AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0902670

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0902670 MtrunA17_Chr2g0303321 93.316 374 9 3 3 360 371 744 0.0 703
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0902670 AT4G19490.1 53.488 387 147 6 3 360 392 774 1.24e-114 357
Msa0902670 AT4G19490.2 53.488 387 147 6 3 360 392 774 1.24e-114 357

Find 121 sgRNAs with CRISPR-Local

Find 605 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATTGGATGCATTGTCTTC+TGG 0.094351 6_1:+101370281 Msa0902670:CDS
ATTTCAATATATAGTTATTT+AGG 0.207794 6_1:-101373273 None:intergenic
TTACATAGCAGTGTATTAAT+TGG 0.213788 6_1:+101372819 Msa0902670:three_prime_UTR
TGTAAGATGGGCAAAGCTTC+TGG 0.226028 6_1:+101369812 Msa0902670:CDS
GATTTACTATGACCTCTATT+TGG 0.232799 6_1:-101370449 None:intergenic
GATTTACAATTCCTCATATA+AGG 0.242498 6_1:+101372789 Msa0902670:three_prime_UTR
CATTGGATGCATTGTCTTCT+GGG 0.257495 6_1:+101370282 Msa0902670:CDS
TTATCTTCTTCAACACCATT+AGG 0.265383 6_1:-101370308 None:intergenic
TATTCAGTTAGGAACCTTAT+TGG 0.270945 6_1:-101373089 None:intergenic
TACCATGAACCTCACTTTCT+TGG 0.288818 6_1:-101368973 None:intergenic
TTCAAACAGTTACCATGATT+TGG 0.290772 6_1:+101370331 Msa0902670:CDS
AGGTATCGGGTGGTATTGAT+AGG 0.304808 6_1:-101373318 None:intergenic
TGACAAAATGTGATAGAAAA+TGG 0.307825 6_1:+101373392 Msa0902670:three_prime_UTR
CTAAATTGTGTTCAGGTGTC+TGG 0.311583 6_1:+101372346 Msa0902670:intron
TTCATACATGCTATTATTCC+TGG 0.325788 6_1:+101372421 Msa0902670:three_prime_UTR
ATGCAATATTTGTATTCATT+AGG 0.341909 6_1:-101373228 None:intergenic
ACAAACTCAAATAATCTGTT+AGG 0.364563 6_1:-101373338 None:intergenic
TTTATATAAATAAGACCATT+TGG 0.366027 6_1:-101373137 None:intergenic
CTATCTCCACCCATGTTTCC+TGG 0.367597 6_1:-101370217 None:intergenic
TGCAGTAATTTGTATTGATT+AGG 0.370535 6_1:-101373188 None:intergenic
TGCCAGCGCCAGGTGTTTAG+AGG 0.373233 6_1:-101372383 None:intergenic
GGTCTTATTTATATAAACTA+AGG 0.375175 6_1:+101373143 Msa0902670:three_prime_UTR
CATTTCTGGTGTAAGAAATT+CGG 0.375373 6_1:+101372539 Msa0902670:intron
TATCTTCTTCAACACCATTA+GGG 0.375458 6_1:-101370307 None:intergenic
GAAGCTCGAGCAGCAATAAC+TGG 0.375937 6_1:-101365253 None:intergenic
CTAACAGATTGGTGGAAGAT+TGG 0.380927 6_1:+101370007 Msa0902670:intron
TTGTCTTCTGGGGACCCTAA+TGG 0.382958 6_1:+101370293 Msa0902670:CDS
GAACATGTCAACTTGTGCTT+GGG 0.388495 6_1:+101371234 Msa0902670:three_prime_UTR
ACCATGAACCTCACTTTCTT+GGG 0.391003 6_1:-101368972 None:intergenic
TATTGATTAGGAGTGGTTAC+AGG 0.397265 6_1:-101373176 None:intergenic
AAATTAATAGATATTATGTT+AGG 0.398692 6_1:+101372938 Msa0902670:three_prime_UTR
AGATTGAGAATTATTCAGTT+AGG 0.422188 6_1:-101373100 None:intergenic
GTAAGATGGGCAAAGCTTCT+GGG 0.422472 6_1:+101369813 Msa0902670:CDS
TAACAGATTGGTGGAAGATT+GGG 0.423692 6_1:+101370008 Msa0902670:intron
TTGATTGTCAGCATGATTCT+CGG 0.424026 6_1:+101370075 Msa0902670:CDS
TCAAATAATCTGTTAGGTAT+CGG 0.424668 6_1:-101373332 None:intergenic
CCAACACCTTTGTAGAAAAG+AGG 0.433653 6_1:-101370521 None:intergenic
AGAAATATTGTAATAGAGGA+AGG 0.440446 6_1:+101372912 Msa0902670:three_prime_UTR
TCCGTGAAAAGATGGACCCT+TGG 0.445255 6_1:-101369032 None:intergenic
CAAATAATCTGTTAGGTATC+GGG 0.453542 6_1:-101373331 None:intergenic
CGCCAGGTGTTTAGAGGTGA+TGG 0.456248 6_1:-101372377 None:intergenic
ATAATGGATTGAAATTCATC+AGG 0.457894 6_1:-101370245 None:intergenic
GTTGCTCAAAATCCATTCAA+TGG 0.459861 6_1:-101368879 None:intergenic
TGTATTCATTAGGAGCAGTT+AGG 0.461706 6_1:-101373218 None:intergenic
ATTTGGTTTCTTAGATTCAT+CGG 0.461938 6_1:-101370432 None:intergenic
CAAAGGAAAAGTAGAGGGAT+TGG 0.466005 6_1:-101372880 None:intergenic
CTGTAGCTGTAATGAACTCA+TGG 0.467812 6_1:-101369899 None:intergenic
TGATTGTCAGCATGATTCTC+GGG 0.478005 6_1:+101370076 Msa0902670:CDS
ACGCAGAAGCTCATGTAAGA+TGG 0.479024 6_1:+101369799 Msa0902670:CDS
TGACTTGACTTGCCAGCGCC+AGG 0.481429 6_1:-101372393 None:intergenic
TCCCAAGAAAGTGAGGTTCA+TGG 0.483565 6_1:+101368971 Msa0902670:CDS
TCCCTACTGTTGTTGCCAAA+TGG 0.486129 6_1:+101373122 Msa0902670:three_prime_UTR
CATTGTTAGTCGCCAAATCA+TGG 0.493682 6_1:-101370343 None:intergenic
CGCAGAAGCTCATGTAAGAT+GGG 0.498479 6_1:+101369800 Msa0902670:CDS
CCATCCTAGGTTGAAACTGC+AGG 0.501496 6_1:+101369851 Msa0902670:CDS
AGAACATGTCAACTTGTGCT+TGG 0.502388 6_1:+101371233 Msa0902670:three_prime_UTR
TGAAAACAGCACTCAAAAGA+TGG 0.505515 6_1:-101365681 None:intergenic
TGCTGCTCGAGCTTCAGAAT+CGG 0.505667 6_1:+101365261 Msa0902670:CDS
GACTGTCCAGTGTCTGCCAT+CGG 0.509078 6_1:-101370374 None:intergenic
CTGAAGATAGTGCTGGCAAA+AGG 0.511487 6_1:-101371166 None:intergenic
CTGACAATCAATAAAAGCCT+TGG 0.511746 6_1:-101370063 None:intergenic
TTCTGGAGACAGAGCTGTAG+AGG 0.513880 6_1:+101365291 Msa0902670:CDS
AAATATTGTAATAGAGGAAG+GGG 0.521907 6_1:+101372914 Msa0902670:three_prime_UTR
CCACTCAAAGGAAAAGTAGA+GGG 0.522711 6_1:-101372885 None:intergenic
CACCTCTAAACACCTGGCGC+TGG 0.532318 6_1:+101372381 Msa0902670:three_prime_UTR
GCTCGGCCGATGGCAGACAC+TGG 0.534162 6_1:+101370368 Msa0902670:CDS
CCTGCAGTTTCAACCTAGGA+TGG 0.534902 6_1:-101369851 None:intergenic
GAATCTAAGAAACCAAATAG+AGG 0.536720 6_1:+101370437 Msa0902670:CDS
GTCTTATTTATATAAACTAA+GGG 0.546964 6_1:+101373144 Msa0902670:three_prime_UTR
GAAATATTGTAATAGAGGAA+GGG 0.548667 6_1:+101372913 Msa0902670:three_prime_UTR
TCATTGCAAGGGAGACTACA+TGG 0.548928 6_1:-101372853 None:intergenic
CAGTGCTTGACCAGGAAACA+TGG 0.550225 6_1:+101370207 Msa0902670:CDS
ACCTCAAAAGAATGTTGCCA+AGG 0.555014 6_1:+101369015 Msa0902670:CDS
ATTGCAGGCACATTTAGTGC+GGG 0.556696 6_1:+101368838 Msa0902670:intron
GACCATTTGGCAACAACAGT+AGG 0.560981 6_1:-101373124 None:intergenic
GCTTGGGGCTAAAGCAATGC+AGG 0.562696 6_1:+101371250 Msa0902670:three_prime_UTR
TCCACTCAAAGGAAAAGTAG+AGG 0.563123 6_1:-101372886 None:intergenic
TCCGTGCTACTCTCCATCCT+AGG 0.564248 6_1:+101369838 Msa0902670:CDS
CCAGAAGACAATGCATCCAA+TGG 0.565992 6_1:-101370281 None:intergenic
ATTGGATGCATTGTCTTCTG+GGG 0.566027 6_1:+101370283 Msa0902670:CDS
GTTGCTGCAGCAATTGCGCA+TGG 0.566203 6_1:+101368929 Msa0902670:CDS
AATTAAAACTAACAGATTGG+TGG 0.567362 6_1:+101369999 Msa0902670:intron
ACCATTTGGCAACAACAGTA+GGG 0.567455 6_1:-101373123 None:intergenic
TAACAATGATGCTCGGCCGA+TGG 0.569587 6_1:+101370358 Msa0902670:CDS
AGACATTGATCGAGTCGCGC+AGG 0.571184 6_1:+101372612 Msa0902670:three_prime_UTR
CTAAAGTGCTGAGTAACTGA+AGG 0.576601 6_1:+101373366 Msa0902670:three_prime_UTR
TAAGATGGGCAAAGCTTCTG+GGG 0.577135 6_1:+101369814 Msa0902670:CDS
ACAACTTCTGAAGATAGTGC+TGG 0.578492 6_1:-101371173 None:intergenic
AATTATGGCAGTGCTTGACC+AGG 0.579081 6_1:+101370199 Msa0902670:CDS
GGTATCGGGTGGTATTGATA+GGG 0.579270 6_1:-101373317 None:intergenic
GTCCATCACCTCTAAACACC+TGG 0.580720 6_1:+101372375 Msa0902670:three_prime_UTR
CGATAGATCCTCAGAACAGA+GGG 0.581171 6_1:-101365172 None:intergenic
GCAGGCACATTTAGTGCGGG+CGG 0.584583 6_1:+101368841 Msa0902670:intron
GACAGAGCTGTAGAGGCAGA+TGG 0.588172 6_1:+101365298 Msa0902670:CDS
CTAAACTTCCCTCTGTTCTG+AGG 0.589450 6_1:+101365164 Msa0902670:CDS
TAATTTGTATTGATTAGGAG+TGG 0.592339 6_1:-101373183 None:intergenic
CCGTGGGATACTGCATTCAC+AGG 0.596765 6_1:+101370040 Msa0902670:CDS
CAAAGGTGTTGGTTATCACA+TGG 0.608161 6_1:+101370532 Msa0902670:CDS
GATACTGCATTCACAGGCCA+AGG 0.608690 6_1:+101370046 Msa0902670:CDS
GGGATTGGAGAATCATTGCA+AGG 0.608732 6_1:-101372865 None:intergenic
AACTGGAAGCAACTCAGCAA+CGG 0.610286 6_1:-101365236 None:intergenic
GATTGCAGGCACATTTAGTG+CGG 0.612804 6_1:+101368837 Msa0902670:intron
AACTCCTGCAGTTTCAACCT+AGG 0.615419 6_1:-101369855 None:intergenic
AGAAATATCCCAAGAAAGTG+AGG 0.616680 6_1:+101368964 Msa0902670:CDS
AGATTGGGATACAACATCCG+TGG 0.627179 6_1:+101370023 Msa0902670:CDS
CCTCAAAAGAATGTTGCCAA+GGG 0.627962 6_1:+101369016 Msa0902670:CDS
