Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0911100 | XP_013468810.2 | 83.396 | 265 | 44 | 0 | 1 | 265 | 25 | 289 | 2.11e-165 | 469 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0911100 | sp|Q70FG7|DODA_BETVU | 60.920 | 261 | 101 | 1 | 3 | 262 | 7 | 267 | 5.34e-118 | 341 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0911100 | Msa0985770 | 0.960419 | 1.548374e-118 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0911100 | MtrunA17_Chr1g0188451 | 83.396 | 265 | 44 | 0 | 1 | 265 | 25 | 289 | 1.94e-169 | 469 |
| Msa0911100 | MtrunA17_Chr6g0477101 | 67.416 | 267 | 84 | 3 | 1 | 265 | 1 | 266 | 5.46e-133 | 376 |
| Msa0911100 | MtrunA17_Chr6g0464111 | 85.616 | 146 | 20 | 1 | 121 | 265 | 1 | 146 | 8.62e-91 | 265 |
| Msa0911100 | MtrunA17_Chr6g0464101 | 73.077 | 52 | 9 | 1 | 64 | 110 | 18 | 69 | 7.51e-16 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0911100 | AT4G15093.1 | 61.961 | 255 | 93 | 3 | 3 | 253 | 4 | 258 | 2.28e-116 | 335 |
Find 79 sgRNAs with CRISPR-Local
Find 298 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTGTTCTGAGTGGCATTTC+CGG | 0.192956 | 6_2:+16781052 | None:intergenic |
| AGAATGGAAGAGGGTCTTTC+AGG | 0.275383 | 6_2:+16782522 | None:intergenic |
| TTCTTGTTATCTCTGCTCAT+TGG | 0.308154 | 6_2:-16782503 | Msa0911100:CDS |
| TGCAGGAGTTGTTTCATCTA+TGG | 0.314245 | 6_2:+16782578 | None:intergenic |
| GGGCTGTTGAATTTATTTCC+TGG | 0.327296 | 6_2:-16780992 | Msa0911100:CDS |
| GCGAAAGCCCTCCTCATCCC+TGG | 0.349166 | 6_2:-16781013 | Msa0911100:CDS |
| TTCACCCTCTTTGCTAACTT+TGG | 0.380034 | 6_2:+16781290 | None:intergenic |
| CATGGAAGTTCTTTAAATCA+TGG | 0.381837 | 6_2:-16782557 | Msa0911100:CDS |
| TCTTGTTATCTCTGCTCATT+GGG | 0.388123 | 6_2:-16782502 | Msa0911100:CDS |
| AACTTTGGTGCACCTGGTGC+TGG | 0.390270 | 6_2:+16781305 | None:intergenic |
| GTCCATGATAGCTGGGATCT+TGG | 0.392358 | 6_2:-16780665 | Msa0911100:CDS |
| GGATGAGCCCACTTTGCATA+TGG | 0.398584 | 6_2:+16780758 | None:intergenic |
| ACAAACCTTGTTCAAGCTGC+TGG | 0.406394 | 6_2:+16782413 | None:intergenic |
| ATTTCCATTGCATGTAGCTA+TGG | 0.413445 | 6_2:-16780720 | Msa0911100:CDS |
| GAAACCATGTATGACTTTGA+AGG | 0.414094 | 6_2:-16782441 | Msa0911100:CDS |
| TTTGCTAACTTTGGTGCACC+TGG | 0.425639 | 6_2:+16781299 | None:intergenic |
| AAGGAACTTATCGAAGCGTC+TGG | 0.430194 | 6_2:-16781269 | Msa0911100:CDS |
| GGTACTTACCATTATAACTT+AGG | 0.430513 | 6_2:-16781122 | Msa0911100:CDS |
| CCAAAGTTGTCCATGATAGC+TGG | 0.432727 | 6_2:-16780673 | Msa0911100:CDS |
| AACGTTGACGGTTGGAACTA+AGG | 0.447360 | 6_2:+16782476 | None:intergenic |
| TCTGGATACATCAACATTAG+AGG | 0.447942 | 6_2:+16781191 | None:intergenic |
| TGCAATGGAAATAAGTGATC+AGG | 0.452909 | 6_2:+16780731 | None:intergenic |
| AATACACAAAATGGCATTGA+AGG | 0.455237 | 6_2:-16782637 | None:intergenic |
| TCTGTTTCAACAAATAGAAA+TGG | 0.455735 | 6_2:-16781143 | Msa0911100:CDS |
| CGAAGCGTCTGGGTTGAGTC+AGG | 0.477654 | 6_2:-16781258 | Msa0911100:CDS |
| TTTCCATTGCATGTAGCTAT+GGG | 0.479050 | 6_2:-16780719 | Msa0911100:CDS |
| CCGGAAATGCCACTCAGAAC+AGG | 0.484192 | 6_2:-16781052 | Msa0911100:CDS |
| AGAACACCCTCATCTTTAAG+AGG | 0.486129 | 6_2:+16781086 | None:intergenic |
| GTTCTTTAAATCATGGAAAG+AGG | 0.487815 | 6_2:-16782550 | Msa0911100:CDS |
| CAAACCTTGTTCAAGCTGCT+GGG | 0.488050 | 6_2:+16782414 | None:intergenic |
| ATTGTGATCAACAACGTTGA+CGG | 0.488252 | 6_2:+16782464 | None:intergenic |
| GGAAATAAATTCAACAGCCC+AGG | 0.490345 | 6_2:+16780995 | None:intergenic |
| CCAGCTATCATGGACAACTT+TGG | 0.490808 | 6_2:+16780673 | None:intergenic |
| GATGAGCCCACTTTGCATAT+GGG | 0.491858 | 6_2:+16780759 | None:intergenic |
| AATTCAACAGCCCAGGGATG+AGG | 0.500569 | 6_2:+16781002 | None:intergenic |
| AACCAAGATCCCAGCTATCA+TGG | 0.503856 | 6_2:+16780663 | None:intergenic |
| CGAAAGCCCTCCTCATCCCT+GGG | 0.506364 | 6_2:-16781012 | Msa0911100:CDS |
| CTTCCCCAGCAGCTTGAACA+AGG | 0.506964 | 6_2:-16782418 | Msa0911100:intron |
| ATGAGCAGAGATAACAAGAA+TGG | 0.512163 | 6_2:+16782506 | None:intergenic |
| AGAGATAACAAGAATGGAAG+AGG | 0.517098 | 6_2:+16782512 | None:intergenic |
| TGATCAACAACGTTGACGGT+TGG | 0.532367 | 6_2:+16782468 | None:intergenic |
| GCTCCCATAGCTACATGCAA+TGG | 0.538842 | 6_2:+16780716 | None:intergenic |
| CACACTGGTATATCAGCCTC+TGG | 0.540607 | 6_2:+16781173 | None:intergenic |
| CATGTAGCTATGGGAGCTGC+TGG | 0.542879 | 6_2:-16780710 | Msa0911100:CDS |
