AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0903280

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0903280 MtrunA17_Chr7g0255821 32.736 614 335 26 23 580 201 792 7.75e-65 228
Msa0903280 MtrunA17_Chr1g0168031 25.296 676 363 29 26 580 473 1127 9.93e-23 103
Msa0903280 MtrunA17_Chr4g0024921 28.831 385 222 18 245 605 577 933 1.94e-20 96.3
Msa0903280 MtrunA17_Chr2g0320751 22.764 492 302 19 145 580 521 990 1.26e-14 77.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0903280 AT5G05130.1 29.709 653 344 26 17 580 225 851 3.75e-57 207
Msa0903280 AT5G43530.1 24.739 671 387 27 11 580 598 1251 4.57e-21 99.0
Msa0903280 AT1G05120.1 32.231 242 128 12 359 580 579 804 2.88e-19 92.8
Msa0903280 AT1G05120.2 32.231 242 128 12 359 580 622 847 2.94e-19 92.8
Msa0903280 AT3G20010.1 25.965 285 143 12 352 580 744 1016 3.51e-14 76.6
Msa0903280 AT3G20010.5 25.965 285 143 12 352 580 744 1016 3.51e-14 76.6
Msa0903280 AT3G20010.7 25.965 285 143 12 352 580 744 1016 3.51e-14 76.6
Msa0903280 AT3G20010.3 25.795 283 146 11 352 580 478 750 4.70e-14 75.9
Msa0903280 AT3G20010.2 25.795 283 146 11 352 580 453 725 5.72e-14 75.9
Msa0903280 AT2G40770.2 24.260 338 203 10 279 580 1264 1584 9.85e-13 72.0
Msa0903280 AT2G40770.1 24.260 338 203 10 279 580 1264 1584 9.85e-13 72.0
Msa0903280 AT2G40770.3 24.260 338 203 10 279 580 1264 1584 9.85e-13 72.0

Find 142 sgRNAs with CRISPR-Local

Find 278 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTCTCTTGTGAACATGTT+TGG 0.167220 6_2:-388068 Msa0903280:three_prime_UTR
TTTCTCTTGTGAACATGTTT+GGG 0.208944 6_2:-388067 Msa0903280:three_prime_UTR
AATTATCGACGAACATTAAA+TGG 0.213214 6_2:-391779 Msa0903280:CDS
ATAAGTCGGTTGTTCCTAAA+AGG 0.259634 6_2:+390353 None:intergenic
TGCGTCTAATGTCTACTTAA+TGG 0.288767 6_2:-389972 Msa0903280:CDS
TCCGCACAACACGTTACTTC+TGG 0.292776 6_2:+389794 None:intergenic
ATGAAGAACTACCGCCGTTT+TGG 0.312979 6_2:-392139 Msa0903280:CDS
TGCTATTGAGAAATTTAATA+TGG 0.317635 6_2:-390083 Msa0903280:CDS
TAATTCGATGTTATCATTGT+TGG 0.353044 6_2:-390182 Msa0903280:CDS
GAATTAGACGAAGGATAATA+AGG 0.353140 6_2:+391069 None:intergenic
ACAATCTCTCCACCAGTTGC+AGG 0.362141 6_2:-391706 Msa0903280:CDS
GAGAAAGATCGGATCCATTC+AGG 0.366781 6_2:+391730 None:intergenic
CTTCAATGACTGTAAAGCTT+TGG 0.375209 6_2:-392033 Msa0903280:CDS
TGTTCTCGAGATAACGTAGA+AGG 0.377618 6_2:+391135 None:intergenic
TTTCTTTAAATGTGGCTTCT+GGG 0.385362 6_2:+390537 None:intergenic
ATAAGGAGAGACTGTAGGTA+AGG 0.388381 6_2:+391086 None:intergenic
ATCAATTTCATTTGCTTGCA+AGG 0.391349 6_2:+387966 None:intergenic
TCATCAGATTGCATGTTAAA+CGG 0.395781 6_2:+391603 None:intergenic
GCAAGAAAAGGGCTGAGAAA+TGG 0.399492 6_2:-389943 Msa0903280:CDS
TTGGAAACGTTCACGACGTA+AGG 0.402528 6_2:-392120 Msa0903280:CDS
TCAGCTTTCTGGCGAGGAAC+TGG 0.406112 6_2:-391195 Msa0903280:CDS
CAGTGGATCCTCAAACCCTT+AGG 0.409199 6_2:+391882 None:intergenic
CCGCACAACACGTTACTTCT+GGG 0.418368 6_2:+389795 None:intergenic
GTCAGAACAGGTAAGACATT+TGG 0.418623 6_2:+390378 None:intergenic
TAATGGAAGCTTGCAAGAAA+AGG 0.422397 6_2:-389955 Msa0903280:CDS
AATTGTTGAGGAGGAGGAAG+AGG 0.427098 6_2:-391565 Msa0903280:intron
CAAGAAAAGGGCTGAGAAAT+GGG 0.427490 6_2:-389942 Msa0903280:CDS
TCCTAAAAGGGTGTCAGAAC+AGG 0.433413 6_2:+390366 None:intergenic
CGTCGTGAACGTTTCCAAAA+CGG 0.444644 6_2:+392125 None:intergenic
TGTTGTATCAACCATTGAAA+AGG 0.450104 6_2:+389744 None:intergenic
ACGATCTTATGCGGCTTGAT+TGG 0.450379 6_2:-391926 Msa0903280:CDS
ATTTAATATGGCGACGTCAA+TGG 0.452794 6_2:-390071 Msa0903280:CDS
GTTACTTCTGGGCTCACATT+CGG 0.454378 6_2:+389806 None:intergenic
ATCGCATATCAGCCTGCAAC+TGG 0.455568 6_2:+391694 None:intergenic
CATCAGATTGCATGTTAAAC+GGG 0.456069 6_2:+391604 None:intergenic
TTTGCCGATGTCGACCTGAA+TGG 0.458251 6_2:-391744 Msa0903280:CDS
CATCCACCGGACGGGACAAA+AGG 0.461287 6_2:-389909 Msa0903280:CDS
AATGATTCGCAGAACTTTGA+CGG 0.463926 6_2:+389883 None:intergenic
ATAGTTGCCCTAAGGGTTTG+AGG 0.470104 6_2:-391890 Msa0903280:CDS
TGTAATCTTGTATAGCCTGC+AGG 0.473512 6_2:+391035 None:intergenic
AAGTTCGAAAAGCCTCTTGT+CGG 0.478197 6_2:-392206 Msa0903280:CDS
GATGCGTTATGTGCAGTTTG+TGG 0.485154 6_2:-390487 Msa0903280:CDS
AATGGAAGCTTGCAAGAAAA+GGG 0.491625 6_2:-389954 Msa0903280:CDS
TGGTATCTTGCCTCCAATTG+AGG 0.492275 6_2:-391234 Msa0903280:CDS
ATTGAAGATGCCTCCTCTGA+AGG 0.494522 6_2:+392049 None:intergenic