GGATTGGAGAATCATTGCAA+GGG 0.631385 6_1:-101372864 None:intergenic
TTCAGAAGTTGTTCTCCGTG+TGG 0.635037 6_1:+101371184 Msa0902670:three_prime_UTR
AGAGAGATGTCTCTTCTCTG+AGG 0.638428 6_1:-101373055 None:intergenic
AACATGTCAACTTGTGCTTG+GGG 0.638733 6_1:+101371235 Msa0902670:three_prime_UTR
ACCTAGGATGGAGAGTAGCA+CGG 0.649176 6_1:-101369839 None:intergenic
TGGCGACTAACAATGATGCT+CGG 0.651360 6_1:+101370351 Msa0902670:CDS
GATTGGGATACAACATCCGT+GGG 0.664663 6_1:+101370024 Msa0902670:CDS
GCTTGACCAGGAAACATGGG+TGG 0.669451 6_1:+101370211 Msa0902670:CDS
ACTTCAAGATTTCTACCACA+CGG 0.672850 6_1:-101371199 None:intergenic
ATAATCTGTTAGGTATCGGG+TGG 0.673521 6_1:-101373328 None:intergenic
TCGATAGATCCTCAGAACAG+AGG 0.676616 6_1:-101365173 None:intergenic
TGTAGCTGTAATGAACTCAT+GGG 0.683392 6_1:-101369898 None:intergenic
AGTGCTTGACCAGGAAACAT+GGG 0.683888 6_1:+101370208 Msa0902670:CDS
CCTGTGAATGCAGTATCCCA+CGG 0.692228 6_1:-101370040 None:intergenic
AAGATGGGCAAAGCTTCTGG+GGG 0.726966 6_1:+101369815 Msa0902670:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAAATTAAATCTTATATAT+GGG + chr6_1:101365360-101365379 Msa0902670:intron 10.0%
!! TATAAAACAAAATTTATTGT+TGG - chr6_1:101366978-101366997 None:intergenic 10.0%
!! CAAAATAAAAAAAAAAAAGT+GGG + chr6_1:101367230-101367249 Msa0902670:intron 10.0%
!! AAATAATATATAAAACACAA+CGG - chr6_1:101370123-101370142 None:intergenic 10.0%
!!! AAATAGTTTTTATATCTAAA+AGG - chr6_1:101371308-101371327 None:intergenic 10.0%
!! TTATTTAAAAAAAAACGAAA+TGG - chr6_1:101371618-101371637 None:intergenic 10.0%
!! AAATTAATAGATATTATGTT+AGG + chr6_1:101372938-101372957 Msa0902670:three_prime_UTR 10.0%
!! ATTTCAATATATAGTTATTT+AGG - chr6_1:101373276-101373295 None:intergenic 10.0%
!!! TAGTTCATCAATTATTTTTA+TGG - chr6_1:101364317-101364336 None:intergenic 15.0%
!! CAGAAATTAAATCTTATATA+TGG + chr6_1:101365359-101365378 Msa0902670:intron 15.0%
!!! TTTATTGATAGTAATGAAAA+TGG + chr6_1:101365997-101366016 Msa0902670:intron 15.0%
!! TTAAAAAACAAAGAATGAAA+TGG - chr6_1:101366441-101366460 None:intergenic 15.0%
!!! ATTCTTTGTTTTTTAAGTTA+CGG + chr6_1:101366445-101366464 Msa0902670:intron 15.0%
!! ATATAATTTGATATGTGATT+CGG - chr6_1:101366901-101366920 None:intergenic 15.0%
!!! CCACTTTTTTTTTTTTATTT+TGG - chr6_1:101367232-101367251 None:intergenic 15.0%
!! CCAAAATAAAAAAAAAAAAG+TGG + chr6_1:101367229-101367248 Msa0902670:intron 15.0%
!!! TTAATACTACTAAATGTTTT+GGG - chr6_1:101367343-101367362 None:intergenic 15.0%
!!! ATTAATACTACTAAATGTTT+TGG - chr6_1:101367344-101367363 None:intergenic 15.0%
!!! AGTTTATTTTCAATTACTAT+TGG + chr6_1:101367528-101367547 Msa0902670:intron 15.0%
!! GGAATAAAAAATAACTAAAA+AGG - chr6_1:101367868-101367887 None:intergenic 15.0%
!! TCTAAGTATTATAAAAGTTA+AGG - chr6_1:101368405-101368424 None:intergenic 15.0%
!!! AAAAATTTCAGGTTAAATAT+AGG + chr6_1:101369091-101369110 Msa0902670:intron 15.0%
!!! AAAAGTACATATTTTCATTT+TGG + chr6_1:101369923-101369942 Msa0902670:intron 15.0%
!! AGTTTAAATTTCAAATTATG+TGG + chr6_1:101369951-101369970 Msa0902670:intron 15.0%
!!! AACTGAAAAATAACAATTTT+GGG - chr6_1:101370866-101370885 None:intergenic 15.0%
!!! AAACTGAAAAATAACAATTT+TGG - chr6_1:101370867-101370886 None:intergenic 15.0%
!! AAAGTTGAAAATAATAACTT+TGG - chr6_1:101370952-101370971 None:intergenic 15.0%
!!! AAAGTTATTATTTTCAACTT+TGG + chr6_1:101370951-101370970 Msa0902670:intron 15.0%
!!! AAGTTATTATTTTCAACTTT+GGG + chr6_1:101370952-101370971 Msa0902670:intron 15.0%
!! AAGAGAAAAATTTATTGTAT+TGG - chr6_1:101371448-101371467 None:intergenic 15.0%
!!! ATATTAGGTTTTTATCAAAT+TGG - chr6_1:101371676-101371695 None:intergenic 15.0%
!! ATTTCAGATATGAATATATT+AGG - chr6_1:101371691-101371710 None:intergenic 15.0%
!!! ATATCTGAAATAGAAAATAA+TGG + chr6_1:101371700-101371719 Msa0902670:intron 15.0%
!! AAAAAGAAATATTGTAATAG+AGG + chr6_1:101372908-101372927 Msa0902670:three_prime_UTR 15.0%
!! TTTATATAAATAAGACCATT+TGG - chr6_1:101373140-101373159 None:intergenic 15.0%
!!! GTCTTATTTATATAAACTAA+GGG + chr6_1:101373144-101373163 Msa0902670:three_prime_UTR 15.0%
!!! AATTATATCTTTTAACAACA+TGG + chr6_1:101373510-101373529 Msa0902670:three_prime_UTR 15.0%
!!! ATTATATCTTTTAACAACAT+GGG + chr6_1:101373511-101373530 Msa0902670:three_prime_UTR 15.0%
!!! GTTATTCTTTTGTATTTTTG+AGG + chr6_1:101364184-101364203 Msa0902670:intron 20.0%
!!! TAATAAGATGAAAGTATAGA+TGG - chr6_1:101364581-101364600 None:intergenic 20.0%
!! AGTTAAACTTAAATCTTCAT+GGG - chr6_1:101364846-101364865 None:intergenic 20.0%
!! AAGTTAAACTTAAATCTTCA+TGG - chr6_1:101364847-101364866 None:intergenic 20.0%
!! AAAATAAACTGAAAAGCTTT+AGG - chr6_1:101364976-101364995 None:intergenic 20.0%
!! ATAGCATAACTATTGATATT+TGG + chr6_1:101365332-101365351 Msa0902670:intron 20.0%
!! ATTAAATCTTATATATGGGT+TGG + chr6_1:101365364-101365383 Msa0902670:intron 20.0%
!! TTAAATCTTATATATGGGTT+GGG + chr6_1:101365365-101365384 Msa0902670:intron 20.0%
!! ACATCTCATAAAATGTAAAT+AGG + chr6_1:101365513-101365532 Msa0902670:intron 20.0%
!!! TGTTTTCTACCAATTTAAAT+AGG + chr6_1:101365970-101365989 Msa0902670:intron 20.0%
!!! GTTTTCTACCAATTTAAATA+GGG + chr6_1:101365971-101365990 Msa0902670:intron 20.0%
!! ATTCTATTATTTAACCCTAA+TGG + chr6_1:101366172-101366191 Msa0902670:intron 20.0%
!! TTCTATTATTTAACCCTAAT+GGG + chr6_1:101366173-101366192 Msa0902670:intron 20.0%
!! CATTAGGATTAAATAATAAG+AGG - chr6_1:101366199-101366218 None:intergenic 20.0%
!! CTCTTATTATTTAATCCTAA+TGG + chr6_1:101366197-101366216 Msa0902670:intron 20.0%
!!! TTAAGTTGATTATTAGTAAG+TGG - chr6_1:101366224-101366243 None:intergenic 20.0%
!! AAATTAGTAGGTGATTAATT+AGG - chr6_1:101366248-101366267 None:intergenic 20.0%
!!! AGATGTTTTAAGAAATTAGT+AGG - chr6_1:101366260-101366279 None:intergenic 20.0%
!!! ATTTTTTATGCAACTTTACT+CGG - chr6_1:101366349-101366368 None:intergenic 20.0%
!! TTCCCTAATTATGAATAATA+CGG - chr6_1:101366602-101366621 None:intergenic 20.0%
!! TATATATATATTGAGAGATG+AGG - chr6_1:101367070-101367089 None:intergenic 20.0%
!! ATATATGTGAAAATTGCAAA+AGG - chr6_1:101367149-101367168 None:intergenic 20.0%
!!! CATAAACAAAATGGTATTTT+AGG - chr6_1:101367293-101367312 None:intergenic 20.0%
!!! CTAAAATACCATTTTGTTTA+TGG + chr6_1:101367291-101367310 Msa0902670:intron 20.0%
!! ATGTATCTAGTAATTTGAAA+TGG + chr6_1:101367390-101367409 Msa0902670:intron 20.0%
!!! TGTATCTAGTAATTTGAAAT+GGG + chr6_1:101367391-101367410 Msa0902670:intron 20.0%
!!! TTTTTTTTGTCTGGAAAAAA+AGG + chr6_1:101367436-101367455 Msa0902670:intron 20.0%
!!! GTTATTTTTTATTCCTTAAC+CGG + chr6_1:101367873-101367892 Msa0902670:intron 20.0%
!!! TATTGTATTTTCTTGTATCA+AGG - chr6_1:101367949-101367968 None:intergenic 20.0%
!! ATTAAAACCAATCTAACATA+TGG - chr6_1:101368509-101368528 None:intergenic 20.0%
!! TATATTTCATGTACAAGAAT+AGG + chr6_1:101368705-101368724 Msa0902670:intron 20.0%
!! CAAATATGTCAAAAAATTTC+AGG + chr6_1:101369080-101369099 Msa0902670:intron 20.0%
!! CAATTAAAACACAAAAGTAA+TGG - chr6_1:101369714-101369733 None:intergenic 20.0%
!! TTGAGAACATGAAATAAATT+GGG - chr6_1:101369740-101369759 None:intergenic 20.0%
!! TTTGAGAACATGAAATAAAT+TGG - chr6_1:101369741-101369760 None:intergenic 20.0%
!!! CAATCTGTTAGTTTTAATTT+GGG - chr6_1:101369998-101370017 None:intergenic 20.0%
!!! ACTGAAAAATAACAATTTTG+GGG - chr6_1:101370865-101370884 None:intergenic 20.0%
!! AAATTAACCGTATTAACTAT+TGG - chr6_1:101370998-101371017 None:intergenic 20.0%
!!! ATAAGTTAGAATCAATTTTC+AGG + chr6_1:101371546-101371565 Msa0902670:intron 20.0%
!!! TAAGTTAGAATCAATTTTCA+GGG + chr6_1:101371547-101371566 Msa0902670:intron 20.0%
!!! TGGTTTTATTGGAAATATTT+TGG - chr6_1:101371836-101371855 None:intergenic 20.0%
!!! TATGAAAATATTTTGGGTAA+CGG - chr6_1:101371896-101371915 None:intergenic 20.0%
!!! TGTTATAATAGAATGAGTTT+TGG - chr6_1:101371943-101371962 None:intergenic 20.0%