| CAGCTCAAATATCCAGCACC+AGG | 0.547966 | 6_2:-16781317 | Msa0911100:CDS |
| CAAAGTTGTCCATGATAGCT+GGG | 0.549127 | 6_2:-16780672 | Msa0911100:CDS |
| GTTTCATCTATGGCAAGTGT+TGG | 0.551012 | 6_2:+16782588 | None:intergenic |
| TGCACCAAAGTTAGCAAAGA+GGG | 0.552440 | 6_2:-16781294 | Msa0911100:CDS |
| GGTGTTCTGATACTCGGATC+CGG | 0.552759 | 6_2:-16781071 | Msa0911100:CDS |
| GGAAATAAGTGATCAGGCCA+TGG | 0.555253 | 6_2:+16780737 | None:intergenic |
| ATGAGCCCACTTTGCATATG+GGG | 0.560161 | 6_2:+16780760 | None:intergenic |
| GATGAGGGTGTTCTGATACT+CGG | 0.566930 | 6_2:-16781077 | Msa0911100:CDS |
| TCAACAGCCCAGGGATGAGG+AGG | 0.568161 | 6_2:+16781005 | None:intergenic |
| GAAGCCTTCAAAGTCATACA+TGG | 0.577887 | 6_2:+16782437 | None:intergenic |
| AGCTGCTGGTGAAAATTCAA+AGG | 0.578264 | 6_2:-16780696 | Msa0911100:CDS |
| TGTAAATCGTTATGAAGAGA+AGG | 0.579486 | 6_2:-16780783 | Msa0911100:CDS |
| GATTTAAAGAACTTCCATGC+AGG | 0.581374 | 6_2:+16782561 | None:intergenic |
| ATGCAAAGTGGGCTCATCCA+TGG | 0.582793 | 6_2:-16780754 | Msa0911100:CDS |
| AAACCTTGTTCAAGCTGCTG+GGG | 0.587139 | 6_2:+16782415 | None:intergenic |
| ATTAGCTCCTCTTAAAGATG+AGG | 0.591047 | 6_2:-16781093 | Msa0911100:CDS |
| AAAATTCTCTCATCGAAGGA+AGG | 0.596245 | 6_2:-16780965 | Msa0911100:intron |
| GAAGGCCCCATATGCAAAGT+GGG | 0.603034 | 6_2:-16780765 | Msa0911100:CDS |
| TAGATGAAACAACTCCTGCA+TGG | 0.611109 | 6_2:-16782575 | Msa0911100:CDS |
| GAAATAAATTCAACAGCCCA+GGG | 0.611787 | 6_2:+16780996 | None:intergenic |
| GGATGAGGAGGGCTTTCGCG+AGG | 0.616852 | 6_2:+16781017 | None:intergenic |
| TTAGCTCCTCTTAAAGATGA+GGG | 0.624747 | 6_2:-16781092 | Msa0911100:CDS |
| AGAAGGCCCCATATGCAAAG+TGG | 0.631427 | 6_2:-16780766 | Msa0911100:CDS |
| AAAGTTAGCAAAGAGGGTGA+AGG | 0.634969 | 6_2:-16781288 | Msa0911100:CDS |
| GAGATAACAAGAATGGAAGA+GGG | 0.635486 | 6_2:+16782513 | None:intergenic |
| AGGAACTTATCGAAGCGTCT+GGG | 0.635683 | 6_2:-16781268 | Msa0911100:CDS |
| GTGGGCTTGATCATGGAACA+TGG | 0.640571 | 6_2:-16781217 | Msa0911100:CDS |
| GAAACAGATAGTTGACACAC+TGG | 0.645189 | 6_2:+16781158 | None:intergenic |
| ACAAGCTGCTGTGAAACCAA+AGG | 0.651065 | 6_2:+16780625 | None:intergenic |
| CAACAGCCCAGGGATGAGGA+GGG | 0.651220 | 6_2:+16781006 | None:intergenic |
| GTGCACCAAAGTTAGCAAAG+AGG | 0.686066 | 6_2:-16781295 | Msa0911100:CDS |
| AACTACTGTCCTGTTCTGAG+TGG | 0.690045 | 6_2:+16781043 | None:intergenic |
| TCTAATGTTGATGTATCCAG+AGG | 0.716219 | 6_2:-16781189 | Msa0911100:CDS |
| TGGGCTTGATCATGGAACAT+GGG | 0.724784 | 6_2:-16781216 | Msa0911100:CDS |
| GCAAGTGTTGGTGTACCATG+TGG | 0.755158 | 6_2:+16782600 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATTCCTTATTTAATTTT+AGG | - | chr6_2:16780958-16780977 | Msa0911100:intron | 10.0% |
| !!! | TTATTCCTTATTTAATTTTA+GGG | - | chr6_2:16780959-16780978 | Msa0911100:intron | 10.0% |
| !! | GAAAAATTGATATATTTATA+GGG | - | chr6_2:16781436-16781455 | Msa0911100:intron | 10.0% |
| !!! | TTTATTCCTTATTTAATTTT+AGG | - | chr6_2:16780958-16780977 | Msa0911100:intron | 10.0% |
| !!! | TTATTCCTTATTTAATTTTA+GGG | - | chr6_2:16780959-16780978 | Msa0911100:intron | 10.0% |
| !! | GAAAAATTGATATATTTATA+GGG | - | chr6_2:16781436-16781455 | Msa0911100:intron | 10.0% |
| !! | TTTAACCCTAAAATTAAATA+AGG | + | chr6_2:16780967-16780986 | None:intergenic | 15.0% |
| !!! | TAGTGATTGAAAATTTTATA+GGG | + | chr6_2:16781062-16781081 | None:intergenic | 15.0% |
| !! | CGAAAAATTGATATATTTAT+AGG | - | chr6_2:16781435-16781454 | Msa0911100:intron | 15.0% |
| !! | ATTCAAATCTCATTTAATTA+GGG | + | chr6_2:16781536-16781555 | None:intergenic | 15.0% |
| !! | AATTCAAATCTCATTTAATT+AGG | + | chr6_2:16781537-16781556 | None:intergenic | 15.0% |
| !! | TAAACTATTGAAATCTAATT+TGG | - | chr6_2:16781723-16781742 | Msa0911100:intron | 15.0% |
| !! | AAACTATTGAAATCTAATTT+GGG | - | chr6_2:16781724-16781743 | Msa0911100:intron | 15.0% |
| !! | TTTAACCCTAAAATTAAATA+AGG | + | chr6_2:16780967-16780986 | None:intergenic | 15.0% |
| !!! | TAGTGATTGAAAATTTTATA+GGG | + | chr6_2:16781062-16781081 | None:intergenic | 15.0% |
| !! | CGAAAAATTGATATATTTAT+AGG | - | chr6_2:16781435-16781454 | Msa0911100:intron | 15.0% |
| !! | ATTCAAATCTCATTTAATTA+GGG | + | chr6_2:16781536-16781555 | None:intergenic | 15.0% |
| !! | AATTCAAATCTCATTTAATT+AGG | + | chr6_2:16781537-16781556 | None:intergenic | 15.0% |
| !! | TAAACTATTGAAATCTAATT+TGG | - | chr6_2:16781723-16781742 | Msa0911100:intron | 15.0% |