TTCTCTTGTGAACATGTTTG+GGG 0.502146 6_2:-388066 Msa0903280:three_prime_UTR
TTGAAGATGCCTCCTCTGAA+GGG 0.504249 6_2:+392050 None:intergenic
GTATCTTGATAGTTGCCCTA+AGG 0.504349 6_2:-391898 Msa0903280:CDS
TTGTATAGCCTGCAGGGGAG+TGG 0.507572 6_2:+391042 None:intergenic
TTCCATGGTACTTGATTCAT+CGG 0.509123 6_2:-390293 Msa0903280:CDS
TAAGGAGAGACTGTAGGTAA+GGG 0.509372 6_2:+391087 None:intergenic
TATCTTGATAGTTGCCCTAA+GGG 0.509478 6_2:-391897 Msa0903280:CDS
TTTAATCCACATTAATGTGA+AGG 0.510767 6_2:-388144 Msa0903280:three_prime_UTR
ATTCTCAACCACTCCCCTGC+AGG 0.512949 6_2:-391050 Msa0903280:CDS
ATGATTCGCAGAACTTTGAC+GGG 0.514651 6_2:+389884 None:intergenic
CGCAGAACAAAGGTTGATGT+TGG 0.516753 6_2:-391254 Msa0903280:CDS
GAGAAAGAGAAAGCGAAAGT+AGG 0.519398 6_2:+388038 None:intergenic
GGAGAGACTGTAGGTAAGGG+AGG 0.520665 6_2:+391090 None:intergenic
ATGCCTCCTCTGAAGGGGCT+AGG 0.523609 6_2:+392056 None:intergenic
TTAATCCACATTAATGTGAA+GGG 0.524200 6_2:-388143 Msa0903280:three_prime_UTR
TAAGTCGGTTGTTCCTAAAA+GGG 0.524800 6_2:+390354 None:intergenic
GTAATCAAACTATGAACAGT+TGG 0.527859 6_2:+390457 None:intergenic
GCGTAAAATTGTTGAGGAGG+AGG 0.528992 6_2:-391571 Msa0903280:CDS
GTCAAATGCATCCACCGGAC+GGG 0.529042 6_2:-389917 Msa0903280:CDS
CGACGAACATTAAATGGAGG+AGG 0.529173 6_2:-391773 Msa0903280:CDS
AGTGGATCCTCAAACCCTTA+GGG 0.529703 6_2:+391883 None:intergenic
CATAGTTTGATTACAAAGTG+TGG 0.535395 6_2:-390448 Msa0903280:CDS
TTTCTGGCGAGGAACTGGTT+AGG 0.536442 6_2:-391190 Msa0903280:CDS
GAGAGATTGTTGAGAAAGAT+CGG 0.537027 6_2:+391719 None:intergenic
ATCAAAGCTGAAACTGAAAA+CGG 0.540986 6_2:-390019 Msa0903280:CDS
GTAATCTTGTATAGCCTGCA+GGG 0.544057 6_2:+391036 None:intergenic
TGGAAACGTTCACGACGTAA+GGG 0.544869 6_2:-392119 Msa0903280:CDS
ATACTAACAAGAAGAACCAC+TGG 0.545770 6_2:+390040 None:intergenic
TGCTTCTGCACGATCTTATG+CGG 0.550462 6_2:-391935 Msa0903280:CDS
TTGCACTAAATGAAAAGCAC+CGG 0.551848 6_2:-389712 Msa0903280:intron
AGGAGTTGTGGTCCTGACGC+CGG 0.552509 6_2:+391110 None:intergenic
ATCAAACTATGAACAGTTGG+AGG 0.553793 6_2:+390460 None:intergenic
CTTCTCAAGTACACGGCGAT+CGG 0.559122 6_2:+392226 None:intergenic
AGATCGTGCAGAAGCAATGT+TGG 0.559615 6_2:+391942 None:intergenic
ATTGCATGTTAAACGGGTCG+AGG 0.562264 6_2:+391610 None:intergenic
ACGTTATCTCGAGAACAAAC+CGG 0.564021 6_2:-391129 Msa0903280:CDS
AGTTGCAGGCTGATATGCGA+TGG 0.568469 6_2:-391692 Msa0903280:CDS
GACATTTGGAAACGCGTGCA+AGG 0.570108 6_2:+390392 None:intergenic
AATTACATTGCGCAGAACAA+AGG 0.570385 6_2:-391264 Msa0903280:CDS
GCATATCAGCCTGCAACTGG+TGG 0.570912 6_2:+391697 None:intergenic
GGAAACGTTCACGACGTAAG+GGG 0.571076 6_2:-392118 Msa0903280:CDS
TGTAGGTAAGGGAGGAGTTG+TGG 0.571870 6_2:+391098 None:intergenic
TCGTAAGGCTGAGTCTTCCA+TGG 0.572228 6_2:-390308 Msa0903280:CDS
TGTTGTACAACCTCCTCGTA+AGG 0.572321 6_2:-390323 Msa0903280:CDS
ATATCTCAAACATGTAAGTG+TGG 0.577899 6_2:+388248 None:intergenic
AAGCTGAAACTGAAAACGGA+AGG 0.580290 6_2:-390015 Msa0903280:CDS
TCTATGTTGTCTGATGCTCA+TGG 0.583561 6_2:-391997 Msa0903280:CDS
GTTCACCCTTCACATTAATG+TGG 0.585323 6_2:+388138 None:intergenic
GGGTATGTCAACAAGGTTAG+CGG 0.586667 6_2:-392098 Msa0903280:CDS
AATATCGTAACAAAGAAGAT+CGG 0.590061 6_2:-391968 Msa0903280:CDS
TACAAGATTACAAGTTCATG+AGG 0.590425 6_2:-391024 Msa0903280:CDS
TATCTCAAACATGTAAGTGT+GGG 0.591944 6_2:+388249 None:intergenic
GGATCCATTCAGGTCGACAT+CGG 0.595453 6_2:+391740 None:intergenic
AACGAAACGAAATGTTGTCA+AGG 0.598122 6_2:-392268 None:intergenic
TCTCTTGTGAACATGTTTGG+GGG 0.599544 6_2:-388065 Msa0903280:three_prime_UTR
TGTCAAATGCATCCACCGGA+CGG 0.602750 6_2:-389918 Msa0903280:CDS
TCTTCAGCGTAAAATTGTTG+AGG 0.607210 6_2:-391577 Msa0903280:CDS
GGGCTGTCAAATGCATCCAC+CGG 0.607984 6_2:-389922 Msa0903280:CDS
CGGTTACCATGTTGAAGCTG+TGG 0.608610 6_2:-392186 Msa0903280:CDS
TCAGCGTAAAATTGTTGAGG+AGG 0.609573 6_2:-391574 Msa0903280:CDS
TCTACGAGAAATTGATCTTG+TGG 0.609963 6_2:-391826 Msa0903280:CDS
AATGTTGTCAAGGGACGTGA+AGG 0.610165 6_2:-392258 Msa0903280:CDS
ACCATGTTGAAGCTGTGGAA+TGG 0.615303 6_2:-392181 Msa0903280:CDS
TAGCATGCAAGTAACTTACA+TGG 0.616917 6_2:-388105 Msa0903280:three_prime_UTR
CACGCAGCTTATAACATCAG+TGG 0.617183 6_2:-391294 Msa0903280:intron
GGATAATAAGGAGAGACTGT+AGG 0.620753 6_2:+391081 None:intergenic
AAAACTACAGACTTTGTGGT+AGG 0.621272 6_2:+390214 None:intergenic
TGAAGATGCCTCCTCTGAAG+GGG 0.624514 6_2:+392051 None:intergenic