!! AACTCTAAGTTAATTGAAAT+GGG - chr6_1:101372298-101372317 None:intergenic 20.0%
!! AAACTCTAAGTTAATTGAAA+TGG - chr6_1:101372299-101372318 None:intergenic 20.0%
!!! ATTTTTTCTAAATTGTGTTC+AGG + chr6_1:101372339-101372358 Msa0902670:intron 20.0%
!!! TTTATGAAATTGTTGTTACA+CGG + chr6_1:101372490-101372509 Msa0902670:intron 20.0%
!!! TCTTTTGTTTCTCTTTAATT+CGG - chr6_1:101372967-101372986 None:intergenic 20.0%
!!! GGTCTTATTTATATAAACTA+AGG + chr6_1:101373143-101373162 Msa0902670:three_prime_UTR 20.0%
!! ATGCAATATTTGTATTCATT+AGG - chr6_1:101373231-101373250 None:intergenic 20.0%
! AAATCACTATGAAGGATAAA+AGG - chr6_1:101364220-101364239 None:intergenic 25.0%
!!! AAGTTATTTTATGTGGAGTT+GGG + chr6_1:101364492-101364511 Msa0902670:intron 25.0%
! ACAATTACAGTCCATTAATT+AGG + chr6_1:101364529-101364548 Msa0902670:intron 25.0%
! TGTAAGGGATATAAATGAAT+TGG + chr6_1:101364699-101364718 Msa0902670:intron 25.0%
! ATCCTAAATTACGAATGTTA+GGG - chr6_1:101364900-101364919 None:intergenic 25.0%
! TATCCTAAATTACGAATGTT+AGG - chr6_1:101364901-101364920 None:intergenic 25.0%
!! TTAAGATTTCACATGTTTTG+TGG + chr6_1:101364921-101364940 Msa0902670:intron 25.0%
!! TAAGATTTCACATGTTTTGT+GGG + chr6_1:101364922-101364941 Msa0902670:intron 25.0%
! GAATCGTAAACATATCTTAT+AGG - chr6_1:101364954-101364973 None:intergenic 25.0%
!!! TTTAGCTTGTTTTGGTTTTA+TGG + chr6_1:101365125-101365144 Msa0902670:intron 25.0%
!! TAAATCTTATATATGGGTTG+GGG + chr6_1:101365366-101365385 Msa0902670:intron 25.0%
!! ACTCAAACATAATTTTTGTG+TGG + chr6_1:101365421-101365440 Msa0902670:intron 25.0%
! AACAAATTGTTACTGTTCAA+TGG - chr6_1:101365475-101365494 None:intergenic 25.0%
!!! GAAAAGTGCTTATAAAAGAA+AGG - chr6_1:101365571-101365590 None:intergenic 25.0%
! TACAAGAATTATAGTCTAGA+TGG - chr6_1:101365745-101365764 None:intergenic 25.0%
!! ATAAAGCACCCTATTTAAAT+TGG - chr6_1:101365982-101366001 None:intergenic 25.0%
!! ACAGAATAAGTTTTCTGTTA+GGG - chr6_1:101366103-101366122 None:intergenic 25.0%
! TCCCGTATTATTCATAATTA+GGG + chr6_1:101366597-101366616 Msa0902670:intron 25.0%
! TCCCTAATTATGAATAATAC+GGG - chr6_1:101366601-101366620 None:intergenic 25.0%
! ATAATTAGGGAACATTACTT+AGG + chr6_1:101366610-101366629 Msa0902670:intron 25.0%
! TTTACAATATCTCAACACTT+GGG - chr6_1:101366721-101366740 None:intergenic 25.0%
!! TTTTACAATATCTCAACACT+TGG - chr6_1:101366722-101366741 None:intergenic 25.0%
! GAGATATTGTAAAATAGTCT+TGG + chr6_1:101366728-101366747 Msa0902670:intron 25.0%
! CAATAGGATAATATCTAAAC+TGG - chr6_1:101366756-101366775 None:intergenic 25.0%
! ATATTATCCTATTGTATTCC+TGG + chr6_1:101366762-101366781 Msa0902670:intron 25.0%
! TATTATCCTATTGTATTCCT+GGG + chr6_1:101366763-101366782 Msa0902670:intron 25.0%
! AGGTAAGATAATCAACTAAA+AGG - chr6_1:101366806-101366825 None:intergenic 25.0%
!! GTATCTAGTAATTTGAAATG+GGG + chr6_1:101367392-101367411 Msa0902670:intron 25.0%
! TGAAATGGGGATTATATTTA+CGG + chr6_1:101367405-101367424 Msa0902670:intron 25.0%
!!! GACACTTTTTTTTTTTTGTC+TGG + chr6_1:101367427-101367446 Msa0902670:intron 25.0%
! AAAAAAAGGAGCTTATATTG+AGG + chr6_1:101367450-101367469 Msa0902670:intron 25.0%
!! ACTGTATTTTCATGTATCAA+TGG - chr6_1:101367511-101367530 None:intergenic 25.0%
! TCAAAATGATATCTATAGCA+AGG - chr6_1:101367637-101367656 None:intergenic 25.0%
! ATGTATATGCTTTACCTTAA+GGG + chr6_1:101367770-101367789 Msa0902670:intron 25.0%
! AATAACTAAAAAGGACACTT+GGG - chr6_1:101367859-101367878 None:intergenic 25.0%
! AAATAACTAAAAAGGACACT+TGG - chr6_1:101367860-101367879 None:intergenic 25.0%
!! TATTTTCTTGTATCAAGGAA+AGG - chr6_1:101367944-101367963 None:intergenic 25.0%
! CTACGGAAGATTTATTATAT+AGG + chr6_1:101368157-101368176 Msa0902670:intron 25.0%
!! ACCTAAAGACATTTTATTCA+TGG + chr6_1:101368433-101368452 Msa0902670:intron 25.0%
!! AACTTTTCCATATGTTAGAT+TGG + chr6_1:101368499-101368518 Msa0902670:intron 25.0%
! CATTAAACCTTCATTATCAA+TGG + chr6_1:101368587-101368606 Msa0902670:intron 25.0%
!!! TTACATGTTTTTTCTTCCTA+GGG + chr6_1:101368665-101368684 Msa0902670:intron 25.0%
! AAAGGTAAATTTCAGTAACA+TGG - chr6_1:101368753-101368772 None:intergenic 25.0%
!!! TTTTTCTTTTTAGTGATTGC+AGG + chr6_1:101368823-101368842 Msa0902670:intron 25.0%
! TTGTTCTAATACACTTGTAA+TGG + chr6_1:101369118-101369137 Msa0902670:intron 25.0%
! AAGCATGTAATTTATGATGT+AGG + chr6_1:101369178-101369197 Msa0902670:intron 25.0%
! TATACTCCATTAGATAGTTT+AGG - chr6_1:101369229-101369248 None:intergenic 25.0%
! ACTGTTGATACTTTATTGAA+TGG + chr6_1:101369355-101369374 Msa0902670:intron 25.0%
! CAAATGTAATATATTGAACG+AGG + chr6_1:101369381-101369400 Msa0902670:intron 25.0%
! TACGAATAAGGATTCTATAA+AGG - chr6_1:101369413-101369432 None:intergenic 25.0%
! TTTATAGAATCCTTATTCGT+AGG + chr6_1:101369412-101369431 Msa0902670:intron 25.0%
! TTGACATATAAATAGTGTTC+TGG - chr6_1:101369453-101369472 None:intergenic 25.0%
!!! GTTTTACACTAAAAGCATTA+TGG + chr6_1:101369523-101369542 Msa0902670:intron 25.0%
! TTTCATGTTCTCAAAAAATC+TGG + chr6_1:101369746-101369765 Msa0902670:intron 25.0%
!!! CCAATCTGTTAGTTTTAATT+TGG - chr6_1:101369999-101370018 None:intergenic 25.0%
! CCAAATTAAAACTAACAGAT+TGG + chr6_1:101369996-101370015 Msa0902670:intron 25.0%
! AATTAAAACTAACAGATTGG+TGG + chr6_1:101369999-101370018 Msa0902670:intron 25.0%
! CATTTAGGTGTCAAAAATTA+TGG + chr6_1:101370184-101370203 Msa0902670:intron 25.0%
!!! ATAATGGATTGAAATTCATC+AGG - chr6_1:101370248-101370267 None:intergenic 25.0%
!! ATTTGGTTTCTTAGATTCAT+CGG - chr6_1:101370435-101370454 None:intergenic 25.0%
! AATAGTAGTTGCATACAATA+GGG - chr6_1:101370602-101370621 None:intergenic 25.0%
! AACAATTATTATGGAACAGA+AGG - chr6_1:101370820-101370839 None:intergenic 25.0%
! CGCAAATGTAACAATTATTA+TGG - chr6_1:101370829-101370848 None:intergenic 25.0%
!! CTGAAAAATAACAATTTTGG+GGG - chr6_1:101370864-101370883 None:intergenic 25.0%
! GAATCAACCAATAGTTAATA+CGG + chr6_1:101370988-101371007 Msa0902670:intron 25.0%
!! TGTATTGTTCTCTGAATTTT+TGG + chr6_1:101371280-101371299 Msa0902670:intron 25.0%
! TGATTTCTGCAAAAGAATTT+AGG + chr6_1:101371366-101371385 Msa0902670:intron 25.0%
!! AAGTTAGAATCAATTTTCAG+GGG + chr6_1:101371548-101371567 Msa0902670:intron 25.0%
! AATAAATATTAGAAGCTCCA+AGG + chr6_1:101371633-101371652 Msa0902670:intron 25.0%
!!! TGGTAATAGAATGGTTTTAT+TGG - chr6_1:101371847-101371866 None:intergenic 25.0%
!!! CTTTTTTCTTGGTAATAGAA+TGG - chr6_1:101371856-101371875 None:intergenic 25.0%
! TTACCAAGAAAAAAGATGAT+AGG + chr6_1:101371861-101371880 Msa0902670:intron 25.0%
!!! ATAATAGAATGAGTTTTGGA+GGG - chr6_1:101371939-101371958 None:intergenic 25.0%
!!! TATAATAGAATGAGTTTTGG+AGG - chr6_1:101371940-101371959 None:intergenic 25.0%
! ACATTAGTTGAAATCTGATA+GGG - chr6_1:101372063-101372082 None:intergenic 25.0%
! ATGCTGAGTTAAAAAATTCA+CGG + chr6_1:101372171-101372190 Msa0902670:intron 25.0%
!!! TTAGAGTTTTGTCATTCTTT+TGG + chr6_1:101372310-101372329 Msa0902670:intron 25.0%
! ATAACTTTGTTCTTCATTTC+TGG + chr6_1:101372525-101372544 Msa0902670:intron 25.0%
!! AATAGCAATTTTCTATTCTC+TGG - chr6_1:101372586-101372605 None:intergenic 25.0%
!! TTTTCAATGAATATCTTTGC+TGG + chr6_1:101372713-101372732 Msa0902670:intron 25.0%
! GATTTACAATTCCTCATATA+AGG + chr6_1:101372789-101372808 Msa0902670:three_prime_UTR 25.0%
!! GTAAATTTTCACCTTATATG+AGG - chr6_1:101372803-101372822 None:intergenic 25.0%
! TTACATAGCAGTGTATTAAT+TGG + chr6_1:101372819-101372838 Msa0902670:three_prime_UTR 25.0%
!! ATATTTCTTTTTCCACTCAA+AGG - chr6_1:101372900-101372919 None:intergenic 25.0%
! AGAAATATTGTAATAGAGGA+AGG + chr6_1:101372912-101372931 Msa0902670:three_prime_UTR 25.0%
! GAAATATTGTAATAGAGGAA+GGG + chr6_1:101372913-101372932 Msa0902670:three_prime_UTR 25.0%
! AAATATTGTAATAGAGGAAG+GGG + chr6_1:101372914-101372933 Msa0902670:three_prime_UTR 25.0%