| !! | AAACTATTGAAATCTAATTT+GGG | - | chr6_2:16781724-16781743 | Msa0911100:intron | 15.0% |
| !! | TCAATGATGTATTTAAACAT+GGG | - | chr6_2:16780889-16780908 | Msa0911100:intron | 20.0% |
| !! | GAAAAGTTGACATATTTATA+AGG | + | chr6_2:16781002-16781021 | None:intergenic | 20.0% |
| !!! | GTAGTGATTGAAAATTTTAT+AGG | + | chr6_2:16781063-16781082 | None:intergenic | 20.0% |
| !!! | AAATTTTCAATCACTACTTT+TGG | - | chr6_2:16781066-16781085 | Msa0911100:CDS | 20.0% |
| !!! | TATGATATTTTGGATTTTTC+TGG | - | chr6_2:16781292-16781311 | Msa0911100:CDS | 20.0% |
| !!! | ATATGAGTTTACTTTAAAAG+AGG | - | chr6_2:16781344-16781363 | Msa0911100:intron | 20.0% |
| !!! | TATGAGTTTACTTTAAAAGA+GGG | - | chr6_2:16781345-16781364 | Msa0911100:intron | 20.0% |
| !!! | AAATTTTCAATCTTCACTTT+TGG | + | chr6_2:16781372-16781391 | None:intergenic | 20.0% |
| !!! | GTGAAGATTGAAAATTTTAT+AGG | - | chr6_2:16781375-16781394 | Msa0911100:intron | 20.0% |
| !! | AAATAATCATTATTTGAACC+CGG | - | chr6_2:16781693-16781712 | Msa0911100:intron | 20.0% |
| !! | TTCAATAGTTTATTAGAATC+CGG | + | chr6_2:16781715-16781734 | None:intergenic | 20.0% |
| !! | AATTATTTGTTCCTAAACTT+AGG | + | chr6_2:16781781-16781800 | None:intergenic | 20.0% |
| !! | TCAATGATGTATTTAAACAT+GGG | - | chr6_2:16780889-16780908 | Msa0911100:intron | 20.0% |
| !! | GAAAAGTTGACATATTTATA+AGG | + | chr6_2:16781002-16781021 | None:intergenic | 20.0% |
| !!! | GTAGTGATTGAAAATTTTAT+AGG | + | chr6_2:16781063-16781082 | None:intergenic | 20.0% |
| !!! | AAATTTTCAATCACTACTTT+TGG | - | chr6_2:16781066-16781085 | Msa0911100:CDS | 20.0% |
| !!! | TATGATATTTTGGATTTTTC+TGG | - | chr6_2:16781292-16781311 | Msa0911100:CDS | 20.0% |
| !!! | ATATGAGTTTACTTTAAAAG+AGG | - | chr6_2:16781344-16781363 | Msa0911100:intron | 20.0% |
| !!! | TATGAGTTTACTTTAAAAGA+GGG | - | chr6_2:16781345-16781364 | Msa0911100:intron | 20.0% |
| !!! | AAATTTTCAATCTTCACTTT+TGG | + | chr6_2:16781372-16781391 | None:intergenic | 20.0% |
| !!! | GTGAAGATTGAAAATTTTAT+AGG | - | chr6_2:16781375-16781394 | Msa0911100:intron | 20.0% |
| !! | AAATAATCATTATTTGAACC+CGG | - | chr6_2:16781693-16781712 | Msa0911100:intron | 20.0% |
| !! | TTCAATAGTTTATTAGAATC+CGG | + | chr6_2:16781715-16781734 | None:intergenic | 20.0% |
| !! | AATTATTTGTTCCTAAACTT+AGG | + | chr6_2:16781781-16781800 | None:intergenic | 20.0% |
| ! | GTCAATGATGTATTTAAACA+TGG | - | chr6_2:16780888-16780907 | Msa0911100:intron | 25.0% |
| !!! | TTTTAAGTCCCTACAAAATT+GGG | - | chr6_2:16780925-16780944 | Msa0911100:intron | 25.0% |
| !! | TAAAATGTCCCAATTTTGTA+GGG | + | chr6_2:16780936-16780955 | None:intergenic | 25.0% |
| !! | TTAAAATGTCCCAATTTTGT+AGG | + | chr6_2:16780937-16780956 | None:intergenic | 25.0% |
| !! | AGTTGAAGGAAAATTTTAGA+AGG | + | chr6_2:16781033-16781052 | None:intergenic | 25.0% |
| !! | GAGTGATTCTTATGATATTT+TGG | - | chr6_2:16781282-16781301 | Msa0911100:CDS | 25.0% |
| !! | TAGAATTTTCCTTCAACTTT+TGG | + | chr6_2:16781403-16781422 | None:intergenic | 25.0% |
| !!! | TGGGTGCAATTTTTTTTAAA+GGG | + | chr6_2:16781505-16781524 | None:intergenic | 25.0% |
| ! | TTTAATTAGGGACTAAAACT+GGG | + | chr6_2:16781524-16781543 | None:intergenic | 25.0% |
| ! | ATTTAATTAGGGACTAAAAC+TGG | + | chr6_2:16781525-16781544 | None:intergenic | 25.0% |
| ! | ATTATTACAAACTCAAGGAA+TGG | + | chr6_2:16781560-16781579 | None:intergenic | 25.0% |
| ! | TGCATATTATTACAAACTCA+AGG | + | chr6_2:16781565-16781584 | None:intergenic | 25.0% |
| ! | TCAATAGTTTATTAGAATCC+GGG | + | chr6_2:16781714-16781733 | None:intergenic | 25.0% |
| ! | ACATAGGTACAAAAGAAAAA+GGG | + | chr6_2:16781887-16781906 | None:intergenic | 25.0% |
| !! | TCATTGAACTTGTTCTTTAT+TGG | - | chr6_2:16781906-16781925 | Msa0911100:intron | 25.0% |
| ! | TCTGTTTCAACAAATAGAAA+TGG | - | chr6_2:16782103-16782122 | Msa0911100:intron | 25.0% |
| !! | ATGCTTTTCCTAAGTTATAA+TGG | + | chr6_2:16782135-16782154 | None:intergenic | 25.0% |
| ! | TTAAAAAATTCTCTCATCGA+AGG | - | chr6_2:16782277-16782296 | Msa0911100:intron | 25.0% |
| ! | ATTTGAATTCGAACAAACAA+TGG | - | chr6_2:16782339-16782358 | Msa0911100:intron | 25.0% |
| !! | TCTTTTTCTTATGTTTCCTT+TGG | - | chr6_2:16782605-16782624 | Msa0911100:CDS | 25.0% |
| ! | GTCAATGATGTATTTAAACA+TGG | - | chr6_2:16780888-16780907 | Msa0911100:intron | 25.0% |
| !!! | TTTTAAGTCCCTACAAAATT+GGG | - | chr6_2:16780925-16780944 | Msa0911100:intron | 25.0% |
