TGG | - | chr6_1:93871078-93871097 | None:intergenic | 45.0% | |
| CAACAAGTGGAAACAGGCTT+TGG | - | chr6_1:93872271-93872290 | None:intergenic | 45.0% | |
| ACTTTGCCAAGAGCAGTTGA+TGG | + | chr6_1:93872708-93872727 | Msa0899090:intron | 45.0% | |
| CTTTGCCAAGAGCAGTTGAT+GGG | + | chr6_1:93872709-93872728 | Msa0899090:intron | 45.0% | |
| TTTACCTTGGTCTGCTAGTG+GGG | + | chr6_1:93872806-93872825 | Msa0899090:intron | 45.0% | |
| ACTCCACACACCTAGACTAT+TGG | - | chr6_1:93873040-93873059 | None:intergenic | 45.0% | |
| ATAGTCTAGGTGTGTGGAGT+AGG | + | chr6_1:93873040-93873059 | Msa0899090:intron | 45.0% | |
| ! | TGAAGATGCTGGTTGAAGTG+TGG | + | chr6_1:93873184-93873203 | Msa0899090:intron | 45.0% |
| ! | TGCTGGTTGAAGTGTGGAAA+AGG | + | chr6_1:93873190-93873209 | Msa0899090:intron | 45.0% |
| !! | TCCTTTGGGATGGTTCTAAG+CGG | + | chr6_1:93873235-93873254 | Msa0899090:intron | 45.0% |
| GGATTCGTAACCTAGCAATG+AGG | - | chr6_1:93873415-93873434 | None:intergenic | 45.0% | |
| CCGTTCAATCCTGTTTCATC+TGG | + | chr6_1:93873433-93873452 | Msa0899090:intron | 45.0% | |
| TCAATCCTGTTTCATCTGGG+TGG | + | chr6_1:93873437-93873456 | Msa0899090:intron | 45.0% | |
| CATTTCGTAACCCACCCAAA+CGG | - | chr6_1:93873463-93873482 | None:intergenic | 45.0% | |
| GGTTACGAAATGTCTCTCAG+TGG | + | chr6_1:93873471-93873490 | Msa0899090:intron | 45.0% | |
| TACGAAATGTCTCTCAGTGG+TGG | + | chr6_1:93873474-93873493 | Msa0899090:intron | 45.0% | |
| ACGAAATGTCTCTCAGTGGT+GGG | + | chr6_1:93873475-93873494 | Msa0899090:intron | 45.0% | |
| GTTTGTATTTGATCGGCCAC+TGG | + | chr6_1:93873521-93873540 | Msa0899090:intron | 45.0% | |
| CATCCCAAAAAGAGGTTGAC+CGG | - | chr6_1:93873582-93873601 | None:intergenic | 45.0% | |
| CTAGTGGTCATCCCAAAAAG+AGG | - | chr6_1:93873590-93873609 | None:intergenic | 45.0% | |
| !!! | CTCTTTTTGGGATGACCACT+AGG | + | chr6_1:93873588-93873607 | Msa0899090:intron | 45.0% |
| !!! | TTTTTGGGATGACCACTAGG+TGG | + | chr6_1:93873591-93873610 | Msa0899090:intron | 45.0% |
| !! | CCTGAAAGAGCCTTTGGAAT+TGG | - | chr6_1:93873636-93873655 | None:intergenic | 45.0% |
| CCAATTCCAAAGGCTCTTTC+AGG | + | chr6_1:93873633-93873652 | Msa0899090:intron | 45.0% | |
| CCAAAACCTGAAAGAGCCTT+TGG | - | chr6_1:93873642-93873661 | None:intergenic | 45.0% | |
| !!! | CCAAAGGCTCTTTCAGGTTT+TGG | + | chr6_1:93873639-93873658 | Msa0899090:intron | 45.0% |
| !!! | TTTCAGGTTTTGGACCAGCA+GGG | + | chr6_1:93873649-93873668 | Msa0899090:intron | 45.0% |
| !! | GACCAGCAGGGAATTTTGAT+TGG | + | chr6_1:93873661-93873680 | Msa0899090:intron | 45.0% |
| !!! | GGGAATTTTGATTGGCCACA+TGG | + | chr6_1:93873669-93873688 | Msa0899090:intron | 45.0% |