!!! CTTTTGTTTCTCTTTAATTC+GGG - chr6_1:101372966-101372985 None:intergenic 25.0%
! AGATTGAGAATTATTCAGTT+AGG - chr6_1:101373103-101373122 None:intergenic 25.0%
!!! TAATTTGTATTGATTAGGAG+TGG - chr6_1:101373186-101373205 None:intergenic 25.0%
!!! TGCAGTAATTTGTATTGATT+AGG - chr6_1:101373191-101373210 None:intergenic 25.0%
! TCAAATAATCTGTTAGGTAT+CGG - chr6_1:101373335-101373354 None:intergenic 25.0%
! ACAAACTCAAATAATCTGTT+AGG - chr6_1:101373341-101373360 None:intergenic 25.0%
! TGACAAAATGTGATAGAAAA+TGG + chr6_1:101373392-101373411 Msa0902670:three_prime_UTR 25.0%
! GAAGATTTTTCATCAACCAA+AGG - chr6_1:101364145-101364164 None:intergenic 30.0%
CAAAAGAATAACTAGTTGCA+TGG - chr6_1:101364176-101364195 None:intergenic 30.0%
GCATAAAGATGAAACTTTCA+AGG - chr6_1:101364362-101364381 None:intergenic 30.0%
!! TGGCAACAAGTTATTTTATG+TGG + chr6_1:101364485-101364504 Msa0902670:intron 30.0%
!! CAAGTTATTTTATGTGGAGT+TGG + chr6_1:101364491-101364510 Msa0902670:intron 30.0%
!! ATTAATGGACTGTAATTGTG+CGG - chr6_1:101364528-101364547 None:intergenic 30.0%
ATTACAGTCCATTAATTAGG+TGG + chr6_1:101364532-101364551 Msa0902670:intron 30.0%
!!! GGCAAATTTATTTTGATTCC+AGG - chr6_1:101364825-101364844 None:intergenic 30.0%
! AAGATTTCACATGTTTTGTG+GGG + chr6_1:101364923-101364942 Msa0902670:intron 30.0%
! TTCTAGAAGCTAAAAGAACA+AGG - chr6_1:101365011-101365030 None:intergenic 30.0%
! GATATTATACTATTTTCCCC+AGG + chr6_1:101365077-101365096 Msa0902670:intron 30.0%
!!! TTCTGGAATTTAGCTTGTTT+TGG + chr6_1:101365117-101365136 Msa0902670:intron 30.0%
! TTTATGGTTTTCCTATTCTC+AGG + chr6_1:101365141-101365160 Msa0902670:intron 30.0%
!! AAATCTTATATATGGGTTGG+GGG + chr6_1:101365367-101365386 Msa0902670:intron 30.0%
AATTGTTACTGTTCAATGGT+TGG - chr6_1:101365471-101365490 None:intergenic 30.0%
CTAATGTTTAATAGTGACTC+AGG + chr6_1:101365604-101365623 Msa0902670:intron 30.0%
ACACATTAATGATATCTTGC+CGG + chr6_1:101365803-101365822 Msa0902670:intron 30.0%
ACAGATGGTTTATAAAGCAA+AGG - chr6_1:101365900-101365919 None:intergenic 30.0%
AAGCAAGAAGAAAAAACAGA+TGG - chr6_1:101365915-101365934 None:intergenic 30.0%
!!! ATCTGTTTTTTCTTCTTGCT+TGG + chr6_1:101365914-101365933 Msa0902670:intron 30.0%
ATTATTGTTAATTCGCTTGC+TGG + chr6_1:101365941-101365960 Msa0902670:intron 30.0%
! GACAGAATAAGTTTTCTGTT+AGG - chr6_1:101366104-101366123 None:intergenic 30.0%
TCTCTTTATCTGTATGTACA+GGG - chr6_1:101366150-101366169 None:intergenic 30.0%
TTCTCTTTATCTGTATGTAC+AGG - chr6_1:101366151-101366170 None:intergenic 30.0%
AAATAATAAGAGGCCCATTA+GGG - chr6_1:101366189-101366208 None:intergenic 30.0%
TAAATAATAAGAGGCCCATT+AGG - chr6_1:101366190-101366209 None:intergenic 30.0%
TTATTAGTAAGTGGTCCATT+AGG - chr6_1:101366215-101366234 None:intergenic 30.0%
GGCATTATCAGGAAAATTAT+GGG - chr6_1:101366328-101366347 None:intergenic 30.0%
AAACAAAGAATGAAATGGAG+TGG - chr6_1:101366436-101366455 None:intergenic 30.0%
ACTCCAAGAAAATTTGATCT+TGG + chr6_1:101366479-101366498 Msa0902670:intron 30.0%
! TGTCCAAGATCAAATTTTCT+TGG - chr6_1:101366485-101366504 None:intergenic 30.0%
TTGTAGTGTAAGGAAGAAAA+AGG + chr6_1:101366527-101366546 Msa0902670:intron 30.0%
CTAATTATGAATAATACGGG+AGG - chr6_1:101366598-101366617 None:intergenic 30.0%
CTCCCGTATTATTCATAATT+AGG + chr6_1:101366596-101366615 Msa0902670:intron 30.0%
TTACTTAGGAAACACCTATA+TGG + chr6_1:101366624-101366643 Msa0902670:intron 30.0%
TAGGTACTTACTTTCCATAT+AGG - chr6_1:101366641-101366660 None:intergenic 30.0%
TATGGAAAGTAAGTACCTAA+AGG + chr6_1:101366642-101366661 Msa0902670:intron 30.0%
CTAATTAATCGCGAAAGATT+AGG - chr6_1:101366826-101366845 None:intergenic 30.0%
CTAATCTTTCGCGATTAATT+AGG + chr6_1:101366824-101366843 Msa0902670:intron 30.0%
ATATATATTGAGAGATGAGG+AGG - chr6_1:101367067-101367086 None:intergenic 30.0%
! GCAAAAGGAGCATATAATAA+TGG - chr6_1:101367134-101367153 None:intergenic 30.0%
GAACACATCCATAAACAAAA+TGG - chr6_1:101367302-101367321 None:intergenic 30.0%
TACTATTGGTATTCATAGCA+AGG + chr6_1:101367542-101367561 Msa0902670:intron 30.0%
! ATATTTCTATACACGTGAGA+TGG + chr6_1:101367663-101367682 Msa0902670:intron 30.0%
CTAGTAGTAGGATTAATGAT+AGG - chr6_1:101367709-101367728 None:intergenic 30.0%
!! TATCAAGATTTGCTAGTAGT+AGG - chr6_1:101367721-101367740 None:intergenic 30.0%
GATGTATATGCTTTACCTTA+AGG + chr6_1:101367769-101367788 Msa0902670:intron 30.0%
TGTATATGCTTTACCTTAAG+GGG + chr6_1:101367771-101367790 Msa0902670:intron 30.0%
TAATATCCTGATTGTGTTTC+TGG + chr6_1:101367825-101367844 Msa0902670:intron 30.0%
ATAATACCAGAAACACAATC+AGG - chr6_1:101367834-101367853 None:intergenic 30.0%
!!! TTTTTTATTCCTTAACCGGT+AGG + chr6_1:101367877-101367896 Msa0902670:intron 30.0%
! TTTTTATTCCTTAACCGGTA+GGG + chr6_1:101367878-101367897 Msa0902670:intron 30.0%
ATAGCATAGAGCATAATGAT+CGG - chr6_1:101367989-101368008 None:intergenic 30.0%
GAAACAAAACTAAACACTCA+AGG - chr6_1:101368042-101368061 None:intergenic 30.0%
AGCTAGGATATATTTACAGA+AGG + chr6_1:101368201-101368220 Msa0902670:intron 30.0%
GACAAAGAATTTCTAAACCA+GGG - chr6_1:101368362-101368381 None:intergenic 30.0%
AGACAAAGAATTTCTAAACC+AGG - chr6_1:101368363-101368382 None:intergenic 30.0%
GCCATGAATAAAATGTCTTT+AGG - chr6_1:101368437-101368456 None:intergenic 30.0%
! TACTGCATAATTTTGTCTCT+TGG + chr6_1:101368562-101368581 Msa0902670:intron 30.0%
TAGTCAATAATCCCTTTCTT+GGG - chr6_1:101368619-101368638 None:intergenic 30.0%
ATAGTCAATAATCCCTTTCT+TGG - chr6_1:101368620-101368639 None:intergenic 30.0%
!!! CTTACATGTTTTTTCTTCCT+AGG + chr6_1:101368664-101368683 Msa0902670:intron 30.0%
AGAATAGGTATTATGTGTCT+AGG + chr6_1:101368720-101368739 Msa0902670:intron 30.0%
GAATAGGTATTATGTGTCTA+GGG + chr6_1:101368721-101368740 Msa0902670:intron 30.0%
ACTGAAATTTACCTTTCCAA+TGG + chr6_1:101368757-101368776 Msa0902670:intron 30.0%
AAGTGAAAAAAGCCATTGAA+TGG + chr6_1:101368867-101368886 Msa0902670:CDS 30.0%
!!! ACATTCTTTTGAGGTGAATA+TGG - chr6_1:101369010-101369029 None:intergenic 30.0%
!! CTTGTAATGGAAAGTTTTTC+TGG + chr6_1:101369131-101369150 Msa0902670:intron 30.0%
! GGATTCTTTTGTGTTTAGAT+TGG + chr6_1:101369152-101369171 Msa0902670:intron 30.0%
GAAACACCTAAACTATCTAA+TGG + chr6_1:101369220-101369239 Msa0902670:intron 30.0%
AAAAAGAGTTCCTACGAATA+AGG - chr6_1:101369425-101369444 None:intergenic 30.0%
!!! AGCCTGGTTTTTAAAATGAT+GGG - chr6_1:101369555-101369574 None:intergenic 30.0%
!!! TAGCCTGGTTTTTAAAATGA+TGG - chr6_1:101369556-101369575 None:intergenic 30.0%
! TTAATTTGGGAGTTCAATCA+GGG - chr6_1:101369985-101370004 None:intergenic 30.0%
!! TTTAATTTGGGAGTTCAATC+AGG - chr6_1:101369986-101370005 None:intergenic 30.0%
!!! TAGAGATGAACAGTTTTTTG+AGG - chr6_1:101370146-101370165 None:intergenic 30.0%
! TGGAAAAAGCGTATTGATAA+TGG - chr6_1:101370264-101370283 None:intergenic 30.0%
!!! TATCAATACGCTTTTTCCAT+TGG + chr6_1:101370265-101370284 Msa0902670:CDS 30.0%
TATCTTCTTCAACACCATTA+GGG - chr6_1:101370310-101370329 None:intergenic 30.0%
TTATCTTCTTCAACACCATT+AGG - chr6_1:101370311-101370330 None:intergenic 30.0%
TTCAAACAGTTACCATGATT+TGG + chr6_1:101370331-101370350 Msa0902670:CDS 30.0%
GAATCTAAGAAACCAAATAG+AGG + chr6_1:101370437-101370456 Msa0902670:CDS 30.0%
GATTTACTATGACCTCTATT+TGG - chr6_1:101370452-101370471 None:intergenic 30.0%
ATAGTAGTTGCATACAATAG+GGG - chr6_1:101370601-101370620 None:intergenic 30.0%
GAATAGTAGTTGCATACAAT+AGG - chr6_1:101370603-101370622 None:intergenic 30.0%
! TACTAATTAGAGGGCATAAT+TGG - chr6_1:101370915-101370934 None:intergenic 30.0%
TACACACGATACTAATTAGA+GGG - chr6_1:101370924-101370943 None:intergenic 30.0%
ATACACACGATACTAATTAG+AGG - chr6_1:101370925-101370944 None:intergenic 30.0%
! ATTCTTTTGCAGAAATCACT+TGG - chr6_1:101371364-101371383 None:intergenic 30.0%
! AATGATAATGAGTGATGAGA+TGG - chr6_1:101371424-101371443 None:intergenic 30.0%
