Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0985770 | XP_013468810.2 | 83.396 | 265 | 44 | 0 | 1 | 265 | 25 | 289 | 1.11e-165 | 470 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0985770 | sp|Q70FG7|DODA_BETVU | 60.920 | 261 | 101 | 1 | 3 | 262 | 7 | 267 | 3.41e-118 | 342 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0985770 | A0A396JW51 | 83.396 | 265 | 44 | 0 | 1 | 265 | 25 | 289 | 5.28e-166 | 470 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0814230 | Msa0985770 | 0.801409 | 9.128178e-49 | -8.615850e-47 |
| Msa0587920 | Msa0985770 | 0.801838 | 7.452607e-49 | -8.615850e-47 |
| Msa0911100 | Msa0985770 | 0.960419 | 1.548374e-118 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0985770 | MtrunA17_Chr1g0188451 | 83.396 | 265 | 44 | 0 | 1 | 265 | 25 | 289 | 1.02e-169 | 470 |
| Msa0985770 | MtrunA17_Chr6g0477101 | 67.416 | 267 | 84 | 3 | 1 | 265 | 1 | 266 | 4.73e-133 | 376 |
| Msa0985770 | MtrunA17_Chr6g0464111 | 85.616 | 146 | 20 | 1 | 121 | 265 | 1 | 146 | 8.90e-91 | 265 |
| Msa0985770 | MtrunA17_Chr6g0464101 | 73.077 | 52 | 9 | 1 | 64 | 110 | 18 | 69 | 7.91e-16 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0985770 | AT4G15093.1 | 61.961 | 255 | 93 | 3 | 3 | 253 | 4 | 258 | 2.60e-116 | 334 |
Find 79 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTGTTCTGAGTGGCATTTC+CGG | 0.192956 | 6_4:-32826700 | None:intergenic |
| AGAATGGAAGAGGGTCTTTC+AGG | 0.275383 | 6_4:-32825234 | None:intergenic |
| TTCTTGTTATCTCTGCTCAT+TGG | 0.308154 | 6_4:+32825253 | Msa0985770:CDS |
| TGCAGGAGTTGTTTCATCTA+TGG | 0.314245 | 6_4:-32825178 | None:intergenic |
| GGGCTGTTGAATTTATTTCC+TGG | 0.327296 | 6_4:+32826760 | Msa0985770:CDS |
| GCGAAAGCCCTCCTCATCCC+TGG | 0.349166 | 6_4:+32826739 | Msa0985770:CDS |
| TTCACCCTCTTTGCTAACTT+TGG | 0.380034 | 6_4:-32826462 | None:intergenic |
| CATGGAAGTTCTTTAAATCA+TGG | 0.381837 | 6_4:+32825199 | Msa0985770:CDS |
| TCTTGTTATCTCTGCTCATT+GGG | 0.388123 | 6_4:+32825254 | Msa0985770:CDS |
| AACTTTGGTGCACCTGGTGC+TGG | 0.390270 | 6_4:-32826447 | None:intergenic |
| GTCCATGATAGCTGGGATCT+TGG | 0.392358 | 6_4:+32827130 | Msa0985770:CDS |
| GGATGAGCCCACTTTGCATA+TGG | 0.398584 | 6_4:-32827037 | None:intergenic |
| GAAACCATGTATGACTTTCA+AGG | 0.404386 | 6_4:+32825315 | Msa0985770:CDS |
| ACAAACCTTGTTCAAGCTGC+TGG | 0.406394 | 6_4:-32825343 | None:intergenic |
| ATTTCCATTGCATGTAGCTA+TGG | 0.413445 | 6_4:+32827075 | Msa0985770:CDS |
| TTTGCTAACTTTGGTGCACC+TGG | 0.425639 | 6_4:-32826453 | None:intergenic |
| AAGGAACTTATCGAAGCGTC+TGG | 0.430194 | 6_4:+32826483 | Msa0985770:CDS |
| GGTACTTACCATTATAACTT+AGG | 0.430513 | 6_4:+32826630 | Msa0985770:CDS |
| CCAAAGTTGTCCATGATAGC+TGG | 0.432727 | 6_4:+32827122 | Msa0985770:CDS |
| AACGTTGACGGTTGGAACTA+AGG | 0.447360 | 6_4:-32825280 | None:intergenic |
| TCTGGATACATCAACATTAG+AGG | 0.447942 | 6_4:-32826561 | None:intergenic |
| TGCAATGGAAATAAGTGATC+AGG | 0.452909 | 6_4:-32827064 | None:intergenic |
| AATACACAAAATGGCATTGA+AGG | 0.455237 | 6_4:+32825119 | None:intergenic |
| TCTGTTTCAACAAATAGAAA+TGG | 0.455735 | 6_4:+32826609 | Msa0985770:CDS |
| CGAAGCGTCTGGGTTGAGTC+AGG | 0.477654 | 6_4:+32826494 | Msa0985770:CDS |
| TTTCCATTGCATGTAGCTAT+GGG | 0.479050 | 6_4:+32827076 | Msa0985770:CDS |
| CCGGAAATGCCACTCAGAAC+AGG | 0.484192 | 6_4:+32826700 | Msa0985770:CDS |
| AGAACACCCTCATCTTTAAG+AGG | 0.486129 | 6_4:-32826666 | None:intergenic |
| GTTCTTTAAATCATGGAAAG+AGG | 0.487815 | 6_4:+32825206 | Msa0985770:CDS |
| CAAACCTTGTTCAAGCTGCT+GGG | 0.488050 | 6_4:-32825342 | None:intergenic |
| ATTGTGATCAACAACGTTGA+CGG | 0.488252 | 6_4:-32825292 | None:intergenic |
| GGAAATAAATTCAACAGCCC+AGG | 0.490345 | 6_4:-32826757 | None:intergenic |
| CCAGCTATCATGGACAACTT+TGG | 0.490808 | 6_4:-32827122 | None:intergenic |
| GATGAGCCCACTTTGCATAT+GGG | 0.491858 | 6_4:-32827036 | None:intergenic |
| AATTCAACAGCCCAGGGATG+AGG | 0.500569 | 6_4:-32826750 | None:intergenic |
| AACCAAGATCCCAGCTATCA+TGG | 0.503856 | 6_4:-32827132 | None:intergenic |
| CGAAAGCCCTCCTCATCCCT+GGG | 0.506364 | 6_4:+32826740 | Msa0985770:CDS |
| CTTCCCCAGCAGCTTGAACA+AGG | 0.506964 | 6_4:+32825338 | Msa0985770:CDS |
| ATGAGCAGAGATAACAAGAA+TGG | 0.512163 | 6_4:-32825250 | None:intergenic |
| AGAGATAACAAGAATGGAAG+AGG | 0.517098 | 6_4:-32825244 | None:intergenic |
| TGATCAACAACGTTGACGGT+TGG | 0.532367 | 6_4:-32825288 | None:intergenic |
| GCTCCCATAGCTACATGCAA+TGG | 0.538842 | 6_4:-32827079 | None:intergenic |