| ATAAGTGTCCACTCCACCTA+AGG | - | chr6_1:93873726-93873745 | None:intergenic | 45.0% | |
| ATTTGTTTGGGAGGAGAGCT+TGG | + | chr6_1:93873744-93873763 | Msa0899090:intron | 45.0% | |
| CCTCTAACAATCCTCGACAT+GGG | - | chr6_1:93873808-93873827 | None:intergenic | 45.0% | |
| ACCTCTAACAATCCTCGACA+TGG | - | chr6_1:93873809-93873828 | None:intergenic | 45.0% | |
| ATGTCGAGGATTGTTAGAGG+TGG | + | chr6_1:93873808-93873827 | Msa0899090:intron | 45.0% | |
| !!! | GGGTCCTTTTTGGTTAGTTC+AGG | + | chr6_1:93873850-93873869 | Msa0899090:intron | 45.0% |
| ! | GCCAAAATTTGTTCAGACGG+AGG | + | chr6_1:93873978-93873997 | Msa0899090:intron | 45.0% |
| ! | CCCTCCGTCTGAACAAATTT+TGG | - | chr6_1:93873982-93874001 | None:intergenic | 45.0% |
| GTTAGTCATGCCTCCAGATT+CGG | + | chr6_1:93874131-93874150 | Msa0899090:intron | 45.0% | |
| TGATCATAGGCTGCAAAAGC+TGG | - | chr6_1:93874452-93874471 | None:intergenic | 45.0% | |
| ! | GCTTTTGCAGCCTATGATCA+AGG | + | chr6_1:93874452-93874471 | Msa0899090:CDS | 45.0% |
| TCTCGGAAACTTTCGTGGTT+TGG | + | chr6_1:93874574-93874593 | Msa0899090:CDS | 45.0% | |
| AATCAATGAGCACGGTACTG+AGG | + | chr6_1:93874735-93874754 | Msa0899090:CDS | 45.0% | |
| ! | ATTCGGCAGTTTTCACCTGA+TGG | - | chr6_1:93874786-93874805 | None:intergenic | 45.0% |
| AGTCATCATGAAAACCGGCT+GGG | - | chr6_1:93874972-93874991 | None:intergenic | 45.0% | |
| AGTTAATAGGATCTCTGCCG+CGG | - | chr6_1:93875010-93875029 | None:intergenic | 45.0% | |
| !! | TCGAATTGGGTTGGAGTTCT+AGG | + | chr6_1:93875189-93875208 | Msa0899090:CDS | 45.0% |
| TACAACATGAACGACATGCC+AGG | + | chr6_1:93875222-93875241 | Msa0899090:CDS | 45.0% | |
| GCATAATCTGTGCAAGATGG+AGG | - | chr6_1:93875266-93875285 | None:intergenic | 45.0% | |
| CACGCATAATCTGTGCAAGA+TGG | - | chr6_1:93875269-93875288 | None:intergenic | 45.0% | |
| CTTGCACAGATTATGCGTGT+TGG | + | chr6_1:93875270-93875289 | Msa0899090:CDS | 45.0% | |
| TGTCCAGCAACAAGATCAAC+AGG | - | chr6_1:93875399-93875418 | None:intergenic | 45.0% | |
| CATACGACAAGAGTTCTTCG+CGG | - | chr6_1:93875542-93875561 | None:intergenic | 45.0% | |
| TCGGATCAACAAGAAGCAAG+CGG | - | chr6_1:93875572-93875591 | None:intergenic | 45.0% | |
| GTTGAAAAGTCAGGGCAGAA+AGG | + | chr6_1:93875618-93875637 | Msa0899090:CDS | 45.0% | |
| ACAACAGTTCCTCTCTACTC+AGG | + | chr6_1:93875740-93875759 | Msa0899090:three_prime_UTR | 45.0% | |
| !! | CGAAAAGTACCTGAGTAGAG+AGG | - | chr6_1:93875752-93875771 | None:intergenic | 45.0% |
| ! | GTACTTTTCGCATTCGTTGC+CGG | + | chr6_1:93875762-93875781 | Msa0899090:three_prime_UTR | 45.0% |
| !! | AAATAAAATATCTATATAAT+AGG | - | chr6_1:93872913-93872932 | None:intergenic | 5.0% |
