AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0902640

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0902640 MtrunA17_Chr2g0303321 94.468 470 18 1 1 462 388 857 0.0 880
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0902640 AT4G19490.1 59.627 483 170 5 1 462 409 887 2.56e-175 519
Msa0902640 AT4G19490.2 59.627 483 170 5 1 462 409 887 2.56e-175 519

Find 123 sgRNAs with CRISPR-Local

Find 529 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATTGGATGCATTGTCTTC+TGG 0.094351 6_1:-101278765 Msa0902640:CDS
ATTTCAATATATAGTTATTT+AGG 0.207794 6_1:+101275765 None:intergenic
TTACATAGCAGTGTATTAAT+TGG 0.213788 6_1:-101276218 Msa0902640:three_prime_UTR
TGTAAGATGGGCAAAGCTTC+TGG 0.226028 6_1:-101279234 Msa0902640:CDS
GATTTACTATGACCTCTATT+TGG 0.232799 6_1:+101278597 None:intergenic
GATTTACAATTCCTCATATA+AGG 0.242498 6_1:-101276248 Msa0902640:exon
CATTGGATGCATTGTCTTCT+GGG 0.257495 6_1:-101278764 Msa0902640:CDS
TTATCTTCTTCAACACCATT+AGG 0.265383 6_1:+101278738 None:intergenic
TATTCAGTTAGGAACCTTAT+TGG 0.270945 6_1:+101275949 None:intergenic
TACCATGAACCTCACTTTCT+TGG 0.288818 6_1:+101280072 None:intergenic
TTCAAACAGTTACCATGATT+TGG 0.290772 6_1:-101278715 Msa0902640:CDS
AGGTATCGGGTGGTATTGAT+AGG 0.304808 6_1:+101275720 None:intergenic
TGACAAAATGTGATAGAAAA+TGG 0.307825 6_1:-101275646 Msa0902640:three_prime_UTR
CTAAATTGTGTTCAGGTGTC+TGG 0.311583 6_1:-101276691 Msa0902640:intron
TTCATACATGCTATTATTCC+TGG 0.325788 6_1:-101276616 Msa0902640:intron
ATGCAATATTTGTATTCATT+AGG 0.341909 6_1:+101275810 None:intergenic
ACAAACTCAAATAATCTGTT+AGG 0.364563 6_1:+101275700 None:intergenic
TTTATATAAATAAGACCATT+TGG 0.366027 6_1:+101275901 None:intergenic
CTATCTCCACCCATGTTTCC+TGG 0.367597 6_1:+101278829 None:intergenic
TGCAGTAATTTGTATTGATT+AGG 0.370535 6_1:+101275850 None:intergenic
TGCCAGCGCCAGGTGTTTAG+AGG 0.373233 6_1:+101276654 None:intergenic
GGTCTTATTTATATAAACTA+AGG 0.375175 6_1:-101275895 Msa0902640:three_prime_UTR
CATTTCTGGTGTAAGAAATT+CGG 0.375373 6_1:-101276498 Msa0902640:intron
TATCTTCTTCAACACCATTA+GGG 0.375458 6_1:+101278739 None:intergenic
GAAGCTCGAGCAGCAATAAC+TGG 0.375937 6_1:+101283790 None:intergenic
CTAACAGATTGGTGGAAGAT+TGG 0.380927 6_1:-101279039 Msa0902640:intron
TTGTCTTCTGGGGACCCTAA+TGG 0.382958 6_1:-101278753 Msa0902640:CDS
GAACATGTCAACTTGTGCTT+GGG 0.388495 6_1:-101277802 Msa0902640:CDS
ACCATGAACCTCACTTTCTT+GGG 0.391003 6_1:+101280073 None:intergenic
TATTGATTAGGAGTGGTTAC+AGG 0.397265 6_1:+101275862 None:intergenic
AAATTAATAGATATTATGTT+AGG 0.398692 6_1:-101276100 Msa0902640:three_prime_UTR
TTGGTTATCACATGGTAAAC+TGG 0.405375 6_1:-101278506 Msa0902640:intron
AGATTGAGAATTATTCAGTT+AGG 0.422188 6_1:+101275938 None:intergenic
GTAAGATGGGCAAAGCTTCT+GGG 0.422472 6_1:-101279233 Msa0902640:CDS
TAACAGATTGGTGGAAGATT+GGG 0.423692 6_1:-101279038 Msa0902640:intron
TTGATTGTCAGCATGATTCT+CGG 0.424026 6_1:-101278971 Msa0902640:CDS
TCAAATAATCTGTTAGGTAT+CGG 0.424668 6_1:+101275706 None:intergenic
CCAACACCTTTGTAGAAAAG+AGG 0.433653 6_1:+101278525 None:intergenic
AAGAATATTGTAATAGAGGA+AGG 0.440446 6_1:-101276126 Msa0902640:three_prime_UTR
TCCGTGAAAAGATGGACCCT+TGG 0.445255 6_1:+101280013 None:intergenic
CAAATAATCTGTTAGGTATC+GGG 0.453542 6_1:+101275707 None:intergenic
CGCCAGGTGTTTAGAGGTGA+TGG 0.456248 6_1:+101276660 None:intergenic
ATAATGGATTGAAATTCATC+AGG 0.457894 6_1:+101278801 None:intergenic
GTTGCTCAAAATCCATTCAA+TGG 0.459861 6_1:+101280166 None:intergenic
TGTATTCATTAGGAGCAGTT+AGG 0.461706 6_1:+101275820 None:intergenic
ATTTGGTTTCTTAGATTCAT+CGG 0.461938 6_1:+101278614 None:intergenic
CAAAGGAAAAGTAGAGGGAT+TGG 0.466005 6_1:+101276157 None:intergenic
CTGTAGCTGTAATGAACTCA+TGG 0.467812 6_1:+101279147 None:intergenic
GGGAAGTTTAGCCTGAGAAT+AGG 0.476577 6_1:+101283891 None:intergenic
TGATTGTCAGCATGATTCTC+GGG 0.478005 6_1:-101278970 Msa0902640:intron
ACGCAGAAGCTCATGTAAGA+TGG 0.479024 6_1:-101279247 Msa0902640:CDS
TGACTTGACTTGCCAGCGCC+AGG 0.481429 6_1:+101276644 None:intergenic
TCCCAAGAAAGTGAGGTTCA+TGG 0.483565 6_1:-101280074 Msa0902640:CDS
TCCCTACTGTTGTTGCCAAA+TGG 0.486129 6_1:-101275916 Msa0902640:three_prime_UTR
CATTGTTAGTCGCCAAATCA+TGG 0.493682 6_1:+101278703 None:intergenic
CGCAGAAGCTCATGTAAGAT+GGG 0.498479 6_1:-101279246 Msa0902640:CDS
CCATCCTAGGTTGAAACTGC+AGG 0.501496 6_1:-101279195 Msa0902640:CDS
AGAACATGTCAACTTGTGCT+TGG 0.502388 6_1:-101277803 Msa0902640:CDS
TGAAAACAGCACTCAAAAGA+TGG 0.505515 6_1:+101283362 None:intergenic
TGCTGCTCGAGCTTCAGAAT+CGG 0.505667 6_1:-101283782 Msa0902640:CDS
GACTGTCCAGTGTCTGCCAT+CGG 0.509078 6_1:+101278672 None:intergenic
CTGAAGATAGTGCTGGCAAA+AGG 0.511487 6_1:+101277870 None:intergenic
CTGACAATCAATAAAAGCCT+TGG 0.511746 6_1:+101278983 None:intergenic
TTCTGGAGACAGAGCTGTAG+AGG 0.513880 6_1:-101283752 Msa0902640:CDS
GAATATTGTAATAGAGGAAG+GGG 0.521907 6_1:-101276124 Msa0902640:three_prime_UTR
CCACTCAAAGGAAAAGTAGA+GGG 0.522711 6_1:+101276152 None:intergenic
CACCTCTAAACACCTGGCGC+TGG 0.532318 6_1:-101276656 Msa0902640:CDS
GCTCGGCCGATGGCAGACAC+TGG 0.534162 6_1:-101278678 Msa0902640:CDS
CCTGCAGTTTCAACCTAGGA+TGG 0.534902 6_1:+101279195 None:intergenic
GAATCTAAGAAACCAAATAG+AGG 0.536720 6_1:-101278609 Msa0902640:CDS
GTCTTATTTATATAAACTAA+GGG 0.546964 6_1:-101275894 Msa0902640:three_prime_UTR
AGAATATTGTAATAGAGGAA+GGG 0.548667 6_1:-101276125 Msa0902640:three_prime_UTR
TCATTGCAAGGGAGACTACA+TGG 0.548928 6_1:+101276184 None:intergenic
CAGTGCTTGACCAGGAAACA+TGG 0.550225 6_1:-101278839 Msa0902640:CDS
ACCTCAAAAGAATGTTGCCA+AGG 0.555014 6_1:-101280030 Msa0902640:CDS
ATTGCAGGCACATTTAGTGC+GGG 0.556696 6_1:-101280207 Msa0902640:intron
GACCATTTGGCAACAACAGT+AGG 0.560981 6_1:+101275914 None:intergenic
GCTTGGGGCTAAAGCAATGC+AGG 0.562696 6_1:-101277786 Msa0902640:intron
TCCACTCAAAGGAAAAGTAG+AGG 0.563123 6_1:+101276151 None:intergenic
TCCGTGCTACTCTCCATCCT+AGG 0.564248 6_1:-101279208 Msa0902640:CDS
CCAGAAGACAATGCATCCAA+TGG 0.565992 6_1:+101278765 None:intergenic
ATTGGATGCATTGTCTTCTG+GGG 0.566027 6_1:-101278763 Msa0902640:CDS
GTTGCTGCAGCAATTGCGCA+TGG 0.566203 6_1:-101280116 Msa0902640:CDS
AATTAAAACTAACAGATTGG+TGG 0.567362 6_1:-101279047 Msa0902640:intron
ACCATTTGGCAACAACAGTA+GGG 0.567455 6_1:+101275915 None:intergenic
TAACAATGATGCTCGGCCGA+TGG 0.569587 6_1:-101278688 Msa0902640:CDS
AGACATTGATCGAGTCGCGC+AGG 0.571184 6_1:-101276425 Msa0902640:intron
CTAAAGTGCTGAGTAACTGA+AGG 0.576601 6_1:-101275672 Msa0902640:three_prime_UTR
TAAGATGGGCAAAGCTTCTG+GGG 0.577135 6_1:-101279232 Msa0902640:CDS
ACAACTTCTGAAGATAGTGC+TGG 0.578492 6_1:+101277863 None:intergenic
AATTATGGCAGTGCTTGACC+AGG 0.579081 6_1:-101278847 Msa0902640:CDS
GGTATCGGGTGGTATTGATA+GGG 0.579270 6_1:+101275721 None:intergenic
GTCCATCACCTCTAAACACC+TGG 0.580720 6_1:-101276662 Msa0902640:CDS
CGATAGATCCTCAGAACAGA+GGG 0.581171 6_1:+101283871 None:intergenic
GCAGGCACATTTAGTGCGGG+CGG 0.584583 6_1:-101280204 Msa0902640:intron
GACAGAGCTGTAGAGGCAGA+TGG 0.588172 6_1:-101283745 Msa0902640:intron