| CACACTGGTATATCAGCCTC+TGG | 0.540607 | 6_4:-32826579 | None:intergenic |
| CATGTAGCTATGGGAGCTGC+TGG | 0.542879 | 6_4:+32827085 | Msa0985770:CDS |
| CAGCTCAAATATCCAGCACC+AGG | 0.547966 | 6_4:+32826435 | Msa0985770:intron |
| CAAAGTTGTCCATGATAGCT+GGG | 0.549127 | 6_4:+32827123 | Msa0985770:CDS |
| TGCACCAAAGTTAGCAAAGA+GGG | 0.552440 | 6_4:+32826458 | Msa0985770:CDS |
| GGTGTTCTGATACTCGGATC+CGG | 0.552759 | 6_4:+32826681 | Msa0985770:CDS |
| GGAAATAAGTGATCAGGCCA+TGG | 0.555253 | 6_4:-32827058 | None:intergenic |
| ATGAGCCCACTTTGCATATG+GGG | 0.560161 | 6_4:-32827035 | None:intergenic |
| GATGAGGGTGTTCTGATACT+CGG | 0.566930 | 6_4:+32826675 | Msa0985770:CDS |
| GTTTCATCTATGGCAAGCGT+TGG | 0.567052 | 6_4:-32825168 | None:intergenic |
| TCAACAGCCCAGGGATGAGG+AGG | 0.568161 | 6_4:-32826747 | None:intergenic |
| AGCTGCTGGTGAAAATTCAA+AGG | 0.578264 | 6_4:+32827099 | Msa0985770:CDS |
| TGTAAATCGTTATGAAGAGA+AGG | 0.579486 | 6_4:+32827012 | Msa0985770:CDS |
| GATTTAAAGAACTTCCATGC+AGG | 0.581374 | 6_4:-32825195 | None:intergenic |
| ATGCAAAGTGGGCTCATCCA+TGG | 0.582793 | 6_4:+32827041 | Msa0985770:CDS |
| AAACCTTGTTCAAGCTGCTG+GGG | 0.587139 | 6_4:-32825341 | None:intergenic |
| ATTAGCTCCTCTTAAAGATG+AGG | 0.591047 | 6_4:+32826659 | Msa0985770:CDS |
| AAAATTCTCTCATCGAAGGA+AGG | 0.596245 | 6_4:+32826787 | Msa0985770:CDS |
| GAAGGCCCCATATGCAAAGT+GGG | 0.603034 | 6_4:+32827030 | Msa0985770:CDS |
| TAGATGAAACAACTCCTGCA+TGG | 0.611109 | 6_4:+32825181 | Msa0985770:CDS |
| GAAATAAATTCAACAGCCCA+GGG | 0.611787 | 6_4:-32826756 | None:intergenic |
| GAAGCCTTGAAAGTCATACA+TGG | 0.614369 | 6_4:-32825319 | None:intergenic |
| GGATGAGGAGGGCTTTCGCG+AGG | 0.616852 | 6_4:-32826735 | None:intergenic |
| TTAGCTCCTCTTAAAGATGA+GGG | 0.624747 | 6_4:+32826660 | Msa0985770:CDS |
| AGAAGGCCCCATATGCAAAG+TGG | 0.631427 | 6_4:+32827029 | Msa0985770:CDS |
| AAAGTTAGCAAAGAGGGTGA+AGG | 0.634969 | 6_4:+32826464 | Msa0985770:CDS |
| GAGATAACAAGAATGGAAGA+GGG | 0.635486 | 6_4:-32825243 | None:intergenic |
| AGGAACTTATCGAAGCGTCT+GGG | 0.635683 | 6_4:+32826484 | Msa0985770:CDS |
| GTGGGCTTGATCATGGAACA+TGG | 0.640571 | 6_4:+32826535 | Msa0985770:CDS |
| GAAACAGATAGTTGACACAC+TGG | 0.645189 | 6_4:-32826594 | None:intergenic |
| ACAAGCTGCTGTGAAACCAA+AGG | 0.651065 | 6_4:-32827170 | None:intergenic |
| CAACAGCCCAGGGATGAGGA+GGG | 0.651220 | 6_4:-32826746 | None:intergenic |
| GTGCACCAAAGTTAGCAAAG+AGG | 0.686066 | 6_4:+32826457 | Msa0985770:CDS |
| AACTACTGTCCTGTTCTGAG+TGG | 0.690045 | 6_4:-32826709 | None:intergenic |
| TCTAATGTTGATGTATCCAG+AGG | 0.716219 | 6_4:+32826563 | Msa0985770:CDS |
| TGGGCTTGATCATGGAACAT+GGG | 0.724784 | 6_4:+32826536 | Msa0985770:CDS |
| GCAAGCGTTGGTGTACCATG+TGG | 0.778075 | 6_4:-32825156 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATTCCTTATTTAAAATA+GGG | + | chr6_4:32825467-32825486 | Msa0985770:intron | 10.0% |
| !! | GAAAAATTGATATATTTATA+GGG | + | chr6_4:32825945-32825964 | Msa0985770:intron | 10.0% |
| !!! | TTTATTCCTTATTTAAAATA+GGG | + | chr6_4:32825467-32825486 | Msa0985770:intron | 10.0% |
| !! | GAAAAATTGATATATTTATA+GGG | + | chr6_4:32825945-32825964 | Msa0985770:intron | 10.0% |
| !!! | GTTTATTCCTTATTTAAAAT+AGG | + | chr6_4:32825466-32825485 | Msa0985770:intron | 15.0% |
| !!! | ATTTAACCCTATTTTAAATA+AGG | - | chr6_4:32825476-32825495 | None:intergenic | 15.0% |
| !!! | TAGTGATTGAAAATTTTATA+GGG | - | chr6_4:32825570-32825589 | None:intergenic | 15.0% |
| !!! | TGAAGATTGAAAATTTTATA+GGG | + | chr6_4:32825885-32825904 | Msa0985770:intron | 15.0% |
| !! | CGAAAAATTGATATATTTAT+AGG | + | chr6_4:32825944-32825963 | Msa0985770:intron | 15.0% |
| !! | ATTCAAATCTCATTTAATTA+GGG | - | chr6_4:32826044-32826063 | None:intergenic | 15.0% |
| !! | AATTCAAATCTCATTTAATT+AGG | - | chr6_4:32826045-32826064 | None:intergenic | 15.0% |
| !! | TAAACTATTGAAATCTAATT+TGG | + | chr6_4:32826233-32826252 | Msa0985770:intron | 15.0% |
| !! | AAACTATTGAAATCTAATTT+GGG | + | chr6_4:32826234-32826253 | Msa0985770:intron | 15.0% |
| !!! | GTTTATTCCTTATTTAAAAT+AGG | + | chr6_4:32825466-32825485 | Msa0985770:intron | 15.0% |
| !!! | ATTTAACCCTATTTTAAATA+AGG | - | chr6_4:32825476-32825495 | None:intergenic | 15.0% |
| !!! | TAGTGATTGAAAATTTTATA+GGG | - | chr6_4:32825570-32825589 | None:intergenic | 15.0% |
| !!! | TGAAGATTGAAAATTTTATA+GGG | + | chr6_4:32825885-32825904 | Msa0985770:intron | 15.0% |