| ! | GCATTGATGTTTGAGAGCCG+AGG | + | chr6_1:93870311-93870330 | Msa0899090:intron | 50.0% |
| GAACTCAGACCAACTTTCCG+AGG | + | chr6_1:93870489-93870508 | Msa0899090:CDS | 50.0% | |
| CCTTACTTCTCCATCCATCG+TGG | - | chr6_1:93870525-93870544 | None:intergenic | 50.0% | |
| CCACGATGGATGGAGAAGTA+AGG | + | chr6_1:93870522-93870541 | Msa0899090:intron | 50.0% | |
| CTATGAGATGCAGGAGATGG+AGG | - | chr6_1:93870824-93870843 | None:intergenic | 50.0% | |
| GCTAACTGGAGAAGACGAAG+CGG | - | chr6_1:93870956-93870975 | None:intergenic | 50.0% | |
| ! | CGTGCTACTGATAGAAGACG+CGG | + | chr6_1:93871079-93871098 | Msa0899090:CDS | 50.0% |
| TAGAAGACGCGGCATTGTAG+AGG | + | chr6_1:93871090-93871109 | Msa0899090:CDS | 50.0% | |
| GAAACGGATGCATCCACAAC+AGG | - | chr6_1:93871487-93871506 | None:intergenic | 50.0% | |
| CACAGACACACGTACATGTC+AGG | + | chr6_1:93871573-93871592 | Msa0899090:CDS | 50.0% | |
| ACCACGCAACAAGTGGAAAC+AGG | - | chr6_1:93872277-93872296 | None:intergenic | 50.0% | |
| ! | TGTTTCCACTTGTTGCGTGG+TGG | + | chr6_1:93872276-93872295 | Msa0899090:intron | 50.0% |
| AATTAGAGAGGCGGCGTTTC+TGG | + | chr6_1:93872358-93872377 | Msa0899090:intron | 50.0% | |
| AGAGATGGAAGGGCTGAATG+CGG | + | chr6_1:93872503-93872522 | Msa0899090:intron | 50.0% | |
| GGGATCAAGATAGGGGATTC+TGG | + | chr6_1:93872561-93872580 | Msa0899090:intron | 50.0% | |
| CATCCTTGGGGAAGATACGA+TGG | + | chr6_1:93872622-93872641 | Msa0899090:intron | 50.0% | |
| TCTCCATCGTATCTTCCCCA+AGG | - | chr6_1:93872628-93872647 | None:intergenic | 50.0% | |
| GAGCTTCTTGCACTGTAGAG+TGG | + | chr6_1:93872768-93872787 | Msa0899090:intron | 50.0% | |
| TTACCTTGGTCTGCTAGTGG+GGG | + | chr6_1:93872807-93872826 | Msa0899090:intron | 50.0% | |
| !! | GTGGAGTAGGTTAGCCTCAA+AGG | + | chr6_1:93873053-93873072 | Msa0899090:intron | 50.0% |
| TGGAGGAGTCCATGGGTTTA+TGG | + | chr6_1:93873139-93873158 | Msa0899090:intron | 50.0% | |
| !! | ACTACAGAGGCGCTTCCTTT+GGG | + | chr6_1:93873221-93873240 | Msa0899090:intron | 50.0% |
| CCTCAGACCACCTAACACAT+AGG | - | chr6_1:93873271-93873290 | None:intergenic | 50.0% | |
| CCTATGTGTTAGGTGGTCTG+AGG | + | chr6_1:93873268-93873287 | Msa0899090:intron | 50.0% | |
| GTTTGCAAGCCGAAGAGTAG+AGG | + | chr6_1:93873290-93873309 | Msa0899090:intron | 50.0% | |
| CCTAGACCTCCTCTACTCTT+CGG | - | chr6_1:93873302-93873321 | None:intergenic | 50.0% | |
| CGAAGAGTAGAGGAGGTCTA+GGG | + | chr6_1:93873300-93873319 | Msa0899090:intron | 50.0% | |
| GAAGAGTAGAGGAGGTCTAG+GGG | + | chr6_1:93873301-93873320 | Msa0899090:intron | 50.0% | |
| TAGAGGAGGTCTAGGGGTTA+GGG | + | chr6_1:93873307-93873326 | Msa0899090:intron | 50.0% | |
