AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0910870

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0910870 MtrunA17_Chr6g0472421 93.548 341 22 0 1 341 1 341 0.0 575
Msa0910870 MtrunA17_Chr1g0203601 55.072 345 107 10 1 340 1 302 2.39e-106 313
Msa0910870 MtrunA17_Chr5g0397881 47.826 322 103 8 7 286 5 303 5.39e-83 256
Msa0910870 MtrunA17_Chr3g0134031 44.954 218 104 3 23 227 14 228 2.83e-58 192
Msa0910870 MtrunA17_Chr5g0441531 38.290 269 127 6 23 286 15 249 1.16e-53 177
Msa0910870 MtrunA17_Chr5g0402291 45.872 218 80 3 26 230 2 194 1.21e-51 172
Msa0910870 MtrunA17_Chr7g0257331 43.000 200 78 2 27 226 16 179 1.22e-44 152
Msa0910870 MtrunA17_Chr6g0467041 52.459 122 58 0 32 153 21 142 1.68e-42 150
Msa0910870 MtrunA17_Chr5g0410881 61.111 108 42 0 17 124 16 123 7.16e-42 152
Msa0910870 MtrunA17_Chr7g0260331 51.220 123 59 1 3 124 18 140 1.35e-40 145
Msa0910870 MtrunA17_Chr8g0378061 57.143 112 48 0 34 145 23 134 1.51e-39 145
Msa0910870 MtrunA17_Chr1g0185131 59.223 103 38 1 31 133 30 128 4.65e-39 141
Msa0910870 MtrunA17_Chr8g0375041 34.643 280 137 8 26 297 2 243 9.98e-39 138
Msa0910870 MtrunA17_Chr4g0039891 65.217 92 32 0 33 124 12 103 1.78e-38 142
Msa0910870 MtrunA17_Chr1g0204741 60.204 98 39 0 31 128 38 135 3.00e-37 136
Msa0910870 MtrunA17_Chr8g0379701 58.252 103 42 1 26 128 6 107 7.33e-37 137
Msa0910870 MtrunA17_Chr4g0047421 34.634 205 96 4 31 231 31 201 6.66e-36 129
Msa0910870 MtrunA17_Chr2g0330821 50.435 115 57 0 31 145 77 191 3.85e-35 131
Msa0910870 MtrunA17_Chr3g0135831 58.511 94 39 0 31 124 44 137 5.62e-35 131
Msa0910870 MtrunA17_Chr6g0485571 57.143 98 42 0 27 124 5 102 2.27e-34 129
Msa0910870 MtrunA17_Chr4g0071051 59.140 93 38 0 31 123 99 191 8.30e-34 129
Msa0910870 MtrunA17_Chr2g0284481 55.556 99 44 0 33 131 15 113 2.90e-33 126
Msa0910870 MtrunA17_Chr8g0392001 59.574 94 37 1 32 124 21 114 1.92e-31 121
Msa0910870 MtrunA17_Chr1g0179321 56.757 74 32 0 19 92 35 108 3.88e-23 92.4
Msa0910870 MtrunA17_Chr4g0023771 57.377 61 25 1 33 92 15 75 1.21e-18 80.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0910870 AT5G62020.1 47.321 336 103 9 26 340 16 298 2.82e-86 262
Msa0910870 AT4G11660.1 45.954 346 123 9 25 329 51 373 1.04e-77 243
Msa0910870 AT1G46264.1 48.020 202 103 1 28 227 29 230 9.61e-59 193
Msa0910870 AT4G36990.1 43.779 217 82 4 21 226 2 189 1.54e-51 172
Msa0910870 AT2G41690.1 42.929 198 95 2 31 228 38 217 2.72e-43 150
Msa0910870 AT4G17750.1 63.725 102 37 0 23 124 42 143 1.06e-40 149
Msa0910870 AT3G22830.1 57.391 115 49 0 15 129 43 157 1.64e-40 147
Msa0910870 AT1G32330.1 67.021 94 31 0 31 124 35 128 5.66e-40 147
Msa0910870 AT1G32330.2 67.021 94 31 0 31 124 35 128 5.94e-40 147
Msa0910870 AT3G02990.1 66.667 96 31 1 29 124 20 114 6.35e-39 144
Msa0910870 AT5G43840.1 59.406 101 41 0 31 131 17 117 2.45e-38 138
Msa0910870 AT5G16820.1 65.625 96 32 1 29 124 24 118 4.55e-37 139
Msa0910870 AT5G16820.2 65.625 96 32 1 29 124 24 118 4.55e-37 139
Msa0910870 AT4G13980.1 56.731 104 45 0 34 137 24 127 1.68e-36 137
Msa0910870 AT3G51910.1 53.922 102 47 0 31 132 27 128 1.92e-36 133
Msa0910870 AT2G26150.1 59.574 94 38 0 31 124 42 135 2.06e-36 134
Msa0910870 AT2G26150.4 59.574 94 38 0 31 124 42 135 2.06e-36 134
Msa0910870 AT5G03720.2 59.615 104 35 1 33 129 55 158 2.41e-36 136
Msa0910870 AT5G03720.1 59.615 104 35 1 33 129 55 158 2.41e-36 136
Msa0910870 AT3G63350.1 56.701 97 42 0 27 123 22 118 3.79e-36 132
Msa0910870 AT5G54070.1 55.660 106 43 1 30 131 68 173 3.49e-35 131
Msa0910870 AT3G24520.1 61.053 95 37 0 30 124 14 108 1.02e-34 130
Msa0910870 AT1G67970.1 53.271 107 49 1 33 138 19 125 3.51e-32 124
Msa0910870 AT5G45710.3 59.000 100 40 1 29 128 10 108 8.24e-29 114
Msa0910870 AT5G45710.1 59.000 100 40 1 29 128 10 108 8.24e-29 114
Msa0910870 AT4G18880.1 57.009 107 45 1 26 132 9 114 1.63e-28 114
Msa0910870 AT4G18870.1 46.067 89 43 3 34 120 14 99 4.62e-19 86.3
Msa0910870 AT4G18870.1 42.391 92 50 1 29 117 139 230 8.08e-19 85.9
Msa0910870 AT1G77570.1 39.773 88 48 3 34 117 27 113 4.13e-11 60.8

Find 110 sgRNAs with CRISPR-Local

Find 270 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGGATTTGTATTCAGATTT+AGG 0.200860 6_2:+15953407 Msa0910870:three_prime_UTR
ATCAAATCAAGCGGCGGATT+TGG 0.255860 6_2:-15953128 None:intergenic
CAATTCCCAGAAGTTTCTTA+TGG 0.268062 6_2:+15953531 Msa0910870:three_prime_UTR