CTAAACTTCCCTCTGTTCTG+AGG 0.589450 6_1:-101283879 Msa0902640:five_prime_UTR
TAATTTGTATTGATTAGGAG+TGG 0.592339 6_1:+101275855 None:intergenic
CCGTGGGATACTGCATTCAC+AGG 0.596765 6_1:-101279006 Msa0902640:CDS
CAAAGGTGTTGGTTATCACA+TGG 0.608161 6_1:-101278514 Msa0902640:CDS
GATACTGCATTCACAGGCCA+AGG 0.608690 6_1:-101279000 Msa0902640:CDS
GGGATTGGAGAATCATTGCA+AGG 0.608732 6_1:+101276172 None:intergenic
AACTGGAAGCAACTCAGCAA+CGG 0.610286 6_1:+101283807 None:intergenic
GATTGCAGGCACATTTAGTG+CGG 0.612804 6_1:-101280208 Msa0902640:intron
AACTCCTGCAGTTTCAACCT+AGG 0.615419 6_1:+101279191 None:intergenic
AGAAATATCCCAAGAAAGTG+AGG 0.616680 6_1:-101280081 Msa0902640:CDS
AGATTGGGATACAACATCCG+TGG 0.627179 6_1:-101279023 Msa0902640:CDS
CCTCAAAAGAATGTTGCCAA+GGG 0.627962 6_1:-101280029 Msa0902640:CDS
GGATTGGAGAATCATTGCAA+GGG 0.631385 6_1:+101276173 None:intergenic
TTCAGAAGTTGTTCTCCGTG+TGG 0.635037 6_1:-101277852 Msa0902640:CDS
AGAGAGATGTCTCTTCTCTG+AGG 0.638428 6_1:+101275983 None:intergenic
AACATGTCAACTTGTGCTTG+GGG 0.638733 6_1:-101277801 Msa0902640:CDS
ACCTAGGATGGAGAGTAGCA+CGG 0.649176 6_1:+101279207 None:intergenic
TGGCGACTAACAATGATGCT+CGG 0.651360 6_1:-101278695 Msa0902640:CDS
GATTGGGATACAACATCCGT+GGG 0.664663 6_1:-101279022 Msa0902640:CDS
GCTTGACCAGGAAACATGGG+TGG 0.669451 6_1:-101278835 Msa0902640:CDS
ACTTCAAGATTTCTACCACA+CGG 0.672850 6_1:+101277837 None:intergenic
ATAATCTGTTAGGTATCGGG+TGG 0.673521 6_1:+101275710 None:intergenic
TCGATAGATCCTCAGAACAG+AGG 0.676616 6_1:+101283870 None:intergenic
TGTAGCTGTAATGAACTCAT+GGG 0.683392 6_1:+101279148 None:intergenic
AGTGCTTGACCAGGAAACAT+GGG 0.683888 6_1:-101278838 Msa0902640:CDS
CCTGTGAATGCAGTATCCCA+CGG 0.692228 6_1:+101279006 None:intergenic
AAGATGGGCAAAGCTTCTGG+GGG 0.726966 6_1:-101279231 Msa0902640:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAAATTAAATCTTATATAT+GGG - chr6_1:101275743-101275762 Msa0902640:three_prime_UTR 10.0%
!! TATAAAACAAAATTTATTGT+TGG + chr6_1:101277361-101277380 None:intergenic 10.0%
!!! AAATAGTTTTTATATCTAAA+AGG + chr6_1:101281698-101281717 None:intergenic 10.0%
!! TTATTTAAAAAAAAACGAAA+TGG + chr6_1:101282008-101282027 None:intergenic 10.0%
!! AAATTAATAGATATTATGTT+AGG - chr6_1:101283326-101283345 Msa0902640:intron 10.0%
!! ATTTCAATATATAGTTATTT+AGG + chr6_1:101283664-101283683 None:intergenic 10.0%
!! CAGAAATTAAATCTTATATA+TGG - chr6_1:101275742-101275761 Msa0902640:three_prime_UTR 15.0%
!!! TTTATTGATAGTAATGAAAA+TGG - chr6_1:101276380-101276399 Msa0902640:intron 15.0%
!! TTAAAAAACAAAGAATGAAA+TGG + chr6_1:101276824-101276843 None:intergenic 15.0%
!!! ATTCTTTGTTTTTTAAGTTA+CGG - chr6_1:101276828-101276847 Msa0902640:intron 15.0%
!! ATATAATTTGATATGTGATT+CGG + chr6_1:101277284-101277303 None:intergenic 15.0%
!! TACCAAAATAAAAAAAAAAG+TGG - chr6_1:101277610-101277629 Msa0902640:intron 15.0%
!! ACCAAAATAAAAAAAAAAGT+GGG - chr6_1:101277611-101277630 Msa0902640:intron 15.0%
!!! TTAATACTACTAAATGTTTT+GGG + chr6_1:101277724-101277743 None:intergenic 15.0%
!!! ATTAATACTACTAAATGTTT+TGG + chr6_1:101277725-101277744 None:intergenic 15.0%
!!! AGTTTATTTTCAATTACTAT+TGG - chr6_1:101277909-101277928 Msa0902640:CDS 15.0%
!! GGAATAAAAAATAACTAAAA+AGG + chr6_1:101278249-101278268 None:intergenic 15.0%
!! TCTAAGTATTATAAAAGTTA+AGG + chr6_1:101278786-101278805 None:intergenic 15.0%
!!! AAAAATTTCAGGTTAAATAT+AGG - chr6_1:101279472-101279491 Msa0902640:intron 15.0%
!!! AAAAGTACATATTTTCATTT+TGG - chr6_1:101280303-101280322 Msa0902640:intron 15.0%
!! AGTTTAAATTTCAAATTATG+TGG - chr6_1:101280331-101280350 Msa0902640:intron 15.0%
!!! AAACTGAAAAATAACATTTT+GGG + chr6_1:101281257-101281276 None:intergenic 15.0%
!!! AAAACTGAAAAATAACATTT+TGG + chr6_1:101281258-101281277 None:intergenic 15.0%
!! AAAGTTGAAAATAATAACTT+TGG + chr6_1:101281342-101281361 None:intergenic 15.0%
!!! AAAGTTATTATTTTCAACTT+TGG - chr6_1:101281341-101281360 Msa0902640:intron 15.0%
!!! AAGTTATTATTTTCAACTTT+GGG - chr6_1:101281342-101281361 Msa0902640:intron 15.0%
!! AAGAGAAAAATTTATTGTAT+TGG + chr6_1:101281838-101281857 None:intergenic 15.0%
!!! ATATTAGGTTTTTATCAAAT+TGG + chr6_1:101282066-101282085 None:intergenic 15.0%
!! ATTTCAGATATGAATATATT+AGG + chr6_1:101282081-101282100 None:intergenic 15.0%
!!! ATATCTGAAATAGAAAATAA+TGG - chr6_1:101282090-101282109 Msa0902640:intron 15.0%
!! TTTATATAAATAAGACCATT+TGG + chr6_1:101283528-101283547 None:intergenic 15.0%
!!! GTCTTATTTATATAAACTAA+GGG - chr6_1:101283532-101283551 Msa0902640:intron 15.0%
!!! AATTATATCTTTTAACAACA+TGG - chr6_1:101283898-101283917 Msa0902640:five_prime_UTR 15.0%
!!! ATTATATCTTTTAACAACAT+GGG - chr6_1:101283899-101283918 Msa0902640:five_prime_UTR 15.0%
!! ATAGCATAACTATTGATATT+TGG - chr6_1:101275715-101275734 Msa0902640:three_prime_UTR 20.0%
!! ATTAAATCTTATATATGGGT+TGG - chr6_1:101275747-101275766 Msa0902640:three_prime_UTR 20.0%
!! TTAAATCTTATATATGGGTT+GGG - chr6_1:101275748-101275767 Msa0902640:three_prime_UTR 20.0%
!! ACATCTCATAAAATGTAAAT+AGG - chr6_1:101275896-101275915 Msa0902640:three_prime_UTR 20.0%
!!! TGTTTTCTACCAATTTAAAT+AGG - chr6_1:101276353-101276372 Msa0902640:intron 20.0%
!!! GTTTTCTACCAATTTAAATA+GGG - chr6_1:101276354-101276373 Msa0902640:intron 20.0%
!! ATTCTATTATTTAACCCTAA+TGG - chr6_1:101276555-101276574 Msa0902640:intron 20.0%
!! TTCTATTATTTAACCCTAAT+GGG - chr6_1:101276556-101276575 Msa0902640:intron 20.0%
!! CATTAGGATTAAATAATAAG+AGG + chr6_1:101276582-101276601 None:intergenic 20.0%
!! CTCTTATTATTTAATCCTAA+TGG - chr6_1:101276580-101276599 Msa0902640:intron 20.0%
!!! TTAAGTTGATTATTAGTAAG+TGG + chr6_1:101276607-101276626 None:intergenic 20.0%
!! AAATTAGTAGGTGATTAATT+AGG + chr6_1:101276631-101276650 None:intergenic 20.0%
!!! AGATGTTTTAAGAAATTAGT+AGG + chr6_1:101276643-101276662 None:intergenic 20.0%
!!! ATTTTTTATGCAACTTTACT+CGG + chr6_1:101276732-101276751 None:intergenic 20.0%
!! TTCCCTAATTATGAATAATA+CGG + chr6_1:101276985-101277004 None:intergenic 20.0%
!! TATATATATATTGAGAGATG+AGG + chr6_1:101277453-101277472 None:intergenic 20.0%
!! ATATATGTGAAAATTGCAAA+AGG + chr6_1:101277532-101277551 None:intergenic 20.0%
!!! ACCCACTTTTTTTTTTATTT+TGG + chr6_1:101277615-101277634 None:intergenic 20.0%
!!! CATAAACAAAATGGTATTTT+AGG + chr6_1:101277674-101277693 None:intergenic 20.0%
!!! CTAAAATACCATTTTGTTTA+TGG - chr6_1:101277672-101277691 Msa0902640:intron 20.0%
!! ATGTATCTAGTAATTTGAAA+TGG - chr6_1:101277771-101277790 Msa0902640:intron 20.0%
!!! TGTATCTAGTAATTTGAAAT+GGG - chr6_1:101277772-101277791 Msa0902640:intron 20.0%
!!! ACACTTTTTTTTTTTTTGTC+TGG - chr6_1:101277809-101277828 Msa0902640:CDS 20.0%
!!! TTTTTTTTGTCTGGAAAAAA+AGG - chr6_1:101277818-101277837 Msa0902640:CDS 20.0%
!!! GTTATTTTTTATTCCTTAAC+CGG - chr6_1:101278254-101278273 Msa0902640:intron 20.0%
!!! TATTGTATTTTCTTGTATCA+AGG + chr6_1:101278330-101278349 None:intergenic 20.0%
!! ATTAAAACCAATCTAACATA+TGG + chr6_1:101278890-101278909 None:intergenic 20.0%