| !! | TAAAATGTCCCAATTTTGTA+GGG | + | chr6_2:16780936-16780955 | None:intergenic | 25.0% |
| !! | TTAAAATGTCCCAATTTTGT+AGG | + | chr6_2:16780937-16780956 | None:intergenic | 25.0% |
| !! | AGTTGAAGGAAAATTTTAGA+AGG | + | chr6_2:16781033-16781052 | None:intergenic | 25.0% |
| !! | GAGTGATTCTTATGATATTT+TGG | - | chr6_2:16781282-16781301 | Msa0911100:CDS | 25.0% |
| !! | TAGAATTTTCCTTCAACTTT+TGG | + | chr6_2:16781403-16781422 | None:intergenic | 25.0% |
| !!! | TGGGTGCAATTTTTTTTAAA+GGG | + | chr6_2:16781505-16781524 | None:intergenic | 25.0% |
| ! | TTTAATTAGGGACTAAAACT+GGG | + | chr6_2:16781524-16781543 | None:intergenic | 25.0% |
| ! | ATTTAATTAGGGACTAAAAC+TGG | + | chr6_2:16781525-16781544 | None:intergenic | 25.0% |
| ! | ATTATTACAAACTCAAGGAA+TGG | + | chr6_2:16781560-16781579 | None:intergenic | 25.0% |
| ! | TGCATATTATTACAAACTCA+AGG | + | chr6_2:16781565-16781584 | None:intergenic | 25.0% |
| ! | TCAATAGTTTATTAGAATCC+GGG | + | chr6_2:16781714-16781733 | None:intergenic | 25.0% |
| ! | ACATAGGTACAAAAGAAAAA+GGG | + | chr6_2:16781887-16781906 | None:intergenic | 25.0% |
| !! | TCATTGAACTTGTTCTTTAT+TGG | - | chr6_2:16781906-16781925 | Msa0911100:intron | 25.0% |
| ! | TCTGTTTCAACAAATAGAAA+TGG | - | chr6_2:16782103-16782122 | Msa0911100:intron | 25.0% |
| !! | ATGCTTTTCCTAAGTTATAA+TGG | + | chr6_2:16782135-16782154 | None:intergenic | 25.0% |
| ! | TTAAAAAATTCTCTCATCGA+AGG | - | chr6_2:16782277-16782296 | Msa0911100:intron | 25.0% |
| ! | ATTTGAATTCGAACAAACAA+TGG | - | chr6_2:16782339-16782358 | Msa0911100:intron | 25.0% |
| !! | TCTTTTTCTTATGTTTCCTT+TGG | - | chr6_2:16782605-16782624 | Msa0911100:CDS | 25.0% |
| ! | GAAACATTTTACATACCACA+TGG | - | chr6_2:16780631-16780650 | Msa0911100:CDS | 30.0% |
| CATGGAAGTTCTTTAAATCA+TGG | - | chr6_2:16780689-16780708 | Msa0911100:CDS | 30.0% | |
| GTTCTTTAAATCATGGAAAG+AGG | - | chr6_2:16780696-16780715 | Msa0911100:CDS | 30.0% | |
| !! | GTTTTAAGTCCCTACAAAAT+TGG | - | chr6_2:16780924-16780943 | Msa0911100:intron | 30.0% |
| TTATAGGGACTAAAAGTTGA+AGG | + | chr6_2:16781047-16781066 | None:intergenic | 30.0% | |
| TTATAGGAACCAAAAGTTGA+AGG | - | chr6_2:16781391-16781410 | Msa0911100:intron | 30.0% | |
| AAGTTGAAGGAAAATTCTAG+AGG | - | chr6_2:16781404-16781423 | Msa0911100:intron | 30.0% | |
| AGTTGAAGGAAAATTCTAGA+GGG | - | chr6_2:16781405-16781424 | Msa0911100:intron | 30.0% | |
| !!! | CTGGGTGCAATTTTTTTTAA+AGG | + | chr6_2:16781506-16781525 | None:intergenic | 30.0% |
| AAATAAGTAAAGTCTGACCA+CGG | + | chr6_2:16781622-16781641 | None:intergenic | 30.0% | |
| GACATAGGTACAAAAGAAAA+AGG | + | chr6_2:16781888-16781907 | None:intergenic | 30.0% | |
| AAGAACAAGTTCAATGACAT+AGG | + | chr6_2:16781903-16781922 | None:intergenic | 30.0% | |
| TAGACGAAGATAAAAAACGT+GGG | - | chr6_2:16782011-16782030 | Msa0911100:intron | 30.0% | |
| GGTACTTACCATTATAACTT+AGG | - | chr6_2:16782124-16782143 | Msa0911100:intron | 30.0% | |
| !!! | GATGAGAGAATTTTTTAACC+AGG | + | chr6_2:16782275-16782294 | None:intergenic | 30.0% |
| ! | GAAGGTATGTTGTCAAATAA+TGG | - | chr6_2:16782299-16782318 | Msa0911100:intron | 30.0% |
| TGTAAATCGTTATGAAGAGA+AGG | - | chr6_2:16782463-16782482 | Msa0911100:CDS | 30.0% | |
| ! | GAAACATTTTACATACCACA+TGG | - | chr6_2:16780631-16780650 | Msa0911100:CDS | 30.0% |
| CATGGAAGTTCTTTAAATCA+TGG | - | chr6_2:16780689-16780708 | Msa0911100:CDS | 30.0% | |
| GTTCTTTAAATCATGGAAAG+AGG | - | chr6_2:16780696-16780715 | Msa0911100:CDS | 30.0% | |
| !! | GTTTTAAGTCCCTACAAAAT+TGG | - | chr6_2:16780924-16780943 | Msa0911100:intron | 30.0% |
| TTATAGGGACTAAAAGTTGA+AGG | + | chr6_2:16781047-16781066 | None:intergenic | 30.0% | |
| TTATAGGAACCAAAAGTTGA+AGG | - | chr6_2:16781391-16781410 | Msa0911100:intron | 30.0% | |
| AAGTTGAAGGAAAATTCTAG+AGG | - | chr6_2:16781404-16781423 | Msa0911100:intron | 30.0% | |
| AGTTGAAGGAAAATTCTAGA+GGG | - | chr6_2:16781405-16781424 | Msa0911100:intron | 30.0% | |
| !!! | CTGGGTGCAATTTTTTTTAA+AGG | + | chr6_2:16781506-16781525 | None:intergenic | 30.0% |
| AAATAAGTAAAGTCTGACCA+CGG | + | chr6_2:16781622-16781641 | None:intergenic | 30.0% | |
| GACATAGGTACAAAAGAAAA+AGG | + | chr6_2:16781888-16781907 | None:intergenic | 30.0% | |
| AAGAACAAGTTCAATGACAT+AGG | + | chr6_2:16781903-16781922 | None:intergenic | 30.0% | |
| TAGACGAAGATAAAAAACGT+GGG | - | chr6_2:16782011-16782030 | Msa0911100:intron | 30.0% | |