AACTTCCCATAAGAAACTTC+TGG 0.282124 6_2:-15953537 None:intergenic
CGAGAAAACGGTTGTGAAAA+TGG 0.282774 6_2:+15953230 Msa0910870:CDS
TTATTGTGTTTGAAATATTT+AGG 0.302478 6_2:-15952459 None:intergenic
ATGGATCCACGTTTATTGTT+TGG 0.338781 6_2:+15952406 Msa0910870:CDS
CATAAGAAACTTCTGGGAAT+TGG 0.340004 6_2:-15953530 None:intergenic
CGAGAAGGTACTAGTTAGTT+AGG 0.391090 6_2:-15952109 None:intergenic
GAAATGAATCCGAAGCTATT+CGG 0.407926 6_2:+15953182 Msa0910870:CDS
GTTATTTCGTGGAACGAAGA+TGG 0.410793 6_2:+15952387 Msa0910870:CDS
GTAATTGTGGTGGTTCTAGA+AGG 0.411908 6_2:-15952195 None:intergenic
AGGTTCGGTGGAGAATAAAA+AGG 0.415845 6_2:-15952175 None:intergenic
GTGAAGGAGCCATGAGGAAG+AGG 0.416606 6_2:-15952230 None:intergenic
AATTCCCAGAAGTTTCTTAT+GGG 0.416864 6_2:+15953532 Msa0910870:three_prime_UTR
TTCAGATTTAGGTTAGATAG+AGG 0.420374 6_2:+15953418 Msa0910870:three_prime_UTR
GGGTGTTGCAACGGTGGTTG+TGG 0.423416 6_2:-15952283 None:intergenic
CATGGCTCCTTCACCAGCTC+CGG 0.436113 6_2:+15952239 Msa0910870:exon
AGCTCCGCTGGTGCTCGTGC+TGG 0.436895 6_2:-15952930 None:intergenic
GTCAAACTCCGGTGAAGAAC+AGG 0.439484 6_2:+15952887 Msa0910870:CDS
AAGCTATTCGGTGTGGCGAT+TGG 0.446939 6_2:+15953194 Msa0910870:CDS
CTTGATGTAAGATTAATCAT+AGG 0.457367 6_2:-15953701 None:intergenic
ATAGAGGTGATGAGGGTGTA+GGG 0.459580 6_2:+15953434 Msa0910870:three_prime_UTR
ACGTGTGTCGTTTAACCGTA+TGG 0.462575 6_2:+15953505 Msa0910870:three_prime_UTR
GAAAGAGAGAAGAAAAGTAA+AGG 0.465722 6_2:-15952138 None:intergenic
GAGAGAAGAAAAGTAAAGGA+AGG 0.466871 6_2:-15952134 None:intergenic
TTTGAAAATTCCCACCGGTC+AGG 0.467906 6_2:-15952669 None:intergenic
TGGATTCACCGCCGTCATAC+CGG 0.469995 6_2:-15953108 None:intergenic
ACTTCCCATAAGAAACTTCT+GGG 0.474674 6_2:-15953536 None:intergenic
GCTTGATTTGATGCCGGCGG+TGG 0.475803 6_2:+15953139 Msa0910870:CDS
TGTTCTTCACCGGAGTTTGA+CGG 0.477010 6_2:-15952885 None:intergenic
TGTGGTGGTTCTAGAAGGTT+CGG 0.480407 6_2:-15952190 None:intergenic
GATAGAGGTGATGAGGGTGT+AGG 0.483545 6_2:+15953433 Msa0910870:three_prime_UTR
TAGGTTAGATAGAGGTGATG+AGG 0.488681 6_2:+15953426 Msa0910870:three_prime_UTR
AAATTGAAAATACAAAGAAA+AGG 0.491305 6_2:-15953589 None:intergenic
AGGTTAGATAGAGGTGATGA+GGG 0.499681 6_2:+15953427 Msa0910870:three_prime_UTR
TCTTTCACCGGTACTGTTGA+CGG 0.500426 6_2:+15952833 Msa0910870:CDS
GCAAAACGAGTTCGAGAAAA+CGG 0.504397 6_2:+15953218 Msa0910870:CDS
TGATGCCGGCGGTGGCAAAA+CGG 0.508254 6_2:+15953147 Msa0910870:CDS
AAATTACTAGCAAAGACAGT+AGG 0.509112 6_2:-15952432 None:intergenic
ATTGAGTTGACGAACAAAGC+TGG 0.509850 6_2:-15952487 None:intergenic
GCTACATCAACCTGGTTCTA+CGG 0.510688 6_2:+15953280 Msa0910870:CDS
ATCGCCACACCGAATAGCTT+CGG 0.514928 6_2:-15953191 None:intergenic
ACAAAATTCCCTCTTCCTCA+TGG 0.515666 6_2:+15952221 Msa0910870:exon
GGCTCCTTCACCAGCTCCGG+TGG 0.518505 6_2:+15952242 Msa0910870:CDS
AATTGAAAATACAAAGAAAA+GGG 0.518680 6_2:-15953588 None:intergenic
GCTCAAGGAAGTAGAGAATC+CGG 0.523566 6_2:+15953089 Msa0910870:CDS
GGACGTGAAATCTGAACCGT+TGG 0.523870 6_2:+15953301 Msa0910870:CDS
GATTTCACGTCCGTAGAACC+AGG 0.525961 6_2:-15953290 None:intergenic
GAGTTTGACGGTGAAATCAT+CGG 0.530218 6_2:-15952873 None:intergenic
GACGGTTGCAGTTCTTTCAC+CGG 0.531948 6_2:+15952821 Msa0910870:CDS
GGTATTACCGTCAACAGTAC+CGG 0.536641 6_2:-15952840 None:intergenic
TTCTGGGAATTGGTCCCATA+CGG 0.537481 6_2:-15953520 None:intergenic
GCGGTGGCAAAACGGAGCTC+CGG 0.538825 6_2:+15953155 Msa0910870:CDS
CGTGCATCTCCGCGTGCACA+CGG 0.542038 6_2:-15953466 None:intergenic
CTCAAGGGTGGGTGTTGCAA+CGG 0.547090 6_2:-15952292 None:intergenic
TCCGCCGCTTGATTTGATGC+CGG 0.547623 6_2:+15953133 Msa0910870:CDS
AAGTAGAGAATCCGGTATGA+CGG 0.547644 6_2:+15953097 Msa0910870:CDS
CAAACAGACGGTGGTGCTCA+AGG 0.552332 6_2:+15953074 Msa0910870:CDS
TTCGCCAGCACGAGCACCAG+CGG 0.553020 6_2:+15952926 Msa0910870:CDS
ACAGACACAGACGGCGGTGA+AGG 0.555353 6_2:-15952762 None:intergenic
GAATAGATCTCTGAGACTCA+AGG 0.566281 6_2:-15952308 None:intergenic
TCGACGAAAACGAGAGATTG+AGG 0.567733 6_2:+15952955 Msa0910870:CDS
AATAGATCTCTGAGACTCAA+GGG 0.568049 6_2:-15952307 None:intergenic
CGTGTGTCGTTTAACCGTAT+GGG 0.569154 6_2:+15953506 Msa0910870:three_prime_UTR
CTTCGGATTCATTTCCTCGC+CGG 0.573414 6_2:-15953174 None:intergenic
AATTACTAGCAAAGACAGTA+GGG 0.574678 6_2:-15952431 None:intergenic
CTATCGACGAGGTTATTTCG+TGG 0.578836 6_2:+15952376 Msa0910870:CDS
GAAATCATCGGCATCGCCGT+TGG 0.579266 6_2:-15952861 None:intergenic