!! TATATTTCATGTACAAGAAT+AGG - chr6_1:101279086-101279105 Msa0902640:intron 20.0%
!! CAAATATGTCAAAAAATTTC+AGG - chr6_1:101279461-101279480 Msa0902640:intron 20.0%
!! CAATTAAAACACAAAAGTAA+TGG + chr6_1:101280094-101280113 None:intergenic 20.0%
!! TTGAGAACATGAAATAAATT+GGG + chr6_1:101280120-101280139 None:intergenic 20.0%
!! TTTGAGAACATGAAATAAAT+TGG + chr6_1:101280121-101280140 None:intergenic 20.0%
!!! CAATCTGTTAGTTTTAATTT+GGG + chr6_1:101280378-101280397 None:intergenic 20.0%
!!! AACTGAAAAATAACATTTTG+GGG + chr6_1:101281256-101281275 None:intergenic 20.0%
!! AAATTAACCGTATTAACTAT+TGG + chr6_1:101281388-101281407 None:intergenic 20.0%
!!! ATAAGTTAGAATCAATTTTC+AGG - chr6_1:101281936-101281955 Msa0902640:intron 20.0%
!!! TAAGTTAGAATCAATTTTCA+GGG - chr6_1:101281937-101281956 Msa0902640:intron 20.0%
!!! TGGTTTTATTGGAAATATTT+TGG + chr6_1:101282226-101282245 None:intergenic 20.0%
!!! TATGAAAATATTTTGGGTAA+CGG + chr6_1:101282286-101282305 None:intergenic 20.0%
!! TGTTATAATAGAATGAGTTT+GGG + chr6_1:101282332-101282351 None:intergenic 20.0%
!! AACTCTAAGTTAATTGAAAT+GGG + chr6_1:101282687-101282706 None:intergenic 20.0%
!! AAACTCTAAGTTAATTGAAA+TGG + chr6_1:101282688-101282707 None:intergenic 20.0%
!!! ATTTTTTCTAAATTGTGTTC+AGG - chr6_1:101282728-101282747 Msa0902640:intron 20.0%
!!! TTTATGAAATTGTTGTTACA+CGG - chr6_1:101282879-101282898 Msa0902640:intron 20.0%
!! GAAAAAGAATATTGTAATAG+AGG - chr6_1:101283296-101283315 Msa0902640:intron 20.0%
!!! TCTTTTGTTTCTCTTTAATT+CGG + chr6_1:101283355-101283374 None:intergenic 20.0%
!!! GGTCTTATTTATATAAACTA+AGG - chr6_1:101283531-101283550 Msa0902640:intron 20.0%
!! ATGCAATATTTGTATTCATT+AGG + chr6_1:101283619-101283638 None:intergenic 20.0%
!! TAAATCTTATATATGGGTTG+GGG - chr6_1:101275749-101275768 Msa0902640:three_prime_UTR 25.0%
!! ACTCAAACATAATTTTTGTG+TGG - chr6_1:101275804-101275823 Msa0902640:three_prime_UTR 25.0%
! AACAAATTGTTACTGTTCAA+TGG + chr6_1:101275858-101275877 None:intergenic 25.0%
!!! GAAAAGTGCTTATAAAAGAA+AGG + chr6_1:101275954-101275973 None:intergenic 25.0%
! TACAAGAATTATAGTCTAGA+TGG + chr6_1:101276128-101276147 None:intergenic 25.0%
!! ATAAAGCACCCTATTTAAAT+TGG + chr6_1:101276365-101276384 None:intergenic 25.0%
!! ACAGAATAAGTTTTCTGTTA+GGG + chr6_1:101276486-101276505 None:intergenic 25.0%
! TCCCGTATTATTCATAATTA+GGG - chr6_1:101276980-101276999 Msa0902640:intron 25.0%
! TCCCTAATTATGAATAATAC+GGG + chr6_1:101276984-101277003 None:intergenic 25.0%
! ATAATTAGGGAACATTACTT+AGG - chr6_1:101276993-101277012 Msa0902640:intron 25.0%
! TTTACAATATCTCAACACTT+GGG + chr6_1:101277104-101277123 None:intergenic 25.0%
!! TTTTACAATATCTCAACACT+TGG + chr6_1:101277105-101277124 None:intergenic 25.0%
! GAGATATTGTAAAATAGTCT+TGG - chr6_1:101277111-101277130 Msa0902640:intron 25.0%
! CAATAGGATAATATCTAAAC+TGG + chr6_1:101277139-101277158 None:intergenic 25.0%
! ATATTATCCTATTGTATTCC+TGG - chr6_1:101277145-101277164 Msa0902640:intron 25.0%
! TATTATCCTATTGTATTCCT+GGG - chr6_1:101277146-101277165 Msa0902640:intron 25.0%
! AGGTAAGATAATCAACTAAA+AGG + chr6_1:101277189-101277208 None:intergenic 25.0%
!! GTATCTAGTAATTTGAAATG+GGG - chr6_1:101277773-101277792 Msa0902640:intron 25.0%
! TGAAATGGGGATTATATTTA+CGG - chr6_1:101277786-101277805 Msa0902640:intron 25.0%
! AAAAAAAGGAGCTTATATTG+AGG - chr6_1:101277832-101277851 Msa0902640:CDS 25.0%
!! ACTGTATTTTCATGTATCAA+TGG + chr6_1:101277892-101277911 None:intergenic 25.0%
! TCAAAATGATATCTATAGCA+AGG + chr6_1:101278018-101278037 None:intergenic 25.0%
! ATGTATATGCTTTACCTTAA+GGG - chr6_1:101278151-101278170 Msa0902640:intron 25.0%
! AATAACTAAAAAGGACACTT+GGG + chr6_1:101278240-101278259 None:intergenic 25.0%
! AAATAACTAAAAAGGACACT+TGG + chr6_1:101278241-101278260 None:intergenic 25.0%
!! TATTTTCTTGTATCAAGGAA+AGG + chr6_1:101278325-101278344 None:intergenic 25.0%
! CTACGGAAGATTTATTATAT+AGG - chr6_1:101278538-101278557 Msa0902640:CDS 25.0%
!! ACCTAAAGACATTTTATTCA+TGG - chr6_1:101278814-101278833 Msa0902640:CDS 25.0%
!! AACTTTTCCATATGTTAGAT+TGG - chr6_1:101278880-101278899 Msa0902640:intron 25.0%
! CATTAAACCTTCATTATCAA+TGG - chr6_1:101278968-101278987 Msa0902640:intron 25.0%
!!! TTACATGTTTTTTCTTCCTA+GGG - chr6_1:101279046-101279065 Msa0902640:intron 25.0%
! AAAGGTAAATTTCAGTAACA+TGG + chr6_1:101279134-101279153 None:intergenic 25.0%
!!! TTTTTCTTTTTAGTGATTGC+AGG - chr6_1:101279204-101279223 Msa0902640:CDS 25.0%
! TTGTTCTAATACACTTGTAA+TGG - chr6_1:101279499-101279518 Msa0902640:intron 25.0%
! AAGCATGTAATTTATGATGT+AGG - chr6_1:101279559-101279578 Msa0902640:intron 25.0%
! TATACTCCATTAGATAGTTT+AGG + chr6_1:101279610-101279629 None:intergenic 25.0%
! ACTGTTGATACTTTATTGAA+TGG - chr6_1:101279736-101279755 Msa0902640:intron 25.0%
! CAAATGTAATATATTGAACG+AGG - chr6_1:101279762-101279781 Msa0902640:intron 25.0%
! TACGAATAAGGATTCTATAA+AGG + chr6_1:101279794-101279813 None:intergenic 25.0%
! TTTATAGAATCCTTATTCGT+AGG - chr6_1:101279793-101279812 Msa0902640:intron 25.0%
! TTGACATATAAATAGTGTTC+TGG + chr6_1:101279834-101279853 None:intergenic 25.0%
!!! GTTTTACACTAAAAGCATTA+TGG - chr6_1:101279904-101279923 Msa0902640:intron 25.0%
! TTTCATGTTCTCAAAAAATC+TGG - chr6_1:101280126-101280145 Msa0902640:CDS 25.0%
!!! CCAATCTGTTAGTTTTAATT+TGG + chr6_1:101280379-101280398 None:intergenic 25.0%
! CCAAATTAAAACTAACAGAT+TGG - chr6_1:101280376-101280395 Msa0902640:intron 25.0%
! AATTAAAACTAACAGATTGG+TGG - chr6_1:101280379-101280398 Msa0902640:intron 25.0%
! CATTTAGGTGTCAAAAATTA+TGG - chr6_1:101280564-101280583 Msa0902640:intron 25.0%
!!! ATAATGGATTGAAATTCATC+AGG + chr6_1:101280628-101280647 None:intergenic 25.0%
!! ATTTGGTTTCTTAGATTCAT+CGG + chr6_1:101280815-101280834 None:intergenic 25.0%
! AATAGTAGTTGCATACAATA+GGG + chr6_1:101280982-101281001 None:intergenic 25.0%
! AACAATTATTATGGAACAGA+AGG + chr6_1:101281211-101281230 None:intergenic 25.0%
! CGCAAATGTAACAATTATTA+TGG + chr6_1:101281220-101281239 None:intergenic 25.0%
!! ACTGAAAAATAACATTTTGG+GGG + chr6_1:101281255-101281274 None:intergenic 25.0%
! GAATCAACCAATAGTTAATA+CGG - chr6_1:101281378-101281397 Msa0902640:intron 25.0%
!! TGTATTGTTCTCTGAATTTT+TGG - chr6_1:101281670-101281689 Msa0902640:intron 25.0%
! TGATTTCTGCAAAAGAATTT+AGG - chr6_1:101281756-101281775 Msa0902640:intron 25.0%
!! AAGTTAGAATCAATTTTCAG+GGG - chr6_1:101281938-101281957 Msa0902640:intron 25.0%
! AATAAATATTAGAAGCTCCA+AGG - chr6_1:101282023-101282042 Msa0902640:intron 25.0%
!!! TGGTAATAGAATGGTTTTAT+TGG + chr6_1:101282237-101282256 None:intergenic 25.0%
!!! CTTTTTTCTTGGTAATAGAA+TGG + chr6_1:101282246-101282265 None:intergenic 25.0%
! TTACCAAGAAAAAAGATGAT+AGG - chr6_1:101282251-101282270 Msa0902640:intron 25.0%
! TTATAATAGAATGAGTTTGG+GGG + chr6_1:101282330-101282349 None:intergenic 25.0%
! GTTATAATAGAATGAGTTTG+GGG + chr6_1:101282331-101282350 None:intergenic 25.0%
! CTGTTATAATAGAATGAGTT+TGG + chr6_1:101282333-101282352 None:intergenic 25.0%
! ACATTAGTTGAAATCTGATA+GGG + chr6_1:101282452-101282471 None:intergenic 25.0%