| TGCGGGATATCCTCATTGCT+AGG | + | chr6_1:93873402-93873421 | Msa0899090:intron | 50.0% | |
| TTTCATCTGGGTGGCCGTTT+GGG | + | chr6_1:93873446-93873465 | Msa0899090:intron | 50.0% | |
| ! | AAATGTCTCTCAGTGGTGGG+AGG | + | chr6_1:93873478-93873497 | Msa0899090:intron | 50.0% |
| ! | AATGTCTCTCAGTGGTGGGA+GGG | + | chr6_1:93873479-93873498 | Msa0899090:intron | 50.0% |
| GTTCCCATATGGTGTGGTCA+AGG | + | chr6_1:93873543-93873562 | Msa0899090:intron | 50.0% | |
| CCACCTTGACCACACCATAT+GGG | - | chr6_1:93873549-93873568 | None:intergenic | 50.0% | |
| ACCACCTTGACCACACCATA+TGG | - | chr6_1:93873550-93873569 | None:intergenic | 50.0% | |
| ATGGTGTGGTCAAGGTGGTT+CGG | + | chr6_1:93873551-93873570 | Msa0899090:intron | 50.0% | |
| ! | ATGGCCGGTCAACCTCTTTT+TGG | + | chr6_1:93873575-93873594 | Msa0899090:intron | 50.0% |
| ! | TGGCCGGTCAACCTCTTTTT+GGG | + | chr6_1:93873576-93873595 | Msa0899090:intron | 50.0% |
| !!! | CTTTCAGGTTTTGGACCAGC+AGG | + | chr6_1:93873648-93873667 | Msa0899090:intron | 50.0% |
| GGCCAATCAAAATTCCCTGC+TGG | - | chr6_1:93873666-93873685 | None:intergenic | 50.0% | |
| ! | GAAAGTGGGTCTAGGACCTT+AGG | + | chr6_1:93873707-93873726 | Msa0899090:intron | 50.0% |
| ! | GCTTGGTGGCCAATTGATCT+TGG | + | chr6_1:93873761-93873780 | Msa0899090:intron | 50.0% |
| CCCATGTCGAGGATTGTTAG+AGG | + | chr6_1:93873805-93873824 | Msa0899090:intron | 50.0% | |
| GATGCATGCATGACAGCAGT+GGG | + | chr6_1:93873830-93873849 | Msa0899090:intron | 50.0% | |
| ! | TGACAGCAGTGGGTCCTTTT+TGG | + | chr6_1:93873840-93873859 | Msa0899090:intron | 50.0% |
| !! | CAGATTCGGCTTTTCAGGCT+CGG | + | chr6_1:93874145-93874164 | Msa0899090:intron | 50.0% |
| !! | AGATTCGGCTTTTCAGGCTC+GGG | + | chr6_1:93874146-93874165 | Msa0899090:intron | 50.0% |
| TCGGTTTCCTCCTCGATATC+AGG | - | chr6_1:93874823-93874842 | None:intergenic | 50.0% | |
| GTCATCATGAAAACCGGCTG+GGG | - | chr6_1:93874971-93874990 | None:intergenic | 50.0% | |
| GAGTCATCATGAAAACCGGC+TGG | - | chr6_1:93874973-93874992 | None:intergenic | 50.0% | |
| GGCACAACACGAGACAAAAC+AGG | - | chr6_1:93875042-93875061 | None:intergenic | 50.0% | |
| GGATCTTCATACCCTACCTG+CGG | + | chr6_1:93875116-93875135 | Msa0899090:CDS | 50.0% | |
| GCAACACGAAAAGACACTCC+TGG | - | chr6_1:93875243-93875262 | None:intergenic | 50.0% | |
| TTACGGTTCACCTGAGCCTT+TGG | + | chr6_1:93875341-93875360 | Msa0899090:CDS | 50.0% | |
| TTCACCTGAGCCTTTGGACT+TGG | + | chr6_1:93875347-93875366 | Msa0899090:CDS | 50.0% | |
| TCACCTGAGCCTTTGGACTT+GGG | + | chr6_1:93875348-93875367 | Msa0899090:CDS | 50.0% | |
| TTACCCAAGTCCAAAGGCTC+AGG | - | chr6_1:93875354-93875373 | None:intergenic | 50.0% | |