GACGAACATTAAATGGAGGA+GGG 0.628061 6_2:-391772 Msa0903280:CDS
GTCCGATGAATCAAGTACCA+TGG 0.628500 6_2:+390291 None:intergenic
AGCTGAAACTGAAAACGGAA+GGG 0.631666 6_2:-390014 Msa0903280:CDS
ACGAAACGAAATGTTGTCAA+GGG 0.632738 6_2:-392267 None:intergenic
CGACCTAGCCCCTTCAGAGG+AGG 0.633551 6_2:-392059 Msa0903280:CDS
TTTCGAACTTCTCAAGTACA+CGG 0.633759 6_2:+392219 None:intergenic
ATGAGCATCAGACAACATAG+AGG 0.637765 6_2:+391999 None:intergenic
CAGATTTCACAGTAAAACAG+TGG 0.638939 6_2:+391865 None:intergenic
GTTCTCGAGATAACGTAGAA+GGG 0.640463 6_2:+391136 None:intergenic
TGATTCATCGGACACTAACA+AGG 0.641324 6_2:-390281 Msa0903280:CDS
TCCATTCCACAGCTTCAACA+TGG 0.641656 6_2:+392180 None:intergenic
GAACGACCTAGCCCCTTCAG+AGG 0.647009 6_2:-392062 Msa0903280:CDS
TCAACATGGTAACCGACAAG+AGG 0.650573 6_2:+392194 None:intergenic
ATGGAAGACTCAGCCTTACG+AGG 0.660133 6_2:+390310 None:intergenic
TATCGACGAACATTAAATGG+AGG 0.662474 6_2:-391776 Msa0903280:CDS
TACAACATATGAGAATAAGT+CGG 0.664851 6_2:+390339 None:intergenic
AGTGGTTGAGAATTAGACGA+AGG 0.669339 6_2:+391060 None:intergenic
GTTGCAGGCTGATATGCGAT+GGG 0.673289 6_2:-391691 Msa0903280:CDS
TAATCTTGTATAGCCTGCAG+GGG 0.678789 6_2:+391037 None:intergenic
ACGTAAGGGGTATGTCAACA+AGG 0.683656 6_2:-392105 Msa0903280:CDS
TTTCTCAATAGCACTAGCCG+CGG 0.685061 6_2:+390093 None:intergenic
CCCAGAAGTAACGTGTTGTG+CGG 0.693004 6_2:-389795 Msa0903280:CDS
GCTCATCAACATCACAGACA+CGG 0.703967 6_2:+388213 None:intergenic
GAAGACTCAGCCTTACGAGG+AGG 0.718769 6_2:+390313 None:intergenic
GTCAATGGAAGATAAACCAG+TGG 0.724126 6_2:-390056 Msa0903280:CDS
CATTGCAAAGAACACCATCG+AGG 0.734720 6_2:-389864 Msa0903280:CDS
ATGACAAGCAAAGATCACGA+AGG 0.757576 6_2:+391640 None:intergenic
CGTGAACGTTTCCAAAACGG+CGG 0.764789 6_2:+392128 None:intergenic
GAATGGTAGAGATATGACCG+CGG 0.794453 6_2:-390110 Msa0903280:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAAAAGAAAAAAGAAAAAA+AGG + chr6_2:388754-388773 None:intergenic 15.0%
!!! ACACTTTTAAGAAAAAAATA+TGG + chr6_2:391129-391148 None:intergenic 15.0%
!! TATATTAACATGTAAACTAT+AGG + chr6_2:391520-391539 None:intergenic 15.0%
!! TATTTATTAATTGTACATGA+CGG - chr6_2:391830-391849 Msa0903280:CDS 15.0%
!!! TTTTGGCAAAATTACTTAAA+AGG + chr6_2:389330-389349 None:intergenic 20.0%
!!! TCAAACTTTTTCTTTAAATG+TGG + chr6_2:389709-389728 None:intergenic 20.0%
!!! TACACTTTTTGCAATAAATA+TGG + chr6_2:389813-389832 None:intergenic 20.0%
!! TGCTATTGAGAAATTTAATA+TGG - chr6_2:390152-390171 Msa0903280:CDS 20.0%
!! GAAAGATTAAAAGTTGAAAA+AGG + chr6_2:390562-390581 None:intergenic 20.0%
!! AAATATTTCAAGATTAAGAG+GGG + chr6_2:390641-390660 None:intergenic 20.0%
!! CAAATATTTCAAGATTAAGA+GGG + chr6_2:390642-390661 None:intergenic 20.0%
!!! AAATGAAATGAAATTCCTTT+TGG - chr6_2:391708-391727 Msa0903280:CDS 20.0%
!! ATTATGAGAAAAAGTGAAAA+AGG + chr6_2:391767-391786 None:intergenic 20.0%
!! GTCATGTACAATTAATAAAT+AGG + chr6_2:391831-391850 None:intergenic 20.0%
!! ATTTATTAATTGTACATGAC+GGG - chr6_2:391831-391850 Msa0903280:CDS 20.0%
!!! CAATATTGTGTATGATTTTT+AGG - chr6_2:392044-392063 Msa0903280:CDS 20.0%
! AATATCGTAACAAAGAAGAT+CGG - chr6_2:388267-388286 Msa0903280:three_prime_UTR 25.0%
! AATTATCGACGAACATTAAA+TGG - chr6_2:388456-388475 Msa0903280:intron 25.0%
! AAGTAAATGTGCATATAAGA+AGG + chr6_2:388917-388936 None:intergenic 25.0%
!! AAATGATTTTCTACCTCAAT+TGG + chr6_2:389017-389036 None:intergenic 25.0%
!! AATCATTTTATTCAGCTTTC+TGG - chr6_2:389029-389048 Msa0903280:intron 25.0%
!! ACTGCATTTCTTTTTCTTTT+TGG + chr6_2:389347-389366 None:intergenic 25.0%
! AGTATTCCAAATGTATGAAT+AGG - chr6_2:389364-389383 Msa0903280:intron 25.0%
! GTATTCCAAATGTATGAATA+GGG - chr6_2:389365-389384 Msa0903280:intron 25.0%
! TATTCCAAATGTATGAATAG+GGG - chr6_2:389366-389385 Msa0903280:intron 25.0%
!!! ACTTTTAAAACTAAAACCAC+CGG + chr6_2:389523-389542 None:intergenic 25.0%
!!! GGTTTTAGTTTTAAAAGTGA+AGG - chr6_2:389525-389544 Msa0903280:intron 25.0%
!!! TTTTAAAAGTGAAGGAAAGA+TGG - chr6_2:389533-389552 Msa0903280:intron 25.0%
! TCAATGCATGTATATAAAGA+TGG + chr6_2:389572-389591 None:intergenic 25.0%
! TACAACATATGAGAATAAGT+CGG + chr6_2:389899-389918 None:intergenic 25.0%
! TAATTCGATGTTATCATTGT+TGG - chr6_2:390053-390072 Msa0903280:CDS 25.0%
! ATTGTTGGAAAAAACTTTGT+TGG - chr6_2:390068-390087 Msa0903280:CDS 25.0%