! ATGCTGAGTTAAAAAATTCA+CGG - chr6_1:101282560-101282579 Msa0902640:intron 25.0%
!!! TTAGAGTTTTGTCATTCTTT+TGG - chr6_1:101282699-101282718 Msa0902640:intron 25.0%
! ATAACTTTGTTCTTCATTTC+TGG - chr6_1:101282914-101282933 Msa0902640:intron 25.0%
!! AATAGCAATTTTCTATTCTC+TGG + chr6_1:101282975-101282994 None:intergenic 25.0%
!! TTTTCAATGAATATCTTTGC+TGG - chr6_1:101283102-101283121 Msa0902640:intron 25.0%
! GATTTACAATTCCTCATATA+AGG - chr6_1:101283178-101283197 Msa0902640:intron 25.0%
!! GTAAATTTTCACCTTATATG+AGG + chr6_1:101283192-101283211 None:intergenic 25.0%
! TTACATAGCAGTGTATTAAT+TGG - chr6_1:101283208-101283227 Msa0902640:intron 25.0%
!! AATATTCTTTTTCCACTCAA+AGG + chr6_1:101283289-101283308 None:intergenic 25.0%
! AAGAATATTGTAATAGAGGA+AGG - chr6_1:101283300-101283319 Msa0902640:intron 25.0%
! AGAATATTGTAATAGAGGAA+GGG - chr6_1:101283301-101283320 Msa0902640:intron 25.0%
!!! CTTTTGTTTCTCTTTAATTC+GGG + chr6_1:101283354-101283373 None:intergenic 25.0%
! AGATTGAGAATTATTCAGTT+AGG + chr6_1:101283491-101283510 None:intergenic 25.0%
!!! TAATTTGTATTGATTAGGAG+TGG + chr6_1:101283574-101283593 None:intergenic 25.0%
!!! TGCAGTAATTTGTATTGATT+AGG + chr6_1:101283579-101283598 None:intergenic 25.0%
! TCAAATAATCTGTTAGGTAT+CGG + chr6_1:101283723-101283742 None:intergenic 25.0%
! ACAAACTCAAATAATCTGTT+AGG + chr6_1:101283729-101283748 None:intergenic 25.0%
! TGACAAAATGTGATAGAAAA+TGG - chr6_1:101283780-101283799 Msa0902640:CDS 25.0%
! TTTATGGTTTTCCTATTCTC+AGG - chr6_1:101275524-101275543 Msa0902640:three_prime_UTR 30.0%
!! AAATCTTATATATGGGTTGG+GGG - chr6_1:101275750-101275769 Msa0902640:three_prime_UTR 30.0%
AATTGTTACTGTTCAATGGT+TGG + chr6_1:101275854-101275873 None:intergenic 30.0%
CTAATGTTTAATAGTGACTC+AGG - chr6_1:101275987-101276006 Msa0902640:three_prime_UTR 30.0%
ACACATTAATGATATCTTGC+CGG - chr6_1:101276186-101276205 Msa0902640:three_prime_UTR 30.0%
ACAGATGGTTTATAAAGCAA+AGG + chr6_1:101276283-101276302 None:intergenic 30.0%
AAGCAAGAAGAAAAAACAGA+TGG + chr6_1:101276298-101276317 None:intergenic 30.0%
!!! ATCTGTTTTTTCTTCTTGCT+TGG - chr6_1:101276297-101276316 Msa0902640:intron 30.0%
ATTATTGTTAATTCGCTTGC+TGG - chr6_1:101276324-101276343 Msa0902640:intron 30.0%
! GACAGAATAAGTTTTCTGTT+AGG + chr6_1:101276487-101276506 None:intergenic 30.0%
TCTCTTTATCTGTATGTACA+GGG + chr6_1:101276533-101276552 None:intergenic 30.0%
TTCTCTTTATCTGTATGTAC+AGG + chr6_1:101276534-101276553 None:intergenic 30.0%
AAATAATAAGAGGCCCATTA+GGG + chr6_1:101276572-101276591 None:intergenic 30.0%
TAAATAATAAGAGGCCCATT+AGG + chr6_1:101276573-101276592 None:intergenic 30.0%
TTATTAGTAAGTGGTCCATT+AGG + chr6_1:101276598-101276617 None:intergenic 30.0%
GGCATTATCAGGAAAATTAT+GGG + chr6_1:101276711-101276730 None:intergenic 30.0%
AAACAAAGAATGAAATGGAG+TGG + chr6_1:101276819-101276838 None:intergenic 30.0%
ACTCCAAGAAAATTTGATCT+TGG - chr6_1:101276862-101276881 Msa0902640:intron 30.0%
! TGTCCAAGATCAAATTTTCT+TGG + chr6_1:101276868-101276887 None:intergenic 30.0%
TTGTAGTGTAAGGAAGAAAA+AGG - chr6_1:101276910-101276929 Msa0902640:intron 30.0%
CTAATTATGAATAATACGGG+AGG + chr6_1:101276981-101277000 None:intergenic 30.0%
CTCCCGTATTATTCATAATT+AGG - chr6_1:101276979-101276998 Msa0902640:intron 30.0%
TTACTTAGGAAACACCTATA+TGG - chr6_1:101277007-101277026 Msa0902640:intron 30.0%
TAGGTACTTACTTTCCATAT+AGG + chr6_1:101277024-101277043 None:intergenic 30.0%
TATGGAAAGTAAGTACCTAA+AGG - chr6_1:101277025-101277044 Msa0902640:intron 30.0%
CTAATTAATCGCGAAAGATT+AGG + chr6_1:101277209-101277228 None:intergenic 30.0%
CTAATCTTTCGCGATTAATT+AGG - chr6_1:101277207-101277226 Msa0902640:intron 30.0%
ATATATATTGAGAGATGAGG+AGG + chr6_1:101277450-101277469 None:intergenic 30.0%
! GCAAAAGGAGCATATAATAA+TGG + chr6_1:101277517-101277536 None:intergenic 30.0%
GAACACATCCATAAACAAAA+TGG + chr6_1:101277683-101277702 None:intergenic 30.0%
TACTATTGGTATTCATAGCA+AGG - chr6_1:101277923-101277942 Msa0902640:intron 30.0%
! ATATTTCTATACACGTGAGA+TGG - chr6_1:101278044-101278063 Msa0902640:intron 30.0%
CTAGTAGTAGGATTAATGAT+AGG + chr6_1:101278090-101278109 None:intergenic 30.0%
!! TATCAAGATTTGCTAGTAGT+AGG + chr6_1:101278102-101278121 None:intergenic 30.0%
GATGTATATGCTTTACCTTA+AGG - chr6_1:101278150-101278169 Msa0902640:intron 30.0%
TGTATATGCTTTACCTTAAG+GGG - chr6_1:101278152-101278171 Msa0902640:intron 30.0%
TAATATCCTGATTGTGTTTC+TGG - chr6_1:101278206-101278225 Msa0902640:intron 30.0%
ATAATACCAGAAACACAATC+AGG + chr6_1:101278215-101278234 None:intergenic 30.0%
!!! TTTTTTATTCCTTAACCGGT+AGG - chr6_1:101278258-101278277 Msa0902640:intron 30.0%
! TTTTTATTCCTTAACCGGTA+GGG - chr6_1:101278259-101278278 Msa0902640:intron 30.0%
ATAGCATAGAGCATAATGAT+CGG + chr6_1:101278370-101278389 None:intergenic 30.0%
GAAACAAAACTAAACACTCA+AGG + chr6_1:101278423-101278442 None:intergenic 30.0%
AGCTAGGATATATTTACAGA+AGG - chr6_1:101278582-101278601 Msa0902640:CDS 30.0%
GACAAAGAATTTCTAAACCA+GGG + chr6_1:101278743-101278762 None:intergenic 30.0%
AGACAAAGAATTTCTAAACC+AGG + chr6_1:101278744-101278763 None:intergenic 30.0%
GCCATGAATAAAATGTCTTT+AGG + chr6_1:101278818-101278837 None:intergenic 30.0%
! TACTGCATAATTTTGTCTCT+TGG - chr6_1:101278943-101278962 Msa0902640:intron 30.0%
TAGTCAATAATCCCTTTCTT+GGG + chr6_1:101279000-101279019 None:intergenic 30.0%
ATAGTCAATAATCCCTTTCT+TGG + chr6_1:101279001-101279020 None:intergenic 30.0%
!!! CTTACATGTTTTTTCTTCCT+AGG - chr6_1:101279045-101279064 Msa0902640:intron 30.0%
AGAATAGGTATTATGTGTCT+AGG - chr6_1:101279101-101279120 Msa0902640:intron 30.0%
GAATAGGTATTATGTGTCTA+GGG - chr6_1:101279102-101279121 Msa0902640:intron 30.0%
ACTGAAATTTACCTTTCCAA+TGG - chr6_1:101279138-101279157 Msa0902640:intron 30.0%
AAGTGAAAAAAGCCATTGAA+TGG - chr6_1:101279248-101279267 Msa0902640:CDS 30.0%
!!! ACATTCTTTTGAGGTGAATA+TGG + chr6_1:101279391-101279410 None:intergenic 30.0%
!! CTTGTAATGGAAAGTTTTTC+TGG - chr6_1:101279512-101279531 Msa0902640:intron 30.0%
! GGATTCTTTTGTGTTTAGAT+TGG - chr6_1:101279533-101279552 Msa0902640:intron 30.0%
GAAACACCTAAACTATCTAA+TGG - chr6_1:101279601-101279620 Msa0902640:intron 30.0%
AAAAAGAGTTCCTACGAATA+AGG + chr6_1:101279806-101279825 None:intergenic 30.0%
!!! AGCCTGGTTTTTAAAATGAT+GGG + chr6_1:101279936-101279955 None:intergenic 30.0%
!!! TAGCCTGGTTTTTAAAATGA+TGG + chr6_1:101279937-101279956 None:intergenic 30.0%
! TTAATTTGGGAGTTCAATCA+GGG + chr6_1:101280365-101280384 None:intergenic 30.0%
!! TTTAATTTGGGAGTTCAATC+AGG + chr6_1:101280366-101280385 None:intergenic 30.0%
!!! TAGAGATGAACAGTTTTTTG+AGG + chr6_1:101280526-101280545 None:intergenic 30.0%
! TGGAAAAAGCGTATTGATAA+TGG + chr6_1:101280644-101280663 None:intergenic 30.0%
!!! TATCAATACGCTTTTTCCAT+TGG - chr6_1:101280645-101280664 Msa0902640:intron 30.0%
TATCTTCTTCAACACCATTA+GGG + chr6_1:101280690-101280709 None:intergenic 30.0%
TTATCTTCTTCAACACCATT+AGG + chr6_1:101280691-101280710 None:intergenic 30.0%
TTCAAACAGTTACCATGATT+TGG - chr6_1:101280711-101280730 Msa0902640:intron 30.0%