| GGTACTTACCATTATAACTT+AGG | - | chr6_2:16782124-16782143 | Msa0911100:intron | 30.0% | |
| !!! | GATGAGAGAATTTTTTAACC+AGG | + | chr6_2:16782275-16782294 | None:intergenic | 30.0% |
| ! | GAAGGTATGTTGTCAAATAA+TGG | - | chr6_2:16782299-16782318 | Msa0911100:intron | 30.0% |
| TGTAAATCGTTATGAAGAGA+AGG | - | chr6_2:16782463-16782482 | Msa0911100:CDS | 30.0% | |
| GATTTAAAGAACTTCCATGC+AGG | + | chr6_2:16780688-16780707 | None:intergenic | 35.0% | |
| GAGATAACAAGAATGGAAGA+GGG | + | chr6_2:16780736-16780755 | None:intergenic | 35.0% | |
| AGAGATAACAAGAATGGAAG+AGG | + | chr6_2:16780737-16780756 | None:intergenic | 35.0% | |
| ATGAGCAGAGATAACAAGAA+TGG | + | chr6_2:16780743-16780762 | None:intergenic | 35.0% | |
| ! | TTCTTGTTATCTCTGCTCAT+TGG | - | chr6_2:16780743-16780762 | Msa0911100:CDS | 35.0% |
| ! | TCTTGTTATCTCTGCTCATT+GGG | - | chr6_2:16780744-16780763 | Msa0911100:CDS | 35.0% |
| ATTGTGATCAACAACGTTGA+CGG | + | chr6_2:16780785-16780804 | None:intergenic | 35.0% | |
| GAAACCATGTATGACTTTGA+AGG | - | chr6_2:16780805-16780824 | Msa0911100:intron | 35.0% | |
| TTCTTGCCTAATGTTGAGTT+CGG | + | chr6_2:16781650-16781669 | None:intergenic | 35.0% | |
| CTTTAGCTATGCCTAAGTTT+AGG | - | chr6_2:16781767-16781786 | Msa0911100:intron | 35.0% | |
| AAATCTATCCCACAAAGAAC+AGG | - | chr6_2:16781818-16781837 | Msa0911100:intron | 35.0% | |
| CTACATTTCCTGTTCTTTGT+GGG | + | chr6_2:16781829-16781848 | None:intergenic | 35.0% | |
| TCTACATTTCCTGTTCTTTG+TGG | + | chr6_2:16781830-16781849 | None:intergenic | 35.0% | |
| GTAGACGAAGATAAAAAACG+TGG | - | chr6_2:16782010-16782029 | Msa0911100:intron | 35.0% | |
| TCTGGATACATCAACATTAG+AGG | + | chr6_2:16782058-16782077 | None:intergenic | 35.0% | |
| TCTAATGTTGATGTATCCAG+AGG | - | chr6_2:16782057-16782076 | Msa0911100:intron | 35.0% | |
| ATTAGCTCCTCTTAAAGATG+AGG | - | chr6_2:16782153-16782172 | Msa0911100:intron | 35.0% | |
| TTAGCTCCTCTTAAAGATGA+GGG | - | chr6_2:16782154-16782173 | Msa0911100:intron | 35.0% | |
| GAAATAAATTCAACAGCCCA+GGG | + | chr6_2:16782253-16782272 | None:intergenic | 35.0% | |
| AAAATTCTCTCATCGAAGGA+AGG | - | chr6_2:16782281-16782300 | Msa0911100:intron | 35.0% | |
| TGCAATGGAAATAAGTGATC+AGG | + | chr6_2:16782518-16782537 | None:intergenic | 35.0% | |
| ATTTCCATTGCATGTAGCTA+TGG | - | chr6_2:16782526-16782545 | Msa0911100:CDS | 35.0% | |
| TTTCCATTGCATGTAGCTAT+GGG | - | chr6_2:16782527-16782546 | Msa0911100:CDS | 35.0% | |
| GATTTAAAGAACTTCCATGC+AGG | + | chr6_2:16780688-16780707 | None:intergenic | 35.0% | |
| GAGATAACAAGAATGGAAGA+GGG | + | chr6_2:16780736-16780755 | None:intergenic | 35.0% | |
| AGAGATAACAAGAATGGAAG+AGG | + | chr6_2:16780737-16780756 | None:intergenic | 35.0% | |
| ATGAGCAGAGATAACAAGAA+TGG | + | chr6_2:16780743-16780762 | None:intergenic | 35.0% | |
| ! | TTCTTGTTATCTCTGCTCAT+TGG | - | chr6_2:16780743-16780762 | Msa0911100:CDS | 35.0% |
| ! | TCTTGTTATCTCTGCTCATT+GGG | - | chr6_2:16780744-16780763 | Msa0911100:CDS | 35.0% |
| ATTGTGATCAACAACGTTGA+CGG | + | chr6_2:16780785-16780804 | None:intergenic | 35.0% | |
| GAAACCATGTATGACTTTGA+AGG | - | chr6_2:16780805-16780824 | Msa0911100:intron | 35.0% | |
| TTCTTGCCTAATGTTGAGTT+CGG | + | chr6_2:16781650-16781669 | None:intergenic | 35.0% | |
| CTTTAGCTATGCCTAAGTTT+AGG | - | chr6_2:16781767-16781786 | Msa0911100:intron | 35.0% | |
| AAATCTATCCCACAAAGAAC+AGG | - | chr6_2:16781818-16781837 | Msa0911100:intron | 35.0% | |
| CTACATTTCCTGTTCTTTGT+GGG | + | chr6_2:16781829-16781848 | None:intergenic | 35.0% | |
| TCTACATTTCCTGTTCTTTG+TGG | + | chr6_2:16781830-16781849 | None:intergenic | 35.0% | |
| GTAGACGAAGATAAAAAACG+TGG | - | chr6_2:16782010-16782029 | Msa0911100:intron | 35.0% | |
| TCTGGATACATCAACATTAG+AGG | + | chr6_2:16782058-16782077 | None:intergenic | 35.0% | |
| TCTAATGTTGATGTATCCAG+AGG | - | chr6_2:16782057-16782076 | Msa0911100:intron | 35.0% | |
| ATTAGCTCCTCTTAAAGATG+AGG | - | chr6_2:16782153-16782172 | Msa0911100:intron | 35.0% | |
| TTAGCTCCTCTTAAAGATGA+GGG | - | chr6_2:16782154-16782173 | Msa0911100:intron | 35.0% | |
| GAAATAAATTCAACAGCCCA+GGG | + | chr6_2:16782253-16782272 | None:intergenic | 35.0% | |
| AAAATTCTCTCATCGAAGGA+AGG | - | chr6_2:16782281-16782300 | Msa0911100:intron | 35.0% | |
| TGCAATGGAAATAAGTGATC+AGG | + | chr6_2:16782518-16782537 | None:intergenic | 35.0% | |
| ATTTCCATTGCATGTAGCTA+TGG | - | chr6_2:16782526-16782545 | Msa0911100:CDS | 35.0% | |