! GCAAATATTTCAAGATTAAG+AGG + chr6_2:390643-390662 None:intergenic 25.0%
!! ATCTTGAAATATTTGCTGAT+TGG - chr6_2:390647-390666 Msa0903280:intron 25.0%
!! AAAATACACCTTGTTTCAAA+TGG + chr6_2:390711-390730 None:intergenic 25.0%
! ATAATGTCAGTGTATTCAAA+CGG + chr6_2:390838-390857 None:intergenic 25.0%
! GCATCACTATACAAATAAAT+AGG + chr6_2:391055-391074 None:intergenic 25.0%
! AATGATAGTAATAGCAATAC+TGG + chr6_2:391175-391194 None:intergenic 25.0%
! AGAGATAAATAACATAAGTG+AGG - chr6_2:391349-391368 Msa0903280:intron 25.0%
! AATTATTCGAACAACTTTGA+CGG + chr6_2:391597-391616 None:intergenic 25.0%
!!! CACTAGTATTTTTTCTTCAA+TGG + chr6_2:391630-391649 None:intergenic 25.0%
! AACTTTATTCATCTTCCAAA+AGG + chr6_2:391726-391745 None:intergenic 25.0%
! AGAAAAAGTGAAAAAGGATT+AGG + chr6_2:391761-391780 None:intergenic 25.0%
! TTTAATCCACATTAATGTGA+AGG - chr6_2:392091-392110 Msa0903280:CDS 25.0%
! TTAATCCACATTAATGTGAA+GGG - chr6_2:392092-392111 Msa0903280:CDS 25.0%
!!! TGAAAGTCAACTTTTTTTCG+AGG + chr6_2:388575-388594 None:intergenic 30.0%
TCATCAGATTGCATGTTAAA+CGG + chr6_2:388635-388654 None:intergenic 30.0%
CTTCAGATATAACATGTTCT+TGG - chr6_2:388840-388859 Msa0903280:intron 30.0%
GAATTAGACGAAGGATAATA+AGG + chr6_2:389169-389188 None:intergenic 30.0%
TACAAGATTACAAGTTCATG+AGG - chr6_2:389211-389230 Msa0903280:intron 30.0%
! CTACTAGTCTAGATACATTA+AGG + chr6_2:389300-389319 None:intergenic 30.0%
TAGGGGAACACTAAATTAAA+TGG - chr6_2:389383-389402 Msa0903280:intron 30.0%
AGGGGAACACTAAATTAAAT+GGG - chr6_2:389384-389403 Msa0903280:intron 30.0%
! TGGAGTTTTTGTGGTTTATT+TGG - chr6_2:389438-389457 Msa0903280:intron 30.0%
!!! CTTTTAAAACTAAAACCACC+GGG + chr6_2:389522-389541 None:intergenic 30.0%
ATAAAATCAAATGCCATGCT+TGG + chr6_2:389622-389641 None:intergenic 30.0%
TTTCTTTAAATGTGGCTTCT+GGG + chr6_2:389701-389720 None:intergenic 30.0%
! TTTTCTTTAAATGTGGCTTC+TGG + chr6_2:389702-389721 None:intergenic 30.0%
GTAATCAAACTATGAACAGT+TGG + chr6_2:389781-389800 None:intergenic 30.0%
CATAGTTTGATTACAAAGTG+TGG - chr6_2:389787-389806 Msa0903280:CDS 30.0%
TGAAAAAACTACAGACTTTG+TGG + chr6_2:390028-390047 None:intergenic 30.0%
TTCATATCAAAAAGACACAG+AGG + chr6_2:390108-390127 None:intergenic 30.0%
! CTGTGTCTTTTTGATATGAA+TGG - chr6_2:390108-390127 Msa0903280:CDS 30.0%
ATCAAAGCTGAAACTGAAAA+CGG - chr6_2:390216-390235 Msa0903280:CDS 30.0%
! GAAATGAGTTTCCTTTTCAA+TGG - chr6_2:390480-390499 Msa0903280:CDS 30.0%
TGTTGTATCAACCATTGAAA+AGG + chr6_2:390494-390513 None:intergenic 30.0%
GTAAAAGTGGAAAAAGGATA+AGG + chr6_2:390587-390606 None:intergenic 30.0%
TTCTGAGTAAAAGTGGAAAA+AGG + chr6_2:390593-390612 None:intergenic 30.0%
CAGATAATTCTGAGTAAAAG+TGG + chr6_2:390600-390619 None:intergenic 30.0%
! GTATTTTATGTCAATGAACC+TGG - chr6_2:390724-390743 Msa0903280:intron 30.0%
TCAAACAAGTAAGACAATTC+AGG + chr6_2:390761-390780 None:intergenic 30.0%
TAATGTCAGTGTATTCAAAC+GGG + chr6_2:390837-390856 None:intergenic 30.0%
TGATTGATTAAAGCATGAGA+TGG - chr6_2:390903-390922 Msa0903280:intron 30.0%
AGCTGGTTATTAATTAAGAC+TGG - chr6_2:390957-390976 Msa0903280:intron 30.0%
GCTGGTTATTAATTAAGACT+GGG - chr6_2:390958-390977 Msa0903280:intron 30.0%
CTGGTTATTAATTAAGACTG+GGG - chr6_2:390959-390978 Msa0903280:intron 30.0%
AATAACATAAGTGAGGAAAG+TGG - chr6_2:391356-391375 Msa0903280:intron 30.0%
ATTATTCGAACAACTTTGAC+GGG + chr6_2:391596-391615 None:intergenic 30.0%
AAAGTGAAAAAGGATTAGGA+AGG + chr6_2:391757-391776 None:intergenic 30.0%
CAGAATAAGTAAATGAGGAA+AGG + chr6_2:391910-391929 None:intergenic 30.0%
GAAGTCAGAATAAGTAAATG+AGG + chr6_2:391915-391934 None:intergenic 30.0%
! CTTCTTTTATTACCTGCAAA+GGG + chr6_2:391963-391982 None:intergenic 30.0%
TATCTCAAACATGTAAGTGT+GGG + chr6_2:391989-392008 None:intergenic 30.0%
ATATCTCAAACATGTAAGTG+TGG + chr6_2:391990-392009 None:intergenic 30.0%
TTTCTCTTGTGAACATGTTT+GGG - chr6_2:391488-391507 Msa0903280:intron 30.0%
TTTCGAACTTCTCAAGTACA+CGG + chr6_2:388019-388038 None:intergenic 35.0%
CTTCAATGACTGTAAAGCTT+TGG - chr6_2:388202-388221 Msa0903280:three_prime_UTR 35.0%
! TATCTTGATAGTTGCCCTAA+GGG - chr6_2:388338-388357 Msa0903280:intron 35.0%
CAGATTTCACAGTAAAACAG+TGG + chr6_2:388373-388392 None:intergenic 35.0%
TCTACGAGAAATTGATCTTG+TGG - chr6_2:388409-388428 Msa0903280:intron 35.0%
TATCGACGAACATTAAATGG+AGG - chr6_2:388459-388478 Msa0903280:intron 35.0%