| CGGATCAACAAGAAGCAAGC+GGG | - | chr6_1:93875571-93875590 | None:intergenic | 50.0% | |
| GAACTGGAAAGTTAGCCGAG+TGG | + | chr6_1:93875693-93875712 | Msa0899090:three_prime_UTR | 50.0% | |
| TCTAGCAAAAGCGGCTTCGG+AGG | - | chr6_1:93870855-93870874 | None:intergenic | 55.0% | |
| TCCGTTTCTACAGCCACGCT+AGG | + | chr6_1:93871499-93871518 | Msa0899090:CDS | 55.0% | |
| CCCTAGCGTGGCTGTAGAAA+CGG | - | chr6_1:93871503-93871522 | None:intergenic | 55.0% | |
| CCGTTTCTACAGCCACGCTA+GGG | + | chr6_1:93871500-93871519 | Msa0899090:CDS | 55.0% | |
| CGTTTCTACAGCCACGCTAG+GGG | + | chr6_1:93871501-93871520 | Msa0899090:CDS | 55.0% | |
| GTTTCTACAGCCACGCTAGG+GGG | + | chr6_1:93871502-93871521 | Msa0899090:CDS | 55.0% | |
| AAGGCCCTGCATCTTCTGAG+AGG | + | chr6_1:93871527-93871546 | Msa0899090:CDS | 55.0% | |
| ! | GCCTGTTTCCACTTGTTGCG+TGG | + | chr6_1:93872273-93872292 | Msa0899090:intron | 55.0% |
| CAACTCCACCACGCAACAAG+TGG | - | chr6_1:93872284-93872303 | None:intergenic | 55.0% | |
| ! | CACTTGTTGCGTGGTGGAGT+TGG | + | chr6_1:93872282-93872301 | Msa0899090:intron | 55.0% |
| ! | GCGGAGATCAGAAGTGCAGA+AGG | + | chr6_1:93872522-93872541 | Msa0899090:intron | 55.0% |
| TGACGCCCATCAACTGCTCT+TGG | - | chr6_1:93872717-93872736 | None:intergenic | 55.0% | |
| GAGATCAATCAGGGCTCCTC+CGG | - | chr6_1:93872848-93872867 | None:intergenic | 55.0% | |
| !! | GACTACAGAGGCGCTTCCTT+TGG | + | chr6_1:93873220-93873239 | Msa0899090:intron | 55.0% |
| GCCGCTTAGAACCATCCCAA+AGG | - | chr6_1:93873239-93873258 | None:intergenic | 55.0% | |
| TGCAAGCCGAAGAGTAGAGG+AGG | + | chr6_1:93873293-93873312 | Msa0899090:intron | 55.0% | |
| CCGAAGAGTAGAGGAGGTCT+AGG | + | chr6_1:93873299-93873318 | Msa0899090:intron | 55.0% | |
| GTAGAGGAGGTCTAGGGGTT+AGG | + | chr6_1:93873306-93873325 | Msa0899090:intron | 55.0% | |
| AACGGCCACCCAGATGAAAC+AGG | - | chr6_1:93873445-93873464 | None:intergenic | 55.0% | |
| GTTTCATCTGGGTGGCCGTT+TGG | + | chr6_1:93873445-93873464 | Msa0899090:intron | 55.0% | |
| ! | GGGTGTCTCGTTCTAGGTTC+TGG | + | chr6_1:93873499-93873518 | Msa0899090:intron | 55.0% |
| !! | ATCGGCCACTGGTTCCCATA+TGG | + | chr6_1:93873532-93873551 | Msa0899090:intron | 55.0% |
| CCACACCATATGGGAACCAG+TGG | - | chr6_1:93873540-93873559 | None:intergenic | 55.0% | |
| !! | CCACTGGTTCCCATATGGTG+TGG | + | chr6_1:93873537-93873556 | Msa0899090:intron | 55.0% |
| CCCATATGGTGTGGTCAAGG+TGG | + | chr6_1:93873546-93873565 | Msa0899090:intron | 55.0% | |
| ! | GTGGTCAAGGTGGTTCGGAA+TGG | + | chr6_1:93873556-93873575 | Msa0899090:intron | 55.0% |
| ! | TCAAGGTGGTTCGGAATGGC+CGG | + | chr6_1:93873560-93873579 | Msa0899090:intron | 55.0% |