!! TATAAGACCATTTTTCCCTA+TGG - chr6_1:101371499-101371518 None:intergenic 30.0%
AAAAAAACGAAATGGAAGCA+TGG - chr6_1:101371610-101371629 None:intergenic 30.0%
!!! ATTGGAAATATTTTGGCTTG+AGG - chr6_1:101371829-101371848 None:intergenic 30.0%
!!! CAACCTATCATCTTTTTTCT+TGG - chr6_1:101371867-101371886 None:intergenic 30.0%
!! AATATTTTGGGTAACGGTTA+TGG - chr6_1:101371890-101371909 None:intergenic 30.0%
!! AGGGGGTATGAAAATATTTT+GGG - chr6_1:101371902-101371921 None:intergenic 30.0%
!!! TAATAGAATGAGTTTTGGAG+GGG - chr6_1:101371938-101371957 None:intergenic 30.0%
AAAGGTCCATTATTAATGTG+GGG - chr6_1:101372028-101372047 None:intergenic 30.0%
GAAAGGTCCATTATTAATGT+GGG - chr6_1:101372029-101372048 None:intergenic 30.0%
TGAAAGGTCCATTATTAATG+TGG - chr6_1:101372030-101372049 None:intergenic 30.0%
ATAGGGTCACTATTAATGAA+AGG - chr6_1:101372046-101372065 None:intergenic 30.0%
CACATTAGTTGAAATCTGAT+AGG - chr6_1:101372064-101372083 None:intergenic 30.0%
TTCATACATGCTATTATTCC+TGG + chr6_1:101372421-101372440 Msa0902670:three_prime_UTR 30.0%
!! CATTTCTGGTGTAAGAAATT+CGG + chr6_1:101372539-101372558 Msa0902670:intron 30.0%
! TTCTTTCTTTTCCTGCTTAT+AGG + chr6_1:101372752-101372771 Msa0902670:intron 30.0%
! TCTTTCTTTTCCTGCTTATA+GGG + chr6_1:101372753-101372772 Msa0902670:intron 30.0%
!!! TAGGAACCTTATTGGTTTTT+GGG - chr6_1:101373084-101373103 None:intergenic 30.0%
!!! TTAGGAACCTTATTGGTTTT+TGG - chr6_1:101373085-101373104 None:intergenic 30.0%
TATTCAGTTAGGAACCTTAT+TGG - chr6_1:101373092-101373111 None:intergenic 30.0%
CAAATAATCTGTTAGGTATC+GGG - chr6_1:101373334-101373353 None:intergenic 30.0%
GGGAGTTTGAATAATACCTT+TGG + chr6_1:101364126-101364145 Msa0902670:intron 35.0%
GCGTTTACAAATCACTATGA+AGG - chr6_1:101364228-101364247 None:intergenic 35.0%
! CATAGTGATTTGTAAACGCT+TGG + chr6_1:101364229-101364248 Msa0902670:intron 35.0%
!! CAGTTGGTAACAGATATATG+AGG + chr6_1:101364252-101364271 Msa0902670:intron 35.0%
! AGAAAAAATCGTCTGAGATC+TGG + chr6_1:101364289-101364308 Msa0902670:intron 35.0%
GAGTTTCAGGAGAATTACAT+TGG - chr6_1:101364387-101364406 None:intergenic 35.0%
CATTCTAATTGTGCTATGTG+AGG + chr6_1:101364416-101364435 Msa0902670:intron 35.0%
! ATGAAAGTATAGATGGCATG+GGG - chr6_1:101364574-101364593 None:intergenic 35.0%
! GATGAAAGTATAGATGGCAT+GGG - chr6_1:101364575-101364594 None:intergenic 35.0%
! AGATGAAAGTATAGATGGCA+TGG - chr6_1:101364576-101364595 None:intergenic 35.0%
TGTGGTCTGTACTACAAAAA+GGG - chr6_1:101364623-101364642 None:intergenic 35.0%
ATACATAGTTTACTGCTCTG+TGG - chr6_1:101364641-101364660 None:intergenic 35.0%
!! CAACCAAGTTTTATCCATCT+AGG + chr6_1:101364673-101364692 Msa0902670:intron 35.0%
AATAGTGCATGTGCATGTTA+GGG - chr6_1:101364733-101364752 None:intergenic 35.0%
AAATAGTGCATGTGCATGTT+AGG - chr6_1:101364734-101364753 None:intergenic 35.0%
! ACAAAGTATTCCAAATTCCC+CGG + chr6_1:101364871-101364890 Msa0902670:intron 35.0%
CTCCCTAACATTCGTAATTT+AGG + chr6_1:101364895-101364914 Msa0902670:intron 35.0%
TCCTTTCTTGAATGAGTCTT+GGG + chr6_1:101365044-101365063 Msa0902670:intron 35.0%
!! TAGTCGAAAACTTGGTTTTC+TGG + chr6_1:101365100-101365119 Msa0902670:intron 35.0%
GATTGTTACTGTTCAATGGT+TGG - chr6_1:101365449-101365468 None:intergenic 35.0%
GTTGGATTGTTACTGTTCAA+TGG - chr6_1:101365453-101365472 None:intergenic 35.0%
ATGTTTAATAGTGACTCAGG+TGG + chr6_1:101365607-101365626 Msa0902670:intron 35.0%
TGAAAACAGCACTCAAAAGA+TGG - chr6_1:101365684-101365703 None:intergenic 35.0%
!!! TGCTGTTTTCATGATTGTAC+AGG + chr6_1:101365693-101365712 Msa0902670:CDS 35.0%
ATACACAGACTCTGCAATTA+AGG + chr6_1:101365857-101365876 Msa0902670:intron 35.0%
CTCTTTATCTGTATGTACAG+GGG - chr6_1:101366149-101366168 None:intergenic 35.0%
TTCTGACTATGCATGTTGTT+AGG - chr6_1:101366293-101366312 None:intergenic 35.0%
CGGCATTATCAGGAAAATTA+TGG - chr6_1:101366329-101366348 None:intergenic 35.0%
ATCTTGGACACTAGAAATTG+TGG + chr6_1:101366495-101366514 Msa0902670:intron 35.0%
! GATATGAGTGTTGTAGTGTA+AGG + chr6_1:101366517-101366536 Msa0902670:intron 35.0%
! AAGAGAAGTCTTGTACCTAA+TGG + chr6_1:101366571-101366590 Msa0902670:intron 35.0%
AATGTGGAAATGCTACCTTT+AGG - chr6_1:101366660-101366679 None:intergenic 35.0%
CAATGGAAGTTTCTTCAATG+TGG - chr6_1:101366676-101366695 None:intergenic 35.0%
CACATTGAAGAAACTTCCAT+TGG + chr6_1:101366674-101366693 Msa0902670:intron 35.0%
AAGAATCCCAGGAATACAAT+AGG - chr6_1:101366772-101366791 None:intergenic 35.0%
ACACTATCCAATTGTTACAC+TGG + chr6_1:101367029-101367048 Msa0902670:intron 35.0%
CATTACACCAGTGTAACAAT+TGG - chr6_1:101367039-101367058 None:intergenic 35.0%
!!! CCACTTTTGTTTTGTTTCGA+GGG - chr6_1:101367198-101367217 None:intergenic 35.0%
CCTCGAAACAAAACAAAAGT+GGG + chr6_1:101367196-101367215 Msa0902670:intron 35.0%
!!! ACTAAATGTTTTGGGAGATG+AGG - chr6_1:101367335-101367354 None:intergenic 35.0%
GAGCTTATATTGAGGAACAA+AGG + chr6_1:101367458-101367477 Msa0902670:intron 35.0%
TAAAAACTAGGTTACCCTTG+AGG - chr6_1:101367591-101367610 None:intergenic 35.0%
!!! GGGTAACCTAGTTTTTAGTT+CGG + chr6_1:101367594-101367613 Msa0902670:intron 35.0%
CTATAGCAAGGTTTCTCTTT+GGG - chr6_1:101367625-101367644 None:intergenic 35.0%
TCTATAGCAAGGTTTCTCTT+TGG - chr6_1:101367626-101367645 None:intergenic 35.0%
ACGTGAGATGGAATCTAAAT+AGG + chr6_1:101367675-101367694 Msa0902670:intron 35.0%
AGTAACTTAGAGACTAAGCT+AGG + chr6_1:101368185-101368204 Msa0902670:intron 35.0%
GCTAAGTAACTTAGAGAGTA+AGG + chr6_1:101368246-101368265 Msa0902670:intron 35.0%
TCTTTGTCTTGACAATCTTG+TGG + chr6_1:101368374-101368393 Msa0902670:intron 35.0%
! CATTTTATTCATGGCAGACA+AGG + chr6_1:101368442-101368461 Msa0902670:intron 35.0%
!! GCAATAGCCATTGATAATGA+AGG - chr6_1:101368597-101368616 None:intergenic 35.0%
TAAAGTGCAAACCATTGGAA+AGG - chr6_1:101368771-101368790 None:intergenic 35.0%
GTTGCTCAAAATCCATTCAA+TGG - chr6_1:101368882-101368901 None:intergenic 35.0%
AGAAATATCCCAAGAAAGTG+AGG + chr6_1:101368964-101368983 Msa0902670:CDS 35.0%
AGGTGAATATGGCAAAAATG+TGG - chr6_1:101368999-101369018 None:intergenic 35.0%
!! ATTGCTTTTCCGTGAAAAGA+TGG - chr6_1:101369043-101369062 None:intergenic 35.0%
!! GATTGAACTTTCGAGTTAAC+TGG - chr6_1:101369479-101369498 None:intergenic 35.0%
ACTCGAAAGTTCAATCTGAT+AGG + chr6_1:101369483-101369502 Msa0902670:intron 35.0%
TTCAATCTGATAGGTGAAGA+AGG + chr6_1:101369492-101369511 Msa0902670:intron 35.0%
!! GTCCCATCATTTTAAAAACC+AGG + chr6_1:101369550-101369569 Msa0902670:intron 35.0%
AAATTGGACAGAATTGTGAG+AGG + chr6_1:101369583-101369602 Msa0902670:intron 35.0%
TGTAGCTGTAATGAACTCAT+GGG - chr6_1:101369901-101369920 None:intergenic 35.0%
TAACAGATTGGTGGAAGATT+GGG + chr6_1:101370008-101370027 Msa0902670:intron 35.0%
CTGACAATCAATAAAAGCCT+TGG - chr6_1:101370066-101370085 None:intergenic 35.0%
TTGATTGTCAGCATGATTCT+CGG + chr6_1:101370075-101370094 Msa0902670:CDS 35.0%
TTCTCGGGTCAGTTTAAATT+TGG + chr6_1:101370091-101370110 Msa0902670:intron 35.0%
ATATCCCTTGCTTTGCATTT+AGG + chr6_1:101370169-101370188 Msa0902670:intron 35.0%
! TCTCAACCTCTTTTCTACAA+AGG + chr6_1:101370515-101370534 Msa0902670:CDS 35.0%
TTGGTTATCACATGGTAAAC+TGG + chr6_1:101370540-101370559 Msa0902670:intron 35.0%
TTATCACATGGTAAACTGGT+TGG + chr6_1:101370544-101370563 Msa0902670:intron 35.0%
TAGTAGTTGCATACAATAGG+GGG - chr6_1:101370600-101370619 None:intergenic 35.0%
CTCTCTTAATATGCTTGTGT+AGG + chr6_1:101370677-101370696 Msa0902670:intron 35.0%
! ATATCTTCTGTTTCTTCCAG+TGG + chr6_1:101371098-101371117 Msa0902670:intron 35.0%
ACTTCAAGATTTCTACCACA+CGG - chr6_1:101371202-101371221 None:intergenic 35.0%
GGTCAAACTAAAAGAGATAG+AGG - chr6_1:101371396-101371415 None:intergenic 35.0%
ATGAGTGATGAGATGGATAA+TGG - chr6_1:101371417-101371436 None:intergenic 35.0%