CTGTTGCGGCTACATCAACC+TGG 0.584251 6_2:+15953272 Msa0910870:CDS
TGAAGGAGCCATGAGGAAGA+GGG 0.584654 6_2:-15952229 None:intergenic
CGATATCACCTGTTCTTCAC+CGG 0.593359 6_2:-15952895 None:intergenic
ATGATTTCACCGTCAAACTC+CGG 0.595073 6_2:+15952876 Msa0910870:CDS
TCACGTTCTTCACAATCCAA+CGG 0.603923 6_2:-15953317 None:intergenic
GAGAGGATGATACGCTGTTG+CGG 0.609437 6_2:+15953258 Msa0910870:CDS
TTAGAAAAGTAGTACCTGAC+CGG 0.612069 6_2:+15952655 Msa0910870:CDS
ATACAACAAAGGTACATCTA+CGG 0.613163 6_2:-15953659 None:intergenic
ACCGCCGGCATCAAATCAAG+CGG 0.614650 6_2:-15953137 None:intergenic
AGTTTCTACCGCTGTAGTAG+CGG 0.615493 6_2:-15952790 None:intergenic
AAGGGTGGGTGTTGCAACGG+TGG 0.622209 6_2:-15952289 None:intergenic
AACAATAACAGTCAAACAGA+CGG 0.625879 6_2:+15953062 Msa0910870:CDS
GCCGCTTGATTTGATGCCGG+CGG 0.632055 6_2:+15953136 Msa0910870:CDS
AAAAGTAGTACCTGACCGGT+GGG 0.635759 6_2:+15952659 Msa0910870:CDS
GATCTCTGAGACTCAAGGGT+GGG 0.636992 6_2:-15952303 None:intergenic
AAGTAAAGGAAGGAACGAGA+AGG 0.638079 6_2:-15952124 None:intergenic
TGTTTCTGCCGCTACTACAG+CGG 0.640818 6_2:+15952782 Msa0910870:CDS
ACTCATTTGAAAATTCCCAC+CGG 0.642486 6_2:-15952674 None:intergenic
GGTGGTTCTAGAAGGTTCGG+TGG 0.645498 6_2:-15952187 None:intergenic
GCGGCAGAAACAGACACAGA+CGG 0.648280 6_2:-15952771 None:intergenic
AATCTGAGACCGTGTGCACG+CGG 0.650854 6_2:+15953457 Msa0910870:three_prime_UTR
GAAAAGTAGTACCTGACCGG+TGG 0.652133 6_2:+15952658 Msa0910870:CDS
AATTCTAAACAATACAACAA+AGG 0.657539 6_2:-15953670 None:intergenic
TTGTGAAAATGGTGAAAGAG+AGG 0.661829 6_2:+15953241 Msa0910870:CDS
TAGAGAATCCGGTATGACGG+CGG 0.661957 6_2:+15953100 Msa0910870:CDS
GGCAAAACGGAGCTCCGGCG+AGG 0.665647 6_2:+15953160 Msa0910870:CDS
CGATAGATTTATCATCGACG+AGG 0.666770 6_2:-15952359 None:intergenic
CCAGCTCCGGTGGAAAACAA+CGG 0.682827 6_2:+15952252 Msa0910870:CDS
ACTGTTGACGGTAATACCAA+CGG 0.686195 6_2:+15952845 Msa0910870:CDS
AGATCTCTGAGACTCAAGGG+TGG 0.688159 6_2:-15952304 None:intergenic
AGGGTTCCAAACAATAAACG+TGG 0.693378 6_2:-15952412 None:intergenic
TTTGTGTAAATGACACGTGG+TGG 0.696706 6_2:+15953388 Msa0910870:exon
GGTAGAAACTACAACAGCGA+CGG 0.697044 6_2:+15952803 Msa0910870:CDS
CGATGATAAATCTATCGACG+AGG 0.705066 6_2:+15952365 Msa0910870:CDS
GAATCCGAAGCTATTCGGTG+TGG 0.707189 6_2:+15953187 Msa0910870:CDS
GTGATAATGATCGAACAGCG+TGG 0.735026 6_2:+15953336 Msa0910870:CDS
AATAACAGTCAAACAGACGG+TGG 0.748040 6_2:+15953065 Msa0910870:CDS
TATATTATGAGTGAGTGCAG+AGG 0.762443 6_2:+15953862 Msa0910870:three_prime_UTR
GCAGAAACAGACACAGACGG+CGG 0.769997 6_2:-15952768 None:intergenic
GAGCTGGTGAAGGAGCCATG+AGG 0.775388 6_2:-15952236 None:intergenic
GAGTTTGTGTAAATGACACG+TGG 0.796727 6_2:+15953385 Msa0910870:exon

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTGTGTTTGAAATATTT+AGG - chr6_2:15952462-15952481 None:intergenic 15.0%
!! AATTGAAAATACAAAGAAAA+GGG - chr6_2:15953591-15953610 None:intergenic 15.0%
!! AAATTGAAAATACAAAGAAA+AGG - chr6_2:15953592-15953611 None:intergenic 15.0%
!!! GTATTTTCAATTTTTTCTTT+TGG + chr6_2:15953599-15953618 Msa0910870:three_prime_UTR 15.0%
!!! AATTTTTTCTTTTGGTTTTT+TGG + chr6_2:15953607-15953626 Msa0910870:three_prime_UTR 15.0%
!!! ATTTTTTCTTTTGGTTTTTT+GGG + chr6_2:15953608-15953627 Msa0910870:three_prime_UTR 15.0%
!!! TTATTGTGTTTGAAATATTT+AGG - chr6_2:15952462-15952481 None:intergenic 15.0%
!! AATTGAAAATACAAAGAAAA+GGG - chr6_2:15953591-15953610 None:intergenic 15.0%
!! AAATTGAAAATACAAAGAAA+AGG - chr6_2:15953592-15953611 None:intergenic 15.0%
!!! GTATTTTCAATTTTTTCTTT+TGG + chr6_2:15953599-15953618 Msa0910870:three_prime_UTR 15.0%
!!! AATTTTTTCTTTTGGTTTTT+TGG + chr6_2:15953607-15953626 Msa0910870:three_prime_UTR 15.0%
!!! ATTTTTTCTTTTGGTTTTTT+GGG + chr6_2:15953608-15953627 Msa0910870:three_prime_UTR 15.0%
!!! TTATATGTTTTTGTCAGAAA+CGG - chr6_2:15952339-15952358 None:intergenic 20.0%
!!! TTTTGTTGATTTTTTTTGCA+GGG + chr6_2:15952630-15952649 Msa0910870:intron 20.0%
!!! TTTTGGATTAAAATTAGATG+TGG + chr6_2:15953635-15953654 Msa0910870:three_prime_UTR 20.0%
!! AATTCTAAACAATACAACAA+AGG - chr6_2:15953673-15953692 None:intergenic 20.0%
!!! CTTTTCTCTTTTTCATAAAA+AGG - chr6_2:15953791-15953810 None:intergenic 20.0%
!!! TTATATGTTTTTGTCAGAAA+CGG - chr6_2:15952339-15952358 None:intergenic 20.0%
!!! TTTTGTTGATTTTTTTTGCA+GGG + chr6_2:15952630-15952649 Msa0910870:intron 20.0%