| !! | CGAAAAATTGATATATTTAT+AGG | + | chr6_4:32825944-32825963 | Msa0985770:intron | 15.0% |
| !! | ATTCAAATCTCATTTAATTA+GGG | - | chr6_4:32826044-32826063 | None:intergenic | 15.0% |
| !! | AATTCAAATCTCATTTAATT+AGG | - | chr6_4:32826045-32826064 | None:intergenic | 15.0% |
| !! | TAAACTATTGAAATCTAATT+TGG | + | chr6_4:32826233-32826252 | Msa0985770:intron | 15.0% |
| !! | AAACTATTGAAATCTAATTT+GGG | + | chr6_4:32826234-32826253 | Msa0985770:intron | 15.0% |
| !! | TCAATGATGTATTTAAACAT+GGG | + | chr6_4:32825399-32825418 | Msa0985770:intron | 20.0% |
| !! | GAAAAGTTGACATATTTATA+AGG | - | chr6_4:32825510-32825529 | None:intergenic | 20.0% |
| !!! | GTAGTGATTGAAAATTTTAT+AGG | - | chr6_4:32825571-32825590 | None:intergenic | 20.0% |
| !!! | AAATTTTCAATCACTACTTT+TGG | + | chr6_4:32825574-32825593 | Msa0985770:intron | 20.0% |
| !!! | GAGTTATTCTTATGATATTT+TGG | + | chr6_4:32825790-32825809 | Msa0985770:intron | 20.0% |
| !!! | TATGATATTTTGGATTTTTC+TGG | + | chr6_4:32825800-32825819 | Msa0985770:intron | 20.0% |
| !!! | ATATGAGTTTACTTTAAAAG+AGG | + | chr6_4:32825853-32825872 | Msa0985770:intron | 20.0% |
| !!! | TATGAGTTTACTTTAAAAGA+GGG | + | chr6_4:32825854-32825873 | Msa0985770:intron | 20.0% |
| !!! | AAATTTTCAATCTTCACTTT+TGG | - | chr6_4:32825881-32825900 | None:intergenic | 20.0% |
| !!! | GTGAAGATTGAAAATTTTAT+AGG | + | chr6_4:32825884-32825903 | Msa0985770:intron | 20.0% |
| !!! | TAAAATTTTCCTTCAACTTT+TGG | - | chr6_4:32825543-32825562 | None:intergenic | 20.0% |
| !! | AAATAATCATTATTTGAACC+CGG | + | chr6_4:32826203-32826222 | Msa0985770:intron | 20.0% |
| !! | TTCAATAGTTTATTAGAATC+CGG | - | chr6_4:32826225-32826244 | None:intergenic | 20.0% |
| !! | AATTATTTGTTCCTAAACTT+AGG | - | chr6_4:32826291-32826310 | None:intergenic | 20.0% |
| !! | TCAATGATGTATTTAAACAT+GGG | + | chr6_4:32825399-32825418 | Msa0985770:intron | 20.0% |
| !! | GAAAAGTTGACATATTTATA+AGG | - | chr6_4:32825510-32825529 | None:intergenic | 20.0% |
| !!! | GTAGTGATTGAAAATTTTAT+AGG | - | chr6_4:32825571-32825590 | None:intergenic | 20.0% |
| !!! | AAATTTTCAATCACTACTTT+TGG | + | chr6_4:32825574-32825593 | Msa0985770:intron | 20.0% |
| !!! | GAGTTATTCTTATGATATTT+TGG | + | chr6_4:32825790-32825809 | Msa0985770:intron | 20.0% |
| !!! | TATGATATTTTGGATTTTTC+TGG | + | chr6_4:32825800-32825819 | Msa0985770:intron | 20.0% |
| !!! | ATATGAGTTTACTTTAAAAG+AGG | + | chr6_4:32825853-32825872 | Msa0985770:intron | 20.0% |
| !!! | TATGAGTTTACTTTAAAAGA+GGG | + | chr6_4:32825854-32825873 | Msa0985770:intron | 20.0% |
| !!! | AAATTTTCAATCTTCACTTT+TGG | - | chr6_4:32825881-32825900 | None:intergenic | 20.0% |
| !!! | GTGAAGATTGAAAATTTTAT+AGG | + | chr6_4:32825884-32825903 | Msa0985770:intron | 20.0% |
| !!! | TAAAATTTTCCTTCAACTTT+TGG | - | chr6_4:32825543-32825562 | None:intergenic | 20.0% |
| !! | AAATAATCATTATTTGAACC+CGG | + | chr6_4:32826203-32826222 | Msa0985770:intron | 20.0% |
| !! | TTCAATAGTTTATTAGAATC+CGG | - | chr6_4:32826225-32826244 | None:intergenic | 20.0% |
| !! | AATTATTTGTTCCTAAACTT+AGG | - | chr6_4:32826291-32826310 | None:intergenic | 20.0% |
| ! | GTCAATGATGTATTTAAACA+TGG | + | chr6_4:32825398-32825417 | Msa0985770:intron | 25.0% |
| !! | TAAAATGTCCCAATTTTGTA+GGG | - | chr6_4:32825445-32825464 | None:intergenic | 25.0% |
| !! | TTAAAATGTCCCAATTTTGT+AGG | - | chr6_4:32825446-32825465 | None:intergenic | 25.0% |
| !! | AGTTGAAGGAAAATTTTAGA+AGG | - | chr6_4:32825914-32825933 | None:intergenic | 25.0% |
| !! | AAGTTGAAGGAAAATTTTAG+AGG | + | chr6_4:32825913-32825932 | Msa0985770:intron | 25.0% |
| !! | AGTTGAAGGAAAATTTTAGA+GGG | + | chr6_4:32825914-32825933 | Msa0985770:intron | 25.0% |
| ! | TTTAATTAGGGACTAAAACT+GGG | - | chr6_4:32826032-32826051 | None:intergenic | 25.0% |
| ! | ATTTAATTAGGGACTAAAAC+TGG | - | chr6_4:32826033-32826052 | None:intergenic | 25.0% |
| ! | ATTATTACAAACTCAAGGAA+TGG | - | chr6_4:32826068-32826087 | None:intergenic | 25.0% |
| ! | TGCATATTATTACAAACTCA+AGG | - | chr6_4:32826073-32826092 | None:intergenic | 25.0% |
| ! | TCAATAGTTTATTAGAATCC+GGG | - | chr6_4:32826224-32826243 | None:intergenic | 25.0% |
| ! | ACATAGGTACAAAAGAAAAA+GGG | - | chr6_4:32826393-32826412 | None:intergenic | 25.0% |
| !! | TCATTGAACTTGTTCTTTAT+TGG | + | chr6_4:32826412-32826431 | Msa0985770:intron | 25.0% |
| ! | TCTGTTTCAACAAATAGAAA+TGG | + | chr6_4:32826609-32826628 | Msa0985770:CDS | 25.0% |
| !! | ATGCTTTTCCTAAGTTATAA+TGG | - | chr6_4:32826641-32826660 | None:intergenic | 25.0% |