GAATCTAAGAAACCAAATAG+AGG - chr6_1:101280817-101280836 Msa0902640:intron 30.0%
GATTTACTATGACCTCTATT+TGG + chr6_1:101280832-101280851 None:intergenic 30.0%
ATAGTAGTTGCATACAATAG+GGG + chr6_1:101280981-101281000 None:intergenic 30.0%
GAATAGTAGTTGCATACAAT+AGG + chr6_1:101280983-101281002 None:intergenic 30.0%
! TACTAATTAGAGGGCATAAT+TGG + chr6_1:101281305-101281324 None:intergenic 30.0%
TACACACGATACTAATTAGA+GGG + chr6_1:101281314-101281333 None:intergenic 30.0%
ATACACACGATACTAATTAG+AGG + chr6_1:101281315-101281334 None:intergenic 30.0%
! ATTCTTTTGCAGAAATCACT+TGG + chr6_1:101281754-101281773 None:intergenic 30.0%
! AATGATAATGAGTGATGAGA+TGG + chr6_1:101281814-101281833 None:intergenic 30.0%
!! TATAAGACCATTTTTCCCTA+TGG + chr6_1:101281889-101281908 None:intergenic 30.0%
AAAAAAACGAAATGGAAGCA+TGG + chr6_1:101282000-101282019 None:intergenic 30.0%
!!! ATTGGAAATATTTTGGCTTG+AGG + chr6_1:101282219-101282238 None:intergenic 30.0%
!!! CAACCTATCATCTTTTTTCT+TGG + chr6_1:101282257-101282276 None:intergenic 30.0%
!! AATATTTTGGGTAACGGTTA+TGG + chr6_1:101282280-101282299 None:intergenic 30.0%
!! AGGGGGTATGAAAATATTTT+GGG + chr6_1:101282292-101282311 None:intergenic 30.0%
TATAATAGAATGAGTTTGGG+GGG + chr6_1:101282329-101282348 None:intergenic 30.0%
AAAGGTCCATTATTAATGTG+GGG + chr6_1:101282417-101282436 None:intergenic 30.0%
GAAAGGTCCATTATTAATGT+GGG + chr6_1:101282418-101282437 None:intergenic 30.0%
TGAAAGGTCCATTATTAATG+TGG + chr6_1:101282419-101282438 None:intergenic 30.0%
ATAGGGTCACTATTAATGAA+AGG + chr6_1:101282435-101282454 None:intergenic 30.0%
CACATTAGTTGAAATCTGAT+AGG + chr6_1:101282453-101282472 None:intergenic 30.0%
TTCATACATGCTATTATTCC+TGG - chr6_1:101282810-101282829 Msa0902640:intron 30.0%
!! CATTTCTGGTGTAAGAAATT+CGG - chr6_1:101282928-101282947 Msa0902640:intron 30.0%
! TTCTTTCTTTTCCTGCTTAT+AGG - chr6_1:101283141-101283160 Msa0902640:intron 30.0%
! TCTTTCTTTTCCTGCTTATA+GGG - chr6_1:101283142-101283161 Msa0902640:intron 30.0%
GAATATTGTAATAGAGGAAG+GGG - chr6_1:101283302-101283321 Msa0902640:intron 30.0%
!!! TAGGAACCTTATTGGTTTTT+GGG + chr6_1:101283472-101283491 None:intergenic 30.0%
!!! TTAGGAACCTTATTGGTTTT+TGG + chr6_1:101283473-101283492 None:intergenic 30.0%
TATTCAGTTAGGAACCTTAT+TGG + chr6_1:101283480-101283499 None:intergenic 30.0%
CAAATAATCTGTTAGGTATC+GGG + chr6_1:101283722-101283741 None:intergenic 30.0%
GATTGTTACTGTTCAATGGT+TGG + chr6_1:101275832-101275851 None:intergenic 35.0%
GTTGGATTGTTACTGTTCAA+TGG + chr6_1:101275836-101275855 None:intergenic 35.0%
ATGTTTAATAGTGACTCAGG+TGG - chr6_1:101275990-101276009 Msa0902640:three_prime_UTR 35.0%
TGAAAACAGCACTCAAAAGA+TGG + chr6_1:101276067-101276086 None:intergenic 35.0%
!!! TGCTGTTTTCATGATTGTAC+AGG - chr6_1:101276076-101276095 Msa0902640:three_prime_UTR 35.0%
ATACACAGACTCTGCAATTA+AGG - chr6_1:101276240-101276259 Msa0902640:exon 35.0%
CTCTTTATCTGTATGTACAG+GGG + chr6_1:101276532-101276551 None:intergenic 35.0%
TTCTGACTATGCATGTTGTT+AGG + chr6_1:101276676-101276695 None:intergenic 35.0%
CGGCATTATCAGGAAAATTA+TGG + chr6_1:101276712-101276731 None:intergenic 35.0%
ATCTTGGACACTAGAAATTG+TGG - chr6_1:101276878-101276897 Msa0902640:intron 35.0%
! GATATGAGTGTTGTAGTGTA+AGG - chr6_1:101276900-101276919 Msa0902640:intron 35.0%
! AAGAGAAGTCTTGTACCTAA+TGG - chr6_1:101276954-101276973 Msa0902640:intron 35.0%
AATGTGGAAATGCTACCTTT+AGG + chr6_1:101277043-101277062 None:intergenic 35.0%
CAATGGAAGTTTCTTCAATG+TGG + chr6_1:101277059-101277078 None:intergenic 35.0%
CACATTGAAGAAACTTCCAT+TGG - chr6_1:101277057-101277076 Msa0902640:intron 35.0%
AAGAATCCCAGGAATACAAT+AGG + chr6_1:101277155-101277174 None:intergenic 35.0%
ACACTATCCAATTGTTACAC+TGG - chr6_1:101277412-101277431 Msa0902640:intron 35.0%
CATTACACCAGTGTAACAAT+TGG + chr6_1:101277422-101277441 None:intergenic 35.0%
!!! CCACTTTTGTTTTGTTTCGA+GGG + chr6_1:101277581-101277600 None:intergenic 35.0%
CCTCGAAACAAAACAAAAGT+GGG - chr6_1:101277579-101277598 Msa0902640:intron 35.0%
!!! ACTAAATGTTTTGGGAGATG+AGG + chr6_1:101277716-101277735 None:intergenic 35.0%
TAAAAACTAGGTTACCCTTG+AGG + chr6_1:101277972-101277991 None:intergenic 35.0%
!!! GGGTAACCTAGTTTTTAGTT+CGG - chr6_1:101277975-101277994 Msa0902640:intron 35.0%
CTATAGCAAGGTTTCTCTTT+GGG + chr6_1:101278006-101278025 None:intergenic 35.0%
TCTATAGCAAGGTTTCTCTT+TGG + chr6_1:101278007-101278026 None:intergenic 35.0%
ACGTGAGATGGAATCTAAAT+AGG - chr6_1:101278056-101278075 Msa0902640:intron 35.0%
AGTAACTTAGAGACTAAGCT+AGG - chr6_1:101278566-101278585 Msa0902640:CDS 35.0%
GCTAAGTAACTTAGAGAGTA+AGG - chr6_1:101278627-101278646 Msa0902640:CDS 35.0%
TCTTTGTCTTGACAATCTTG+TGG - chr6_1:101278755-101278774 Msa0902640:CDS 35.0%
! CATTTTATTCATGGCAGACA+AGG - chr6_1:101278823-101278842 Msa0902640:CDS 35.0%
!! GCAATAGCCATTGATAATGA+AGG + chr6_1:101278978-101278997 None:intergenic 35.0%
TAAAGTGCAAACCATTGGAA+AGG + chr6_1:101279152-101279171 None:intergenic 35.0%
GTTGCTCAAAATCCATTCAA+TGG + chr6_1:101279263-101279282 None:intergenic 35.0%
AGAAATATCCCAAGAAAGTG+AGG - chr6_1:101279345-101279364 Msa0902640:intron 35.0%
AGGTGAATATGGCAAAAATG+TGG + chr6_1:101279380-101279399 None:intergenic 35.0%
!! ATTGCTTTTCCGTGAAAAGA+TGG + chr6_1:101279424-101279443 None:intergenic 35.0%
!! GATTGAACTTTCGAGTTAAC+TGG + chr6_1:101279860-101279879 None:intergenic 35.0%
ACTCGAAAGTTCAATCTGAT+AGG - chr6_1:101279864-101279883 Msa0902640:intron 35.0%
TTCAATCTGATAGGTGAAGA+AGG - chr6_1:101279873-101279892 Msa0902640:intron 35.0%
!! GTCCCATCATTTTAAAAACC+AGG - chr6_1:101279931-101279950 Msa0902640:intron 35.0%
AAATTGGACAGAATTGTGAG+AGG - chr6_1:101279964-101279983 Msa0902640:intron 35.0%
TGTAGCTGTAATGAACTCAT+GGG + chr6_1:101280281-101280300 None:intergenic 35.0%
TAACAGATTGGTGGAAGATT+GGG - chr6_1:101280388-101280407 Msa0902640:intron 35.0%
CTGACAATCAATAAAAGCCT+TGG + chr6_1:101280446-101280465 None:intergenic 35.0%
TTGATTGTCAGCATGATTCT+CGG - chr6_1:101280455-101280474 Msa0902640:intron 35.0%
TTCTCGGGTCAGTTTAAATT+TGG - chr6_1:101280471-101280490 Msa0902640:intron 35.0%
ATATCCCTTGCTTTGCATTT+AGG - chr6_1:101280549-101280568 Msa0902640:intron 35.0%
! TCTCAACCTCTTTTCTACAA+AGG - chr6_1:101280895-101280914 Msa0902640:intron 35.0%
TTGGTTATCACATGGTAAAC+TGG - chr6_1:101280920-101280939 Msa0902640:intron 35.0%
TTATCACATGGTAAACTGGT+TGG - chr6_1:101280924-101280943 Msa0902640:intron 35.0%
TAGTAGTTGCATACAATAGG+GGG + chr6_1:101280980-101280999 None:intergenic 35.0%
CTCTCTTAATATGCTTGTGT+AGG - chr6_1:101281065-101281084 Msa0902640:intron 35.0%
! ATATCTTCTGTTTCTTCCAG+TGG - chr6_1:101281488-101281507 Msa0902640:intron 35.0%
ACTTCAAGATTTCTACCACA+CGG + chr6_1:101281592-101281611 None:intergenic 35.0%
GGTCAAACTAAAAGAGATAG+AGG + chr6_1:101281786-101281805 None:intergenic 35.0%
ATGAGTGATGAGATGGATAA+TGG + chr6_1:101281807-101281826 None:intergenic 35.0%
TTCAACACCATAGGGAAAAA+TGG - chr6_1:101281879-101281898 Msa0902640:intron 35.0%