!!! TTTTGGATTAAAATTAGATG+TGG + chr6_2:15953635-15953654 Msa0910870:three_prime_UTR 20.0%
!! AATTCTAAACAATACAACAA+AGG - chr6_2:15953673-15953692 None:intergenic 20.0%
!!! CTTTTCTCTTTTTCATAAAA+AGG - chr6_2:15953791-15953810 None:intergenic 20.0%
!!! GTTTTGTTGATTTTTTTTGC+AGG + chr6_2:15952629-15952648 Msa0910870:intron 25.0%
! CTTGATGTAAGATTAATCAT+AGG - chr6_2:15953704-15953723 None:intergenic 25.0%
!!! GTTTTGTTGATTTTTTTTGC+AGG + chr6_2:15952629-15952648 Msa0910870:intron 25.0%
! CTTGATGTAAGATTAATCAT+AGG - chr6_2:15953704-15953723 None:intergenic 25.0%
GAAAGAGAGAAGAAAAGTAA+AGG - chr6_2:15952141-15952160 None:intergenic 30.0%
! ATTTTGTTGAGTAATTGTGG+TGG - chr6_2:15952208-15952227 None:intergenic 30.0%
! GGAATTTTGTTGAGTAATTG+TGG - chr6_2:15952211-15952230 None:intergenic 30.0%
AATTACTAGCAAAGACAGTA+GGG - chr6_2:15952434-15952453 None:intergenic 30.0%
AAATTACTAGCAAAGACAGT+AGG - chr6_2:15952435-15952454 None:intergenic 30.0%
! TCAAATGAGTATTTTCGAAG+AGG + chr6_2:15952687-15952706 Msa0910870:CDS 30.0%
! ATTTTCGAAGAGGAGAAAAA+CGG + chr6_2:15952697-15952716 Msa0910870:CDS 30.0%
AACAATAACAGTCAAACAGA+CGG + chr6_2:15953062-15953081 Msa0910870:CDS 30.0%
GTGGATTTGTATTCAGATTT+AGG + chr6_2:15953407-15953426 Msa0910870:three_prime_UTR 30.0%
! TTCAGATTTAGGTTAGATAG+AGG + chr6_2:15953418-15953437 Msa0910870:three_prime_UTR 30.0%
AATTCCCAGAAGTTTCTTAT+GGG + chr6_2:15953532-15953551 Msa0910870:three_prime_UTR 30.0%
!!! TTGGTTTTTTGGGTACTTTT+TGG + chr6_2:15953618-15953637 Msa0910870:three_prime_UTR 30.0%
! ATACAACAAAGGTACATCTA+CGG - chr6_2:15953662-15953681 None:intergenic 30.0%
GAAAGAGAGAAGAAAAGTAA+AGG - chr6_2:15952141-15952160 None:intergenic 30.0%
! ATTTTGTTGAGTAATTGTGG+TGG - chr6_2:15952208-15952227 None:intergenic 30.0%
! GGAATTTTGTTGAGTAATTG+TGG - chr6_2:15952211-15952230 None:intergenic 30.0%
AATTACTAGCAAAGACAGTA+GGG - chr6_2:15952434-15952453 None:intergenic 30.0%
AAATTACTAGCAAAGACAGT+AGG - chr6_2:15952435-15952454 None:intergenic 30.0%
! TCAAATGAGTATTTTCGAAG+AGG + chr6_2:15952687-15952706 Msa0910870:CDS 30.0%
! ATTTTCGAAGAGGAGAAAAA+CGG + chr6_2:15952697-15952716 Msa0910870:CDS 30.0%
AACAATAACAGTCAAACAGA+CGG + chr6_2:15953062-15953081 Msa0910870:CDS 30.0%
GTGGATTTGTATTCAGATTT+AGG + chr6_2:15953407-15953426 Msa0910870:three_prime_UTR 30.0%
! TTCAGATTTAGGTTAGATAG+AGG + chr6_2:15953418-15953437 Msa0910870:three_prime_UTR 30.0%
AATTCCCAGAAGTTTCTTAT+GGG + chr6_2:15953532-15953551 Msa0910870:three_prime_UTR 30.0%
!!! TTGGTTTTTTGGGTACTTTT+TGG + chr6_2:15953618-15953637 Msa0910870:three_prime_UTR 30.0%
! ATACAACAAAGGTACATCTA+CGG - chr6_2:15953662-15953681 None:intergenic 30.0%
GAGAGAAGAAAAGTAAAGGA+AGG - chr6_2:15952137-15952156 None:intergenic 35.0%
!! AATAGATCTCTGAGACTCAA+GGG - chr6_2:15952310-15952329 None:intergenic 35.0%
ATGGATCCACGTTTATTGTT+TGG + chr6_2:15952406-15952425 Msa0910870:CDS 35.0%
TTTGACGAATTGAAGCGATA+AGG + chr6_2:15952591-15952610 Msa0910870:intron 35.0%
TTGACGAATTGAAGCGATAA+GGG + chr6_2:15952592-15952611 Msa0910870:intron 35.0%
TTAGAAAAGTAGTACCTGAC+CGG + chr6_2:15952655-15952674 Msa0910870:CDS 35.0%
ACTCATTTGAAAATTCCCAC+CGG - chr6_2:15952677-15952696 None:intergenic 35.0%
! GGCTTTTATGTGAGATTCAA+CGG + chr6_2:15952718-15952737 Msa0910870:CDS 35.0%
! TTTTATGTGAGATTCAACGG+AGG + chr6_2:15952721-15952740 Msa0910870:CDS 35.0%
GAAATGAATCCGAAGCTATT+CGG + chr6_2:15953182-15953201 Msa0910870:CDS 35.0%
TTGTGAAAATGGTGAAAGAG+AGG + chr6_2:15953241-15953260 Msa0910870:CDS 35.0%
! CATAAGAAACTTCTGGGAAT+TGG - chr6_2:15953533-15953552 None:intergenic 35.0%
CAATTCCCAGAAGTTTCTTA+TGG + chr6_2:15953531-15953550 Msa0910870:three_prime_UTR 35.0%
ACTTCCCATAAGAAACTTCT+GGG - chr6_2:15953539-15953558 None:intergenic 35.0%
AACTTCCCATAAGAAACTTC+TGG - chr6_2:15953540-15953559 None:intergenic 35.0%
TATATTATGAGTGAGTGCAG+AGG + chr6_2:15953862-15953881 Msa0910870:three_prime_UTR 35.0%
GAGAGAAGAAAAGTAAAGGA+AGG - chr6_2:15952137-15952156 None:intergenic 35.0%
!! AATAGATCTCTGAGACTCAA+GGG - chr6_2:15952310-15952329 None:intergenic 35.0%
ATGGATCCACGTTTATTGTT+TGG + chr6_2:15952406-15952425 Msa0910870:CDS 35.0%
TTTGACGAATTGAAGCGATA+AGG + chr6_2:15952591-15952610 Msa0910870:intron 35.0%
TTGACGAATTGAAGCGATAA+GGG + chr6_2:15952592-15952611 Msa0910870:intron 35.0%
TTAGAAAAGTAGTACCTGAC+CGG + chr6_2:15952655-15952674 Msa0910870:CDS 35.0%