| ! | TTAAAAAATTCTCTCATCGA+AGG | + | chr6_4:32826783-32826802 | Msa0985770:CDS | 25.0% |
| ! | ATATCAGTGTTGTCAAATAA+TGG | + | chr6_4:32826848-32826867 | Msa0985770:intron | 25.0% |
| ! | ATTTGAATTCGAACAAACAA+TGG | + | chr6_4:32826888-32826907 | Msa0985770:intron | 25.0% |
| !! | TCTTTTTCTTATGTTTCCTT+TGG | + | chr6_4:32827154-32827173 | Msa0985770:CDS | 25.0% |
| ! | GTCAATGATGTATTTAAACA+TGG | + | chr6_4:32825398-32825417 | Msa0985770:intron | 25.0% |
| !! | TAAAATGTCCCAATTTTGTA+GGG | - | chr6_4:32825445-32825464 | None:intergenic | 25.0% |
| !! | TTAAAATGTCCCAATTTTGT+AGG | - | chr6_4:32825446-32825465 | None:intergenic | 25.0% |
| !! | AGTTGAAGGAAAATTTTAGA+AGG | - | chr6_4:32825914-32825933 | None:intergenic | 25.0% |
| !! | AAGTTGAAGGAAAATTTTAG+AGG | + | chr6_4:32825913-32825932 | Msa0985770:intron | 25.0% |
| !! | AGTTGAAGGAAAATTTTAGA+GGG | + | chr6_4:32825914-32825933 | Msa0985770:intron | 25.0% |
| ! | TTTAATTAGGGACTAAAACT+GGG | - | chr6_4:32826032-32826051 | None:intergenic | 25.0% |
| ! | ATTTAATTAGGGACTAAAAC+TGG | - | chr6_4:32826033-32826052 | None:intergenic | 25.0% |
| ! | ATTATTACAAACTCAAGGAA+TGG | - | chr6_4:32826068-32826087 | None:intergenic | 25.0% |
| ! | TGCATATTATTACAAACTCA+AGG | - | chr6_4:32826073-32826092 | None:intergenic | 25.0% |
| ! | TCAATAGTTTATTAGAATCC+GGG | - | chr6_4:32826224-32826243 | None:intergenic | 25.0% |
| ! | ACATAGGTACAAAAGAAAAA+GGG | - | chr6_4:32826393-32826412 | None:intergenic | 25.0% |
| !! | TCATTGAACTTGTTCTTTAT+TGG | + | chr6_4:32826412-32826431 | Msa0985770:intron | 25.0% |
| ! | TCTGTTTCAACAAATAGAAA+TGG | + | chr6_4:32826609-32826628 | Msa0985770:CDS | 25.0% |
| !! | ATGCTTTTCCTAAGTTATAA+TGG | - | chr6_4:32826641-32826660 | None:intergenic | 25.0% |
| ! | TTAAAAAATTCTCTCATCGA+AGG | + | chr6_4:32826783-32826802 | Msa0985770:CDS | 25.0% |
| ! | ATATCAGTGTTGTCAAATAA+TGG | + | chr6_4:32826848-32826867 | Msa0985770:intron | 25.0% |
| ! | ATTTGAATTCGAACAAACAA+TGG | + | chr6_4:32826888-32826907 | Msa0985770:intron | 25.0% |
| !! | TCTTTTTCTTATGTTTCCTT+TGG | + | chr6_4:32827154-32827173 | Msa0985770:CDS | 25.0% |
| ! | GAAACATTTTACATACCACA+TGG | + | chr6_4:32825141-32825160 | Msa0985770:CDS | 30.0% |
| CATGGAAGTTCTTTAAATCA+TGG | + | chr6_4:32825199-32825218 | Msa0985770:CDS | 30.0% | |
| GTTCTTTAAATCATGGAAAG+AGG | + | chr6_4:32825206-32825225 | Msa0985770:CDS | 30.0% | |
| TGTTTAAGTCCCTACAAAAT+TGG | + | chr6_4:32825433-32825452 | Msa0985770:intron | 30.0% | |
| GTTTAAGTCCCTACAAAATT+GGG | + | chr6_4:32825434-32825453 | Msa0985770:intron | 30.0% | |
| TTATAGGGACTAAAAGTTGA+AGG | - | chr6_4:32825555-32825574 | None:intergenic | 30.0% | |
| !!! | CTGGGTGCAATTTTTTTAAA+GGG | - | chr6_4:32826014-32826033 | None:intergenic | 30.0% |
| !!! | ACTGGGTGCAATTTTTTTAA+AGG | - | chr6_4:32826015-32826034 | None:intergenic | 30.0% |
| AAATAAGTAAAGTCTGACCA+CGG | - | chr6_4:32826130-32826149 | None:intergenic | 30.0% | |
| CTTTAGATATGCCTAAGTTT+AGG | + | chr6_4:32826277-32826296 | Msa0985770:intron | 30.0% | |
| GACATAGGTACAAAAGAAAA+AGG | - | chr6_4:32826394-32826413 | None:intergenic | 30.0% | |
| AAGAACAAGTTCAATGACAT+AGG | - | chr6_4:32826409-32826428 | None:intergenic | 30.0% | |
| TAGACGAAGATAAAAAACGT+GGG | + | chr6_4:32826517-32826536 | Msa0985770:CDS | 30.0% | |
| GGTACTTACCATTATAACTT+AGG | + | chr6_4:32826630-32826649 | Msa0985770:CDS | 30.0% | |
| !!! | GATGAGAGAATTTTTTAACC+AGG | - | chr6_4:32826781-32826800 | None:intergenic | 30.0% |
| TGTAAATCGTTATGAAGAGA+AGG | + | chr6_4:32827012-32827031 | Msa0985770:CDS | 30.0% | |
| ! | GAAACATTTTACATACCACA+TGG | + | chr6_4:32825141-32825160 | Msa0985770:CDS | 30.0% |
| CATGGAAGTTCTTTAAATCA+TGG | + | chr6_4:32825199-32825218 | Msa0985770:CDS | 30.0% | |
| GTTCTTTAAATCATGGAAAG+AGG | + | chr6_4:32825206-32825225 | Msa0985770:CDS | 30.0% | |
| TGTTTAAGTCCCTACAAAAT+TGG | + | chr6_4:32825433-32825452 | Msa0985770:intron | 30.0% | |
| GTTTAAGTCCCTACAAAATT+GGG | + | chr6_4:32825434-32825453 | Msa0985770:intron | 30.0% | |
| TTATAGGGACTAAAAGTTGA+AGG | - | chr6_4:32825555-32825574 | None:intergenic | 30.0% | |
| !!! | CTGGGTGCAATTTTTTTAAA+GGG | - | chr6_4:32826014-32826033 | None:intergenic | 30.0% |
| !!! | ACTGGGTGCAATTTTTTTAA+AGG | - | chr6_4:32826015-32826034 | None:intergenic | 30.0% |
| AAATAAGTAAAGTCTGACCA+CGG | - | chr6_4:32826130-32826149 | None:intergenic | 30.0% | |