ATTGGAACAGGATGAAAGTA+AGG + chr6_1:101281969-101281988 None:intergenic 35.0%
TTCTGTTGTACAGTTACAGA+GGG + chr6_1:101282145-101282164 None:intergenic 35.0%
TTTCTGTTGTACAGTTACAG+AGG + chr6_1:101282146-101282165 None:intergenic 35.0%
!!! GAAATATTTTGGCTTGAGGA+AGG + chr6_1:101282215-101282234 None:intergenic 35.0%
!! GAGGGGGTATGAAAATATTT+TGG + chr6_1:101282293-101282312 None:intergenic 35.0%
ATAATAGAATGAGTTTGGGG+GGG + chr6_1:101282328-101282347 None:intergenic 35.0%
AAGGTCCATTATTAATGTGG+GGG + chr6_1:101282416-101282435 None:intergenic 35.0%
TGTGTTAATGAAACCCATCT+TGG - chr6_1:101282469-101282488 Msa0902640:intron 35.0%
GTGTTAATGAAACCCATCTT+GGG - chr6_1:101282470-101282489 Msa0902640:intron 35.0%
TGTTAATGAAACCCATCTTG+GGG - chr6_1:101282471-101282490 Msa0902640:intron 35.0%
CATAAGTCTACTCTATCAGA+TGG + chr6_1:101283056-101283075 None:intergenic 35.0%
! CTTTCTTTTCCTGCTTATAG+GGG - chr6_1:101283143-101283162 Msa0902640:intron 35.0%
AATATTCATCCCCTATAAGC+AGG + chr6_1:101283155-101283174 None:intergenic 35.0%
!!! TTTTGCTCTAGGATTACAGA+GGG + chr6_1:101283420-101283439 None:intergenic 35.0%
! TATTGATTAGGAGTGGTTAC+AGG + chr6_1:101283567-101283586 None:intergenic 35.0%
TGTATTCATTAGGAGCAGTT+AGG + chr6_1:101283609-101283628 None:intergenic 35.0%
! TCAGAATCGGAGTTCTTTTC+TGG - chr6_1:101275657-101275676 Msa0902640:three_prime_UTR 40.0%
TTTAATAGTGACTCAGGTGG+TGG - chr6_1:101275993-101276012 Msa0902640:three_prime_UTR 40.0%
GTATGTACAGGGGAATTCTT+AGG + chr6_1:101276522-101276541 None:intergenic 40.0%
CAACTTTACTCGGCATTATC+AGG + chr6_1:101276722-101276741 None:intergenic 40.0%
AGGAAGAAAAAGGTCAGACA+TGG - chr6_1:101276920-101276939 Msa0902640:intron 40.0%
AATAATACGGGAGGACCATT+AGG + chr6_1:101276972-101276991 None:intergenic 40.0%
TCAATGCTTCTAATCGCCAA+TGG + chr6_1:101277076-101277095 None:intergenic 40.0%
AGAAACTAGCAAAGAATCCC+AGG + chr6_1:101277166-101277185 None:intergenic 40.0%
CCCTCGAAACAAAACAAAAG+TGG - chr6_1:101277578-101277597 Msa0902640:intron 40.0%
!!! CCCACTTTTGTTTTGTTTCG+AGG + chr6_1:101277582-101277601 None:intergenic 40.0%
GGAGCTTATATTGAGGAACA+AGG - chr6_1:101277839-101277858 Msa0902640:CDS 40.0%
CCTTGAGGACACAAAGAATA+GGG + chr6_1:101277957-101277976 None:intergenic 40.0%
CCTATTCTTTGTGTCCTCAA+GGG - chr6_1:101277955-101277974 Msa0902640:intron 40.0%
GCATCACCGAACTAAAAACT+AGG + chr6_1:101277984-101278003 None:intergenic 40.0%
TTAACCTGATCAATCCCTAC+CGG + chr6_1:101278276-101278295 None:intergenic 40.0%
ACATGAATCAAAATGCTCCC+TGG - chr6_1:101278723-101278742 Msa0902640:CDS 40.0%
AATGGCTATTGCCCAAGAAA+GGG - chr6_1:101278986-101279005 Msa0902640:CDS 40.0%
GCTGATAAAGTGCAAACCAT+TGG + chr6_1:101279157-101279176 None:intergenic 40.0%
! TGGATTTTGAGCAACTGTGA+TGG - chr6_1:101279268-101279287 Msa0902640:CDS 40.0%
ACCATGAACCTCACTTTCTT+GGG + chr6_1:101279356-101279375 None:intergenic 40.0%
TACCATGAACCTCACTTTCT+TGG + chr6_1:101279357-101279376 None:intergenic 40.0%
ACCTCAAAAGAATGTTGCCA+AGG - chr6_1:101279396-101279415 Msa0902640:intron 40.0%
CCTCAAAAGAATGTTGCCAA+GGG - chr6_1:101279397-101279416 Msa0902640:intron 40.0%
! AGTTTAGGTGTTTCTGTGAG+AGG + chr6_1:101279595-101279614 None:intergenic 40.0%
ACCAGGCTACAAAACGAAAT+TGG - chr6_1:101279948-101279967 Msa0902640:intron 40.0%
! TCCAATTTCGTTTTGTAGCC+TGG + chr6_1:101279952-101279971 None:intergenic 40.0%
CTTAAGGGAACAGAAAGTAG+TGG + chr6_1:101280027-101280046 None:intergenic 40.0%
GCAAACCACTCAAGTCTTAA+GGG + chr6_1:101280042-101280061 None:intergenic 40.0%
GCAATACATCAGCTCTGTTT+AGG + chr6_1:101280153-101280172 None:intergenic 40.0%
CTGTAGCTGTAATGAACTCA+TGG + chr6_1:101280282-101280301 None:intergenic 40.0%
CTAACAGATTGGTGGAAGAT+TGG - chr6_1:101280387-101280406 Msa0902640:intron 40.0%
TGATTGTCAGCATGATTCTC+GGG - chr6_1:101280456-101280475 Msa0902640:intron 40.0%
GACACCTAAATGCAAAGCAA+GGG + chr6_1:101280556-101280575 None:intergenic 40.0%
TGACACCTAAATGCAAAGCA+AGG + chr6_1:101280557-101280576 None:intergenic 40.0%
CATTGGATGCATTGTCTTCT+GGG - chr6_1:101280662-101280681 Msa0902640:intron 40.0%
ATTGGATGCATTGTCTTCTG+GGG - chr6_1:101280663-101280682 Msa0902640:intron 40.0%
CATTGTTAGTCGCCAAATCA+TGG + chr6_1:101280726-101280745 None:intergenic 40.0%
CCAACACCTTTGTAGAAAAG+AGG + chr6_1:101280904-101280923 None:intergenic 40.0%
!! CCTCTTTTCTACAAAGGTGT+TGG - chr6_1:101280901-101280920 Msa0902640:intron 40.0%
!! CAAAGGTGTTGGTTATCACA+TGG - chr6_1:101280912-101280931 Msa0902640:intron 40.0%
AAATGCATTCTCACAGCTGA+GGG + chr6_1:101281457-101281476 None:intergenic 40.0%
TAAATGCATTCTCACAGCTG+AGG + chr6_1:101281458-101281477 None:intergenic 40.0%
! ACAACTTCTGAAGATAGTGC+TGG + chr6_1:101281566-101281585 None:intergenic 40.0%
AGAACATGTCAACTTGTGCT+TGG - chr6_1:101281623-101281642 Msa0902640:intron 40.0%
GAACATGTCAACTTGTGCTT+GGG - chr6_1:101281624-101281643 Msa0902640:intron 40.0%
AACATGTCAACTTGTGCTTG+GGG - chr6_1:101281625-101281644 Msa0902640:intron 40.0%
! TCCCTATGGTGTTGAATGTT+GGG + chr6_1:101281875-101281894 None:intergenic 40.0%
! TTCCCTATGGTGTTGAATGT+TGG + chr6_1:101281876-101281895 None:intergenic 40.0%
ATGGATGAGAAGATTGGAAC+AGG + chr6_1:101281981-101282000 None:intergenic 40.0%
GCTCTGCAATTTACAATCTG+AGG - chr6_1:101282114-101282133 Msa0902640:intron 40.0%
GTAGAAACGAAGAAGACAGT+TGG - chr6_1:101282181-101282200 Msa0902640:intron 40.0%
TAATAGAATGAGTTTGGGGG+GGG + chr6_1:101282327-101282346 None:intergenic 40.0%
TTCTCCCCCCACATTAATAA+TGG - chr6_1:101282408-101282427 Msa0902640:intron 40.0%
AGGTCCATTATTAATGTGGG+GGG + chr6_1:101282415-101282434 None:intergenic 40.0%
CAATATATGCTCCCCAAGAT+GGG + chr6_1:101282485-101282504 None:intergenic 40.0%
TCAATATATGCTCCCCAAGA+TGG + chr6_1:101282486-101282505 None:intergenic 40.0%
GCTTATATATTGTCCTGCAC+TGG - chr6_1:101282520-101282539 Msa0902640:intron 40.0%
TTTAACTCAGCATTGTCCTG+CGG + chr6_1:101282553-101282572 None:intergenic 40.0%
AACAGCTGCAGCATTTACTT+AGG + chr6_1:101282622-101282641 None:intergenic 40.0%
!!! GCTGCAGCTGTTGATTTTTT+CGG - chr6_1:101282630-101282649 Msa0902640:intron 40.0%
CTAAATTGTGTTCAGGTGTC+TGG - chr6_1:101282735-101282754 Msa0902640:intron 40.0%
AAGTCTACTCTATCAGATGG+AGG + chr6_1:101283053-101283072 None:intergenic 40.0%
GGATTGGAGAATCATTGCAA+GGG + chr6_1:101283256-101283275 None:intergenic 40.0%
CAAAGGAAAAGTAGAGGGAT+TGG + chr6_1:101283272-101283291 None:intergenic 40.0%
CCACTCAAAGGAAAAGTAGA+GGG + chr6_1:101283277-101283296 None:intergenic 40.0%
TCCACTCAAAGGAAAAGTAG+AGG + chr6_1:101283278-101283297 None:intergenic 40.0%
!!! CTTTTGCTCTAGGATTACAG+AGG + chr6_1:101283421-101283440 None:intergenic 40.0%
TCTCTGCCCAAAAACCAATA+AGG - chr6_1:101283463-101283482 Msa0902640:intron 40.0%
ACCATTTGGCAACAACAGTA+GGG + chr6_1:101283514-101283533 None:intergenic 40.0%
!! ATAATCTGTTAGGTATCGGG+TGG + chr6_1:101283719-101283738 None:intergenic 40.0%
!! CTAAAGTGCTGAGTAACTGA+AGG - chr6_1:101283754-101283773 Msa0902640:CDS 40.0%
GGGAAGTTTAGCCTGAGAAT+AGG + chr6_1:101275538-101275557 None:intergenic 45.0%