| ! | TGATTGGCCACATGGGCCAT+TGG | + | chr6_1:93873677-93873696 | Msa0899090:intron | 55.0% |
| ! | GATTGGCCACATGGGCCATT+GGG | + | chr6_1:93873678-93873697 | Msa0899090:intron | 55.0% |
| ! | AGTGGGTCTAGGACCTTAGG+TGG | + | chr6_1:93873710-93873729 | Msa0899090:intron | 55.0% |
| ! | GTCTAGGACCTTAGGTGGAG+TGG | + | chr6_1:93873715-93873734 | Msa0899090:intron | 55.0% |
| TGTTTGGGAGGAGAGCTTGG+TGG | + | chr6_1:93873747-93873766 | Msa0899090:intron | 55.0% | |
| GGATGCATGCATGACAGCAG+TGG | + | chr6_1:93873829-93873848 | Msa0899090:intron | 55.0% | |
| ! | GCCTCCAGATTCGGCTTTTC+AGG | + | chr6_1:93874140-93874159 | Msa0899090:intron | 55.0% |
| GCCTGAAAAGCCGAATCTGG+AGG | - | chr6_1:93874144-93874163 | None:intergenic | 55.0% | |
| CGAGCCTGAAAAGCCGAATC+TGG | - | chr6_1:93874147-93874166 | None:intergenic | 55.0% | |
| !! | GATTCGGCTTTTCAGGCTCG+GGG | + | chr6_1:93874147-93874166 | Msa0899090:intron | 55.0% |
| !! | ATTCGGCTTTTCAGGCTCGG+GGG | + | chr6_1:93874148-93874167 | Msa0899090:intron | 55.0% |
| CTTCATACCCTACCTGCGGT+TGG | + | chr6_1:93875120-93875139 | Msa0899090:CDS | 55.0% | |
| TAGTCCTCCAACCGCAGGTA+GGG | - | chr6_1:93875130-93875149 | None:intergenic | 55.0% | |
| TGAACTAGTCCTCCAACCGC+AGG | - | chr6_1:93875135-93875154 | None:intergenic | 55.0% | |
| TTGGCGGAGACAGCTCGAAT+TGG | + | chr6_1:93875175-93875194 | Msa0899090:CDS | 55.0% | |
| TGGCGGAGACAGCTCGAATT+GGG | + | chr6_1:93875176-93875195 | Msa0899090:CDS | 55.0% | |
| GGAGACAGCTCGAATTGGGT+TGG | + | chr6_1:93875180-93875199 | Msa0899090:CDS | 55.0% | |
| GACCAACTTTCCGAGGGCCA+CGG | + | chr6_1:93870496-93870515 | Msa0899090:CDS | 60.0% | |
| TCCATCCATCGTGGAAGCCG+TGG | - | chr6_1:93870516-93870535 | None:intergenic | 60.0% | |
| ! | GAGGCGGCGTTTCTGGATTC+AGG | + | chr6_1:93872365-93872384 | Msa0899090:intron | 60.0% |
| ! | TCCTCCGGTTGACTTCCTGC+GGG | - | chr6_1:93872833-93872852 | None:intergenic | 60.0% |
| ! | CTCCTCCGGTTGACTTCCTG+CGG | - | chr6_1:93872834-93872853 | None:intergenic | 60.0% |
| !! | CAGAGGCGCTTCCTTTGGGA+TGG | + | chr6_1:93873225-93873244 | Msa0899090:intron | 60.0% |
| CTAGGGGGCAAGCTCTGTTG+CGG | + | chr6_1:93873384-93873403 | Msa0899090:intron | 60.0% | |
| TAGGGGGCAAGCTCTGTTGC+GGG | + | chr6_1:93873385-93873404 | Msa0899090:intron | 60.0% | |
| ATCTGGGTGGCCGTTTGGGT+GGG | + | chr6_1:93873450-93873469 | Msa0899090:intron | 60.0% | |
| !! | GTGGGAGGGTGTCTCGTTCT+AGG | + | chr6_1:93873493-93873512 | Msa0899090:intron | 60.0% |
| GGATGACCACTAGGTGGCAG+CGG | + | chr6_1:93873597-93873616 | Msa0899090:intron | 60.0% | |
| CCATTGGGCAGGGGGAAAGT+GGG | + | chr6_1:93873693-93873712 | Msa0899090:intron | 60.0% | |