GAGAGATTGTTGAGAAAGAT+CGG + chr6_2:388519-388538 None:intergenic 35.0%
CATCAGATTGCATGTTAAAC+GGG + chr6_2:388634-388653 None:intergenic 35.0%
TCTTCAGCGTAAAATTGTTG+AGG - chr6_2:388658-388677 Msa0903280:intron 35.0%
! TCATGATTGCATTTTTCTGC+TGG - chr6_2:388771-388790 Msa0903280:intron 35.0%
!!! CTTGGCTTTTTAGTTGCTAT+TGG - chr6_2:388858-388877 Msa0903280:intron 35.0%
AATTACATTGCGCAGAACAA+AGG - chr6_2:388971-388990 Msa0903280:intron 35.0%
! TGATTTTCTACCTCAATTGG+AGG + chr6_2:389014-389033 None:intergenic 35.0%
! CAAGTTCATGAGGATTTTGA+AGG - chr6_2:389221-389240 Msa0903280:intron 35.0%
CTAGATACATTAAGGAACCT+GGG + chr6_2:389292-389311 None:intergenic 35.0%
TCTAGATACATTAAGGAACC+TGG + chr6_2:389293-389312 None:intergenic 35.0%
TGTTCCCCTATTCATACATT+TGG + chr6_2:389373-389392 None:intergenic 35.0%
!! CAACAGTAACAGATTTTTGG+AGG + chr6_2:389420-389439 None:intergenic 35.0%
CTCCAAAAATCTGTTACTGT+TGG - chr6_2:389418-389437 Msa0903280:intron 35.0%
! CTCCAACAGTAACAGATTTT+TGG + chr6_2:389423-389442 None:intergenic 35.0%
! TGTTACTGTTGGAGTTTTTG+TGG - chr6_2:389429-389448 Msa0903280:intron 35.0%
! ACAAGAGATACAAGTTGACA+TGG + chr6_2:389470-389489 None:intergenic 35.0%
! CTCTTGTTTGTTTACACTTG+TGG - chr6_2:389483-389502 Msa0903280:intron 35.0%
ATAATGTCTATCACCAAGCA+TGG - chr6_2:389606-389625 Msa0903280:intron 35.0%
ATCAAACTATGAACAGTTGG+AGG + chr6_2:389778-389797 None:intergenic 35.0%
TAAGTCGGTTGTTCCTAAAA+GGG + chr6_2:389884-389903 None:intergenic 35.0%
ATAAGTCGGTTGTTCCTAAA+AGG + chr6_2:389885-389904 None:intergenic 35.0%
TTCCATGGTACTTGATTCAT+CGG - chr6_2:389942-389961 Msa0903280:CDS 35.0%
AAAACTACAGACTTTGTGGT+AGG + chr6_2:390024-390043 None:intergenic 35.0%
GTTGGAAAAAACTTTGTTGG+AGG - chr6_2:390071-390090 Msa0903280:CDS 35.0%
ATTTAATATGGCGACGTCAA+TGG - chr6_2:390164-390183 Msa0903280:CDS 35.0%
ATACTAACAAGAAGAACCAC+TGG + chr6_2:390198-390217 None:intergenic 35.0%
TGCGTCTAATGTCTACTTAA+TGG - chr6_2:390263-390282 Msa0903280:CDS 35.0%
TAATGGAAGCTTGCAAGAAA+AGG - chr6_2:390280-390299 Msa0903280:CDS 35.0%
AATGGAAGCTTGCAAGAAAA+GGG - chr6_2:390281-390300 Msa0903280:CDS 35.0%
AATGATTCGCAGAACTTTGA+CGG + chr6_2:390355-390374 None:intergenic 35.0%
!!! CTCTAGTATTTTTTCCTCGA+TGG + chr6_2:390388-390407 None:intergenic 35.0%
! TTGCACTAAATGAAAAGCAC+CGG - chr6_2:390523-390542 Msa0903280:CDS 35.0%
! AAAAGGAATTTGCTCCATAC+CGG + chr6_2:390545-390564 None:intergenic 35.0%
GAATTATCTGCACTGAATGT+TGG - chr6_2:390610-390629 Msa0903280:intron 35.0%
! AGCAATCTTTCTAGAAAGTG+TGG + chr6_2:390688-390707 None:intergenic 35.0%
! AGATTGCTCCATTTGAAACA+AGG - chr6_2:390700-390719 Msa0903280:intron 35.0%
CTTGAGGTTTATGTATTAGC+TGG - chr6_2:390940-390959 Msa0903280:intron 35.0%
TAATAGCAATACTGGACTTG+AGG + chr6_2:391167-391186 None:intergenic 35.0%
CCAATGATGGTAGAATAGTT+GGG + chr6_2:391218-391237 None:intergenic 35.0%
ACCAATGATGGTAGAATAGT+TGG + chr6_2:391219-391238 None:intergenic 35.0%
ACTATTCTACCATCATTGGT+TGG - chr6_2:391219-391238 Msa0903280:CDS 35.0%
! CTATTCTACCATCATTGGTT+GGG - chr6_2:391220-391239 Msa0903280:CDS 35.0%
GTGAACTTTGTGTTGAAAGT+TGG - chr6_2:391259-391278 Msa0903280:CDS 35.0%
!! GGAGAAGAGTACATTTTTGT+CGG - chr6_2:391280-391299 Msa0903280:CDS 35.0%
ATTGATAAATGCTGTGGAAG+CGG - chr6_2:391304-391323 Msa0903280:intron 35.0%
ACATTGTTCTATTGCCTACA+CGG - chr6_2:391449-391468 Msa0903280:intron 35.0%
TTCTCTTGTGAACATGTTTG+AGG - chr6_2:391489-391508 Msa0903280:intron 35.0%
TCTCTTGTGAACATGTTTGA+GGG - chr6_2:391490-391509 Msa0903280:intron 35.0%
GTTTCATCTTTCACTGATGT+CGG - chr6_2:391871-391890 Msa0903280:CDS 35.0%
TTTCATCTTTCACTGATGTC+GGG - chr6_2:391872-391891 Msa0903280:CDS 35.0%
! GCTTCTTTTATTACCTGCAA+AGG + chr6_2:391964-391983 None:intergenic 35.0%
TAGCATGCAAGTAACTTACA+TGG - chr6_2:392130-392149 Msa0903280:CDS 35.0%
CTTTCTCTTGTGAACATGTT+TGG - chr6_2:391487-391506 Msa0903280:intron 35.0%
TTCTCTTGTGAACATGTTTG+GGG - chr6_2:391489-391508 Msa0903280:intron 35.0%
AAGTTCGAAAAGCCTCTTGT+CGG - chr6_2:388029-388048 Msa0903280:three_prime_UTR 40.0%
ATGAGCATCAGACAACATAG+AGG + chr6_2:388239-388258 None:intergenic 40.0%
TCTATGTTGTCTGATGCTCA+TGG - chr6_2:388238-388257 Msa0903280:three_prime_UTR 40.0%
! GTATCTTGATAGTTGCCCTA+AGG - chr6_2:388337-388356 Msa0903280:intron 40.0%
GACGAACATTAAATGGAGGA+GGG - chr6_2:388463-388482 Msa0903280:intron 40.0%