| CTTTAGATATGCCTAAGTTT+AGG | + | chr6_4:32826277-32826296 | Msa0985770:intron | 30.0% | |
| GACATAGGTACAAAAGAAAA+AGG | - | chr6_4:32826394-32826413 | None:intergenic | 30.0% | |
| AAGAACAAGTTCAATGACAT+AGG | - | chr6_4:32826409-32826428 | None:intergenic | 30.0% | |
| TAGACGAAGATAAAAAACGT+GGG | + | chr6_4:32826517-32826536 | Msa0985770:CDS | 30.0% | |
| GGTACTTACCATTATAACTT+AGG | + | chr6_4:32826630-32826649 | Msa0985770:CDS | 30.0% | |
| !!! | GATGAGAGAATTTTTTAACC+AGG | - | chr6_4:32826781-32826800 | None:intergenic | 30.0% |
| TGTAAATCGTTATGAAGAGA+AGG | + | chr6_4:32827012-32827031 | Msa0985770:CDS | 30.0% | |
| GATTTAAAGAACTTCCATGC+AGG | - | chr6_4:32825198-32825217 | None:intergenic | 35.0% | |
| GAGATAACAAGAATGGAAGA+GGG | - | chr6_4:32825246-32825265 | None:intergenic | 35.0% | |
| AGAGATAACAAGAATGGAAG+AGG | - | chr6_4:32825247-32825266 | None:intergenic | 35.0% | |
| ATGAGCAGAGATAACAAGAA+TGG | - | chr6_4:32825253-32825272 | None:intergenic | 35.0% | |
| ! | TTCTTGTTATCTCTGCTCAT+TGG | + | chr6_4:32825253-32825272 | Msa0985770:CDS | 35.0% |
| ! | TCTTGTTATCTCTGCTCATT+GGG | + | chr6_4:32825254-32825273 | Msa0985770:CDS | 35.0% |
| ATTGTGATCAACAACGTTGA+CGG | - | chr6_4:32825295-32825314 | None:intergenic | 35.0% | |
| GAAACCATGTATGACTTTCA+AGG | + | chr6_4:32825315-32825334 | Msa0985770:CDS | 35.0% | |
| TTATAGGGACCAAAAGTTGA+AGG | + | chr6_4:32825900-32825919 | Msa0985770:intron | 35.0% | |
| TTCTTGCCTAATGTTGAGTT+CGG | - | chr6_4:32826158-32826177 | None:intergenic | 35.0% | |
| AAATCTATCCCACAAAGAAC+AGG | + | chr6_4:32826328-32826347 | Msa0985770:intron | 35.0% | |
| CTACATTTCCTGTTCTTTGT+GGG | - | chr6_4:32826339-32826358 | None:intergenic | 35.0% | |
| TCTACATTTCCTGTTCTTTG+TGG | - | chr6_4:32826340-32826359 | None:intergenic | 35.0% | |
| GTAGACGAAGATAAAAAACG+TGG | + | chr6_4:32826516-32826535 | Msa0985770:CDS | 35.0% | |
| TCTGGATACATCAACATTAG+AGG | - | chr6_4:32826564-32826583 | None:intergenic | 35.0% | |
| TCTAATGTTGATGTATCCAG+AGG | + | chr6_4:32826563-32826582 | Msa0985770:CDS | 35.0% | |
| ATTAGCTCCTCTTAAAGATG+AGG | + | chr6_4:32826659-32826678 | Msa0985770:CDS | 35.0% | |
| TTAGCTCCTCTTAAAGATGA+GGG | + | chr6_4:32826660-32826679 | Msa0985770:CDS | 35.0% | |
| GAAATAAATTCAACAGCCCA+GGG | - | chr6_4:32826759-32826778 | None:intergenic | 35.0% | |
| AAAATTCTCTCATCGAAGGA+AGG | + | chr6_4:32826787-32826806 | Msa0985770:CDS | 35.0% | |
| TGCAATGGAAATAAGTGATC+AGG | - | chr6_4:32827067-32827086 | None:intergenic | 35.0% | |
| ATTTCCATTGCATGTAGCTA+TGG | + | chr6_4:32827075-32827094 | Msa0985770:CDS | 35.0% | |
| TTTCCATTGCATGTAGCTAT+GGG | + | chr6_4:32827076-32827095 | Msa0985770:CDS | 35.0% | |
| GATTTAAAGAACTTCCATGC+AGG | - | chr6_4:32825198-32825217 | None:intergenic | 35.0% | |
| GAGATAACAAGAATGGAAGA+GGG | - | chr6_4:32825246-32825265 | None:intergenic | 35.0% | |
| AGAGATAACAAGAATGGAAG+AGG | - | chr6_4:32825247-32825266 | None:intergenic | 35.0% | |
| ATGAGCAGAGATAACAAGAA+TGG | - | chr6_4:32825253-32825272 | None:intergenic | 35.0% | |
| ! | TTCTTGTTATCTCTGCTCAT+TGG | + | chr6_4:32825253-32825272 | Msa0985770:CDS | 35.0% |
| ! | TCTTGTTATCTCTGCTCATT+GGG | + | chr6_4:32825254-32825273 | Msa0985770:CDS | 35.0% |
| ATTGTGATCAACAACGTTGA+CGG | - | chr6_4:32825295-32825314 | None:intergenic | 35.0% | |
| GAAACCATGTATGACTTTCA+AGG | + | chr6_4:32825315-32825334 | Msa0985770:CDS | 35.0% | |
| TTATAGGGACCAAAAGTTGA+AGG | + | chr6_4:32825900-32825919 | Msa0985770:intron | 35.0% | |
| TTCTTGCCTAATGTTGAGTT+CGG | - | chr6_4:32826158-32826177 | None:intergenic | 35.0% | |
| AAATCTATCCCACAAAGAAC+AGG | + | chr6_4:32826328-32826347 | Msa0985770:intron | 35.0% | |
| CTACATTTCCTGTTCTTTGT+GGG | - | chr6_4:32826339-32826358 | None:intergenic | 35.0% | |
| TCTACATTTCCTGTTCTTTG+TGG | - | chr6_4:32826340-32826359 | None:intergenic | 35.0% | |
| GTAGACGAAGATAAAAAACG+TGG | + | chr6_4:32826516-32826535 | Msa0985770:CDS | 35.0% | |
| TCTGGATACATCAACATTAG+AGG | - | chr6_4:32826564-32826583 | None:intergenic | 35.0% | |
| TCTAATGTTGATGTATCCAG+AGG | + | chr6_4:32826563-32826582 | Msa0985770:CDS | 35.0% | |
| ATTAGCTCCTCTTAAAGATG+AGG | + | chr6_4:32826659-32826678 | Msa0985770:CDS | 35.0% | |
| TTAGCTCCTCTTAAAGATGA+GGG | + | chr6_4:32826660-32826679 | Msa0985770:CDS | 35.0% | |
| GAAATAAATTCAACAGCCCA+GGG | - | chr6_4:32826759-32826778 | None:intergenic | 35.0% | |
| AAAATTCTCTCATCGAAGGA+AGG | + | chr6_4:32826787-32826806 | Msa0985770:CDS | 35.0% | |