CTAAACTTCCCTCTGTTCTG+AGG - chr6_1:101275547-101275566 Msa0902640:three_prime_UTR 45.0%
CGATAGATCCTCAGAACAGA+GGG + chr6_1:101275558-101275577 None:intergenic 45.0%
TCGATAGATCCTCAGAACAG+AGG + chr6_1:101275559-101275578 None:intergenic 45.0%
AACTGGAAGCAACTCAGCAA+CGG + chr6_1:101275622-101275641 None:intergenic 45.0%
GATTCCTCTCTGAGTTGTGT+CGG + chr6_1:101276454-101276473 None:intergenic 45.0%
! TTTTCTGTTAGGGCCAGAGT+AGG + chr6_1:101276476-101276495 None:intergenic 45.0%
CCCTATTCTTTGTGTCCTCA+AGG - chr6_1:101277954-101277973 Msa0902640:intron 45.0%
CCCTTGAGGACACAAAGAAT+AGG + chr6_1:101277958-101277977 None:intergenic 45.0%
! CTTTACCTTAAGGGGCATGT+CGG - chr6_1:101278160-101278179 Msa0902640:intron 45.0%
! TTTACCTTAAGGGGCATGTC+GGG - chr6_1:101278161-101278180 Msa0902640:intron 45.0%
! TGATCAATCCCTACCGGTTA+AGG + chr6_1:101278270-101278289 None:intergenic 45.0%
TTAACCGGTAGGGATTGATC+AGG - chr6_1:101278269-101278288 Msa0902640:intron 45.0%
TGTGCGTCTGAATAGCACTA+CGG - chr6_1:101278521-101278540 Msa0902640:CDS 45.0%
TCCACGAATTCTGCAATCAC+AGG - chr6_1:101278852-101278871 Msa0902640:CDS 45.0%
TCCTGTGATTGCAGAATTCG+TGG + chr6_1:101278856-101278875 None:intergenic 45.0%
CAATGGCTATTGCCCAAGAA+AGG - chr6_1:101278985-101279004 Msa0902640:CDS 45.0%
CCAATACATAGAGTCTCCCT+AGG + chr6_1:101279065-101279084 None:intergenic 45.0%
CCTAGGGAGACTCTATGTAT+TGG - chr6_1:101279062-101279081 Msa0902640:intron 45.0%
GATTGCAGGCACATTTAGTG+CGG - chr6_1:101279218-101279237 Msa0902640:CDS 45.0%
ATTGCAGGCACATTTAGTGC+GGG - chr6_1:101279219-101279238 Msa0902640:CDS 45.0%
TCCCAAGAAAGTGAGGTTCA+TGG - chr6_1:101279352-101279371 Msa0902640:intron 45.0%
! CCCTTGGCAACATTCTTTTG+AGG + chr6_1:101279400-101279419 None:intergenic 45.0%
CTGTTCCCTTAAGACTTGAG+TGG - chr6_1:101280034-101280053 Msa0902640:CDS 45.0%
GGCAAACCACTCAAGTCTTA+AGG + chr6_1:101280043-101280062 None:intergenic 45.0%
CTACTACAGCTGAAGTCATG+TGG + chr6_1:101280064-101280083 None:intergenic 45.0%
ACGCAGAAGCTCATGTAAGA+TGG - chr6_1:101280179-101280198 Msa0902640:CDS 45.0%
CGCAGAAGCTCATGTAAGAT+GGG - chr6_1:101280180-101280199 Msa0902640:CDS 45.0%
TGTAAGATGGGCAAAGCTTC+TGG - chr6_1:101280192-101280211 Msa0902640:CDS 45.0%
GTAAGATGGGCAAAGCTTCT+GGG - chr6_1:101280193-101280212 Msa0902640:CDS 45.0%
TAAGATGGGCAAAGCTTCTG+GGG - chr6_1:101280194-101280213 Msa0902640:CDS 45.0%
AACTCCTGCAGTTTCAACCT+AGG + chr6_1:101280238-101280257 None:intergenic 45.0%
AGATTGGGATACAACATCCG+TGG - chr6_1:101280403-101280422 Msa0902640:intron 45.0%
GATTGGGATACAACATCCGT+GGG - chr6_1:101280404-101280423 Msa0902640:intron 45.0%
AATTATGGCAGTGCTTGACC+AGG - chr6_1:101280579-101280598 Msa0902640:intron 45.0%
AGTGCTTGACCAGGAAACAT+GGG - chr6_1:101280588-101280607 Msa0902640:intron 45.0%
CCAGAAGACAATGCATCCAA+TGG + chr6_1:101280664-101280683 None:intergenic 45.0%
CCATTGGATGCATTGTCTTC+TGG - chr6_1:101280661-101280680 Msa0902640:intron 45.0%
TGGCGACTAACAATGATGCT+CGG - chr6_1:101280731-101280750 Msa0902640:intron 45.0%
! TGGTAAACTGGTTGGTCATC+TGG - chr6_1:101280932-101280951 Msa0902640:intron 45.0%
TCACAGCTGAGGGCTAAAAT+GGG + chr6_1:101281447-101281466 None:intergenic 45.0%
CTTGAGCAATATCAAGCCAC+TGG + chr6_1:101281507-101281526 None:intergenic 45.0%
!! CTGAAGATAGTGCTGGCAAA+AGG + chr6_1:101281559-101281578 None:intergenic 45.0%
TTCAGAAGTTGTTCTCCGTG+TGG - chr6_1:101281574-101281593 Msa0902640:intron 45.0%
GTTGAATGTTGGGCAGTGAA+GGG + chr6_1:101281865-101281884 None:intergenic 45.0%
TGTTGAATGTTGGGCAGTGA+AGG + chr6_1:101281866-101281885 None:intergenic 45.0%
TGCCCAACATTCAACACCAT+AGG - chr6_1:101281870-101281889 Msa0902640:intron 45.0%
GCCCAACATTCAACACCATA+GGG - chr6_1:101281871-101281890 Msa0902640:intron 45.0%
! GGAAGCATGGATGAGAAGAT+TGG + chr6_1:101281987-101282006 None:intergenic 45.0%
CATCAAAGAGCTCAGATCCT+TGG + chr6_1:101282043-101282062 None:intergenic 45.0%
AATAGAATGAGTTTGGGGGG+GGG + chr6_1:101282326-101282345 None:intergenic 45.0%
AATAACAGAATGGGGCACGT+GGG + chr6_1:101282389-101282408 None:intergenic 45.0%
AAATAACAGAATGGGGCACG+TGG + chr6_1:101282390-101282409 None:intergenic 45.0%
GGGGGAGAAATAACAGAATG+GGG + chr6_1:101282397-101282416 None:intergenic 45.0%
GGGGGGAGAAATAACAGAAT+GGG + chr6_1:101282398-101282417 None:intergenic 45.0%
TGGGGGGAGAAATAACAGAA+TGG + chr6_1:101282399-101282418 None:intergenic 45.0%
CTTGTGTGCGAATTTGTACC+AGG + chr6_1:101282831-101282850 None:intergenic 45.0%
AGGAAGGCGAAAAAGGGATT+AGG + chr6_1:101283033-101283052 None:intergenic 45.0%
AGATGGAGGAAGGCGAAAAA+GGG + chr6_1:101283039-101283058 None:intergenic 45.0%
CTACTCTATCAGATGGAGGA+AGG + chr6_1:101283049-101283068 None:intergenic 45.0%
TCATTGCAAGGGAGACTACA+TGG + chr6_1:101283245-101283264 None:intergenic 45.0%
GGGATTGGAGAATCATTGCA+AGG + chr6_1:101283257-101283276 None:intergenic 45.0%
!! CCCTCTACTTTTCCTTTGAG+TGG - chr6_1:101283274-101283293 Msa0902640:intron 45.0%
AGAGAGATGTCTCTTCTCTG+AGG + chr6_1:101283446-101283465 None:intergenic 45.0%
TCCCTACTGTTGTTGCCAAA+TGG - chr6_1:101283510-101283529 Msa0902640:intron 45.0%
GACCATTTGGCAACAACAGT+AGG + chr6_1:101283515-101283534 None:intergenic 45.0%
!! GGTATCGGGTGGTATTGATA+GGG + chr6_1:101283708-101283727 None:intergenic 45.0%
!! AGGTATCGGGTGGTATTGAT+AGG + chr6_1:101283709-101283728 None:intergenic 45.0%
!! TATTAAAAAAATAAAAAAAG+TGG - chr6_1:101277549-101277568 Msa0902640:intron 5.0%
!! ATTAAAAAAATAAAAAAAGT+GGG - chr6_1:101277550-101277569 Msa0902640:intron 5.0%
GAAGCTCGAGCAGCAATAAC+TGG + chr6_1:101275639-101275658 None:intergenic 50.0%
TGCTGCTCGAGCTTCAGAAT+CGG - chr6_1:101275644-101275663 Msa0902640:three_prime_UTR 50.0%
! TTCTGGAGACAGAGCTGTAG+AGG - chr6_1:101275674-101275693 Msa0902640:three_prime_UTR 50.0%
TCTGTGCATCTCAGCAATGC+CGG + chr6_1:101276208-101276227 None:intergenic 50.0%
TTGTGTCGGAGCTTTGCTCA+GGG + chr6_1:101276440-101276459 None:intergenic 50.0%
CTCAGAGAGGAATCCTACTC+TGG - chr6_1:101276460-101276479 Msa0902640:CDS 50.0%
ATATCCCGACATGCCCCTTA+AGG + chr6_1:101278168-101278187 None:intergenic 50.0%
! GCCAAGGGTCCATCTTTTCA+CGG - chr6_1:101279412-101279431 Msa0902640:intron 50.0%
TCCGTGAAAAGATGGACCCT+TGG + chr6_1:101279416-101279435 None:intergenic 50.0%
AAGATGGGCAAAGCTTCTGG+GGG - chr6_1:101280195-101280214 Msa0902640:CDS 50.0%
ACCTAGGATGGAGAGTAGCA+CGG + chr6_1:101280222-101280241 None:intergenic 50.0%
CCTGCAGTTTCAACCTAGGA+TGG + chr6_1:101280234-101280253 None:intergenic 50.0%
! CCATCCTAGGTTGAAACTGC+AGG - chr6_1:101280231-101280250 Msa0902640:intron 50.0%
CCTGTGAATGCAGTATCCCA+CGG + chr6_1:101280423-101280442 None:intergenic 50.0%
GATACTGCATTCACAGGCCA+AGG - chr6_1:101280426-101280445 Msa0902640:intron 50.0%
CAGTGCTTGACCAGGAAACA+TGG - chr6_1:101280587-101280606 Msa0902640:intron 50.0%
CTATCTCCACCCATGTTTCC+TGG + chr6_1:101280600-101280619 None:intergenic 50.0%
! TTGTCTTCTGGGGACCCTAA+TGG - chr6_1:101280673-101280692 Msa0902640:intron 50.0%
TAACAATGATGCTCGGCCGA+TGG - chr6_1:101280738-101280757 Msa0902640:intron 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG + chr6_1:101281019-101281038 None:intergenic 50.0%