TTCAACACCATAGGGAAAAA+TGG + chr6_1:101371489-101371508 Msa0902670:intron 35.0%
ATTGGAACAGGATGAAAGTA+AGG - chr6_1:101371579-101371598 None:intergenic 35.0%
TTCTGTTGTACAGTTACAGA+GGG - chr6_1:101371755-101371774 None:intergenic 35.0%
TTTCTGTTGTACAGTTACAG+AGG - chr6_1:101371756-101371775 None:intergenic 35.0%
!!! GAAATATTTTGGCTTGAGGA+AGG - chr6_1:101371825-101371844 None:intergenic 35.0%
!! GAGGGGGTATGAAAATATTT+TGG - chr6_1:101371903-101371922 None:intergenic 35.0%
!!! AATAGAATGAGTTTTGGAGG+GGG - chr6_1:101371937-101371956 None:intergenic 35.0%
AAGGTCCATTATTAATGTGG+GGG - chr6_1:101372027-101372046 None:intergenic 35.0%
TGTGTTAATGAAACCCATCT+TGG + chr6_1:101372080-101372099 Msa0902670:intron 35.0%
GTGTTAATGAAACCCATCTT+GGG + chr6_1:101372081-101372100 Msa0902670:intron 35.0%
TGTTAATGAAACCCATCTTG+GGG + chr6_1:101372082-101372101 Msa0902670:intron 35.0%
CATAAGTCTACTCTATCAGA+TGG - chr6_1:101372667-101372686 None:intergenic 35.0%
! CTTTCTTTTCCTGCTTATAG+GGG + chr6_1:101372754-101372773 Msa0902670:intron 35.0%
AATATTCATCCCCTATAAGC+AGG - chr6_1:101372766-101372785 None:intergenic 35.0%
!!! TTTTGCTCTAGGATTACAGA+GGG - chr6_1:101373032-101373051 None:intergenic 35.0%
! TATTGATTAGGAGTGGTTAC+AGG - chr6_1:101373179-101373198 None:intergenic 35.0%
TGTATTCATTAGGAGCAGTT+AGG - chr6_1:101373221-101373240 None:intergenic 35.0%
ATTTGTAAACGCTTGGCAGT+TGG + chr6_1:101364236-101364255 Msa0902670:intron 40.0%
CACAATTAGAATGAATCGCG+AGG - chr6_1:101364409-101364428 None:intergenic 40.0%
TAATTGTGCTATGTGAGGCA+TGG + chr6_1:101364421-101364440 Msa0902670:intron 40.0%
ACAGTCCATTAATTAGGTGG+TGG + chr6_1:101364535-101364554 Msa0902670:intron 40.0%
AACAGCCACCACCTAATTAA+TGG - chr6_1:101364543-101364562 None:intergenic 40.0%
CTGTGGTCTGTACTACAAAA+AGG - chr6_1:101364624-101364643 None:intergenic 40.0%
CCACCTAGATGGATAAAACT+TGG - chr6_1:101364679-101364698 None:intergenic 40.0%
!! CCAAGTTTTATCCATCTAGG+TGG + chr6_1:101364676-101364695 Msa0902670:intron 40.0%
TTATCCATCTAGGTGGTGTA+AGG + chr6_1:101364683-101364702 Msa0902670:intron 40.0%
TATCCATCTAGGTGGTGTAA+GGG + chr6_1:101364684-101364703 Msa0902670:intron 40.0%
GAAAGAGACGCATCAATGAA+TGG - chr6_1:101364784-101364803 None:intergenic 40.0%
TCATTGATGCGTCTCTTTCT+TGG + chr6_1:101364785-101364804 Msa0902670:intron 40.0%
ATTACGAATGTTAGGGAGAC+CGG - chr6_1:101364893-101364912 None:intergenic 40.0%
CTCCTTTCTTGAATGAGTCT+TGG + chr6_1:101365043-101365062 Msa0902670:intron 40.0%
TCCCAAGACTCATTCAAGAA+AGG - chr6_1:101365048-101365067 None:intergenic 40.0%
! AACCAAGTTTTCGACTACCT+GGG - chr6_1:101365097-101365116 None:intergenic 40.0%
! AAACCAAGTTTTCGACTACC+TGG - chr6_1:101365098-101365117 None:intergenic 40.0%
! TCAGAATCGGAGTTCTTTTC+TGG + chr6_1:101365274-101365293 Msa0902670:CDS 40.0%
TTTAATAGTGACTCAGGTGG+TGG + chr6_1:101365610-101365629 Msa0902670:intron 40.0%
GTATGTACAGGGGAATTCTT+AGG - chr6_1:101366139-101366158 None:intergenic 40.0%
CAACTTTACTCGGCATTATC+AGG - chr6_1:101366339-101366358 None:intergenic 40.0%
AGGAAGAAAAAGGTCAGACA+TGG + chr6_1:101366537-101366556 Msa0902670:intron 40.0%
AATAATACGGGAGGACCATT+AGG - chr6_1:101366589-101366608 None:intergenic 40.0%
TCAATGCTTCTAATCGCCAA+TGG - chr6_1:101366693-101366712 None:intergenic 40.0%
AGAAACTAGCAAAGAATCCC+AGG - chr6_1:101366783-101366802 None:intergenic 40.0%
CCCTCGAAACAAAACAAAAG+TGG + chr6_1:101367195-101367214 Msa0902670:intron 40.0%
!!! CCCACTTTTGTTTTGTTTCG+AGG - chr6_1:101367199-101367218 None:intergenic 40.0%
CCTTGAGGACACAAAGAATA+GGG - chr6_1:101367576-101367595 None:intergenic 40.0%
CCTATTCTTTGTGTCCTCAA+GGG + chr6_1:101367574-101367593 Msa0902670:intron 40.0%
GCATCACCGAACTAAAAACT+AGG - chr6_1:101367603-101367622 None:intergenic 40.0%
TTAACCTGATCAATCCCTAC+CGG - chr6_1:101367895-101367914 None:intergenic 40.0%
ACATGAATCAAAATGCTCCC+TGG + chr6_1:101368342-101368361 Msa0902670:intron 40.0%
AATGGCTATTGCCCAAGAAA+GGG + chr6_1:101368605-101368624 Msa0902670:intron 40.0%
GCTGATAAAGTGCAAACCAT+TGG - chr6_1:101368776-101368795 None:intergenic 40.0%
! TGGATTTTGAGCAACTGTGA+TGG + chr6_1:101368887-101368906 Msa0902670:CDS 40.0%
ACCATGAACCTCACTTTCTT+GGG - chr6_1:101368975-101368994 None:intergenic 40.0%
TACCATGAACCTCACTTTCT+TGG - chr6_1:101368976-101368995 None:intergenic 40.0%
ACCTCAAAAGAATGTTGCCA+AGG + chr6_1:101369015-101369034 Msa0902670:CDS 40.0%
CCTCAAAAGAATGTTGCCAA+GGG + chr6_1:101369016-101369035 Msa0902670:CDS 40.0%
! AGTTTAGGTGTTTCTGTGAG+AGG - chr6_1:101369214-101369233 None:intergenic 40.0%
ACCAGGCTACAAAACGAAAT+TGG + chr6_1:101369567-101369586 Msa0902670:intron 40.0%
! TCCAATTTCGTTTTGTAGCC+TGG - chr6_1:101369571-101369590 None:intergenic 40.0%
CTTAAGGGAACAGAAAGTAG+TGG - chr6_1:101369647-101369666 None:intergenic 40.0%
GCAAACCACTCAAGTCTTAA+GGG - chr6_1:101369662-101369681 None:intergenic 40.0%
GCAATACATCAGCTCTGTTT+AGG - chr6_1:101369773-101369792 None:intergenic 40.0%
CTGTAGCTGTAATGAACTCA+TGG - chr6_1:101369902-101369921 None:intergenic 40.0%
CTAACAGATTGGTGGAAGAT+TGG + chr6_1:101370007-101370026 Msa0902670:intron 40.0%
TGATTGTCAGCATGATTCTC+GGG + chr6_1:101370076-101370095 Msa0902670:CDS 40.0%
GACACCTAAATGCAAAGCAA+GGG - chr6_1:101370176-101370195 None:intergenic 40.0%
TGACACCTAAATGCAAAGCA+AGG - chr6_1:101370177-101370196 None:intergenic 40.0%
CATTGGATGCATTGTCTTCT+GGG + chr6_1:101370282-101370301 Msa0902670:CDS 40.0%
ATTGGATGCATTGTCTTCTG+GGG + chr6_1:101370283-101370302 Msa0902670:CDS 40.0%
CATTGTTAGTCGCCAAATCA+TGG - chr6_1:101370346-101370365 None:intergenic 40.0%
CCAACACCTTTGTAGAAAAG+AGG - chr6_1:101370524-101370543 None:intergenic 40.0%
!! CCTCTTTTCTACAAAGGTGT+TGG + chr6_1:101370521-101370540 Msa0902670:CDS 40.0%
!! CAAAGGTGTTGGTTATCACA+TGG + chr6_1:101370532-101370551 Msa0902670:CDS 40.0%
AAATGCATTCTCACAGCTGA+GGG - chr6_1:101371067-101371086 None:intergenic 40.0%
TAAATGCATTCTCACAGCTG+AGG - chr6_1:101371068-101371087 None:intergenic 40.0%
! ACAACTTCTGAAGATAGTGC+TGG - chr6_1:101371176-101371195 None:intergenic 40.0%
AGAACATGTCAACTTGTGCT+TGG + chr6_1:101371233-101371252 Msa0902670:three_prime_UTR 40.0%
GAACATGTCAACTTGTGCTT+GGG + chr6_1:101371234-101371253 Msa0902670:three_prime_UTR 40.0%
AACATGTCAACTTGTGCTTG+GGG + chr6_1:101371235-101371254 Msa0902670:three_prime_UTR 40.0%
! TCCCTATGGTGTTGAATGTT+GGG - chr6_1:101371485-101371504 None:intergenic 40.0%
! TTCCCTATGGTGTTGAATGT+TGG - chr6_1:101371486-101371505 None:intergenic 40.0%
ATGGATGAGAAGATTGGAAC+AGG - chr6_1:101371591-101371610 None:intergenic 40.0%
GCTCTGCAATTTACAATCTG+AGG + chr6_1:101371724-101371743 Msa0902670:intron 40.0%
GTAGAAACGAAGAAGACAGT+TGG + chr6_1:101371791-101371810 Msa0902670:intron 40.0%
!!! ATAGAATGAGTTTTGGAGGG+GGG - chr6_1:101371936-101371955 None:intergenic 40.0%
TTCTCCCCCCACATTAATAA+TGG + chr6_1:101372019-101372038 Msa0902670:intron 40.0%
AGGTCCATTATTAATGTGGG+GGG - chr6_1:101372026-101372045 None:intergenic 40.0%
CAATATATGCTCCCCAAGAT+GGG - chr6_1:101372096-101372115 None:intergenic 40.0%
TCAATATATGCTCCCCAAGA+TGG - chr6_1:101372097-101372116 None:intergenic 40.0%
GCTTATATATTGTCCTGCAC+TGG + chr6_1:101372131-101372150 Msa0902670:intron 40.0%
TTTAACTCAGCATTGTCCTG+CGG - chr6_1:101372164-101372183 None:intergenic 40.0%
AACAGCTGCAGCATTTACTT+AGG - chr6_1:101372233-101372252 None:intergenic 40.0%
!!! GCTGCAGCTGTTGATTTTTT+CGG + chr6_1:101372241-101372260 Msa0902670:intron 40.0%
CTAAATTGTGTTCAGGTGTC+TGG + chr6_1:101372346-101372365 Msa0902670:intron 40.0%
AAGTCTACTCTATCAGATGG+AGG - chr6_1:101372664-101372683 None:intergenic 40.0%
GGATTGGAGAATCATTGCAA+GGG - chr6_1:101372867-101372886 None:intergenic 40.0%
CAAAGGAAAAGTAGAGGGAT+TGG - chr6_1:101372883-101372902 None:intergenic 40.0%
CCACTCAAAGGAAAAGTAGA+GGG - chr6_1:101372888-101372907 None:intergenic 40.0%