| TGCAATGGAAATAAGTGATC+AGG | - | chr6_4:32827067-32827086 | None:intergenic | 35.0% | |
| ATTTCCATTGCATGTAGCTA+TGG | + | chr6_4:32827075-32827094 | Msa0985770:CDS | 35.0% | |
| TTTCCATTGCATGTAGCTAT+GGG | + | chr6_4:32827076-32827095 | Msa0985770:CDS | 35.0% | |
| ! | TGCAGGAGTTGTTTCATCTA+TGG | - | chr6_4:32825181-32825200 | None:intergenic | 40.0% |
| TAGATGAAACAACTCCTGCA+TGG | + | chr6_4:32825181-32825200 | Msa0985770:CDS | 40.0% | |
| GAAGCCTTGAAAGTCATACA+TGG | - | chr6_4:32825322-32825341 | None:intergenic | 40.0% | |
| GGCTGACTGAAACAATTTAG+AGG | - | chr6_4:32826109-32826128 | None:intergenic | 40.0% | |
| TAAATTGTTTCAGTCAGCCG+TGG | + | chr6_4:32826110-32826129 | Msa0985770:intron | 40.0% | |
| AACATTAGGCAAGAATCGCA+AGG | + | chr6_4:32826163-32826182 | Msa0985770:intron | 40.0% | |
| ! | TTTGGGCACAGTCTTACTTT+TGG | + | chr6_4:32826251-32826270 | Msa0985770:intron | 40.0% |
| TGCACCAAAGTTAGCAAAGA+GGG | + | chr6_4:32826458-32826477 | Msa0985770:CDS | 40.0% | |
| TTCACCCTCTTTGCTAACTT+TGG | - | chr6_4:32826465-32826484 | None:intergenic | 40.0% | |
| AAAGTTAGCAAAGAGGGTGA+AGG | + | chr6_4:32826464-32826483 | Msa0985770:CDS | 40.0% | |
| AAAAAACGTGGGCTTGATCA+TGG | + | chr6_4:32826528-32826547 | Msa0985770:CDS | 40.0% | |
| GAAACAGATAGTTGACACAC+TGG | - | chr6_4:32826597-32826616 | None:intergenic | 40.0% | |
| AGAACACCCTCATCTTTAAG+AGG | - | chr6_4:32826669-32826688 | None:intergenic | 40.0% | |
| GGAAATAAATTCAACAGCCC+AGG | - | chr6_4:32826760-32826779 | None:intergenic | 40.0% | |
| GGGCTGTTGAATTTATTTCC+TGG | + | chr6_4:32826760-32826779 | Msa0985770:CDS | 40.0% | |
| AGCTGCTGGTGAAAATTCAA+AGG | + | chr6_4:32827099-32827118 | Msa0985770:CDS | 40.0% | |
| CAAAGTTGTCCATGATAGCT+GGG | + | chr6_4:32827123-32827142 | Msa0985770:CDS | 40.0% | |
| ! | TGCAGGAGTTGTTTCATCTA+TGG | - | chr6_4:32825181-32825200 | None:intergenic | 40.0% |
| TAGATGAAACAACTCCTGCA+TGG | + | chr6_4:32825181-32825200 | Msa0985770:CDS | 40.0% | |
| GAAGCCTTGAAAGTCATACA+TGG | - | chr6_4:32825322-32825341 | None:intergenic | 40.0% | |
| GGCTGACTGAAACAATTTAG+AGG | - | chr6_4:32826109-32826128 | None:intergenic | 40.0% | |
| TAAATTGTTTCAGTCAGCCG+TGG | + | chr6_4:32826110-32826129 | Msa0985770:intron | 40.0% | |
| AACATTAGGCAAGAATCGCA+AGG | + | chr6_4:32826163-32826182 | Msa0985770:intron | 40.0% | |
| ! | TTTGGGCACAGTCTTACTTT+TGG | + | chr6_4:32826251-32826270 | Msa0985770:intron | 40.0% |
| TGCACCAAAGTTAGCAAAGA+GGG | + | chr6_4:32826458-32826477 | Msa0985770:CDS | 40.0% | |
| TTCACCCTCTTTGCTAACTT+TGG | - | chr6_4:32826465-32826484 | None:intergenic | 40.0% | |
| AAAGTTAGCAAAGAGGGTGA+AGG | + | chr6_4:32826464-32826483 | Msa0985770:CDS | 40.0% | |
| AAAAAACGTGGGCTTGATCA+TGG | + | chr6_4:32826528-32826547 | Msa0985770:CDS | 40.0% | |
| GAAACAGATAGTTGACACAC+TGG | - | chr6_4:32826597-32826616 | None:intergenic | 40.0% | |
| AGAACACCCTCATCTTTAAG+AGG | - | chr6_4:32826669-32826688 | None:intergenic | 40.0% | |
| GGAAATAAATTCAACAGCCC+AGG | - | chr6_4:32826760-32826779 | None:intergenic | 40.0% | |
| GGGCTGTTGAATTTATTTCC+TGG | + | chr6_4:32826760-32826779 | Msa0985770:CDS | 40.0% | |
| AGCTGCTGGTGAAAATTCAA+AGG | + | chr6_4:32827099-32827118 | Msa0985770:CDS | 40.0% | |
| CAAAGTTGTCCATGATAGCT+GGG | + | chr6_4:32827123-32827142 | Msa0985770:CDS | 40.0% | |
| GTTTCATCTATGGCAAGCGT+TGG | - | chr6_4:32825171-32825190 | None:intergenic | 45.0% | |
| AGAATGGAAGAGGGTCTTTC+AGG | - | chr6_4:32825237-32825256 | None:intergenic | 45.0% | |
| AACGTTGACGGTTGGAACTA+AGG | - | chr6_4:32825283-32825302 | None:intergenic | 45.0% | |
| TGATCAACAACGTTGACGGT+TGG | - | chr6_4:32825291-32825310 | None:intergenic | 45.0% | |
| AAACCTTGTTCAAGCTGCTG+GGG | - | chr6_4:32825344-32825363 | None:intergenic | 45.0% | |
| CAAACCTTGTTCAAGCTGCT+GGG | - | chr6_4:32825345-32825364 | None:intergenic | 45.0% | |
| ACAAACCTTGTTCAAGCTGC+TGG | - | chr6_4:32825346-32825365 | None:intergenic | 45.0% | |
| TCACAGCCGAACTCAACATT+AGG | + | chr6_4:32826149-32826168 | Msa0985770:intron | 45.0% | |
| ! | TTTGCTAACTTTGGTGCACC+TGG | - | chr6_4:32826456-32826475 | None:intergenic | 45.0% |
| GTGCACCAAAGTTAGCAAAG+AGG | + | chr6_4:32826457-32826476 | Msa0985770:CDS | 45.0% | |
| ! | AAGGAACTTATCGAAGCGTC+TGG | + | chr6_4:32826483-32826502 | Msa0985770:CDS | 45.0% |
| ! | AGGAACTTATCGAAGCGTCT+GGG | + | chr6_4:32826484-32826503 | Msa0985770:CDS | 45.0% |