| GATCTCGCTCTCCCATGTCG+AGG | + | chr6_1:93873794-93873813 | Msa0899090:intron | 60.0% | |
| !! | TTCGGCTTTTCAGGCTCGGG+GGG | + | chr6_1:93874149-93874168 | Msa0899090:intron | 60.0% |
| CATACCCTACCTGCGGTTGG+AGG | + | chr6_1:93875123-93875142 | Msa0899090:CDS | 60.0% | |
| CTAGTCCTCCAACCGCAGGT+AGG | - | chr6_1:93875131-93875150 | None:intergenic | 60.0% | |
| AGCCGTGGCCCTCGGAAAGT+TGG | - | chr6_1:93870501-93870520 | None:intergenic | 65.0% | |
| ATCGTGGAAGCCGTGGCCCT+CGG | - | chr6_1:93870509-93870528 | None:intergenic | 65.0% | |
| GCCACGGCTTCCACGATGGA+TGG | + | chr6_1:93870512-93870531 | Msa0899090:CDS | 65.0% | |
| ACAGCCACGCTAGGGGGAGA+AGG | + | chr6_1:93871508-93871527 | Msa0899090:CDS | 65.0% | |
| CATCTGGGTGGCCGTTTGGG+TGG | + | chr6_1:93873449-93873468 | Msa0899090:intron | 65.0% | |
| GCCACATGGGCCATTGGGCA+GGG | + | chr6_1:93873683-93873702 | Msa0899090:intron | 65.0% | |
| CCACATGGGCCATTGGGCAG+GGG | + | chr6_1:93873684-93873703 | Msa0899090:intron | 65.0% | |
| CACATGGGCCATTGGGCAGG+GGG | + | chr6_1:93873685-93873704 | Msa0899090:intron | 65.0% | |
| GCCATTGGGCAGGGGGAAAG+TGG | + | chr6_1:93873692-93873711 | Msa0899090:intron | 65.0% | |
| CCCACTTTCCCCCTGCCCAA+TGG | - | chr6_1:93873696-93873715 | None:intergenic | 65.0% | |
| GGCAGGGGGAAAGTGGGTCT+AGG | + | chr6_1:93873699-93873718 | Msa0899090:intron | 65.0% | |
| !! | TCGGCTTTTCAGGCTCGGGG+GGG | + | chr6_1:93874150-93874169 | Msa0899090:intron | 65.0% |
| !! | CTTTTCAGGCTCGGGGGGGA+GGG | + | chr6_1:93874154-93874173 | Msa0899090:intron | 65.0% |
| !! | TTTTCAGGCTCGGGGGGGAG+GGG | + | chr6_1:93874155-93874174 | Msa0899090:intron | 65.0% |
| GAGGGCCACGGCTTCCACGA+TGG | + | chr6_1:93870508-93870527 | Msa0899090:CDS | 70.0% | |
| AGGGCCTTCTCCCCCTAGCG+TGG | - | chr6_1:93871515-93871534 | None:intergenic | 70.0% | |
| GGGCCCCCACTAGCAGACCA+AGG | - | chr6_1:93872813-93872832 | None:intergenic | 70.0% | |
| GGGGCCCGCAGGAAGTCAAC+CGG | + | chr6_1:93872826-93872845 | Msa0899090:intron | 70.0% | |
| GCCCGCAGGAAGTCAACCGG+AGG | + | chr6_1:93872829-93872848 | Msa0899090:intron | 70.0% | |
| !! | AGGGTGCCGCTGCCACCTAG+TGG | - | chr6_1:93873606-93873625 | None:intergenic | 70.0% |
| GGCCACATGGGCCATTGGGC+AGG | + | chr6_1:93873682-93873701 | Msa0899090:intron | 70.0% | |
| CCCCTGCCCAATGGCCCATG+TGG | - | chr6_1:93873687-93873706 | None:intergenic | 70.0% | |
| !! | GCTTTTCAGGCTCGGGGGGG+AGG | + | chr6_1:93874153-93874172 | Msa0899090:intron | 70.0% |
| GGGGGGGAGGGGATAGGTCT+AGG | + | chr6_1:93874166-93874185 | Msa0899090:intron | 70.0% | |
| GTCTGCTAGTGGGGGCCCGC+AGG | + | chr6_1:93872815-93872834 | Msa0899090:intron | 75.0% | |