ACTCATTTGAAAATTCCCAC+CGG - chr6_2:15952677-15952696 None:intergenic 35.0%
! GGCTTTTATGTGAGATTCAA+CGG + chr6_2:15952718-15952737 Msa0910870:CDS 35.0%
! TTTTATGTGAGATTCAACGG+AGG + chr6_2:15952721-15952740 Msa0910870:CDS 35.0%
GAAATGAATCCGAAGCTATT+CGG + chr6_2:15953182-15953201 Msa0910870:CDS 35.0%
TTGTGAAAATGGTGAAAGAG+AGG + chr6_2:15953241-15953260 Msa0910870:CDS 35.0%
! CATAAGAAACTTCTGGGAAT+TGG - chr6_2:15953533-15953552 None:intergenic 35.0%
CAATTCCCAGAAGTTTCTTA+TGG + chr6_2:15953531-15953550 Msa0910870:three_prime_UTR 35.0%
ACTTCCCATAAGAAACTTCT+GGG - chr6_2:15953539-15953558 None:intergenic 35.0%
AACTTCCCATAAGAAACTTC+TGG - chr6_2:15953540-15953559 None:intergenic 35.0%
TATATTATGAGTGAGTGCAG+AGG + chr6_2:15953862-15953881 Msa0910870:three_prime_UTR 35.0%
!! CGAGAAGGTACTAGTTAGTT+AGG - chr6_2:15952112-15952131 None:intergenic 40.0%
AAGTAAAGGAAGGAACGAGA+AGG - chr6_2:15952127-15952146 None:intergenic 40.0%
!! AGGTTCGGTGGAGAATAAAA+AGG - chr6_2:15952178-15952197 None:intergenic 40.0%
!! GTAATTGTGGTGGTTCTAGA+AGG - chr6_2:15952198-15952217 None:intergenic 40.0%
ACAAAATTCCCTCTTCCTCA+TGG + chr6_2:15952221-15952240 Msa0910870:exon 40.0%
!! GAATAGATCTCTGAGACTCA+AGG - chr6_2:15952311-15952330 None:intergenic 40.0%
! GTTTTTGTCAGAAACGGTGT+AGG - chr6_2:15952333-15952352 None:intergenic 40.0%
CGATAGATTTATCATCGACG+AGG - chr6_2:15952362-15952381 None:intergenic 40.0%
CGATGATAAATCTATCGACG+AGG + chr6_2:15952365-15952384 Msa0910870:CDS 40.0%
! GTTATTTCGTGGAACGAAGA+TGG + chr6_2:15952387-15952406 Msa0910870:CDS 40.0%
AGGGTTCCAAACAATAAACG+TGG - chr6_2:15952415-15952434 None:intergenic 40.0%
!! ATTGAGTTGACGAACAAAGC+TGG - chr6_2:15952490-15952509 None:intergenic 40.0%
ACTGTTGACGGTAATACCAA+CGG + chr6_2:15952845-15952864 Msa0910870:CDS 40.0%
GAGTTTGACGGTGAAATCAT+CGG - chr6_2:15952876-15952895 None:intergenic 40.0%
ATGATTTCACCGTCAAACTC+CGG + chr6_2:15952876-15952895 Msa0910870:CDS 40.0%
AATAACAGTCAAACAGACGG+TGG + chr6_2:15953065-15953084 Msa0910870:CDS 40.0%
AAGTAGAGAATCCGGTATGA+CGG + chr6_2:15953097-15953116 Msa0910870:CDS 40.0%
GCAAAACGAGTTCGAGAAAA+CGG + chr6_2:15953218-15953237 Msa0910870:CDS 40.0%
CGAGAAAACGGTTGTGAAAA+TGG + chr6_2:15953230-15953249 Msa0910870:CDS 40.0%
TCACGTTCTTCACAATCCAA+CGG - chr6_2:15953320-15953339 None:intergenic 40.0%
GAGTTTGTGTAAATGACACG+TGG + chr6_2:15953385-15953404 Msa0910870:exon 40.0%
TTTGTGTAAATGACACGTGG+TGG + chr6_2:15953388-15953407 Msa0910870:exon 40.0%
TAGGTTAGATAGAGGTGATG+AGG + chr6_2:15953426-15953445 Msa0910870:three_prime_UTR 40.0%
AGGTTAGATAGAGGTGATGA+GGG + chr6_2:15953427-15953446 Msa0910870:three_prime_UTR 40.0%
!! CGAGAAGGTACTAGTTAGTT+AGG - chr6_2:15952112-15952131 None:intergenic 40.0%
AAGTAAAGGAAGGAACGAGA+AGG - chr6_2:15952127-15952146 None:intergenic 40.0%
!! AGGTTCGGTGGAGAATAAAA+AGG - chr6_2:15952178-15952197 None:intergenic 40.0%
!! GTAATTGTGGTGGTTCTAGA+AGG - chr6_2:15952198-15952217 None:intergenic 40.0%
ACAAAATTCCCTCTTCCTCA+TGG + chr6_2:15952221-15952240 Msa0910870:exon 40.0%
!! GAATAGATCTCTGAGACTCA+AGG - chr6_2:15952311-15952330 None:intergenic 40.0%
! GTTTTTGTCAGAAACGGTGT+AGG - chr6_2:15952333-15952352 None:intergenic 40.0%
CGATAGATTTATCATCGACG+AGG - chr6_2:15952362-15952381 None:intergenic 40.0%
CGATGATAAATCTATCGACG+AGG + chr6_2:15952365-15952384 Msa0910870:CDS 40.0%
! GTTATTTCGTGGAACGAAGA+TGG + chr6_2:15952387-15952406 Msa0910870:CDS 40.0%
AGGGTTCCAAACAATAAACG+TGG - chr6_2:15952415-15952434 None:intergenic 40.0%
!! ATTGAGTTGACGAACAAAGC+TGG - chr6_2:15952490-15952509 None:intergenic 40.0%
ACTGTTGACGGTAATACCAA+CGG + chr6_2:15952845-15952864 Msa0910870:CDS 40.0%
GAGTTTGACGGTGAAATCAT+CGG - chr6_2:15952876-15952895 None:intergenic 40.0%
ATGATTTCACCGTCAAACTC+CGG + chr6_2:15952876-15952895 Msa0910870:CDS 40.0%
AATAACAGTCAAACAGACGG+TGG + chr6_2:15953065-15953084 Msa0910870:CDS 40.0%
AAGTAGAGAATCCGGTATGA+CGG + chr6_2:15953097-15953116 Msa0910870:CDS 40.0%
GCAAAACGAGTTCGAGAAAA+CGG + chr6_2:15953218-15953237 Msa0910870:CDS 40.0%
CGAGAAAACGGTTGTGAAAA+TGG + chr6_2:15953230-15953249 Msa0910870:CDS 40.0%
TCACGTTCTTCACAATCCAA+CGG - chr6_2:15953320-15953339 None:intergenic 40.0%
GAGTTTGTGTAAATGACACG+TGG + chr6_2:15953385-15953404 Msa0910870:exon 40.0%
TTTGTGTAAATGACACGTGG+TGG + chr6_2:15953388-15953407 Msa0910870:exon 40.0%
TAGGTTAGATAGAGGTGATG+AGG + chr6_2:15953426-15953445 Msa0910870:three_prime_UTR 40.0%