| TGGGCTTGATCATGGAACAT+GGG | + | chr6_4:32826536-32826555 | Msa0985770:CDS | 45.0% | |
| !! | GATGAGGGTGTTCTGATACT+CGG | + | chr6_4:32826675-32826694 | Msa0985770:CDS | 45.0% |
| ! | AACTACTGTCCTGTTCTGAG+TGG | - | chr6_4:32826712-32826731 | None:intergenic | 45.0% |
| ATGAGCCCACTTTGCATATG+GGG | - | chr6_4:32827038-32827057 | None:intergenic | 45.0% | |
| GATGAGCCCACTTTGCATAT+GGG | - | chr6_4:32827039-32827058 | None:intergenic | 45.0% | |
| GGAAATAAGTGATCAGGCCA+TGG | - | chr6_4:32827061-32827080 | None:intergenic | 45.0% | |
| CCAGCTATCATGGACAACTT+TGG | - | chr6_4:32827125-32827144 | None:intergenic | 45.0% | |
| CCAAAGTTGTCCATGATAGC+TGG | + | chr6_4:32827122-32827141 | Msa0985770:CDS | 45.0% | |
| AACCAAGATCCCAGCTATCA+TGG | - | chr6_4:32827135-32827154 | None:intergenic | 45.0% | |
| ACAAGCTGCTGTGAAACCAA+AGG | - | chr6_4:32827173-32827192 | None:intergenic | 45.0% | |
| GTTTCATCTATGGCAAGCGT+TGG | - | chr6_4:32825171-32825190 | None:intergenic | 45.0% | |
| AGAATGGAAGAGGGTCTTTC+AGG | - | chr6_4:32825237-32825256 | None:intergenic | 45.0% | |
| AACGTTGACGGTTGGAACTA+AGG | - | chr6_4:32825283-32825302 | None:intergenic | 45.0% | |
| TGATCAACAACGTTGACGGT+TGG | - | chr6_4:32825291-32825310 | None:intergenic | 45.0% | |
| AAACCTTGTTCAAGCTGCTG+GGG | - | chr6_4:32825344-32825363 | None:intergenic | 45.0% | |
| CAAACCTTGTTCAAGCTGCT+GGG | - | chr6_4:32825345-32825364 | None:intergenic | 45.0% | |
| ACAAACCTTGTTCAAGCTGC+TGG | - | chr6_4:32825346-32825365 | None:intergenic | 45.0% | |
| TCACAGCCGAACTCAACATT+AGG | + | chr6_4:32826149-32826168 | Msa0985770:intron | 45.0% | |
| ! | TTTGCTAACTTTGGTGCACC+TGG | - | chr6_4:32826456-32826475 | None:intergenic | 45.0% |
| GTGCACCAAAGTTAGCAAAG+AGG | + | chr6_4:32826457-32826476 | Msa0985770:CDS | 45.0% | |
| ! | AAGGAACTTATCGAAGCGTC+TGG | + | chr6_4:32826483-32826502 | Msa0985770:CDS | 45.0% |
| ! | AGGAACTTATCGAAGCGTCT+GGG | + | chr6_4:32826484-32826503 | Msa0985770:CDS | 45.0% |
| TGGGCTTGATCATGGAACAT+GGG | + | chr6_4:32826536-32826555 | Msa0985770:CDS | 45.0% | |
| !! | GATGAGGGTGTTCTGATACT+CGG | + | chr6_4:32826675-32826694 | Msa0985770:CDS | 45.0% |
| ! | AACTACTGTCCTGTTCTGAG+TGG | - | chr6_4:32826712-32826731 | None:intergenic | 45.0% |
| ATGAGCCCACTTTGCATATG+GGG | - | chr6_4:32827038-32827057 | None:intergenic | 45.0% | |
| GATGAGCCCACTTTGCATAT+GGG | - | chr6_4:32827039-32827058 | None:intergenic | 45.0% | |
| GGAAATAAGTGATCAGGCCA+TGG | - | chr6_4:32827061-32827080 | None:intergenic | 45.0% | |
| CCAGCTATCATGGACAACTT+TGG | - | chr6_4:32827125-32827144 | None:intergenic | 45.0% | |
| CCAAAGTTGTCCATGATAGC+TGG | + | chr6_4:32827122-32827141 | Msa0985770:CDS | 45.0% | |
| AACCAAGATCCCAGCTATCA+TGG | - | chr6_4:32827135-32827154 | None:intergenic | 45.0% | |
| ACAAGCTGCTGTGAAACCAA+AGG | - | chr6_4:32827173-32827192 | None:intergenic | 45.0% | |
| !!! | TATGAATTTTTATATTTTTA+CGG | - | chr6_4:32825730-32825749 | None:intergenic | 5.0% |
| !!! | TAAAAAATTCTAATTTTTTT+TGG | + | chr6_4:32825767-32825786 | Msa0985770:intron | 5.0% |
| !!! | AAAAAATTCTAATTTTTTTT+GGG | + | chr6_4:32825768-32825787 | Msa0985770:intron | 5.0% |
| !! | AAAAAAACTATTAAAATTAA+GGG | - | chr6_4:32825988-32826007 | None:intergenic | 5.0% |
| !! | TAAAAAAACTATTAAAATTA+AGG | - | chr6_4:32825989-32826008 | None:intergenic | 5.0% |
| !!! | TATGAATTTTTATATTTTTA+CGG | - | chr6_4:32825730-32825749 | None:intergenic | 5.0% |
| !!! | TAAAAAATTCTAATTTTTTT+TGG | + | chr6_4:32825767-32825786 | Msa0985770:intron | 5.0% |
| !!! | AAAAAATTCTAATTTTTTTT+GGG | + | chr6_4:32825768-32825787 | Msa0985770:intron | 5.0% |
| !! | AAAAAAACTATTAAAATTAA+GGG | - | chr6_4:32825988-32826007 | None:intergenic | 5.0% |
| !! | TAAAAAAACTATTAAAATTA+AGG | - | chr6_4:32825989-32826008 | None:intergenic | 5.0% |
| CAGCTCAAATATCCAGCACC+AGG | + | chr6_4:32826435-32826454 | Msa0985770:intron | 50.0% | |
| GTGGGCTTGATCATGGAACA+TGG | + | chr6_4:32826535-32826554 | Msa0985770:CDS | 50.0% | |
| CACACTGGTATATCAGCCTC+TGG | - | chr6_4:32826582-32826601 | None:intergenic | 50.0% | |
| GGTGTTCTGATACTCGGATC+CGG | + | chr6_4:32826681-32826700 | Msa0985770:CDS | 50.0% | |
| ! | CCTGTTCTGAGTGGCATTTC+CGG | - | chr6_4:32826703-32826722 | None:intergenic | 50.0% |
| AATTCAACAGCCCAGGGATG+AGG | - | chr6_4:32826753-32826772 | None:intergenic | 50.0% | |
| AGAAGGCCCCATATGCAAAG+TGG | + | chr6_4:32827029-32827048 | Msa0985770:CDS | 50.0% | |