ATGACAAGCAAAGATCACGA+AGG + chr6_2:388598-388617 None:intergenic 40.0%
TCAGCGTAAAATTGTTGAGG+AGG - chr6_2:388661-388680 Msa0903280:intron 40.0%
!!! TTTTCTGCTGGTTGATGAAG+AGG - chr6_2:388783-388802 Msa0903280:intron 40.0%
! GAAGCATACATGAGTTGAAG+AGG + chr6_2:388824-388843 None:intergenic 40.0%
!! TTTTATTCAGCTTTCTGGCG+AGG - chr6_2:389034-389053 Msa0903280:intron 40.0%
GTTCTCGAGATAACGTAGAA+GGG + chr6_2:389102-389121 None:intergenic 40.0%
TGTTCTCGAGATAACGTAGA+AGG + chr6_2:389103-389122 None:intergenic 40.0%
ACGTTATCTCGAGAACAAAC+CGG - chr6_2:389106-389125 Msa0903280:intron 40.0%
TAAGGAGAGACTGTAGGTAA+GGG + chr6_2:389151-389170 None:intergenic 40.0%
ATAAGGAGAGACTGTAGGTA+AGG + chr6_2:389152-389171 None:intergenic 40.0%
GGATAATAAGGAGAGACTGT+AGG + chr6_2:389157-389176 None:intergenic 40.0%
AGTGGTTGAGAATTAGACGA+AGG + chr6_2:389178-389197 None:intergenic 40.0%
TAATCTTGTATAGCCTGCAG+GGG + chr6_2:389201-389220 None:intergenic 40.0%
GTAATCTTGTATAGCCTGCA+GGG + chr6_2:389202-389221 None:intergenic 40.0%
TGTAATCTTGTATAGCCTGC+AGG + chr6_2:389203-389222 None:intergenic 40.0%
!! ATAATTTGCACCCTTTTCCC+AGG - chr6_2:389272-389291 Msa0903280:intron 40.0%
CATTAAGGAACCTGGGAAAA+GGG + chr6_2:389285-389304 None:intergenic 40.0%
ACATTAAGGAACCTGGGAAA+AGG + chr6_2:389286-389305 None:intergenic 40.0%
GTCAGAACAGGTAAGACATT+TGG + chr6_2:389860-389879 None:intergenic 40.0%
TGATTCATCGGACACTAACA+AGG - chr6_2:389954-389973 Msa0903280:CDS 40.0%
GAAAAAACTTTGTTGGAGGC+AGG - chr6_2:390075-390094 Msa0903280:CDS 40.0%
GTCAATGGAAGATAAACCAG+TGG - chr6_2:390179-390198 Msa0903280:CDS 40.0%
AAGCTGAAACTGAAAACGGA+AGG - chr6_2:390220-390239 Msa0903280:CDS 40.0%
AGCTGAAACTGAAAACGGAA+GGG - chr6_2:390221-390240 Msa0903280:CDS 40.0%
CAAGAAAAGGGCTGAGAAAT+GGG - chr6_2:390293-390312 Msa0903280:CDS 40.0%
ATGATTCGCAGAACTTTGAC+GGG + chr6_2:390354-390373 None:intergenic 40.0%
!! CTAAATGAAAAGCACCGGTA+TGG - chr6_2:390528-390547 Msa0903280:CDS 40.0%
TGTCAATGAACCTGGAAAAC+TGG - chr6_2:390732-390751 Msa0903280:intron 40.0%
GTCAATGAACCTGGAAAACT+GGG - chr6_2:390733-390752 Msa0903280:intron 40.0%
TCAATGAACCTGGAAAACTG+GGG - chr6_2:390734-390753 Msa0903280:intron 40.0%
CCCAACTATTCTACCATCAT+TGG - chr6_2:391215-391234 Msa0903280:CDS 40.0%
AAAGAAAGAAACTGCCGTGT+AGG + chr6_2:391466-391485 None:intergenic 40.0%
GCACTTGACATCTTTGATAG+AGG + chr6_2:391549-391568 None:intergenic 40.0%
! GGGAAAGAGTGCGAAATATT+AGG + chr6_2:391943-391962 None:intergenic 40.0%
GTTCACCCTTCACATTAATG+TGG + chr6_2:392100-392119 None:intergenic 40.0%
TCTCTTGTGAACATGTTTGG+GGG - chr6_2:392170-392189 Msa0903280:CDS 40.0%
GAGAAAGAGAAAGCGAAAGT+AGG + chr6_2:392200-392219 None:intergenic 40.0%
TCAACATGGTAACCGACAAG+AGG + chr6_2:388044-388063 None:intergenic 45.0%
ACCATGTTGAAGCTGTGGAA+TGG - chr6_2:388054-388073 Msa0903280:three_prime_UTR 45.0%
TCCATTCCACAGCTTCAACA+TGG + chr6_2:388058-388077 None:intergenic 45.0%
! ATGAAGAACTACCGCCGTTT+TGG - chr6_2:388096-388115 Msa0903280:three_prime_UTR 45.0%
CGTCGTGAACGTTTCCAAAA+CGG + chr6_2:388113-388132 None:intergenic 45.0%
TTGGAAACGTTCACGACGTA+AGG - chr6_2:388115-388134 Msa0903280:three_prime_UTR 45.0%
TGGAAACGTTCACGACGTAA+GGG - chr6_2:388116-388135 Msa0903280:three_prime_UTR 45.0%
! ACGTAAGGGGTATGTCAACA+AGG - chr6_2:388130-388149 Msa0903280:three_prime_UTR 45.0%
GGGTATGTCAACAAGGTTAG+CGG - chr6_2:388137-388156 Msa0903280:three_prime_UTR 45.0%
TTGAAGATGCCTCCTCTGAA+GGG + chr6_2:388188-388207 None:intergenic 45.0%
ATTGAAGATGCCTCCTCTGA+AGG + chr6_2:388189-388208 None:intergenic 45.0%
AGATCGTGCAGAAGCAATGT+TGG + chr6_2:388296-388315 None:intergenic 45.0%
TGCTTCTGCACGATCTTATG+CGG - chr6_2:388300-388319 Msa0903280:intron 45.0%
ACGATCTTATGCGGCTTGAT+TGG - chr6_2:388309-388328 Msa0903280:intron 45.0%
ATAGTTGCCCTAAGGGTTTG+AGG - chr6_2:388345-388364 Msa0903280:intron 45.0%
AGTGGATCCTCAAACCCTTA+GGG + chr6_2:388355-388374 None:intergenic 45.0%
CGACGAACATTAAATGGAGG+AGG - chr6_2:388462-388481 Msa0903280:intron 45.0%
GAGAAAGATCGGATCCATTC+AGG + chr6_2:388508-388527 None:intergenic 45.0%
ATTGCATGTTAAACGGGTCG+AGG + chr6_2:388628-388647 None:intergenic 45.0%
GCGTAAAATTGTTGAGGAGG+AGG - chr6_2:388664-388683 Msa0903280:intron 45.0%
AATTGTTGAGGAGGAGGAAG+AGG - chr6_2:388670-388689 Msa0903280:intron 45.0%
!! TGCTGGTTGATGAAGAGGAT+AGG - chr6_2:388788-388807 Msa0903280:intron 45.0%