AGGTTAGATAGAGGTGATGA+GGG + chr6_2:15953427-15953446 Msa0910870:three_prime_UTR 40.0%
!! TGTGGTGGTTCTAGAAGGTT+CGG - chr6_2:15952193-15952212 None:intergenic 45.0%
!! GTTTCTCCGTTGTTTTCCAC+CGG - chr6_2:15952261-15952280 None:intergenic 45.0%
! CTATCGACGAGGTTATTTCG+TGG + chr6_2:15952376-15952395 Msa0910870:CDS 45.0%
AAAAGTAGTACCTGACCGGT+GGG + chr6_2:15952659-15952678 Msa0910870:CDS 45.0%
TTTGAAAATTCCCACCGGTC+AGG - chr6_2:15952672-15952691 None:intergenic 45.0%
AGTTTCTACCGCTGTAGTAG+CGG - chr6_2:15952793-15952812 None:intergenic 45.0%
GGTAGAAACTACAACAGCGA+CGG + chr6_2:15952803-15952822 Msa0910870:CDS 45.0%
TCTTTCACCGGTACTGTTGA+CGG + chr6_2:15952833-15952852 Msa0910870:CDS 45.0%
GGTATTACCGTCAACAGTAC+CGG - chr6_2:15952843-15952862 None:intergenic 45.0%
TGTTCTTCACCGGAGTTTGA+CGG - chr6_2:15952888-15952907 None:intergenic 45.0%
CGATATCACCTGTTCTTCAC+CGG - chr6_2:15952898-15952917 None:intergenic 45.0%
TCGACGAAAACGAGAGATTG+AGG + chr6_2:15952955-15952974 Msa0910870:CDS 45.0%
GCTCAAGGAAGTAGAGAATC+CGG + chr6_2:15953089-15953108 Msa0910870:CDS 45.0%
! ATCAAATCAAGCGGCGGATT+TGG - chr6_2:15953131-15953150 None:intergenic 45.0%
!! GCTACATCAACCTGGTTCTA+CGG + chr6_2:15953280-15953299 Msa0910870:CDS 45.0%
! GTGATAATGATCGAACAGCG+TGG + chr6_2:15953336-15953355 Msa0910870:CDS 45.0%
! ATAGAGGTGATGAGGGTGTA+GGG + chr6_2:15953434-15953453 Msa0910870:three_prime_UTR 45.0%
!! ACGTGTGTCGTTTAACCGTA+TGG + chr6_2:15953505-15953524 Msa0910870:three_prime_UTR 45.0%
!! CGTGTGTCGTTTAACCGTAT+GGG + chr6_2:15953506-15953525 Msa0910870:three_prime_UTR 45.0%
! TTCTGGGAATTGGTCCCATA+CGG - chr6_2:15953523-15953542 None:intergenic 45.0%
!! TGTGGTGGTTCTAGAAGGTT+CGG - chr6_2:15952193-15952212 None:intergenic 45.0%
!! GTTTCTCCGTTGTTTTCCAC+CGG - chr6_2:15952261-15952280 None:intergenic 45.0%
! CTATCGACGAGGTTATTTCG+TGG + chr6_2:15952376-15952395 Msa0910870:CDS 45.0%
AAAAGTAGTACCTGACCGGT+GGG + chr6_2:15952659-15952678 Msa0910870:CDS 45.0%
TTTGAAAATTCCCACCGGTC+AGG - chr6_2:15952672-15952691 None:intergenic 45.0%
AGTTTCTACCGCTGTAGTAG+CGG - chr6_2:15952793-15952812 None:intergenic 45.0%
GGTAGAAACTACAACAGCGA+CGG + chr6_2:15952803-15952822 Msa0910870:CDS 45.0%
TCTTTCACCGGTACTGTTGA+CGG + chr6_2:15952833-15952852 Msa0910870:CDS 45.0%
GGTATTACCGTCAACAGTAC+CGG - chr6_2:15952843-15952862 None:intergenic 45.0%
TGTTCTTCACCGGAGTTTGA+CGG - chr6_2:15952888-15952907 None:intergenic 45.0%
CGATATCACCTGTTCTTCAC+CGG - chr6_2:15952898-15952917 None:intergenic 45.0%
TCGACGAAAACGAGAGATTG+AGG + chr6_2:15952955-15952974 Msa0910870:CDS 45.0%
GCTCAAGGAAGTAGAGAATC+CGG + chr6_2:15953089-15953108 Msa0910870:CDS 45.0%
! ATCAAATCAAGCGGCGGATT+TGG - chr6_2:15953131-15953150 None:intergenic 45.0%
!! GCTACATCAACCTGGTTCTA+CGG + chr6_2:15953280-15953299 Msa0910870:CDS 45.0%
! GTGATAATGATCGAACAGCG+TGG + chr6_2:15953336-15953355 Msa0910870:CDS 45.0%
! ATAGAGGTGATGAGGGTGTA+GGG + chr6_2:15953434-15953453 Msa0910870:three_prime_UTR 45.0%
!! ACGTGTGTCGTTTAACCGTA+TGG + chr6_2:15953505-15953524 Msa0910870:three_prime_UTR 45.0%
!! CGTGTGTCGTTTAACCGTAT+GGG + chr6_2:15953506-15953525 Msa0910870:three_prime_UTR 45.0%
! TTCTGGGAATTGGTCCCATA+CGG - chr6_2:15953523-15953542 None:intergenic 45.0%
!! AAAGAAAATAATATAATAAT+AGG - chr6_2:15952537-15952556 None:intergenic 5.0%
!! AAAGAAAATAATATAATAAT+AGG - chr6_2:15952537-15952556 None:intergenic 5.0%
TGAAGGAGCCATGAGGAAGA+GGG - chr6_2:15952232-15952251 None:intergenic 50.0%
!! GATCTCTGAGACTCAAGGGT+GGG - chr6_2:15952306-15952325 None:intergenic 50.0%
!! AGATCTCTGAGACTCAAGGG+TGG - chr6_2:15952307-15952326 None:intergenic 50.0%
GAAAAGTAGTACCTGACCGG+TGG + chr6_2:15952658-15952677 Msa0910870:CDS 50.0%
! TGTTTCTGCCGCTACTACAG+CGG + chr6_2:15952782-15952801 Msa0910870:CDS 50.0%
GACGGTTGCAGTTCTTTCAC+CGG + chr6_2:15952821-15952840 Msa0910870:CDS 50.0%
GTCAAACTCCGGTGAAGAAC+AGG + chr6_2:15952887-15952906 Msa0910870:CDS 50.0%
TAGAGAATCCGGTATGACGG+CGG + chr6_2:15953100-15953119 Msa0910870:CDS 50.0%
CTTCGGATTCATTTCCTCGC+CGG - chr6_2:15953177-15953196 None:intergenic 50.0%
! GAATCCGAAGCTATTCGGTG+TGG + chr6_2:15953187-15953206 Msa0910870:CDS 50.0%
ATCGCCACACCGAATAGCTT+CGG - chr6_2:15953194-15953213 None:intergenic 50.0%
!! AAGCTATTCGGTGTGGCGAT+TGG + chr6_2:15953194-15953213 Msa0910870:CDS 50.0%
GAGAGGATGATACGCTGTTG+CGG + chr6_2:15953258-15953277 Msa0910870:CDS 50.0%