| GAAGGCCCCATATGCAAAGT+GGG | + | chr6_4:32827030-32827049 | Msa0985770:CDS | 50.0% | |
| GGATGAGCCCACTTTGCATA+TGG | - | chr6_4:32827040-32827059 | None:intergenic | 50.0% | |
| ! | ATGCAAAGTGGGCTCATCCA+TGG | + | chr6_4:32827041-32827060 | Msa0985770:CDS | 50.0% |
| GCTCCCATAGCTACATGCAA+TGG | - | chr6_4:32827082-32827101 | None:intergenic | 50.0% | |
| GTCCATGATAGCTGGGATCT+TGG | + | chr6_4:32827130-32827149 | Msa0985770:CDS | 50.0% | |
| CAGCTCAAATATCCAGCACC+AGG | + | chr6_4:32826435-32826454 | Msa0985770:intron | 50.0% | |
| GTGGGCTTGATCATGGAACA+TGG | + | chr6_4:32826535-32826554 | Msa0985770:CDS | 50.0% | |
| CACACTGGTATATCAGCCTC+TGG | - | chr6_4:32826582-32826601 | None:intergenic | 50.0% | |
| GGTGTTCTGATACTCGGATC+CGG | + | chr6_4:32826681-32826700 | Msa0985770:CDS | 50.0% | |
| ! | CCTGTTCTGAGTGGCATTTC+CGG | - | chr6_4:32826703-32826722 | None:intergenic | 50.0% |
| AATTCAACAGCCCAGGGATG+AGG | - | chr6_4:32826753-32826772 | None:intergenic | 50.0% | |
| AGAAGGCCCCATATGCAAAG+TGG | + | chr6_4:32827029-32827048 | Msa0985770:CDS | 50.0% | |
| GAAGGCCCCATATGCAAAGT+GGG | + | chr6_4:32827030-32827049 | Msa0985770:CDS | 50.0% | |
| GGATGAGCCCACTTTGCATA+TGG | - | chr6_4:32827040-32827059 | None:intergenic | 50.0% | |
| ! | ATGCAAAGTGGGCTCATCCA+TGG | + | chr6_4:32827041-32827060 | Msa0985770:CDS | 50.0% |
| GCTCCCATAGCTACATGCAA+TGG | - | chr6_4:32827082-32827101 | None:intergenic | 50.0% | |
| GTCCATGATAGCTGGGATCT+TGG | + | chr6_4:32827130-32827149 | Msa0985770:CDS | 50.0% | |
| !! | GCAAGCGTTGGTGTACCATG+TGG | - | chr6_4:32825159-32825178 | None:intergenic | 55.0% |
| CTTCCCCAGCAGCTTGAACA+AGG | + | chr6_4:32825338-32825357 | Msa0985770:CDS | 55.0% | |
| ! | AACTTTGGTGCACCTGGTGC+TGG | - | chr6_4:32826450-32826469 | None:intergenic | 55.0% |
| CCGGAAATGCCACTCAGAAC+AGG | + | chr6_4:32826700-32826719 | Msa0985770:CDS | 55.0% | |
| CATGTAGCTATGGGAGCTGC+TGG | + | chr6_4:32827085-32827104 | Msa0985770:CDS | 55.0% | |
| !! | GCAAGCGTTGGTGTACCATG+TGG | - | chr6_4:32825159-32825178 | None:intergenic | 55.0% |
| CTTCCCCAGCAGCTTGAACA+AGG | + | chr6_4:32825338-32825357 | Msa0985770:CDS | 55.0% | |
| ! | AACTTTGGTGCACCTGGTGC+TGG | - | chr6_4:32826450-32826469 | None:intergenic | 55.0% |
| CCGGAAATGCCACTCAGAAC+AGG | + | chr6_4:32826700-32826719 | Msa0985770:CDS | 55.0% | |
| CATGTAGCTATGGGAGCTGC+TGG | + | chr6_4:32827085-32827104 | Msa0985770:CDS | 55.0% | |
| ! | CGAAGCGTCTGGGTTGAGTC+AGG | + | chr6_4:32826494-32826513 | Msa0985770:CDS | 60.0% |
| CGAAAGCCCTCCTCATCCCT+GGG | + | chr6_4:32826740-32826759 | Msa0985770:CDS | 60.0% | |
| CAACAGCCCAGGGATGAGGA+GGG | - | chr6_4:32826749-32826768 | None:intergenic | 60.0% | |
| TCAACAGCCCAGGGATGAGG+AGG | - | chr6_4:32826750-32826769 | None:intergenic | 60.0% | |
| ! | CGAAGCGTCTGGGTTGAGTC+AGG | + | chr6_4:32826494-32826513 | Msa0985770:CDS | 60.0% |
| CGAAAGCCCTCCTCATCCCT+GGG | + | chr6_4:32826740-32826759 | Msa0985770:CDS | 60.0% | |
| CAACAGCCCAGGGATGAGGA+GGG | - | chr6_4:32826749-32826768 | None:intergenic | 60.0% | |
| TCAACAGCCCAGGGATGAGG+AGG | - | chr6_4:32826750-32826769 | None:intergenic | 60.0% | |
| GGATGAGGAGGGCTTTCGCG+AGG | - | chr6_4:32826738-32826757 | None:intergenic | 65.0% | |
| GCGAAAGCCCTCCTCATCCC+TGG | + | chr6_4:32826739-32826758 | Msa0985770:CDS | 65.0% | |
| GGATGAGGAGGGCTTTCGCG+AGG | - | chr6_4:32826738-32826757 | None:intergenic | 65.0% | |
| GCGAAAGCCCTCCTCATCCC+TGG | + | chr6_4:32826739-32826758 | Msa0985770:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 32825129 | 32827198 | 32825129 | ID=Msa0985770;Name=Msa0985770 |
| chr6_4 | mRNA | 32825129 | 32827198 | 32825129 | ID=Msa0985770-mRNA-1;Parent=Msa0985770;Name=Msa0985770-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0|0|1|1|1|3|0|265 |
| chr6_4 | exon | 32825129 | 32825359 | 32825129 | ID=Msa0985770-mRNA-1:exon:8680;Parent=Msa0985770-mRNA-1 |
| chr6_4 | exon | 32826438 | 32826808 | 32826438 | ID=Msa0985770-mRNA-1:exon:8681;Parent=Msa0985770-mRNA-1 |
| chr6_4 | exon | 32827003 | 32827198 | 32827003 | ID=Msa0985770-mRNA-1:exon:8682;Parent=Msa0985770-mRNA-1 |
| chr6_4 | CDS | 32825129 | 32825359 | 32825129 | ID=Msa0985770-mRNA-1:cds;Parent=Msa0985770-mRNA-1 |
| chr6_4 | CDS | 32826438 | 32826808 | 32826438 | ID=Msa0985770-mRNA-1:cds;Parent=Msa0985770-mRNA-1 |
| chr6_4 | CDS | 32827003 | 32827198 | 32827003 | ID=Msa0985770-mRNA-1:cds;Parent=Msa0985770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