| TTTCCATTGCATGTAGCTAT+GGG | - | chr6_2:16782527-16782546 | Msa0911100:CDS | 35.0% | |
| GTTTCATCTATGGCAAGTGT+TGG | + | chr6_2:16780661-16780680 | None:intergenic | 40.0% | |
| ! | TGCAGGAGTTGTTTCATCTA+TGG | + | chr6_2:16780671-16780690 | None:intergenic | 40.0% |
| TAGATGAAACAACTCCTGCA+TGG | - | chr6_2:16780671-16780690 | Msa0911100:CDS | 40.0% | |
| GAAGCCTTCAAAGTCATACA+TGG | + | chr6_2:16780812-16780831 | None:intergenic | 40.0% | |
| GGCTGACTGAAACAATTTAG+AGG | + | chr6_2:16781601-16781620 | None:intergenic | 40.0% | |
| TAAATTGTTTCAGTCAGCCG+TGG | - | chr6_2:16781602-16781621 | Msa0911100:intron | 40.0% | |
| AACATTAGGCAAGAATCGCA+AGG | - | chr6_2:16781655-16781674 | Msa0911100:intron | 40.0% | |
| ! | TTTGGGCACAGTCTTACTTT+TGG | - | chr6_2:16781741-16781760 | Msa0911100:intron | 40.0% |
| TGCACCAAAGTTAGCAAAGA+GGG | - | chr6_2:16781952-16781971 | Msa0911100:intron | 40.0% | |
| TTCACCCTCTTTGCTAACTT+TGG | + | chr6_2:16781959-16781978 | None:intergenic | 40.0% | |
| AAAGTTAGCAAAGAGGGTGA+AGG | - | chr6_2:16781958-16781977 | Msa0911100:intron | 40.0% | |
| AAAAAACGTGGGCTTGATCA+TGG | - | chr6_2:16782022-16782041 | Msa0911100:intron | 40.0% | |
| GAAACAGATAGTTGACACAC+TGG | + | chr6_2:16782091-16782110 | None:intergenic | 40.0% | |
| AGAACACCCTCATCTTTAAG+AGG | + | chr6_2:16782163-16782182 | None:intergenic | 40.0% | |
| GGAAATAAATTCAACAGCCC+AGG | + | chr6_2:16782254-16782273 | None:intergenic | 40.0% | |
| GGGCTGTTGAATTTATTTCC+TGG | - | chr6_2:16782254-16782273 | Msa0911100:intron | 40.0% | |
| AGCTGCTGGTGAAAATTCAA+AGG | - | chr6_2:16782550-16782569 | Msa0911100:CDS | 40.0% | |
| CAAAGTTGTCCATGATAGCT+GGG | - | chr6_2:16782574-16782593 | Msa0911100:CDS | 40.0% | |
| GTTTCATCTATGGCAAGTGT+TGG | + | chr6_2:16780661-16780680 | None:intergenic | 40.0% | |
| ! | TGCAGGAGTTGTTTCATCTA+TGG | + | chr6_2:16780671-16780690 | None:intergenic | 40.0% |
| TAGATGAAACAACTCCTGCA+TGG | - | chr6_2:16780671-16780690 | Msa0911100:CDS | 40.0% | |
| GAAGCCTTCAAAGTCATACA+TGG | + | chr6_2:16780812-16780831 | None:intergenic | 40.0% | |
| GGCTGACTGAAACAATTTAG+AGG | + | chr6_2:16781601-16781620 | None:intergenic | 40.0% | |
| TAAATTGTTTCAGTCAGCCG+TGG | - | chr6_2:16781602-16781621 | Msa0911100:intron | 40.0% | |
| AACATTAGGCAAGAATCGCA+AGG | - | chr6_2:16781655-16781674 | Msa0911100:intron | 40.0% | |
| ! | TTTGGGCACAGTCTTACTTT+TGG | - | chr6_2:16781741-16781760 | Msa0911100:intron | 40.0% |
| TGCACCAAAGTTAGCAAAGA+GGG | - | chr6_2:16781952-16781971 | Msa0911100:intron | 40.0% | |
| TTCACCCTCTTTGCTAACTT+TGG | + | chr6_2:16781959-16781978 | None:intergenic | 40.0% | |
| AAAGTTAGCAAAGAGGGTGA+AGG | - | chr6_2:16781958-16781977 | Msa0911100:intron | 40.0% | |
| AAAAAACGTGGGCTTGATCA+TGG | - | chr6_2:16782022-16782041 | Msa0911100:intron | 40.0% | |
| GAAACAGATAGTTGACACAC+TGG | + | chr6_2:16782091-16782110 | None:intergenic | 40.0% | |
| AGAACACCCTCATCTTTAAG+AGG | + | chr6_2:16782163-16782182 | None:intergenic | 40.0% | |
| GGAAATAAATTCAACAGCCC+AGG | + | chr6_2:16782254-16782273 | None:intergenic | 40.0% | |
| GGGCTGTTGAATTTATTTCC+TGG | - | chr6_2:16782254-16782273 | Msa0911100:intron | 40.0% | |
| AGCTGCTGGTGAAAATTCAA+AGG | - | chr6_2:16782550-16782569 | Msa0911100:CDS | 40.0% | |
| CAAAGTTGTCCATGATAGCT+GGG | - | chr6_2:16782574-16782593 | Msa0911100:CDS | 40.0% | |
| AGAATGGAAGAGGGTCTTTC+AGG | + | chr6_2:16780727-16780746 | None:intergenic | 45.0% | |
| AACGTTGACGGTTGGAACTA+AGG | + | chr6_2:16780773-16780792 | None:intergenic | 45.0% | |
| TGATCAACAACGTTGACGGT+TGG | + | chr6_2:16780781-16780800 | None:intergenic | 45.0% | |
| AAACCTTGTTCAAGCTGCTG+GGG | + | chr6_2:16780834-16780853 | None:intergenic | 45.0% | |
| CAAACCTTGTTCAAGCTGCT+GGG | + | chr6_2:16780835-16780854 | None:intergenic | 45.0% | |
| ACAAACCTTGTTCAAGCTGC+TGG | + | chr6_2:16780836-16780855 | None:intergenic | 45.0% | |
| TCACAGCCGAACTCAACATT+AGG | - | chr6_2:16781641-16781660 | Msa0911100:intron | 45.0% | |
| ! | TTTGCTAACTTTGGTGCACC+TGG | + | chr6_2:16781950-16781969 | None:intergenic | 45.0% |
| GTGCACCAAAGTTAGCAAAG+AGG | - | chr6_2:16781951-16781970 | Msa0911100:intron | 45.0% | |
| ! | AAGGAACTTATCGAAGCGTC+TGG | - | chr6_2:16781977-16781996 | Msa0911100:intron | 45.0% |
| ! | AGGAACTTATCGAAGCGTCT+GGG | - | chr6_2:16781978-16781997 | Msa0911100:intron | 45.0% |
| TGGGCTTGATCATGGAACAT+GGG | - | chr6_2:16782030-16782049 | Msa0911100:intron | 45.0% | |