CACGCAGCTTATAACATCAG+TGG - chr6_2:388941-388960 Msa0903280:intron 45.0%
!! CGCAGAACAAAGGTTGATGT+TGG - chr6_2:388981-389000 Msa0903280:intron 45.0%
TGGTATCTTGCCTCCAATTG+AGG - chr6_2:389001-389020 Msa0903280:intron 45.0%
GATGCGTTATGTGCAGTTTG+TGG - chr6_2:389748-389767 Msa0903280:exon 45.0%
! ACCTGTTCTGACACCCTTTT+AGG - chr6_2:389868-389887 Msa0903280:CDS 45.0%
!! TCCTAAAAGGGTGTCAGAAC+AGG + chr6_2:389872-389891 None:intergenic 45.0%
TGTTGTACAACCTCCTCGTA+AGG - chr6_2:389912-389931 Msa0903280:CDS 45.0%
GTCCGATGAATCAAGTACCA+TGG + chr6_2:389947-389966 None:intergenic 45.0%
GAATGGTAGAGATATGACCG+CGG - chr6_2:390125-390144 Msa0903280:CDS 45.0%
TTTCTCAATAGCACTAGCCG+CGG + chr6_2:390145-390164 None:intergenic 45.0%
GCAAGAAAAGGGCTGAGAAA+TGG - chr6_2:390292-390311 Msa0903280:CDS 45.0%
CATTGCAAAGAACACCATCG+AGG - chr6_2:390371-390390 Msa0903280:CDS 45.0%
GTTACTTCTGGGCTCACATT+CGG + chr6_2:390432-390451 None:intergenic 45.0%
GGTTGTTATCACGAGTCTTG+AGG - chr6_2:390924-390943 Msa0903280:intron 45.0%
! ACCATCATTGGTTGGGATTG+TGG - chr6_2:391227-391246 Msa0903280:CDS 45.0%
!! GTCGGCATTGATAAATGCTG+TGG - chr6_2:391298-391317 Msa0903280:intron 45.0%
CATCGCGACAGATGTGTTAT+GGG + chr6_2:391415-391434 None:intergenic 45.0%
AAGATGTCAAGTGCATCCAC+CGG - chr6_2:391555-391574 Msa0903280:intron 45.0%
CTGCATGAGAAGAGAACAGA+GGG - chr6_2:391650-391669 Msa0903280:CDS 45.0%
GCTCATCAACATCACAGACA+CGG + chr6_2:392025-392044 None:intergenic 45.0%
CTTCTCAAGTACACGGCGAT+CGG + chr6_2:388012-388031 None:intergenic 50.0%
CGGTTACCATGTTGAAGCTG+TGG - chr6_2:388049-388068 Msa0903280:three_prime_UTR 50.0%
CGTGAACGTTTCCAAAACGG+CGG + chr6_2:388110-388129 None:intergenic 50.0%
GGAAACGTTCACGACGTAAG+GGG - chr6_2:388117-388136 Msa0903280:three_prime_UTR 50.0%
! TGAAGATGCCTCCTCTGAAG+GGG + chr6_2:388187-388206 None:intergenic 50.0%
CAGTGGATCCTCAAACCCTT+AGG + chr6_2:388356-388375 None:intergenic 50.0%
TTTGCCGATGTCGACCTGAA+TGG - chr6_2:388491-388510 Msa0903280:intron 50.0%
GGATCCATTCAGGTCGACAT+CGG + chr6_2:388498-388517 None:intergenic 50.0%
ACAATCTCTCCACCAGTTGC+AGG - chr6_2:388529-388548 Msa0903280:intron 50.0%
ATCGCATATCAGCCTGCAAC+TGG + chr6_2:388544-388563 None:intergenic 50.0%
AGTTGCAGGCTGATATGCGA+TGG - chr6_2:388543-388562 Msa0903280:intron 50.0%
GTTGCAGGCTGATATGCGAT+GGG - chr6_2:388544-388563 Msa0903280:intron 50.0%
! TTTCTGGCGAGGAACTGGTT+AGG - chr6_2:389045-389064 Msa0903280:intron 50.0%
TGTAGGTAAGGGAGGAGTTG+TGG + chr6_2:389140-389159 None:intergenic 50.0%
TGTGGTTGAGAAGCTCTACC+CGG - chr6_2:389501-389520 Msa0903280:intron 50.0%
GACATTTGGAAACGCGTGCA+AGG + chr6_2:389846-389865 None:intergenic 50.0%
ATGGAAGACTCAGCCTTACG+AGG + chr6_2:389928-389947 None:intergenic 50.0%
TCGTAAGGCTGAGTCTTCCA+TGG - chr6_2:389927-389946 Msa0903280:CDS 50.0%
TGTCAAATGCATCCACCGGA+CGG - chr6_2:390317-390336 Msa0903280:CDS 50.0%
CCGCACAACACGTTACTTCT+GGG + chr6_2:390443-390462 None:intergenic 50.0%
CCCAGAAGTAACGTGTTGTG+CGG - chr6_2:390440-390459 Msa0903280:CDS 50.0%
TCCGCACAACACGTTACTTC+TGG + chr6_2:390444-390463 None:intergenic 50.0%
! ATTCAGGTCCCCAGTTTTCC+AGG + chr6_2:390745-390764 None:intergenic 50.0%
GCCACAATCCCAACCAATGA+TGG + chr6_2:391231-391250 None:intergenic 50.0%
AAATGCTGTGGAAGCGGTGA+AGG - chr6_2:391310-391329 Msa0903280:intron 50.0%
GCATCGCGACAGATGTGTTA+TGG + chr6_2:391416-391435 None:intergenic 50.0%
GCTGCATGAGAAGAGAACAG+AGG - chr6_2:391649-391668 Msa0903280:CDS 50.0%
TTCGCACTCTTTCCCTTTGC+AGG - chr6_2:391948-391967 Msa0903280:CDS 50.0%
GCATATCAGCCTGCAACTGG+TGG + chr6_2:388541-388560 None:intergenic 55.0%
! TCAGCTTTCTGGCGAGGAAC+TGG - chr6_2:389040-389059 Msa0903280:intron 55.0%
GGAGAGACTGTAGGTAAGGG+AGG + chr6_2:389148-389167 None:intergenic 55.0%
ATTCTCAACCACTCCCCTGC+AGG - chr6_2:389185-389204 Msa0903280:intron 55.0%
TTGTATAGCCTGCAGGGGAG+TGG + chr6_2:389196-389215 None:intergenic 55.0%
GAAGACTCAGCCTTACGAGG+AGG + chr6_2:389925-389944 None:intergenic 55.0%
GGGCTGTCAAATGCATCCAC+CGG - chr6_2:390313-390332 Msa0903280:CDS 55.0%
GTCAAATGCATCCACCGGAC+GGG - chr6_2:390318-390337 Msa0903280:CDS 55.0%
CATCCACCGGACAGCACAAA+TGG - chr6_2:391568-391587 Msa0903280:CDS 55.0%
GTTCCATTTGTGCTGTCCGG+TGG + chr6_2:391574-391593 None:intergenic 55.0%
CGGGTTCCATTTGTGCTGTC+CGG + chr6_2:391577-391596 None:intergenic 55.0%
ACAGAGGGCTCAACTGTGAG+TGG - chr6_2:391665-391684 Msa0903280:CDS 55.0%