CTCACAGCTGAGGGCTAAAA+TGG + chr6_1:101281448-101281467 None:intergenic 50.0%
ATAGAATGAGTTTGGGGGGG+GGG + chr6_1:101282325-101282344 None:intergenic 50.0%
ATAACAGAATGGGGCACGTG+GGG + chr6_1:101282388-101282407 None:intergenic 50.0%
!!! CTGCGGTTTTTTTCCAGTGC+AGG + chr6_1:101282536-101282555 None:intergenic 50.0%
CTGCACTGGAAAAAAACCGC+AGG - chr6_1:101282534-101282553 Msa0902640:intron 50.0%
GTCCATCACCTCTAAACACC+TGG - chr6_1:101282764-101282783 Msa0902640:intron 50.0%
CAGATGGAGGAAGGCGAAAA+AGG + chr6_1:101283040-101283059 None:intergenic 50.0%
!! CTCTGAGGAGCTTTTGCTCT+AGG + chr6_1:101283431-101283450 None:intergenic 50.0%
GACAGAGCTGTAGAGGCAGA+TGG - chr6_1:101275681-101275700 Msa0902640:three_prime_UTR 55.0%
GTTGTGTCGGAGCTTTGCTC+AGG + chr6_1:101276441-101276460 None:intergenic 55.0%
AGCTCCGACACAACTCAGAG+AGG - chr6_1:101276447-101276466 Msa0902640:CDS 55.0%
GTTGCTGCAGCAATTGCGCA+TGG - chr6_1:101279310-101279329 Msa0902640:intron 55.0%
! TCCGTGCTACTCTCCATCCT+AGG - chr6_1:101280218-101280237 Msa0902640:intron 55.0%
CCGTGGGATACTGCATTCAC+AGG - chr6_1:101280420-101280439 Msa0902640:intron 55.0%
GCTTGACCAGGAAACATGGG+TGG - chr6_1:101280591-101280610 Msa0902640:intron 55.0%
GACTGTCCAGTGTCTGCCAT+CGG + chr6_1:101280757-101280776 None:intergenic 55.0%
GCTTGGGGCTAAAGCAATGC+AGG - chr6_1:101281640-101281659 Msa0902640:intron 55.0%
CGCCAGGTGTTTAGAGGTGA+TGG + chr6_1:101282769-101282788 None:intergenic 55.0%
AGACATTGATCGAGTCGCGC+AGG - chr6_1:101283001-101283020 Msa0902640:intron 55.0%
GCAGGCACATTTAGTGCGGG+CGG - chr6_1:101279222-101279241 Msa0902640:CDS 60.0%
GGGGGGGTAACAGTATGAGG+GGG + chr6_1:101282309-101282328 None:intergenic 60.0%
GGGGGGGGTAACAGTATGAG+GGG + chr6_1:101282310-101282329 None:intergenic 60.0%
GGGGGGGGGTAACAGTATGA+GGG + chr6_1:101282311-101282330 None:intergenic 60.0%
AATGGGGCACGTGGGGTAAG+GGG + chr6_1:101282381-101282400 None:intergenic 60.0%
GAATGGGGCACGTGGGGTAA+GGG + chr6_1:101282382-101282401 None:intergenic 60.0%
AGAATGGGGCACGTGGGGTA+AGG + chr6_1:101282383-101282402 None:intergenic 60.0%
CACCTCTAAACACCTGGCGC+TGG - chr6_1:101282770-101282789 Msa0902640:intron 60.0%
TGCCAGCGCCAGGTGTTTAG+AGG + chr6_1:101282775-101282794 None:intergenic 60.0%
!! TGACTTGACTTGCCAGCGCC+AGG + chr6_1:101282785-101282804 None:intergenic 60.0%
GGGGGGGGGGTAACAGTATG+AGG + chr6_1:101282312-101282331 None:intergenic 65.0%
GCTCGGCCGATGGCAGACAC+TGG - chr6_1:101280748-101280767 Msa0902640:intron 70.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 101275521 101283927 101275521 ID=Msa0902640;Name=Msa0902640
chr6_1 mRNA 101275521 101283927 101275521 ID=Msa0902640-mRNA-1;Parent=Msa0902640;Name=Msa0902640-mRNA-1;_AED=0.10;_eAED=0.10;_QI=76|1|1|1|1|1|10|729|468
chr6_1 exon 101275521 101276285 101275521 ID=Msa0902640-mRNA-1:exon:17959;Parent=Msa0902640-mRNA-1
chr6_1 exon 101276426 101276505 101276426 ID=Msa0902640-mRNA-1:exon:17958;Parent=Msa0902640-mRNA-1
chr6_1 exon 101276617 101276698 101276617 ID=Msa0902640-mRNA-1:exon:17957;Parent=Msa0902640-mRNA-1
chr6_1 exon 101277787 101277940 101277787 ID=Msa0902640-mRNA-1:exon:17956;Parent=Msa0902640-mRNA-1
chr6_1 exon 101278507 101278877 101278507 ID=Msa0902640-mRNA-1:exon:17955;Parent=Msa0902640-mRNA-1
chr6_1 exon 101278971 101279054 101278971 ID=Msa0902640-mRNA-1:exon:17954;Parent=Msa0902640-mRNA-1
chr6_1 exon 101279142 101279289 101279142 ID=Msa0902640-mRNA-1:exon:17953;Parent=Msa0902640-mRNA-1
chr6_1 exon 101279966 101280222 101279966 ID=Msa0902640-mRNA-1:exon:17952;Parent=Msa0902640-mRNA-1
chr6_1 exon 101283351 101283439 101283351 ID=Msa0902640-mRNA-1:exon:17951;Parent=Msa0902640-mRNA-1
chr6_1 exon 101283746 101283927 101283746 ID=Msa0902640-mRNA-1:exon:17950;Parent=Msa0902640-mRNA-1
chr6_1 five_prime_UTR 101283852 101283927 101283852 ID=Msa0902640-mRNA-1:five_prime_utr;Parent=Msa0902640-mRNA-1
chr6_1 CDS 101283746 101283851 101283746 ID=Msa0902640-mRNA-1:cds;Parent=Msa0902640-mRNA-1
chr6_1 CDS 101283351 101283439 101283351 ID=Msa0902640-mRNA-1:cds;Parent=Msa0902640-mRNA-1
chr6_1 CDS 101279966 101280222 101279966 ID=Msa0902640-mRNA-1:cds;Parent=Msa0902640-mRNA-1
chr6_1 CDS 101279142 101279289 101279142 ID=Msa0902640-mRNA-1:cds;Parent=Msa0902640-mRNA-1
chr6_1 CDS 101278971 101279054 101278971 ID=Msa0902640-mRNA-1:cds;Parent=Msa0902640-mRNA-1
chr6_1 CDS 101278507 101278877 101278507 ID=Msa0902640-mRNA-1:cds;Parent=Msa0902640-mRNA-1
chr6_1 CDS 101277787 101277940 101277787 ID=Msa0902640-mRNA-1:cds;Parent=Msa0902640-mRNA-1
chr6_1 CDS 101276617 101276698 101276617 ID=Msa0902640-mRNA-1:cds;Parent=Msa0902640-mRNA-1
chr6_1 CDS 101276426 101276505 101276426 ID=Msa0902640-mRNA-1:cds;Parent=Msa0902640-mRNA-1
chr6_1 CDS 101276250 101276285 101276250 ID=Msa0902640-mRNA-1:cds;Parent=Msa0902640-mRNA-1
chr6_1 three_prime_UTR 101275521 101276249 101275521 ID=Msa0902640-mRNA-1:three_prime_utr;Parent=Msa0902640-mRNA-1
Gene Sequence

>Msa0902640

ATGAAGAGTGCTATTAAAACTGCCGTTGCTGAGTTGCTTCCAGTTATTGCTGCTCGAGCTTCAGAATCGGAGTTCTTTTCTGGAGACAGAGCTGTAGAGGCAGATGGTGGTGGTGCTTCACTTGCTAGCAAGTTAAAGAGTCTGTCATCTGATTGCTTTGTCCATCTTTTGAGTGCTGTTTTCATGATTGTACAGGCACATTTAGTGCGGGCGGCTGAAGTGAAAAAAGCCATTGAATGGATTTTGAGCAACTGTGATGGTCATTATGCTTCTGATTCAGTTGCTGCAGCAATTGCGCATGGTGCTGCAGCTGCAGAAATATCCCAAGAAAGTGAGGTTCATGGTACCACATTTTTGCCATATTCACCTCAAAAGAATGTTGCCAAGGGTCCATCTTTTCACGGAAAAGCAATAGATGCTGTGAGCTTCTCAAATATGTCAAAAAATTTCAGAGCTGATGTATTGCGAGAAAACGCAGAAGCTCATGTAAGATGGGCAAAGCTTCTGGGGGTCCGTGCTACTCTCCATCCTAGGTTGAAACTGCAGGAGTTTCTAACTGTTTACAACATCACCCATGAGTTCATTACAGCTACAGAAAAAATTGGTGGAAGATTGGGATACAACATCCGTGGGATACTGCATTCACAGGCCAAGGCTTTTATTGATTGTCAGCATGATTCTCGGGTGTCAAAAATTATGGCAGTGCTTGACCAGGAAACATGGGTGGAGATAGATGTTCCTGATGAATTTCAATCCATTATCAATACGCTTTTTCCATTGGATGCATTGTCTTCTGGGGACCCTAATGGTGTTGAAGAAGATAATTCAAACAGTTACCATGATTTGGCGACTAACAATGATGCTCGGCCGATGGCAGACACTGGACAGTCAAATGCTGAACAGAATGTTGAGCAGACTGATTCGACCGATGAATCTAAGAAACCAAATAGAGGTCATAGTAAATCGTTAGAGAGTATCAGCACTGAGAAAGATCAGAAAAAATCTGCATCTCAACCTCTTTTCTACAAAGGTGTTGGTTATCACATGGTAAACTGTGGCTTGATATTGCTCAAGATATTGTTAGAATACATTGATATGAACAACCTTTTGCCAGCACTATCTTCAGAAGTTGTTCTCCGTGTGGTAGAAATCTTGAAGTGTTTCAACACAAGAACATGTCAACTTGTGCTTGGGGCTAAAGCAATGCAGGTGTCTGGTTTGAAGTCCATCACCTCTAAACACCTGGCGCTGGCAAGTCAAGTCATTAGTTTCATACATGCTATTATTCCTGAAATTCGGCAGATTCTTTTTCTGAAAGTTCCAGAGAATAGAAAATTGCTATTGCTTTCAGACATTGATCGAGTCGCGCAGGGGATGAATATTTATGATTTACAATTCCTCATATAA
Protein sequence

>Msa0902640

MKSAIKTAVAELLPVIAARASESEFFSGDRAVEADGGGASLASKLKSLSSDCFVHLLSAVFMIVQAHLVRAAEVKKAIEWILSNCDGHYASDSVAAAIAHGAAAAEISQESEVHGTTFLPYSPQKNVAKGPSFHGKAIDAVSFSNMSKNFRADVLRENAEAHVRWAKLLGVRATLHPRLKLQEFLTVYNITHEFITATEKIGGRLGYNIRGILHSQAKAFIDCQHDSRVSKIMAVLDQETWVEIDVPDEFQSIINTLFPLDALSSGDPNGVEEDNSNSYHDLATNNDARPMADTGQSNAEQNVEQTDSTDESKKPNRGHSKSLESISTEKDQKKSASQPLFYKGVGYHMVNCGLILLKILLEYIDMNNLLPALSSEVVLRVVEILKCFNTRTCQLVLGAKAMQVSGLKSITSKHLALASQVISFIHAIIPEIRQILFLKVPENRKLLLLSDIDRVAQGMNIYDLQFLI*