| !! | GATGAGGGTGTTCTGATACT+CGG | - | chr6_2:16782169-16782188 | Msa0911100:intron | 45.0% |
| ! | AACTACTGTCCTGTTCTGAG+TGG | + | chr6_2:16782206-16782225 | None:intergenic | 45.0% |
| ATGAGCCCACTTTGCATATG+GGG | + | chr6_2:16782489-16782508 | None:intergenic | 45.0% | |
| GATGAGCCCACTTTGCATAT+GGG | + | chr6_2:16782490-16782509 | None:intergenic | 45.0% | |
| GGAAATAAGTGATCAGGCCA+TGG | + | chr6_2:16782512-16782531 | None:intergenic | 45.0% | |
| CCAGCTATCATGGACAACTT+TGG | + | chr6_2:16782576-16782595 | None:intergenic | 45.0% | |
| CCAAAGTTGTCCATGATAGC+TGG | - | chr6_2:16782573-16782592 | Msa0911100:CDS | 45.0% | |
| AACCAAGATCCCAGCTATCA+TGG | + | chr6_2:16782586-16782605 | None:intergenic | 45.0% | |
| ACAAGCTGCTGTGAAACCAA+AGG | + | chr6_2:16782624-16782643 | None:intergenic | 45.0% | |
| AGAATGGAAGAGGGTCTTTC+AGG | + | chr6_2:16780727-16780746 | None:intergenic | 45.0% | |
| AACGTTGACGGTTGGAACTA+AGG | + | chr6_2:16780773-16780792 | None:intergenic | 45.0% | |
| TGATCAACAACGTTGACGGT+TGG | + | chr6_2:16780781-16780800 | None:intergenic | 45.0% | |
| AAACCTTGTTCAAGCTGCTG+GGG | + | chr6_2:16780834-16780853 | None:intergenic | 45.0% | |
| CAAACCTTGTTCAAGCTGCT+GGG | + | chr6_2:16780835-16780854 | None:intergenic | 45.0% | |
| ACAAACCTTGTTCAAGCTGC+TGG | + | chr6_2:16780836-16780855 | None:intergenic | 45.0% | |
| TCACAGCCGAACTCAACATT+AGG | - | chr6_2:16781641-16781660 | Msa0911100:intron | 45.0% | |
| ! | TTTGCTAACTTTGGTGCACC+TGG | + | chr6_2:16781950-16781969 | None:intergenic | 45.0% |
| GTGCACCAAAGTTAGCAAAG+AGG | - | chr6_2:16781951-16781970 | Msa0911100:intron | 45.0% | |
| ! | AAGGAACTTATCGAAGCGTC+TGG | - | chr6_2:16781977-16781996 | Msa0911100:intron | 45.0% |
| ! | AGGAACTTATCGAAGCGTCT+GGG | - | chr6_2:16781978-16781997 | Msa0911100:intron | 45.0% |
| TGGGCTTGATCATGGAACAT+GGG | - | chr6_2:16782030-16782049 | Msa0911100:intron | 45.0% | |
| !! | GATGAGGGTGTTCTGATACT+CGG | - | chr6_2:16782169-16782188 | Msa0911100:intron | 45.0% |
| ! | AACTACTGTCCTGTTCTGAG+TGG | + | chr6_2:16782206-16782225 | None:intergenic | 45.0% |
| ATGAGCCCACTTTGCATATG+GGG | + | chr6_2:16782489-16782508 | None:intergenic | 45.0% | |
| GATGAGCCCACTTTGCATAT+GGG | + | chr6_2:16782490-16782509 | None:intergenic | 45.0% | |
| GGAAATAAGTGATCAGGCCA+TGG | + | chr6_2:16782512-16782531 | None:intergenic | 45.0% | |
| CCAGCTATCATGGACAACTT+TGG | + | chr6_2:16782576-16782595 | None:intergenic | 45.0% | |
| CCAAAGTTGTCCATGATAGC+TGG | - | chr6_2:16782573-16782592 | Msa0911100:CDS | 45.0% | |
| AACCAAGATCCCAGCTATCA+TGG | + | chr6_2:16782586-16782605 | None:intergenic | 45.0% | |
| ACAAGCTGCTGTGAAACCAA+AGG | + | chr6_2:16782624-16782643 | None:intergenic | 45.0% | |
| !!! | ATGAATTTTTATATTTTTTA+CGG | + | chr6_2:16781222-16781241 | None:intergenic | 5.0% |
| !!! | TTAAAAAATTCTAATTTTTT+TGG | - | chr6_2:16781259-16781278 | Msa0911100:CDS | 5.0% |
| !!! | TAAAAAATTCTAATTTTTTT+GGG | - | chr6_2:16781260-16781279 | Msa0911100:CDS | 5.0% |
| !! | AAAAAAACTATTAAAATTAA+GGG | + | chr6_2:16781479-16781498 | None:intergenic | 5.0% |
| !! | TAAAAAAACTATTAAAATTA+AGG | + | chr6_2:16781480-16781499 | None:intergenic | 5.0% |
| !!! | ATGAATTTTTATATTTTTTA+CGG | + | chr6_2:16781222-16781241 | None:intergenic | 5.0% |
| !!! | TTAAAAAATTCTAATTTTTT+TGG | - | chr6_2:16781259-16781278 | Msa0911100:CDS | 5.0% |
| !!! | TAAAAAATTCTAATTTTTTT+GGG | - | chr6_2:16781260-16781279 | Msa0911100:CDS | 5.0% |
| !! | AAAAAAACTATTAAAATTAA+GGG | + | chr6_2:16781479-16781498 | None:intergenic | 5.0% |
| !! | TAAAAAAACTATTAAAATTA+AGG | + | chr6_2:16781480-16781499 | None:intergenic | 5.0% |
| !! | GCAAGTGTTGGTGTACCATG+TGG | + | chr6_2:16780649-16780668 | None:intergenic | 50.0% |
| CAGCTCAAATATCCAGCACC+AGG | - | chr6_2:16781929-16781948 | Msa0911100:intron | 50.0% | |
| GTGGGCTTGATCATGGAACA+TGG | - | chr6_2:16782029-16782048 | Msa0911100:intron | 50.0% | |
| CACACTGGTATATCAGCCTC+TGG | + | chr6_2:16782076-16782095 | None:intergenic | 50.0% | |
| GGTGTTCTGATACTCGGATC+CGG | - | chr6_2:16782175-16782194 | Msa0911100:intron | 50.0% | |
| ! | CCTGTTCTGAGTGGCATTTC+CGG | + | chr6_2:16782197-16782216 | None:intergenic | 50.0% |
| AATTCAACAGCCCAGGGATG+AGG | + | chr6_2:16782247-16782266 | None:intergenic | 50.0% | |
| AGAAGGCCCCATATGCAAAG+TGG | - | chr6_2:16782480-16782499 | Msa0911100:CDS | 50.0% | |