GATTTCACGTCCGTAGAACC+AGG - chr6_2:15953293-15953312 None:intergenic 50.0%
GGACGTGAAATCTGAACCGT+TGG + chr6_2:15953301-15953320 Msa0910870:CDS 50.0%
! GATAGAGGTGATGAGGGTGT+AGG + chr6_2:15953433-15953452 Msa0910870:three_prime_UTR 50.0%
TGAAGGAGCCATGAGGAAGA+GGG - chr6_2:15952232-15952251 None:intergenic 50.0%
!! GATCTCTGAGACTCAAGGGT+GGG - chr6_2:15952306-15952325 None:intergenic 50.0%
!! AGATCTCTGAGACTCAAGGG+TGG - chr6_2:15952307-15952326 None:intergenic 50.0%
GAAAAGTAGTACCTGACCGG+TGG + chr6_2:15952658-15952677 Msa0910870:CDS 50.0%
! TGTTTCTGCCGCTACTACAG+CGG + chr6_2:15952782-15952801 Msa0910870:CDS 50.0%
GACGGTTGCAGTTCTTTCAC+CGG + chr6_2:15952821-15952840 Msa0910870:CDS 50.0%
GTCAAACTCCGGTGAAGAAC+AGG + chr6_2:15952887-15952906 Msa0910870:CDS 50.0%
TAGAGAATCCGGTATGACGG+CGG + chr6_2:15953100-15953119 Msa0910870:CDS 50.0%
CTTCGGATTCATTTCCTCGC+CGG - chr6_2:15953177-15953196 None:intergenic 50.0%
! GAATCCGAAGCTATTCGGTG+TGG + chr6_2:15953187-15953206 Msa0910870:CDS 50.0%
ATCGCCACACCGAATAGCTT+CGG - chr6_2:15953194-15953213 None:intergenic 50.0%
!! AAGCTATTCGGTGTGGCGAT+TGG + chr6_2:15953194-15953213 Msa0910870:CDS 50.0%
GAGAGGATGATACGCTGTTG+CGG + chr6_2:15953258-15953277 Msa0910870:CDS 50.0%
GATTTCACGTCCGTAGAACC+AGG - chr6_2:15953293-15953312 None:intergenic 50.0%
GGACGTGAAATCTGAACCGT+TGG + chr6_2:15953301-15953320 Msa0910870:CDS 50.0%
! GATAGAGGTGATGAGGGTGT+AGG + chr6_2:15953433-15953452 Msa0910870:three_prime_UTR 50.0%
!! GGTGGTTCTAGAAGGTTCGG+TGG - chr6_2:15952190-15952209 None:intergenic 55.0%
GTGAAGGAGCCATGAGGAAG+AGG - chr6_2:15952233-15952252 None:intergenic 55.0%
! TTTTCCACCGGAGCTGGTGA+AGG - chr6_2:15952249-15952268 None:intergenic 55.0%
CCAGCTCCGGTGGAAAACAA+CGG + chr6_2:15952252-15952271 Msa0910870:CDS 55.0%
! CTCAAGGGTGGGTGTTGCAA+CGG - chr6_2:15952295-15952314 None:intergenic 55.0%
GCAGAAACAGACACAGACGG+CGG - chr6_2:15952771-15952790 None:intergenic 55.0%
GCGGCAGAAACAGACACAGA+CGG - chr6_2:15952774-15952793 None:intergenic 55.0%
GAAATCATCGGCATCGCCGT+TGG - chr6_2:15952864-15952883 None:intergenic 55.0%
! TTTTCGTCGAGAAGCTCCGC+TGG - chr6_2:15952945-15952964 None:intergenic 55.0%
CAAACAGACGGTGGTGCTCA+AGG + chr6_2:15953074-15953093 Msa0910870:CDS 55.0%
TGGATTCACCGCCGTCATAC+CGG - chr6_2:15953111-15953130 None:intergenic 55.0%
! TCCGCCGCTTGATTTGATGC+CGG + chr6_2:15953133-15953152 Msa0910870:CDS 55.0%
ACCGCCGGCATCAAATCAAG+CGG - chr6_2:15953140-15953159 None:intergenic 55.0%
CTGTTGCGGCTACATCAACC+TGG + chr6_2:15953272-15953291 Msa0910870:CDS 55.0%
! AATCTGAGACCGTGTGCACG+CGG + chr6_2:15953457-15953476 Msa0910870:three_prime_UTR 55.0%
!! GGTGGTTCTAGAAGGTTCGG+TGG - chr6_2:15952190-15952209 None:intergenic 55.0%
GTGAAGGAGCCATGAGGAAG+AGG - chr6_2:15952233-15952252 None:intergenic 55.0%
! TTTTCCACCGGAGCTGGTGA+AGG - chr6_2:15952249-15952268 None:intergenic 55.0%
CCAGCTCCGGTGGAAAACAA+CGG + chr6_2:15952252-15952271 Msa0910870:CDS 55.0%
! CTCAAGGGTGGGTGTTGCAA+CGG - chr6_2:15952295-15952314 None:intergenic 55.0%
GCAGAAACAGACACAGACGG+CGG - chr6_2:15952771-15952790 None:intergenic 55.0%
GCGGCAGAAACAGACACAGA+CGG - chr6_2:15952774-15952793 None:intergenic 55.0%
GAAATCATCGGCATCGCCGT+TGG - chr6_2:15952864-15952883 None:intergenic 55.0%
! TTTTCGTCGAGAAGCTCCGC+TGG - chr6_2:15952945-15952964 None:intergenic 55.0%
CAAACAGACGGTGGTGCTCA+AGG + chr6_2:15953074-15953093 Msa0910870:CDS 55.0%
TGGATTCACCGCCGTCATAC+CGG - chr6_2:15953111-15953130 None:intergenic 55.0%
! TCCGCCGCTTGATTTGATGC+CGG + chr6_2:15953133-15953152 Msa0910870:CDS 55.0%
ACCGCCGGCATCAAATCAAG+CGG - chr6_2:15953140-15953159 None:intergenic 55.0%
CTGTTGCGGCTACATCAACC+TGG + chr6_2:15953272-15953291 Msa0910870:CDS 55.0%
! AATCTGAGACCGTGTGCACG+CGG + chr6_2:15953457-15953476 Msa0910870:three_prime_UTR 55.0%
GAGCTGGTGAAGGAGCCATG+AGG - chr6_2:15952239-15952258 None:intergenic 60.0%
CATGGCTCCTTCACCAGCTC+CGG + chr6_2:15952239-15952258 Msa0910870:exon 60.0%
!! CCGTTGTTTTCCACCGGAGC+TGG - chr6_2:15952255-15952274 None:intergenic 60.0%
! GGGTGTTGCAACGGTGGTTG+TGG - chr6_2:15952286-15952305 None:intergenic 60.0%
! AAGGGTGGGTGTTGCAACGG+TGG - chr6_2:15952292-15952311 None:intergenic 60.0%
ACAGACACAGACGGCGGTGA+AGG - chr6_2:15952765-15952784 None:intergenic 60.0%
GCCGGCATCAAATCAAGCGG+CGG - chr6_2:15953137-15953156 None:intergenic 60.0%