TCCACTCAAAGGAAAAGTAG+AGG - chr6_1:101372889-101372908 None:intergenic 40.0%
!!! CTTTTGCTCTAGGATTACAG+AGG - chr6_1:101373033-101373052 None:intergenic 40.0%
TCTCTGCCCAAAAACCAATA+AGG + chr6_1:101373075-101373094 Msa0902670:three_prime_UTR 40.0%
ACCATTTGGCAACAACAGTA+GGG - chr6_1:101373126-101373145 None:intergenic 40.0%
!! ATAATCTGTTAGGTATCGGG+TGG - chr6_1:101373331-101373350 None:intergenic 40.0%
!! CTAAAGTGCTGAGTAACTGA+AGG + chr6_1:101373366-101373385 Msa0902670:three_prime_UTR 40.0%
AATGAATCGCGAGGAGTTTC+AGG - chr6_1:101364400-101364419 None:intergenic 45.0%
GGCATGGAATCTGAAAACCT+TGG + chr6_1:101364437-101364456 Msa0902670:intron 45.0%
GGAATCTGAAAACCTTGGAG+TGG + chr6_1:101364442-101364461 Msa0902670:intron 45.0%
GTACTACAAAAAGGGCTTCG+AGG - chr6_1:101364615-101364634 None:intergenic 45.0%
TATCCCTTACACCACCTAGA+TGG - chr6_1:101364690-101364709 None:intergenic 45.0%
TTGATGCGTCTCTTTCTTGG+AGG + chr6_1:101364788-101364807 Msa0902670:intron 45.0%
TGATGCGTCTCTTTCTTGGA+GGG + chr6_1:101364789-101364808 Msa0902670:intron 45.0%
!! TTGGAGGGAATTTGTTGACC+TGG + chr6_1:101364804-101364823 Msa0902670:intron 45.0%
TTACGAATGTTAGGGAGACC+GGG - chr6_1:101364892-101364911 None:intergenic 45.0%
! ACCAAGTTTTCGACTACCTG+GGG - chr6_1:101365096-101365115 None:intergenic 45.0%
GGGAAGTTTAGCCTGAGAAT+AGG - chr6_1:101365155-101365174 None:intergenic 45.0%
CTAAACTTCCCTCTGTTCTG+AGG + chr6_1:101365164-101365183 Msa0902670:CDS 45.0%
CGATAGATCCTCAGAACAGA+GGG - chr6_1:101365175-101365194 None:intergenic 45.0%
TCGATAGATCCTCAGAACAG+AGG - chr6_1:101365176-101365195 None:intergenic 45.0%
AACTGGAAGCAACTCAGCAA+CGG - chr6_1:101365239-101365258 None:intergenic 45.0%
GATTCCTCTCTGAGTTGTGT+CGG - chr6_1:101366071-101366090 None:intergenic 45.0%
! TTTTCTGTTAGGGCCAGAGT+AGG - chr6_1:101366093-101366112 None:intergenic 45.0%
CCCTATTCTTTGTGTCCTCA+AGG + chr6_1:101367573-101367592 Msa0902670:intron 45.0%
CCCTTGAGGACACAAAGAAT+AGG - chr6_1:101367577-101367596 None:intergenic 45.0%
! CTTTACCTTAAGGGGCATGT+CGG + chr6_1:101367779-101367798 Msa0902670:intron 45.0%
! TTTACCTTAAGGGGCATGTC+GGG + chr6_1:101367780-101367799 Msa0902670:intron 45.0%
! TGATCAATCCCTACCGGTTA+AGG - chr6_1:101367889-101367908 None:intergenic 45.0%
TTAACCGGTAGGGATTGATC+AGG + chr6_1:101367888-101367907 Msa0902670:intron 45.0%
TGTGCGTCTGAATAGCACTA+CGG + chr6_1:101368140-101368159 Msa0902670:intron 45.0%
TCCACGAATTCTGCAATCAC+AGG + chr6_1:101368471-101368490 Msa0902670:intron 45.0%
TCCTGTGATTGCAGAATTCG+TGG - chr6_1:101368475-101368494 None:intergenic 45.0%
CAATGGCTATTGCCCAAGAA+AGG + chr6_1:101368604-101368623 Msa0902670:intron 45.0%
CCAATACATAGAGTCTCCCT+AGG - chr6_1:101368684-101368703 None:intergenic 45.0%
CCTAGGGAGACTCTATGTAT+TGG + chr6_1:101368681-101368700 Msa0902670:intron 45.0%
GATTGCAGGCACATTTAGTG+CGG + chr6_1:101368837-101368856 Msa0902670:intron 45.0%
ATTGCAGGCACATTTAGTGC+GGG + chr6_1:101368838-101368857 Msa0902670:intron 45.0%
TCCCAAGAAAGTGAGGTTCA+TGG + chr6_1:101368971-101368990 Msa0902670:CDS 45.0%
! CCCTTGGCAACATTCTTTTG+AGG - chr6_1:101369019-101369038 None:intergenic 45.0%
CTGTTCCCTTAAGACTTGAG+TGG + chr6_1:101369654-101369673 Msa0902670:intron 45.0%
GGCAAACCACTCAAGTCTTA+AGG - chr6_1:101369663-101369682 None:intergenic 45.0%
CTACTACAGCTGAAGTCATG+TGG - chr6_1:101369684-101369703 None:intergenic 45.0%
ACGCAGAAGCTCATGTAAGA+TGG + chr6_1:101369799-101369818 Msa0902670:CDS 45.0%
CGCAGAAGCTCATGTAAGAT+GGG + chr6_1:101369800-101369819 Msa0902670:CDS 45.0%
AACTCCTGCAGTTTCAACCT+AGG - chr6_1:101369858-101369877 None:intergenic 45.0%
AGATTGGGATACAACATCCG+TGG + chr6_1:101370023-101370042 Msa0902670:CDS 45.0%
GATTGGGATACAACATCCGT+GGG + chr6_1:101370024-101370043 Msa0902670:CDS 45.0%
AATTATGGCAGTGCTTGACC+AGG + chr6_1:101370199-101370218 Msa0902670:CDS 45.0%
AGTGCTTGACCAGGAAACAT+GGG + chr6_1:101370208-101370227 Msa0902670:CDS 45.0%
CCAGAAGACAATGCATCCAA+TGG - chr6_1:101370284-101370303 None:intergenic 45.0%
CCATTGGATGCATTGTCTTC+TGG + chr6_1:101370281-101370300 Msa0902670:CDS 45.0%
TGGCGACTAACAATGATGCT+CGG + chr6_1:101370351-101370370 Msa0902670:CDS 45.0%
! TGGTAAACTGGTTGGTCATC+TGG + chr6_1:101370552-101370571 Msa0902670:intron 45.0%
TCACAGCTGAGGGCTAAAAT+GGG - chr6_1:101371057-101371076 None:intergenic 45.0%
CTTGAGCAATATCAAGCCAC+TGG - chr6_1:101371117-101371136 None:intergenic 45.0%
!! CTGAAGATAGTGCTGGCAAA+AGG - chr6_1:101371169-101371188 None:intergenic 45.0%
TTCAGAAGTTGTTCTCCGTG+TGG + chr6_1:101371184-101371203 Msa0902670:three_prime_UTR 45.0%
GTTGAATGTTGGGCAGTGAA+GGG - chr6_1:101371475-101371494 None:intergenic 45.0%
TGTTGAATGTTGGGCAGTGA+AGG - chr6_1:101371476-101371495 None:intergenic 45.0%
TGCCCAACATTCAACACCAT+AGG + chr6_1:101371480-101371499 Msa0902670:intron 45.0%
GCCCAACATTCAACACCATA+GGG + chr6_1:101371481-101371500 Msa0902670:intron 45.0%
! GGAAGCATGGATGAGAAGAT+TGG - chr6_1:101371597-101371616 None:intergenic 45.0%
CATCAAAGAGCTCAGATCCT+TGG - chr6_1:101371653-101371672 None:intergenic 45.0%
!!! TAGAATGAGTTTTGGAGGGG+GGG - chr6_1:101371935-101371954 None:intergenic 45.0%
AATAACAGAATGGGGCACGT+GGG - chr6_1:101372000-101372019 None:intergenic 45.0%
AAATAACAGAATGGGGCACG+TGG - chr6_1:101372001-101372020 None:intergenic 45.0%
GGGGGAGAAATAACAGAATG+GGG - chr6_1:101372008-101372027 None:intergenic 45.0%
GGGGGGAGAAATAACAGAAT+GGG - chr6_1:101372009-101372028 None:intergenic 45.0%
TGGGGGGAGAAATAACAGAA+TGG - chr6_1:101372010-101372029 None:intergenic 45.0%
CTTGTGTGCGAATTTGTACC+AGG - chr6_1:101372442-101372461 None:intergenic 45.0%
AGGAAGGCGAAAAAGGGATT+AGG - chr6_1:101372644-101372663 None:intergenic 45.0%
AGATGGAGGAAGGCGAAAAA+GGG - chr6_1:101372650-101372669 None:intergenic 45.0%
CTACTCTATCAGATGGAGGA+AGG - chr6_1:101372660-101372679 None:intergenic 45.0%
TCATTGCAAGGGAGACTACA+TGG - chr6_1:101372856-101372875 None:intergenic 45.0%
GGGATTGGAGAATCATTGCA+AGG - chr6_1:101372868-101372887 None:intergenic 45.0%
!! CCCTCTACTTTTCCTTTGAG+TGG + chr6_1:101372885-101372904 Msa0902670:three_prime_UTR 45.0%
AGAGAGATGTCTCTTCTCTG+AGG - chr6_1:101373058-101373077 None:intergenic 45.0%
TCCCTACTGTTGTTGCCAAA+TGG + chr6_1:101373122-101373141 Msa0902670:three_prime_UTR 45.0%
GACCATTTGGCAACAACAGT+AGG - chr6_1:101373127-101373146 None:intergenic 45.0%
!! GGTATCGGGTGGTATTGATA+GGG - chr6_1:101373320-101373339 None:intergenic 45.0%
!! AGGTATCGGGTGGTATTGAT+AGG - chr6_1:101373321-101373340 None:intergenic 45.0%
!! TATTAAAAAAATAAAAAAAG+TGG + chr6_1:101367166-101367185 Msa0902670:intron 5.0%
!! ATTAAAAAAATAAAAAAAGT+GGG + chr6_1:101367167-101367186 Msa0902670:intron 5.0%
TGTTGCCAAGACTACCTCTG+CGG - chr6_1:101364473-101364492 None:intergenic 50.0%
TACGAATGTTAGGGAGACCG+GGG - chr6_1:101364891-101364910 None:intergenic 50.0%
TCCCCAGGTAGTCGAAAACT+TGG + chr6_1:101365092-101365111 Msa0902670:intron 50.0%
GAAGCTCGAGCAGCAATAAC+TGG - chr6_1:101365256-101365275 None:intergenic 50.0%
TGCTGCTCGAGCTTCAGAAT+CGG + chr6_1:101365261-101365280 Msa0902670:CDS 50.0%
! TTCTGGAGACAGAGCTGTAG+AGG + chr6_1:101365291-101365310 Msa0902670:CDS 50.0%
TCTGTGCATCTCAGCAATGC+CGG - chr6_1:101365825-101365844 None:intergenic 50.0%
TTGTGTCGGAGCTTTGCTCA+GGG - chr6_1:101366057-101366076 None:intergenic 50.0%
CTCAGAGAGGAATCCTACTC+TGG + chr6_1:101366077-101366096 Msa0902670:intron 50.0%
ATATCCCGACATGCCCCTTA+AGG - chr6_1:101367787-101367806 None:intergenic 50.0%
! GCCAAGGGTCCATCTTTTCA+CGG + chr6_1:101369031-101369050 Msa0902670:CDS 50.0%
TCCGTGAAAAGATGGACCCT+TGG - chr6_1:101369035-101369054 None:intergenic 50.0%
ACCTAGGATGGAGAGTAGCA+CGG - chr6_1:101369842-101369861 None:intergenic 50.0%
CCTGCAGTTTCAACCTAGGA+TGG - chr6_1:101369854-101369873 None:intergenic 50.0%
! CCATCCTAGGTTGAAACTGC+AGG + chr6_1:101369851-101369870 Msa0902670:CDS 50.0%