| GAAGGCCCCATATGCAAAGT+GGG | - | chr6_2:16782481-16782500 | Msa0911100:CDS | 50.0% | |
| GGATGAGCCCACTTTGCATA+TGG | + | chr6_2:16782491-16782510 | None:intergenic | 50.0% | |
| ! | ATGCAAAGTGGGCTCATCCA+TGG | - | chr6_2:16782492-16782511 | Msa0911100:CDS | 50.0% |
| GCTCCCATAGCTACATGCAA+TGG | + | chr6_2:16782533-16782552 | None:intergenic | 50.0% | |
| GTCCATGATAGCTGGGATCT+TGG | - | chr6_2:16782581-16782600 | Msa0911100:CDS | 50.0% | |
| !! | GCAAGTGTTGGTGTACCATG+TGG | + | chr6_2:16780649-16780668 | None:intergenic | 50.0% |
| CAGCTCAAATATCCAGCACC+AGG | - | chr6_2:16781929-16781948 | Msa0911100:intron | 50.0% | |
| GTGGGCTTGATCATGGAACA+TGG | - | chr6_2:16782029-16782048 | Msa0911100:intron | 50.0% | |
| CACACTGGTATATCAGCCTC+TGG | + | chr6_2:16782076-16782095 | None:intergenic | 50.0% | |
| GGTGTTCTGATACTCGGATC+CGG | - | chr6_2:16782175-16782194 | Msa0911100:intron | 50.0% | |
| ! | CCTGTTCTGAGTGGCATTTC+CGG | + | chr6_2:16782197-16782216 | None:intergenic | 50.0% |
| AATTCAACAGCCCAGGGATG+AGG | + | chr6_2:16782247-16782266 | None:intergenic | 50.0% | |
| AGAAGGCCCCATATGCAAAG+TGG | - | chr6_2:16782480-16782499 | Msa0911100:CDS | 50.0% | |
| GAAGGCCCCATATGCAAAGT+GGG | - | chr6_2:16782481-16782500 | Msa0911100:CDS | 50.0% | |
| GGATGAGCCCACTTTGCATA+TGG | + | chr6_2:16782491-16782510 | None:intergenic | 50.0% | |
| ! | ATGCAAAGTGGGCTCATCCA+TGG | - | chr6_2:16782492-16782511 | Msa0911100:CDS | 50.0% |
| GCTCCCATAGCTACATGCAA+TGG | + | chr6_2:16782533-16782552 | None:intergenic | 50.0% | |
| GTCCATGATAGCTGGGATCT+TGG | - | chr6_2:16782581-16782600 | Msa0911100:CDS | 50.0% | |
| CTTCCCCAGCAGCTTGAACA+AGG | - | chr6_2:16780828-16780847 | Msa0911100:intron | 55.0% | |
| ! | AACTTTGGTGCACCTGGTGC+TGG | + | chr6_2:16781944-16781963 | None:intergenic | 55.0% |
| CCGGAAATGCCACTCAGAAC+AGG | - | chr6_2:16782194-16782213 | Msa0911100:intron | 55.0% | |
| CATGTAGCTATGGGAGCTGC+TGG | - | chr6_2:16782536-16782555 | Msa0911100:CDS | 55.0% | |
| CTTCCCCAGCAGCTTGAACA+AGG | - | chr6_2:16780828-16780847 | Msa0911100:intron | 55.0% | |
| ! | AACTTTGGTGCACCTGGTGC+TGG | + | chr6_2:16781944-16781963 | None:intergenic | 55.0% |
| CCGGAAATGCCACTCAGAAC+AGG | - | chr6_2:16782194-16782213 | Msa0911100:intron | 55.0% | |
| CATGTAGCTATGGGAGCTGC+TGG | - | chr6_2:16782536-16782555 | Msa0911100:CDS | 55.0% | |
| ! | CGAAGCGTCTGGGTTGAGTC+AGG | - | chr6_2:16781988-16782007 | Msa0911100:intron | 60.0% |
| CGAAAGCCCTCCTCATCCCT+GGG | - | chr6_2:16782234-16782253 | Msa0911100:intron | 60.0% | |
| CAACAGCCCAGGGATGAGGA+GGG | + | chr6_2:16782243-16782262 | None:intergenic | 60.0% | |
| TCAACAGCCCAGGGATGAGG+AGG | + | chr6_2:16782244-16782263 | None:intergenic | 60.0% | |
| ! | CGAAGCGTCTGGGTTGAGTC+AGG | - | chr6_2:16781988-16782007 | Msa0911100:intron | 60.0% |
| CGAAAGCCCTCCTCATCCCT+GGG | - | chr6_2:16782234-16782253 | Msa0911100:intron | 60.0% | |
| CAACAGCCCAGGGATGAGGA+GGG | + | chr6_2:16782243-16782262 | None:intergenic | 60.0% | |
| TCAACAGCCCAGGGATGAGG+AGG | + | chr6_2:16782244-16782263 | None:intergenic | 60.0% | |
| GGATGAGGAGGGCTTTCGCG+AGG | + | chr6_2:16782232-16782251 | None:intergenic | 65.0% | |
| GCGAAAGCCCTCCTCATCCC+TGG | - | chr6_2:16782233-16782252 | Msa0911100:intron | 65.0% | |
| GGATGAGGAGGGCTTTCGCG+AGG | + | chr6_2:16782232-16782251 | None:intergenic | 65.0% | |
| GCGAAAGCCCTCCTCATCCC+TGG | - | chr6_2:16782233-16782252 | Msa0911100:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 16780619 | 16782649 | 16780619 | ID=Msa0911100;Name=Msa0911100 |
| chr6_2 | mRNA | 16780619 | 16782649 | 16780619 | ID=Msa0911100-mRNA-1;Parent=Msa0911100;Name=Msa0911100-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|1|1|3|0|265 |
| chr6_2 | exon | 16782419 | 16782649 | 16782419 | ID=Msa0911100-mRNA-1:exon:3636;Parent=Msa0911100-mRNA-1 |
| chr6_2 | exon | 16780966 | 16781336 | 16780966 | ID=Msa0911100-mRNA-1:exon:3635;Parent=Msa0911100-mRNA-1 |
| chr6_2 | exon | 16780619 | 16780814 | 16780619 | ID=Msa0911100-mRNA-1:exon:3634;Parent=Msa0911100-mRNA-1 |
| chr6_2 | CDS | 16782419 | 16782649 | 16782419 | ID=Msa0911100-mRNA-1:cds;Parent=Msa0911100-mRNA-1 |
| chr6_2 | CDS | 16780966 | 16781336 | 16780966 | ID=Msa0911100-mRNA-1:cds;Parent=Msa0911100-mRNA-1 |
| chr6_2 | CDS | 16780619 | 16780814 | 16780619 | ID=Msa0911100-mRNA-1:cds;Parent=Msa0911100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