GAACGACCTAGCCCCTTCAG+AGG - chr6_2:388173-388192 Msa0903280:three_prime_UTR 60.0%
! ATGCCTCCTCTGAAGGGGCT+AGG + chr6_2:388182-388201 None:intergenic 60.0%
CTCGAGAACAAACCGGCGTC+AGG - chr6_2:389113-389132 Msa0903280:intron 60.0%
AGGAGTTGTGGTCCTGACGC+CGG + chr6_2:389128-389147 None:intergenic 60.0%
GGTTGAGAAGCTCTACCCGG+TGG - chr6_2:389504-389523 Msa0903280:intron 60.0%
CATCCACCGGACGGGACAAA+AGG - chr6_2:390326-390345 Msa0903280:CDS 60.0%
! GTTCCTTTTGTCCCGTCCGG+TGG + chr6_2:390332-390351 None:intergenic 60.0%
! CGGGTTCCTTTTGTCCCGTC+CGG + chr6_2:390335-390354 None:intergenic 60.0%
CGACCTAGCCCCTTCAGAGG+AGG - chr6_2:388176-388195 Msa0903280:three_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr6_2 gene 387978 392279 387978 ID=Msa0903280;Name=Msa0903280
chr6_2 mRNA 387978 392279 387978 ID=Msa0903280-mRNA-1;Parent=Msa0903280;Name=Msa0903280-mRNA-1;_AED=0.26;_eAED=0.26;_QI=0|1|0.75|1|0.66|0.5|4|348|607
chr6_2 exon 387978 388287 387978 ID=Msa0903280-mRNA-1:exon:248;Parent=Msa0903280-mRNA-1
chr6_2 exon 389713 390565 389713 ID=Msa0903280-mRNA-1:exon:247;Parent=Msa0903280-mRNA-1
chr6_2 exon 391015 391309 391015 ID=Msa0903280-mRNA-1:exon:246;Parent=Msa0903280-mRNA-1
chr6_2 exon 391566 392279 391566 ID=Msa0903280-mRNA-1:exon:245;Parent=Msa0903280-mRNA-1
chr6_2 CDS 391566 392279 391566 ID=Msa0903280-mRNA-1:cds;Parent=Msa0903280-mRNA-1
chr6_2 CDS 391015 391309 391015 ID=Msa0903280-mRNA-1:cds;Parent=Msa0903280-mRNA-1
chr6_2 CDS 389751 390565 389751 ID=Msa0903280-mRNA-1:cds;Parent=Msa0903280-mRNA-1
chr6_2 three_prime_UTR 389713 389750 389713 ID=Msa0903280-mRNA-1:three_prime_utr;Parent=Msa0903280-mRNA-1
chr6_2 three_prime_UTR 387978 388287 387978 ID=Msa0903280-mRNA-1:three_prime_utr;Parent=Msa0903280-mRNA-1
Gene Sequence

>Msa0903280

ATGTTGTCAAGGGACGTGAAGGAAATTATCGCCGATCGCCGTGTACTTGAGAAGTTCGAAAAGCCTCTTGTCGGTTACCATGTTGAAGCTGTGGAATGGATGTTGATCAGAGAGCAGAATGAAGAACTACCGCCGTTTTGGAAACGTTCACGACGTAAGGGGTATGTCAACAAGGTTAGCGGTAAGTACTCAAACGAACGACCTAGCCCCTTCAGAGGAGGCATCTTCAATGACTGTAAAGCTTTGGATATGATAAAACCTCTATGTTGTCTGATGCTCATGGATAATAAATATCGTAACAAAGAAGATCGGAAACCAACATTGCTTCTGCACGATCTTATGCGGCTTGATTGGCTAGAGTATCTTGATAGTTGCCCTAAGGGTTTGAGGATCCACTGTTTTACTGTGAAATCTGACTTCAAATCTGTAGATCTACGAGAAATTGATCTTGTGGTAGTGAGTTATGAACGTCTCAATAAATTATCGACGAACATTAAATGGAGGAGGGTCATTTTTGCCGATGTCGACCTGAATGGATCCGATCTTTCTCAACAATCTCTCCACCAGTTGCAGGCTGATATGCGATGGGTTGTTCCTCGAAAAAAAGTTGACTTTCACCTTCGTGATCTTTGCTTGTCATTGTTGAACCTCGACCCGTTTAACATGCAATCTGATGATCGTCTTCAGCGTAAAATTGTTGAGGAGGAGGAAGAGCTTATAACATCAGTGGCAGAATCAATTACATTGCGCAGAACAAAGGTTGATGTTGGTATCTTGCCTCCAATTGAGGTAGAAAATCATTTTATTCAGCTTTCTGGCGAGGAACTGGTTAGGTATGAAATGACAAAAGACGAAGCTGATGTGACCCTTCTACGTTATCTCGAGAACAAACCGGCGTCAGGACCACAACTCCTCCCTTACCTACAGTCTCTCCTTATTATCCTTCGTCTAATTCTCAACCACTCCCCTGCAGGCTATACAAGATTACAAGTTCATGAGGATTTTGAAGACGTTTCCCAGAAGCCACATTTAAAGAAAAAGTTTGATGATGCGCTGCAAGCAAAAGATGCGTTATGTGCAGTTTGTGGAGAGCCTCCAACTGTTCATAGTTTGATTACAAAGTGTGGCCATATTTATTGCAAAAAGTGTATCAAGAGATACCTTGCACGCGTTTCCAAATGTCTTACCTGTTCTGACACCCTTTTAGGAACAACCGACTTATTCTCATATGTTGTACAACCTCCTCGTAAGGCTGAGTCTTCCATGGTACTTGATTCATCGGACACTAACAAGGTGAAATTGTTGTTGAAGCTTCTAAAAGAACAGAAATCTAAAACACCTACCACAAAGTCTGTAGTTTTTTCACAGTTTAATTCGATGTTATCATTGTTGGAAAAAACTTTGTTGGAGGCAGGTTTCATACCTCTGTGTCTTTTTGATATGAATGGTAGAGATATGACCGCGGCTAGTGCTATTGAGAAATTTAATATGGCGACGTCAATGGAAGATAAACCAGTGGTTCTTCTTGTTAGTATCAAAGCTGAAACTGAAAACGGAAGGGAAAAGTTTGACTTGAAAACTGCGTCTAATGTCTACTTAATGGAAGCTTGCAAGAAAAGGGCTGAGAAATGGGCTGTCAAATGCATCCACCGGACGGGACAAAAGGAACCCGTCAAAGTTCTGCGAATCATTGCAAAGAACACCATCGAGGAAAAAATACTAGAGCTACATGAAAAGAGAATAGAGCCGAATGTGAGCCCAGAAGTAACGTGTTGTGCGGATGCTATTGATGTGAATGAAATGAGTTTCCTTTTCAATGGTTGA
Protein sequence

>Msa0903280

MLSRDVKEIIADRRVLEKFEKPLVGYHVEAVEWMLIREQNEELPPFWKRSRRKGYVNKVSGKYSNERPSPFRGGIFNDCKALDMIKPLCCLMLMDNKYRNKEDRKPTLLLHDLMRLDWLEYLDSCPKGLRIHCFTVKSDFKSVDLREIDLVVVSYERLNKLSTNIKWRRVIFADVDLNGSDLSQQSLHQLQADMRWVVPRKKVDFHLRDLCLSLLNLDPFNMQSDDRLQRKIVEEEEELITSVAESITLRRTKVDVGILPPIEVENHFIQLSGEELVRYEMTKDEADVTLLRYLENKPASGPQLLPYLQSLLIILRLILNHSPAGYTRLQVHEDFEDVSQKPHLKKKFDDALQAKDALCAVCGEPPTVHSLITKCGHIYCKKCIKRYLARVSKCLTCSDTLLGTTDLFSYVVQPPRKAESSMVLDSSDTNKVKLLLKLLKEQKSKTPTTKSVVFSQFNSMLSLLEKTLLEAGFIPLCLFDMNGRDMTAASAIEKFNMATSMEDKPVVLLVSIKAETENGREKFDLKTASNVYLMEACKKRAEKWAVKCIHRTGQKEPVKVLRIIAKNTIEEKILELHEKRIEPNVSPEVTCCADAIDVNEMSFLFNG*