CCTGTGAATGCAGTATCCCA+CGG - chr6_1:101370043-101370062 None:intergenic 50.0%
GATACTGCATTCACAGGCCA+AGG + chr6_1:101370046-101370065 Msa0902670:CDS 50.0%
CAGTGCTTGACCAGGAAACA+TGG + chr6_1:101370207-101370226 Msa0902670:CDS 50.0%
CTATCTCCACCCATGTTTCC+TGG - chr6_1:101370220-101370239 None:intergenic 50.0%
! TTGTCTTCTGGGGACCCTAA+TGG + chr6_1:101370293-101370312 Msa0902670:CDS 50.0%
TAACAATGATGCTCGGCCGA+TGG + chr6_1:101370358-101370377 Msa0902670:CDS 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG - chr6_1:101370639-101370658 None:intergenic 50.0%
CTCACAGCTGAGGGCTAAAA+TGG - chr6_1:101371058-101371077 None:intergenic 50.0%
ATAACAGAATGGGGCACGTG+GGG - chr6_1:101371999-101372018 None:intergenic 50.0%
!!! CTGCGGTTTTTTTCCAGTGC+AGG - chr6_1:101372147-101372166 None:intergenic 50.0%
CTGCACTGGAAAAAAACCGC+AGG + chr6_1:101372145-101372164 Msa0902670:intron 50.0%
GTCCATCACCTCTAAACACC+TGG + chr6_1:101372375-101372394 Msa0902670:three_prime_UTR 50.0%
CAGATGGAGGAAGGCGAAAA+AGG - chr6_1:101372651-101372670 None:intergenic 50.0%
!! CTCTGAGGAGCTTTTGCTCT+AGG - chr6_1:101373043-101373062 None:intergenic 50.0%
GTTAGGGAGACCGGGGAATT+TGG - chr6_1:101364884-101364903 None:intergenic 55.0%
GACAGAGCTGTAGAGGCAGA+TGG + chr6_1:101365298-101365317 Msa0902670:CDS 55.0%
GTTGTGTCGGAGCTTTGCTC+AGG - chr6_1:101366058-101366077 None:intergenic 55.0%
AGCTCCGACACAACTCAGAG+AGG + chr6_1:101366064-101366083 Msa0902670:intron 55.0%
GTTGCTGCAGCAATTGCGCA+TGG + chr6_1:101368929-101368948 Msa0902670:CDS 55.0%
! TCCGTGCTACTCTCCATCCT+AGG + chr6_1:101369838-101369857 Msa0902670:CDS 55.0%
CCGTGGGATACTGCATTCAC+AGG + chr6_1:101370040-101370059 Msa0902670:CDS 55.0%
GCTTGACCAGGAAACATGGG+TGG + chr6_1:101370211-101370230 Msa0902670:CDS 55.0%
GACTGTCCAGTGTCTGCCAT+CGG - chr6_1:101370377-101370396 None:intergenic 55.0%
GCTTGGGGCTAAAGCAATGC+AGG + chr6_1:101371250-101371269 Msa0902670:three_prime_UTR 55.0%
AGGGGGGGTAACAGTATGAG+GGG - chr6_1:101371920-101371939 None:intergenic 55.0%
GAGGGGGGGTAACAGTATGA+GGG - chr6_1:101371921-101371940 None:intergenic 55.0%
CGCCAGGTGTTTAGAGGTGA+TGG - chr6_1:101372380-101372399 None:intergenic 55.0%
AGACATTGATCGAGTCGCGC+AGG + chr6_1:101372612-101372631 Msa0902670:three_prime_UTR 55.0%
CAGAGCCGCAGAGGTAGTCT+TGG + chr6_1:101364465-101364484 Msa0902670:intron 60.0%
GCAGGCACATTTAGTGCGGG+CGG + chr6_1:101368841-101368860 Msa0902670:intron 60.0%
GGGGGGGTAACAGTATGAGG+GGG - chr6_1:101371919-101371938 None:intergenic 60.0%
GGAGGGGGGGTAACAGTATG+AGG - chr6_1:101371922-101371941 None:intergenic 60.0%
AATGGGGCACGTGGGGTAAG+GGG - chr6_1:101371992-101372011 None:intergenic 60.0%
GAATGGGGCACGTGGGGTAA+GGG - chr6_1:101371993-101372012 None:intergenic 60.0%
AGAATGGGGCACGTGGGGTA+AGG - chr6_1:101371994-101372013 None:intergenic 60.0%
CACCTCTAAACACCTGGCGC+TGG + chr6_1:101372381-101372400 Msa0902670:three_prime_UTR 60.0%
TGCCAGCGCCAGGTGTTTAG+AGG - chr6_1:101372386-101372405 None:intergenic 60.0%
!! TGACTTGACTTGCCAGCGCC+AGG - chr6_1:101372396-101372415 None:intergenic 60.0%
TCTGCGGCTCTGCCACTCCA+AGG - chr6_1:101364457-101364476 None:intergenic 65.0%
TTGGAGTGGCAGAGCCGCAG+AGG + chr6_1:101364456-101364475 Msa0902670:intron 65.0%
GCTCGGCCGATGGCAGACAC+TGG + chr6_1:101370368-101370387 Msa0902670:CDS 70.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 101364124 101373539 101364124 ID=Msa0902670;Name=Msa0902670
chr6_1 mRNA 101364124 101373539 101364124 ID=Msa0902670-mRNA-1;Parent=Msa0902670;Name=Msa0902670-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0.72|0.75|0.91|0.54|0.58|12|1043|372
chr6_1 exon 101364124 101364129 101364124 ID=Msa0902670-mRNA-1:exon:17933;Parent=Msa0902670-mRNA-1
chr6_1 exon 101365163 101365319 101365163 ID=Msa0902670-mRNA-1:exon:17934;Parent=Msa0902670-mRNA-1
chr6_1 exon 101365626 101365714 101365626 ID=Msa0902670-mRNA-1:exon:17935;Parent=Msa0902670-mRNA-1
chr6_1 exon 101368845 101369086 101368845 ID=Msa0902670-mRNA-1:exon:17936;Parent=Msa0902670-mRNA-1
chr6_1 exon 101369779 101369926 101369779 ID=Msa0902670-mRNA-1:exon:17937;Parent=Msa0902670-mRNA-1
chr6_1 exon 101370014 101370097 101370014 ID=Msa0902670-mRNA-1:exon:17938;Parent=Msa0902670-mRNA-1
chr6_1 exon 101370191 101370412 101370191 ID=Msa0902670-mRNA-1:exon:17939;Parent=Msa0902670-mRNA-1
chr6_1 exon 101370422 101370553 101370422 ID=Msa0902670-mRNA-1:exon:17940;Parent=Msa0902670-mRNA-1
chr6_1 exon 101371118 101371271 101371118 ID=Msa0902670-mRNA-1:exon:17941;Parent=Msa0902670-mRNA-1
chr6_1 exon 101372361 101372442 101372361 ID=Msa0902670-mRNA-1:exon:17942;Parent=Msa0902670-mRNA-1
chr6_1 exon 101372554 101372633 101372554 ID=Msa0902670-mRNA-1:exon:17943;Parent=Msa0902670-mRNA-1
chr6_1 exon 101372774 101373539 101372774 ID=Msa0902670-mRNA-1:exon:17944;Parent=Msa0902670-mRNA-1
chr6_1 CDS 101364124 101364129 101364124 ID=Msa0902670-mRNA-1:cds;Parent=Msa0902670-mRNA-1
chr6_1 CDS 101365163 101365319 101365163 ID=Msa0902670-mRNA-1:cds;Parent=Msa0902670-mRNA-1
chr6_1 CDS 101365626 101365714 101365626 ID=Msa0902670-mRNA-1:cds;Parent=Msa0902670-mRNA-1
chr6_1 CDS 101368845 101369086 101368845 ID=Msa0902670-mRNA-1:cds;Parent=Msa0902670-mRNA-1
chr6_1 CDS 101369779 101369926 101369779 ID=Msa0902670-mRNA-1:cds;Parent=Msa0902670-mRNA-1
chr6_1 CDS 101370014 101370097 101370014 ID=Msa0902670-mRNA-1:cds;Parent=Msa0902670-mRNA-1
chr6_1 CDS 101370191 101370412 101370191 ID=Msa0902670-mRNA-1:cds;Parent=Msa0902670-mRNA-1
chr6_1 CDS 101370422 101370553 101370422 ID=Msa0902670-mRNA-1:cds;Parent=Msa0902670-mRNA-1
chr6_1 CDS 101371118 101371156 101371118 ID=Msa0902670-mRNA-1:cds;Parent=Msa0902670-mRNA-1
chr6_1 three_prime_UTR 101371157 101371271 101371157 ID=Msa0902670-mRNA-1:three_prime_utr;Parent=Msa0902670-mRNA-1
chr6_1 three_prime_UTR 101372361 101372442 101372361 ID=Msa0902670-mRNA-1:three_prime_utr;Parent=Msa0902670-mRNA-1
chr6_1 three_prime_UTR 101372554 101372633 101372554 ID=Msa0902670-mRNA-1:three_prime_utr;Parent=Msa0902670-mRNA-1
chr6_1 three_prime_UTR 101372774 101373539 101372774 ID=Msa0902670-mRNA-1:three_prime_utr;Parent=Msa0902670-mRNA-1
Gene Sequence

>Msa0902670

ATGGGAGCTAAACTTCCCTCTGTTCTGAGGATCTATCGAGACACACTGACTGCTGATATGAAGAGTGCTATTAAAACTGCCGTTGCTGAGTTGCTTCCAGTTATTGCTGCTCGAGCTTCAGAATCGGAGTTCTTTTCTGGAGACAGAGCTGTAGAGGCAGATGGTGGTGGTGCTTCACTTGCTAGCAAGTTAAAGAGTCTGTCATCTGATTGCTTTGTCCATCTTTTGAGTGCTGTTTTCATGATTGTACAGGCACATTTAGTGCGGGCGGCTGAAGTGAAAAAAGCCATTGAATGGATTTTGAGCAACTGTGATGGTCATTATGCTTCTGATTCAGTTGCTGCAGCAATTGCGCATGGTGCTGCAGCTGCAGAAATATCCCAAGAAAGTGAGGTTCATGGTACCACATTTTTGCCATATTCACCTCAAAAGAATGTTGCCAAGGGTCCATCTTTTCACGGAAAAGCAATAGATGCTGTGAGCTTCTCAAATATAGCTGATGTATTGCGAGAAAACGCAGAAGCTCATGTAAGATGGGCAAAGCTTCTGGGGGTCCGTGCTACTCTCCATCCTAGGTTGAAACTGCAGGAGTTTCTAACTGTTTACAACATCACCCATGAGTTCATTACAGCTACAGAAAAAATTGGTGGAAGATTGGGATACAACATCCGTGGGATACTGCATTCACAGGCCAAGGCTTTTATTGATTGTCAGCATGATTCTCGGGTGTCAAAAATTATGGCAGTGCTTGACCAGGAAACATGGGTGGAGATAGATGTTCCTGATGAATTTCAATCCATTATCAATACGCTTTTTCCATTGGATGCATTGTCTTCTGGGGACCCTAATGGTGTTGAAGAAGATAATTCAAACAGTTACCATGATTTGGCGACTAACAATGATGCTCGGCCGATGGCAGACACTGGACAGTCAAATGCTGAACAGAATACTGATTCGACCGATGAATCTAAGAAACCAAATAGAGGTCATAGTAAATCGTTAGAGAGTATCAGCACTGAGAAAGATCAGAAAAAATCTGCATCTCAACCTCTTTTCTACAAAGGTGTTGGTTATCACATGTGGCTTGATATTGCTCAAGATATTGTTAGAATACATTGA
Protein sequence

>Msa0902670

MGAKLPSVLRIYRDTLTADMKSAIKTAVAELLPVIAARASESEFFSGDRAVEADGGGASLASKLKSLSSDCFVHLLSAVFMIVQAHLVRAAEVKKAIEWILSNCDGHYASDSVAAAIAHGAAAAEISQESEVHGTTFLPYSPQKNVAKGPSFHGKAIDAVSFSNIADVLRENAEAHVRWAKLLGVRATLHPRLKLQEFLTVYNITHEFITATEKIGGRLGYNIRGILHSQAKAFIDCQHDSRVSKIMAVLDQETWVEIDVPDEFQSIINTLFPLDALSSGDPNGVEEDNSNSYHDLATNNDARPMADTGQSNAEQNTDSTDESKKPNRGHSKSLESISTEKDQKKSASQPLFYKGVGYHMWLDIAQDIVRIH*