| AGGCTCGGGGGGGAGGGGAT+AGG | + | chr6_1:93874160-93874179 | Msa0899090:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 93869088 | 93876118 | 93869088 | ID=Msa0899090;Name=Msa0899090 |
| chr6_1 | mRNA | 93869088 | 93876118 | 93869088 | ID=Msa0899090-mRNA-1;Parent=Msa0899090;Name=Msa0899090-mRNA-1;_AED=0.04;_eAED=0.04;_QI=203|1|1|1|1|1|9|456|698 |
| chr6_1 | exon | 93869088 | 93869334 | 93869088 | ID=Msa0899090-mRNA-1:exon:15926;Parent=Msa0899090-mRNA-1 |
| chr6_1 | exon | 93870365 | 93870538 | 93870365 | ID=Msa0899090-mRNA-1:exon:15927;Parent=Msa0899090-mRNA-1 |
| chr6_1 | exon | 93870712 | 93871111 | 93870712 | ID=Msa0899090-mRNA-1:exon:15928;Parent=Msa0899090-mRNA-1 |
| chr6_1 | exon | 93871334 | 93871614 | 93871334 | ID=Msa0899090-mRNA-1:exon:15929;Parent=Msa0899090-mRNA-1 |
| chr6_1 | exon | 93871706 | 93871774 | 93871706 | ID=Msa0899090-mRNA-1:exon:15930;Parent=Msa0899090-mRNA-1 |
| chr6_1 | exon | 93871981 | 93872037 | 93871981 | ID=Msa0899090-mRNA-1:exon:15931;Parent=Msa0899090-mRNA-1 |
| chr6_1 | exon | 93874421 | 93874473 | 93874421 | ID=Msa0899090-mRNA-1:exon:15932;Parent=Msa0899090-mRNA-1 |
| chr6_1 | exon | 93874561 | 93874636 | 93874561 | ID=Msa0899090-mRNA-1:exon:15933;Parent=Msa0899090-mRNA-1 |
| chr6_1 | exon | 93874720 | 93876118 | 93874720 | ID=Msa0899090-mRNA-1:exon:15934;Parent=Msa0899090-mRNA-1 |
| chr6_1 | five_prime_UTR | 93869088 | 93869290 | 93869088 | ID=Msa0899090-mRNA-1:five_prime_utr;Parent=Msa0899090-mRNA-1 |
| chr6_1 | CDS | 93869291 | 93869334 | 93869291 | ID=Msa0899090-mRNA-1:cds;Parent=Msa0899090-mRNA-1 |
| chr6_1 | CDS | 93870365 | 93870538 | 93870365 | ID=Msa0899090-mRNA-1:cds;Parent=Msa0899090-mRNA-1 |
| chr6_1 | CDS | 93870712 | 93871111 | 93870712 | ID=Msa0899090-mRNA-1:cds;Parent=Msa0899090-mRNA-1 |
| chr6_1 | CDS | 93871334 | 93871614 | 93871334 | ID=Msa0899090-mRNA-1:cds;Parent=Msa0899090-mRNA-1 |
| chr6_1 | CDS | 93871706 | 93871774 | 93871706 | ID=Msa0899090-mRNA-1:cds;Parent=Msa0899090-mRNA-1 |
| chr6_1 | CDS | 93871981 | 93872037 | 93871981 | ID=Msa0899090-mRNA-1:cds;Parent=Msa0899090-mRNA-1 |
| chr6_1 | CDS | 93874421 | 93874473 | 93874421 | ID=Msa0899090-mRNA-1:cds;Parent=Msa0899090-mRNA-1 |
| chr6_1 | CDS | 93874561 | 93874636 | 93874561 | ID=Msa0899090-mRNA-1:cds;Parent=Msa0899090-mRNA-1 |
| chr6_1 | CDS | 93874720 | 93875662 | 93874720 | ID=Msa0899090-mRNA-1:cds;Parent=Msa0899090-mRNA-1 |
| chr6_1 | three_prime_UTR | 93875663 | 93876118 | 93875663 | ID=Msa0899090-mRNA-1:three_prime_utr;Parent=Msa0899090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