! GCCGCTTGATTTGATGCCGG+CGG + chr6_2:15953136-15953155 Msa0910870:CDS 60.0%
! GCTTGATTTGATGCCGGCGG+TGG + chr6_2:15953139-15953158 Msa0910870:CDS 60.0%
TGATGCCGGCGGTGGCAAAA+CGG + chr6_2:15953147-15953166 Msa0910870:CDS 60.0%
GAGCTGGTGAAGGAGCCATG+AGG - chr6_2:15952239-15952258 None:intergenic 60.0%
CATGGCTCCTTCACCAGCTC+CGG + chr6_2:15952239-15952258 Msa0910870:exon 60.0%
!! CCGTTGTTTTCCACCGGAGC+TGG - chr6_2:15952255-15952274 None:intergenic 60.0%
! GGGTGTTGCAACGGTGGTTG+TGG - chr6_2:15952286-15952305 None:intergenic 60.0%
! AAGGGTGGGTGTTGCAACGG+TGG - chr6_2:15952292-15952311 None:intergenic 60.0%
ACAGACACAGACGGCGGTGA+AGG - chr6_2:15952765-15952784 None:intergenic 60.0%
GCCGGCATCAAATCAAGCGG+CGG - chr6_2:15953137-15953156 None:intergenic 60.0%
! GCCGCTTGATTTGATGCCGG+CGG + chr6_2:15953136-15953155 Msa0910870:CDS 60.0%
! GCTTGATTTGATGCCGGCGG+TGG + chr6_2:15953139-15953158 Msa0910870:CDS 60.0%
TGATGCCGGCGGTGGCAAAA+CGG + chr6_2:15953147-15953166 Msa0910870:CDS 60.0%
TTCGCCAGCACGAGCACCAG+CGG + chr6_2:15952926-15952945 Msa0910870:CDS 65.0%
! GAGCTCCGTTTTGCCACCGC+CGG - chr6_2:15953155-15953174 None:intergenic 65.0%
GCGGTGGCAAAACGGAGCTC+CGG + chr6_2:15953155-15953174 Msa0910870:CDS 65.0%
CGTGCATCTCCGCGTGCACA+CGG - chr6_2:15953469-15953488 None:intergenic 65.0%
TTCGCCAGCACGAGCACCAG+CGG + chr6_2:15952926-15952945 Msa0910870:CDS 65.0%
! GAGCTCCGTTTTGCCACCGC+CGG - chr6_2:15953155-15953174 None:intergenic 65.0%
GCGGTGGCAAAACGGAGCTC+CGG + chr6_2:15953155-15953174 Msa0910870:CDS 65.0%
CGTGCATCTCCGCGTGCACA+CGG - chr6_2:15953469-15953488 None:intergenic 65.0%
GGCTCCTTCACCAGCTCCGG+TGG + chr6_2:15952242-15952261 Msa0910870:CDS 70.0%
AGCTCCGCTGGTGCTCGTGC+TGG - chr6_2:15952933-15952952 None:intergenic 70.0%
GGCAAAACGGAGCTCCGGCG+AGG + chr6_2:15953160-15953179 Msa0910870:CDS 70.0%
GGCTCCTTCACCAGCTCCGG+TGG + chr6_2:15952242-15952261 Msa0910870:CDS 70.0%
AGCTCCGCTGGTGCTCGTGC+TGG - chr6_2:15952933-15952952 None:intergenic 70.0%
GGCAAAACGGAGCTCCGGCG+AGG + chr6_2:15953160-15953179 Msa0910870:CDS 70.0%
Chromosome Type Strat End Strand Name
chr6_2 gene 15952098 15953898 15952098 ID=Msa0910870;Name=Msa0910870
chr6_2 mRNA 15952098 15953898 15952098 ID=Msa0910870-mRNA-1;Parent=Msa0910870;Name=Msa0910870-mRNA-1;_AED=0.04;_eAED=0.04;_QI=142|1|1|1|1|1|2|498|341
chr6_2 exon 15952098 15952515 15952098 ID=Msa0910870-mRNA-1:exon:3504;Parent=Msa0910870-mRNA-1
chr6_2 exon 15952651 15953898 15952651 ID=Msa0910870-mRNA-1:exon:3505;Parent=Msa0910870-mRNA-1
chr6_2 five_prime_UTR 15952098 15952239 15952098 ID=Msa0910870-mRNA-1:five_prime_utr;Parent=Msa0910870-mRNA-1
chr6_2 CDS 15952240 15952515 15952240 ID=Msa0910870-mRNA-1:cds;Parent=Msa0910870-mRNA-1
chr6_2 CDS 15952651 15953400 15952651 ID=Msa0910870-mRNA-1:cds;Parent=Msa0910870-mRNA-1
chr6_2 three_prime_UTR 15953401 15953898 15953401 ID=Msa0910870-mRNA-1:three_prime_utr;Parent=Msa0910870-mRNA-1
Gene Sequence

>Msa0910870

ATGGCTCCTTCACCAGCTCCGGTGGAAAACAACGGAGAAACAACCACAACCACCGTTGCAACACCCACCCTTGAGTCTCAGAGATCTATTCCTACACCGTTTCTGACAAAAACATATAACCTCGTCGATGATAAATCTATCGACGAGGTTATTTCGTGGAACGAAGATGGATCCACGTTTATTGTTTGGAACCCTACTGTCTTTGCTAGTAATTTGCTTCCTAAATATTTCAAACACAATAATTTCTCCAGCTTTGTTCGTCAACTCAATACTTATGGATTTAGAAAAGTAGTACCTGACCGGTGGGAATTTTCAAATGAGTATTTTCGAAGAGGAGAAAAACGGCTTTTATGTGAGATTCAACGGAGGAAGATATGTTCTTCAACACCTTCACCGCCGTCTGTGTCTGTTTCTGCCGCTACTACAGCGGTAGAAACTACAACAGCGACGGTTGCAGTTCTTTCACCGGTACTGTTGACGGTAATACCAACGGCGATGCCGATGATTTCACCGTCAAACTCCGGTGAAGAACAGGTGATATCGTCGAGTTCTTCGCCAGCACGAGCACCAGCGGAGCTTCTCGACGAAAACGAGAGATTGAGGAAAGAGAACTGTCAATTGAATAAAGAACTTGCTGAGATGAGATTGCTTTGTAACAATATATACTCTCTAATGTCAAATTTTGCAAACAATAACAGTCAAACAGACGGTGGTGCTCAAGGAAGTAGAGAATCCGGTATGACGGCGGTGAATCCAAATCCGCCGCTTGATTTGATGCCGGCGGTGGCAAAACGGAGCTCCGGCGAGGAAATGAATCCGAAGCTATTCGGTGTGGCGATTGGAGCAAAACGAGTTCGAGAAAACGGTTGTGAAAATGGTGAAAGAGAGGATGATACGCTGTTGCGGCTACATCAACCTGGTTCTACGGACGTGAAATCTGAACCGTTGGATTGTGAAGAACGTGATAATGATCGAACAGCGTGGTTGAATCAGAGTCGTATAAAGAATCAGAGTTTGTGTAAATGA
Protein sequence

>Msa0910870

MAPSPAPVENNGETTTTTVATPTLESQRSIPTPFLTKTYNLVDDKSIDEVISWNEDGSTFIVWNPTVFASNLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFSNEYFRRGEKRLLCEIQRRKICSSTPSPPSVSVSAATTAVETTTATVAVLSPVLLTVIPTAMPMISPSNSGEEQVISSSSSPARAPAELLDENERLRKENCQLNKELAEMRLLCNNIYSLMSNFANNNSQTDGGAQGSRESGMTAVNPNPPLDLMPAVAKRSSGEEMNPKLFGVAIGAKRVRENGCENGEREDDTLLRLHQPGSTDVKSEPLDCEERDNDRTAWLNQSRIKNQSLCK*